AM474_RS29970 3d2e967888b740af6617243ff968c642 872 Pfam PF00577 Outer membrane usher protein 197 771 8.1E-143 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29970 3d2e967888b740af6617243ff968c642 872 SUPERFAMILY SSF141729 34 157 2.75E-28 T 29-03-2018 AM474_RS29970 3d2e967888b740af6617243ff968c642 872 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 312 322 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM474_RS29970 3d2e967888b740af6617243ff968c642 872 Pfam PF13953 PapC C-terminal domain 780 843 4.8E-21 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM474_RS29970 3d2e967888b740af6617243ff968c642 872 Pfam PF13954 PapC N-terminal domain 35 179 3.8E-40 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM474_RS00435 c2e78e943c68777c00ac7766e58cf65d 191 SUPERFAMILY SSF54427 24 191 3.98E-40 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS00435 c2e78e943c68777c00ac7766e58cf65d 191 Pfam PF00866 Ring hydroxylating beta subunit 39 182 9.5E-34 T 29-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM474_RS00435 c2e78e943c68777c00ac7766e58cf65d 191 Gene3D G3DSA:3.10.450.50 23 191 7.0E-29 T 29-03-2018 AM474_RS29820 80eaa3b0019f710a505444be4c0e81e4 491 Pfam PF00743 Flavin-binding monooxygenase-like 12 345 9.9E-20 T 29-03-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AM474_RS29820 80eaa3b0019f710a505444be4c0e81e4 491 Gene3D G3DSA:3.50.50.60 12 166 3.0E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29820 80eaa3b0019f710a505444be4c0e81e4 491 Gene3D G3DSA:3.50.50.60 167 491 4.4E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29820 80eaa3b0019f710a505444be4c0e81e4 491 SUPERFAMILY SSF51905 10 249 1.48E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29820 80eaa3b0019f710a505444be4c0e81e4 491 SUPERFAMILY SSF51905 283 487 1.62E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.6E-29 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF54534 82 157 2.09E-24 T 29-03-2018 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 2.6E-28 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 PIRSF PIRSF006092 1 158 1.3E-52 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:1.10.287.180 3 76 5.5E-31 T 29-03-2018 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 Gene3D G3DSA:3.10.50.30 77 158 1.6E-26 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.3E-57 T 29-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.903 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM474_RS19460 1a023b65d9a9021d5826c3be752dca2c 158 SUPERFAMILY SSF46557 3 78 1.02E-27 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 7.4E-8 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:2.40.30.10 2 96 1.1E-18 T 29-03-2018 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF63380 3 99 2.33E-27 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 SUPERFAMILY SSF52343 102 256 1.44E-42 T 29-03-2018 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.4E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 Gene3D G3DSA:3.40.50.80 97 258 3.2E-21 T 29-03-2018 AM474_RS06360 57e65bbd2cd27181b4c81fc4bfd275af 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 4.7E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 Pfam PF01738 Dienelactone hydrolase family 16 230 1.3E-46 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 SUPERFAMILY SSF53474 2 230 1.73E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 Gene3D G3DSA:3.40.50.1820 2 235 1.8E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 Pfam PF12680 SnoaL-like domain 249 357 6.3E-7 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 SUPERFAMILY SSF54427 238 380 2.15E-23 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS01260 98dfe3d5851e2e7908e0175bc05934d5 413 Gene3D G3DSA:3.10.450.50 237 378 1.6E-21 T 29-03-2018 AM474_RS08690 5ce9cedfed41de54a388ff1b0e969669 382 Pfam PF00155 Aminotransferase class I and II 27 379 9.6E-62 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS08690 5ce9cedfed41de54a388ff1b0e969669 382 Gene3D G3DSA:3.40.640.10 72 276 7.0E-59 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS08690 5ce9cedfed41de54a388ff1b0e969669 382 Gene3D G3DSA:3.90.1150.10 277 382 1.2E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS08690 5ce9cedfed41de54a388ff1b0e969669 382 SUPERFAMILY SSF53383 2 381 1.28E-103 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS08690 5ce9cedfed41de54a388ff1b0e969669 382 Gene3D G3DSA:3.90.1150.10 1 71 0.028 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 SMART SM00893 23 211 1.9E-67 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 PIRSF PIRSF000090 1 249 1.5E-82 T 29-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 29-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.5E-45 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 SUPERFAMILY SSF52402 1 244 9.77E-85 T 29-03-2018 AM474_RS03960 877d10a9cce719612d6e6b19019fec15 249 Gene3D G3DSA:3.40.50.620 1 248 2.4E-85 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 5 286 1.7E-143 T 29-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF13247 4Fe-4S dicluster domain 88 184 1.5E-24 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF12800 4Fe-4S binding domain 33 45 0.069 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 38 109 3.0E-21 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 149 253 6.4E-22 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 8 37 0.0013 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:3.30.70.20 110 148 2.1E-16 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 SUPERFAMILY SSF54862 24 265 2.62E-70 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 129 140 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Gene3D G3DSA:1.20.5.480 254 287 4.6E-22 T 29-03-2018 AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 Pfam PF09163 Formate dehydrogenase N, transmembrane 242 284 3.1E-23 T 29-03-2018 IPR015246 Formate dehydrogenase, transmembrane AM474_RS19170 66a3929bc35c474baff9112bb9cb5239 309 PIRSF PIRSF036298 1 304 2.2E-160 T 29-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 AM474_RS12390 cb787a167dc840e02f0dee4f891d3a84 192 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 13 178 1.8E-43 T 29-03-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 217 387 1.4E-33 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Gene3D G3DSA:1.10.150.210 228 274 2.4E-24 T 29-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Gene3D G3DSA:3.40.50.1000 275 420 2.7E-27 T 29-03-2018 IPR023214 HAD-like domain AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Pfam PF13740 ACT domain 28 104 2.4E-26 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Gene3D G3DSA:3.30.70.260 25 120 3.0E-15 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 202 420 1.2E-79 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Gene3D G3DSA:3.30.70.260 121 213 2.4E-19 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 SUPERFAMILY SSF55021 27 108 1.6E-14 T 29-03-2018 AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 SUPERFAMILY SSF56784 216 422 2.4E-52 T 29-03-2018 IPR023214 HAD-like domain AM474_RS18375 baa2b9faada1fc4fb25b51a4f42defc5 429 Pfam PF12710 haloacid dehalogenase-like hydrolase 218 385 3.6E-25 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 SUPERFAMILY SSF69279 48 221 1.06E-62 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 SUPERFAMILY SSF69279 229 400 6.29E-35 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 Gene3D G3DSA:2.40.50.230 407 489 1.6E-39 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS01280 79528e9062260cf542081d176d2b934f 726 Pfam PF05954 Phage late control gene D protein (GPD) 66 367 1.4E-102 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 59 543 2.5E-199 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS01280 79528e9062260cf542081d176d2b934f 726 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 48 561 6.0E-207 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS01280 79528e9062260cf542081d176d2b934f 726 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 566 589 5.4E-5 T 29-03-2018 IPR010609 Gp5, C-terminal AM474_RS01280 79528e9062260cf542081d176d2b934f 726 Gene3D G3DSA:3.55.50.10 135 226 6.3E-33 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 SUPERFAMILY SSF69255 402 489 3.92E-35 T 29-03-2018 AM474_RS01280 79528e9062260cf542081d176d2b934f 726 SUPERFAMILY SSF69349 479 697 1.29E-55 T 29-03-2018 AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 295 374 2.6E-17 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 SUPERFAMILY SSF52540 31 267 1.77E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 Gene3D G3DSA:3.40.50.300 29 258 1.7E-42 T 29-03-2018 AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 30 370 2.8E-174 T 29-03-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 Gene3D G3DSA:3.30.1220.10 263 374 7.4E-21 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 33 240 6.8E-59 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 SUPERFAMILY SSF90002 293 374 1.44E-19 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS03920 131c7b51deee54b2458fccf3d40eb82e 375 SMART SM00833 283 374 3.2E-8 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 Gene3D G3DSA:2.60.40.10 22 146 1.3E-32 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 Gene3D G3DSA:2.60.40.10 148 237 1.1E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 PRINTS PR00969 Pili chaperone signature 23 32 2.3E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 PRINTS PR00969 Pili chaperone signature 72 93 2.3E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 PRINTS PR00969 Pili chaperone signature 100 117 2.3E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 PRINTS PR00969 Pili chaperone signature 162 177 2.3E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 PRINTS PR00969 Pili chaperone signature 127 142 2.3E-28 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 228 5.5E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 SUPERFAMILY SSF49354 19 145 1.41E-36 T 29-03-2018 IPR008962 PapD-like AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 22 145 3.5E-37 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS29980 34f991d792553a3e1a4af386d24d3ef1 237 SUPERFAMILY SSF49584 139 231 1.7E-14 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS00875 f59b35d24b7c6bd272aebefa379b2494 101 SUPERFAMILY SSF75169 4 100 1.77E-24 T 29-03-2018 IPR027396 DsrEFH-like AM474_RS00875 f59b35d24b7c6bd272aebefa379b2494 101 Pfam PF04077 DsrH like protein 10 97 1.8E-23 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM474_RS00875 f59b35d24b7c6bd272aebefa379b2494 101 Gene3D G3DSA:3.40.1260.10 4 97 7.2E-19 T 29-03-2018 AM474_RS00875 f59b35d24b7c6bd272aebefa379b2494 101 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 5 100 5.1E-29 T 29-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 SMART SM00851 22 135 2.6E-59 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Gene3D G3DSA:3.40.50.1380 1 197 1.9E-74 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 535 2.0E-233 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 SUPERFAMILY SSF52335 10 197 4.45E-70 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Gene3D G3DSA:3.40.140.20 382 525 5.6E-54 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 535 44.548 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 466 6.0E-114 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Pfam PF02142 MGS-like domain 22 135 1.8E-27 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 PIRSF PIRSF000414 4 535 3.6E-215 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 SUPERFAMILY SSF53927 222 535 7.12E-127 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 Gene3D G3DSA:3.40.140.20 229 380 1.8E-46 T 29-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS18940 fdf3b97bf64794e3fb5b0b04cbda9bda 535 SMART SM00798 140 467 1.1E-204 T 29-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 Gene3D G3DSA:2.60.120.10 6 95 8.2E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 SUPERFAMILY SSF46689 210 257 3.36E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 Pfam PF02311 AraC-like ligand binding domain 24 120 4.7E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 Pfam PF12833 Helix-turn-helix domain 178 254 8.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 SUPERFAMILY SSF51182 14 177 3.85E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 207 249 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 SMART SM00342 172 253 1.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 Gene3D G3DSA:1.10.10.60 208 259 9.6E-12 T 29-03-2018 AM474_RS22990 6df597b28519fb2fb7649acdc74815c5 262 Gene3D G3DSA:1.10.10.60 153 207 3.7E-10 T 29-03-2018 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:1.10.10.10 3 93 2.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:3.40.190.10 186 271 1.7E-11 T 29-03-2018 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 Pfam PF03466 LysR substrate binding domain 90 292 6.3E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.9E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 SUPERFAMILY SSF46785 4 89 2.91E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 Gene3D G3DSA:3.40.190.10 94 185 8.9E-8 T 29-03-2018 AM474_RS15630 03887e040c2f4a6bc29996a7295e6d18 302 SUPERFAMILY SSF53850 89 294 4.71E-23 T 29-03-2018 AM474_RS16855 e9017eb61999ca8bcc08184b20ddb1d8 131 SUPERFAMILY SSF55174 8 103 1.81E-26 T 29-03-2018 AM474_RS16855 e9017eb61999ca8bcc08184b20ddb1d8 131 Pfam PF01479 S4 domain 9 54 1.4E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS16855 e9017eb61999ca8bcc08184b20ddb1d8 131 PIRSF PIRSF016821 6 131 1.5E-38 T 29-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 AM474_RS16855 e9017eb61999ca8bcc08184b20ddb1d8 131 SMART SM00363 9 72 5.9E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS16855 e9017eb61999ca8bcc08184b20ddb1d8 131 Gene3D G3DSA:3.10.290.10 2 105 3.2E-23 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS32100 99cca0803c169682f18a4833539e4a82 124 Gene3D G3DSA:2.60.120.10 3 104 8.2E-23 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS32100 99cca0803c169682f18a4833539e4a82 124 SUPERFAMILY SSF51182 5 110 3.66E-26 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS32100 99cca0803c169682f18a4833539e4a82 124 Pfam PF07883 Cupin domain 42 101 7.4E-13 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 Pfam PF00462 Glutaredoxin 12 69 5.3E-7 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 PRINTS PR00160 Glutaredoxin signature 52 65 3.9E-6 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 PRINTS PR00160 Glutaredoxin signature 11 29 3.9E-6 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 PRINTS PR00160 Glutaredoxin signature 66 79 3.9E-6 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 SUPERFAMILY SSF52833 4 78 8.34E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 Pfam PF07291 Methylamine utilisation protein MauE 121 242 2.0E-4 T 29-03-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 AM474_RS08315 ac70bcc5a07f76fdcf15c6003d42aa31 252 Gene3D G3DSA:3.40.30.10 5 86 5.3E-14 T 29-03-2018 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF53474 111 369 3.08E-59 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 173 8.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 202 215 8.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 229 8.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 PRINTS PR00111 Alpha/beta hydrolase fold signature 318 332 8.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:2.40.50.100 7 70 1.7E-12 T 29-03-2018 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 SUPERFAMILY SSF51230 3 92 2.36E-21 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00364 Biotin-requiring enzyme 6 76 2.8E-14 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Pfam PF00561 alpha/beta hydrolase fold 133 355 1.0E-25 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS10635 e6b2813c875b7abadfe54c9a0ecd0ab3 370 Gene3D G3DSA:3.40.50.1820 71 370 2.7E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 1.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 Gene3D G3DSA:3.40.50.2300 1 125 2.4E-35 T 29-03-2018 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 Gene3D G3DSA:1.10.10.10 126 211 1.1E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.3E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 SUPERFAMILY SSF52172 1 129 4.55E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 SMART SM00421 145 202 3.6E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 Pfam PF00072 Response regulator receiver domain 3 115 6.3E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 SMART SM00448 1 114 2.5E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29215 70bfb6a2a578c25934189d564c5b352b 225 SUPERFAMILY SSF46894 142 208 1.12E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Pfam PF02151 UvrB/uvrC motif 632 665 3.8E-9 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SMART SM00490 458 544 8.3E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Gene3D G3DSA:4.10.860.10 607 670 9.6E-15 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Gene3D G3DSA:3.40.50.300 230 414 4.2E-8 T 29-03-2018 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Gene3D G3DSA:3.40.50.300 9 195 1.6E-25 T 29-03-2018 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SMART SM00487 8 424 3.2E-30 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SUPERFAMILY SSF46600 626 667 1.7E-11 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 664 0.0 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Pfam PF12344 Ultra-violet resistance protein B 550 592 2.7E-22 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Pfam PF04851 Type III restriction enzyme, res subunit 11 118 5.8E-9 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SUPERFAMILY SSF52540 2 413 9.65E-139 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Pfam PF00271 Helicase conserved C-terminal domain 435 542 3.4E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 666 43.735 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SUPERFAMILY SSF52540 36 81 1.95E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 SUPERFAMILY SSF52540 457 579 1.95E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04945 9e60e0a0d28e87a59878757aa43a6174 670 Gene3D G3DSA:3.40.50.300 415 587 5.4E-32 T 29-03-2018 AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 SUPERFAMILY SSF56281 23 521 5.32E-155 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 SMART SM00849 122 344 5.1E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 Gene3D G3DSA:3.30.1050.10 523 652 1.7E-25 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 Pfam PF14864 Alkyl sulfatase C-terminal 529 652 2.0E-32 T 29-03-2018 IPR029229 Alkyl sulfatase, C-terminal AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 Pfam PF00753 Metallo-beta-lactamase superfamily 118 344 1.1E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 Gene3D G3DSA:3.60.15.10 95 388 5.9E-25 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 Pfam PF14863 Alkyl sulfatase dimerisation 381 519 1.4E-56 T 29-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 AM474_RS22340 deaac866d828325a8a7e0a2880aba9f0 658 SUPERFAMILY SSF55718 531 652 1.98E-34 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 171 1.5E-41 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Gene3D G3DSA:1.10.645.10 411 582 1.6E-32 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Gene3D G3DSA:1.10.645.10 205 410 7.2E-46 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 246 257 - T 29-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 43 170 3.1E-42 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 19 179 25.66 T 29-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 10 593 71.848 T 29-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 SUPERFAMILY SSF143243 18 223 4.58E-60 T 29-03-2018 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 323 593 2.3E-106 T 29-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 205 593 42.347 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 209 593 3.9E-172 T 29-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 99 154 1.0E-26 T 29-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01040 f7e72e4e6d8842b628980b50c71da063 593 SUPERFAMILY SSF56762 219 593 5.89E-123 T 29-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 Gene3D G3DSA:3.30.70.100 246 338 1.0E-20 T 29-03-2018 AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 Pfam PF00117 Glutamine amidotransferase class-I 31 215 6.6E-10 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 Gene3D G3DSA:3.40.50.880 5 240 9.8E-33 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 SUPERFAMILY SSF54909 245 344 2.15E-29 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 Pfam PF03992 Antibiotic biosynthesis monooxygenase 264 321 5.5E-7 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS30955 f5951dfdb1e72d0793d0343bfae39729 356 SUPERFAMILY SSF52317 9 238 2.75E-43 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 Gene3D G3DSA:3.90.226.10 14 287 3.1E-68 T 29-03-2018 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 6.0E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 6.0E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 6.0E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 6.0E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 6.0E-38 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 283 37.994 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 Pfam PF01039 Carboxyl transferase domain 98 242 4.5E-17 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 14 286 6.8E-133 T 29-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS04795 8ce4c28349bf87acf6b1918c73a18567 290 SUPERFAMILY SSF52096 27 285 6.53E-88 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 SUPERFAMILY SSF46689 202 250 3.54E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 SMART SM00342 166 248 9.1E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 Gene3D G3DSA:1.10.10.60 206 260 4.0E-9 T 29-03-2018 AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 244 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 Gene3D G3DSA:1.10.10.60 159 205 1.1E-12 T 29-03-2018 AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 Gene3D G3DSA:2.60.120.10 3 158 5.1E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 SUPERFAMILY SSF51182 7 173 1.27E-19 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS09390 84d107868b0eb6eea78009c2ac92fc37 262 Pfam PF12833 Helix-turn-helix domain 175 250 6.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05705 f2155a42efe28ba921b6de03b95d6fe2 438 Gene3D G3DSA:2.40.160.10 25 438 1.6E-65 T 29-03-2018 AM474_RS05705 f2155a42efe28ba921b6de03b95d6fe2 438 SUPERFAMILY SSF56935 49 246 1.28E-27 T 29-03-2018 AM474_RS05705 f2155a42efe28ba921b6de03b95d6fe2 438 SUPERFAMILY SSF56935 281 438 1.28E-27 T 29-03-2018 AM474_RS05705 f2155a42efe28ba921b6de03b95d6fe2 438 Pfam PF07396 Phosphate-selective porin O and P 53 438 7.5E-108 T 29-03-2018 IPR010870 Phosphate-selective porin O/P AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 SUPERFAMILY SSF69349 449 631 2.2E-40 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 511 4.3E-122 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 SUPERFAMILY SSF69279 10 184 1.02E-56 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 2.2E-202 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 SUPERFAMILY SSF69279 191 371 1.11E-41 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 1.8E-77 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 SUPERFAMILY SSF69255 371 459 8.11E-34 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 Gene3D G3DSA:3.55.50.10 95 188 2.0E-31 T 29-03-2018 AM474_RS06845 62e467657be746764c2d6e9a8fa42453 808 Gene3D G3DSA:2.40.50.230 377 459 1.3E-38 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 SUPERFAMILY SSF88659 119 194 6.17E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 Pfam PF04542 Sigma-70 region 2 24 90 2.1E-12 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 SUPERFAMILY SSF88946 4 97 7.26E-23 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 Gene3D G3DSA:1.10.10.10 130 201 1.7E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 Pfam PF08281 Sigma-70, region 4 137 189 4.7E-11 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 Gene3D G3DSA:1.10.1740.10 1 129 5.6E-21 T 29-03-2018 AM474_RS05735 e6a6aa5fabfabbca0735e867c3e7befa 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 189 6.2E-24 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS10790 bc2e83b8ee9a32a063f58525300ba4b4 155 Gene3D G3DSA:3.10.180.10 43 155 2.3E-12 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS10790 bc2e83b8ee9a32a063f58525300ba4b4 155 SUPERFAMILY SSF54593 36 152 2.95E-14 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 Gene3D G3DSA:3.40.50.1470 1 194 6.1E-65 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 SUPERFAMILY SSF53178 5 191 1.57E-67 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 34.945 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 7.8E-52 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 3.3E-62 T 29-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM474_RS19945 9bdb13d2d4f8b63348e9de38646de5aa 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 29-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM474_RS05710 cf3941efdfbeea357e3a7a4bc7b64242 196 Pfam PF07681 DoxX 23 108 1.1E-22 T 29-03-2018 IPR032808 DoxX family AM474_RS30970 90cfd37d1d99332011d6e979c339effa 171 SUPERFAMILY SSF55729 1 138 6.18E-23 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS30970 90cfd37d1d99332011d6e979c339effa 171 Pfam PF13673 Acetyltransferase (GNAT) domain 52 139 1.6E-12 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS30970 90cfd37d1d99332011d6e979c339effa 171 Gene3D G3DSA:3.40.630.30 66 157 1.3E-18 T 29-03-2018 AM474_RS30970 90cfd37d1d99332011d6e979c339effa 171 Gene3D G3DSA:3.40.630.30 1 65 0.0023 T 29-03-2018 AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 SUPERFAMILY SSF46785 7 117 4.03E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:1.10.10.10 3 86 2.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 Pfam PF03466 LysR substrate binding domain 98 300 1.6E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 SUPERFAMILY SSF53850 101 302 3.26E-37 T 29-03-2018 AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:3.40.190.10 87 188 1.2E-17 T 29-03-2018 AM474_RS23655 dbb58f42d9452a48a1240a456ba8ff96 308 Gene3D G3DSA:3.40.190.10 189 276 2.6E-14 T 29-03-2018 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 SUPERFAMILY SSF52374 3 312 6.14E-102 T 29-03-2018 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.128 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 Gene3D G3DSA:3.40.50.620 1 305 1.5E-89 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 SUPERFAMILY SSF47323 316 458 1.26E-41 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 Gene3D G3DSA:1.20.120.640 306 393 1.4E-22 T 29-03-2018 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 4.0E-177 T 29-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.7E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.7E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.7E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.7E-30 T 29-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 2.1E-133 T 29-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 SMART SM00840 340 401 4.2E-27 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM474_RS28220 996fbe5438555a74d65a89ea927964e9 460 Pfam PF09190 DALR domain 340 401 4.5E-23 T 29-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 SUPERFAMILY SSF103473 14 438 2.22E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 Gene3D G3DSA:1.20.1250.20 242 439 2.4E-20 T 29-03-2018 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 13 412 5.0E-152 T 29-03-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 Gene3D G3DSA:1.20.1250.20 19 221 1.4E-39 T 29-03-2018 AM474_RS13610 ffc4a3dc51da6791dce08618c3b79e96 448 Pfam PF07690 Major Facilitator Superfamily 35 405 2.1E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 2.2E-46 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.6E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.6E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.6E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.6E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.6E-12 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 2.6E-45 T 29-03-2018 IPR032090 Peptide chain release factor 3, C-terminal AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Pfam PF03144 Elongation factor Tu domain 2 311 376 3.1E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF50447 259 390 5.08E-30 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.40.50.300 3 267 1.6E-35 T 29-03-2018 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF52540 8 274 3.83E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:2.40.30.10 268 381 1.0E-19 T 29-03-2018 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Gene3D G3DSA:3.30.70.870 385 462 1.4E-12 T 29-03-2018 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 526 8.5E-262 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 51.441 T 29-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.9E-16 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS09245 8b12186d5ac1500a2fdb3a153e39ab87 527 SUPERFAMILY SSF54980 390 465 5.76E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS06400 3d4d7f92c26c8228d21dd7d333f5246c 147 Pfam PF04343 Protein of unknown function, DUF488 12 132 8.9E-24 T 29-03-2018 IPR007438 Protein of unknown function DUF488 AM474_RS08220 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 36 158 4.53E-35 T 29-03-2018 IPR008972 Cupredoxin AM474_RS08220 253f266d749e160971437bb56bdbe070 463 ProSitePatterns PS00079 Multicopper oxidases signature 1. 435 455 - T 29-03-2018 IPR033138 Multicopper oxidases, conserved site AM474_RS08220 253f266d749e160971437bb56bdbe070 463 ProSitePatterns PS00080 Multicopper oxidases signature 2. 440 451 - T 29-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM474_RS08220 253f266d749e160971437bb56bdbe070 463 Pfam PF07732 Multicopper oxidase 57 159 1.7E-34 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM474_RS08220 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 160 279 1.16E-18 T 29-03-2018 IPR008972 Cupredoxin AM474_RS08220 253f266d749e160971437bb56bdbe070 463 Pfam PF07731 Multicopper oxidase 358 458 8.9E-25 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM474_RS08220 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 322 458 3.6E-32 T 29-03-2018 IPR008972 Cupredoxin AM474_RS08220 253f266d749e160971437bb56bdbe070 463 SUPERFAMILY SSF49503 322 457 1.34E-31 T 29-03-2018 IPR008972 Cupredoxin AM474_RS08220 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 28 156 1.4E-30 T 29-03-2018 IPR008972 Cupredoxin AM474_RS08220 253f266d749e160971437bb56bdbe070 463 Gene3D G3DSA:2.60.40.420 157 287 7.3E-15 T 29-03-2018 IPR008972 Cupredoxin AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 Gene3D G3DSA:3.40.50.720 1 140 2.7E-11 T 29-03-2018 AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 SUPERFAMILY SSF51735 13 139 2.01E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 PIRSF PIRSF017494 1 349 7.8E-119 T 29-03-2018 IPR010091 Thiazolinyl imide reductase AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 2 332 8.6E-145 T 29-03-2018 IPR010091 Thiazolinyl imide reductase AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 Gene3D G3DSA:3.30.360.10 141 277 2.1E-38 T 29-03-2018 AM474_RS10975 34993c3dffa3b8a2652cd90c44de235b 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 119 8.6E-14 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 4.3E-22 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 4.3E-22 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 4.3E-22 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 4.3E-22 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 4.3E-22 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 28 685 6.2E-292 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF81653 123 217 3.66E-20 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 ProSitePatterns PS01229 Hypothetical cof family signature 2. 524 546 - T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 538 5.5E-32 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Pfam PF00122 E1-E2 ATPase 121 293 1.0E-32 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF81665 47 116 3.92E-10 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF81665 218 309 3.92E-10 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 353 2.2E-30 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 385 606 9.7E-42 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:3.40.1110.10 326 451 3.8E-16 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:2.70.150.10 2 218 1.0E-21 T 29-03-2018 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF56784 385 568 2.68E-38 T 29-03-2018 IPR023214 HAD-like domain AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 SUPERFAMILY SSF56784 303 327 2.68E-38 T 29-03-2018 IPR023214 HAD-like domain AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 24 688 40.196 T 29-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 Gene3D G3DSA:3.40.50.1000 452 586 1.4E-33 T 29-03-2018 IPR023214 HAD-like domain AM474_RS27345 1ac5137f4ab9fcbe01b1316d5a894799 690 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 SUPERFAMILY SSF56059 120 386 3.33E-59 T 29-03-2018 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.30.470.20 198 393 2.9E-39 T 29-03-2018 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 8.7E-199 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 SUPERFAMILY SSF52440 3 112 1.73E-34 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.7E-4 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.40.50.20 2 122 4.4E-21 T 29-03-2018 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Gene3D G3DSA:3.30.1490.20 129 196 2.3E-19 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Pfam PF02222 ATP-grasp domain 123 295 1.0E-54 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM474_RS08125 fea1796a5090b97aeaf1f2dcebcba951 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 53.632 T 29-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82866 295 489 2.35E-48 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.2090.10 181 267 2.3E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:1.20.1640.10 785 1007 4.3E-42 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1430 41 141 3.4E-22 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82714 699 785 3.66E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:1.20.1640.10 288 501 2.6E-44 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82714 183 264 1.27E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-71 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 553 650 1.2E-15 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.70.1430 555 649 1.4E-5 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82866 783 1006 1.31E-43 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Gene3D G3DSA:3.30.2090.10 698 784 1.9E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 267 323 1.02E-19 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 137 181 1.02E-19 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 SUPERFAMILY SSF82693 42 130 7.67E-21 T 29-03-2018 AM474_RS10885 529c7c6fdc7032d780618106d9a0e841 1029 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.1E-269 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25470 23d8c2ef271bc6966365157c9d2e899b 245 Pfam PF02654 Cobalamin-5-phosphate synthase 11 241 7.0E-52 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25470 23d8c2ef271bc6966365157c9d2e899b 245 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 245 49.09 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25470 23d8c2ef271bc6966365157c9d2e899b 245 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 7 243 1.6E-40 T 29-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS05570 9b942543b796fa057b010a072febd14c 601 SUPERFAMILY SSF141868 27 260 3.14E-67 T 29-03-2018 IPR001633 EAL domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Gene3D G3DSA:3.30.70.270 417 599 4.4E-27 T 29-03-2018 AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Pfam PF00990 Diguanylate cyclase, GGDEF domain 425 521 3.7E-14 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Pfam PF00563 EAL domain 28 258 5.5E-56 T 29-03-2018 IPR001633 EAL domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 SMART SM00267 409 596 4.4E-7 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Pfam PF00571 CBS domain 297 342 2.7E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 510 2.3E-14 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 SUPERFAMILY SSF55073 426 591 1.26E-23 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS05570 9b942543b796fa057b010a072febd14c 601 SUPERFAMILY SSF54631 296 425 1.4E-10 T 29-03-2018 AM474_RS05570 9b942543b796fa057b010a072febd14c 601 SMART SM00052 21 263 1.4E-48 T 29-03-2018 IPR001633 EAL domain AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Gene3D G3DSA:3.10.580.10 293 416 5.0E-11 T 29-03-2018 AM474_RS05570 9b942543b796fa057b010a072febd14c 601 Gene3D G3DSA:3.20.20.450 13 277 5.8E-71 T 29-03-2018 IPR001633 EAL domain AM474_RS21875 2766047f521b83bc11e5abd356762c09 496 Pfam PF05872 Bacterial protein of unknown function (DUF853) 9 495 1.8E-227 T 29-03-2018 IPR033186 Helicase HerA-like C-terminal AM474_RS21875 2766047f521b83bc11e5abd356762c09 496 SMART SM00382 25 331 5.9E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS21875 2766047f521b83bc11e5abd356762c09 496 Gene3D G3DSA:3.40.50.300 4 346 2.8E-24 T 29-03-2018 AM474_RS21875 2766047f521b83bc11e5abd356762c09 496 SUPERFAMILY SSF52540 7 386 1.67E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.30.30.30 119 195 1.0E-29 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01382 124 252 1.5E-90 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50104 127 272 1.32E-60 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 PIRSF PIRSF002158 12 273 1.6E-100 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:4.10.950.10 197 273 3.1E-35 T 29-03-2018 IPR014726 Ribosomal protein L2, domain 3 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 29-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 SMART SM01383 42 118 1.3E-43 T 29-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.7E-128 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Gene3D G3DSA:2.40.50.140 1 114 2.2E-46 T 29-03-2018 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.774 T 29-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.1E-32 T 29-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 8.4E-56 T 29-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11155 3a8202fe29993bc194e7292d6f7d4d8e 273 SUPERFAMILY SSF50249 2 125 1.27E-47 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.90.1150.10 275 415 2.6E-59 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 SUPERFAMILY SSF53383 6 416 4.13E-182 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 PIRSF PIRSF000412 2 417 4.9E-168 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 Pfam PF00464 Serine hydroxymethyltransferase 9 385 9.4E-183 T 29-03-2018 AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 Gene3D G3DSA:3.40.640.10 37 274 6.5E-52 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS20325 41419f0a17d2118e5154ebe144f75cad 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 53.164 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS20860 9c571862d631afc7e61bff30207f6269 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 70 2.1E-13 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM474_RS20860 9c571862d631afc7e61bff30207f6269 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 9.2E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS20860 9c571862d631afc7e61bff30207f6269 303 SUPERFAMILY SSF161098 94 281 5.63E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS20860 9c571862d631afc7e61bff30207f6269 303 Gene3D G3DSA:1.10.3720.10 21 288 6.2E-44 T 29-03-2018 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 5.4E-45 T 29-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Pfam PF00403 Heavy-metal-associated domain 25 85 7.8E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 SUPERFAMILY SSF55008 17 89 1.23E-22 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26255 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Gene3D G3DSA:3.30.70.100 20 91 1.8E-24 T 29-03-2018 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 3.3E-58 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 91 5.4E-45 T 29-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Pfam PF00403 Heavy-metal-associated domain 25 85 7.8E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 SUPERFAMILY SSF55008 17 89 1.23E-22 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS01770 6dcfeae12c67bd8e0efcc9169ccaf92d 91 Gene3D G3DSA:3.30.70.100 20 91 1.8E-24 T 29-03-2018 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 143 284 6.41E-49 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 150 283 3.0E-45 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 1.2E-95 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Pfam PF00889 Elongation factor TS 73 267 7.1E-59 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF54713 56 141 6.21E-14 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:1.10.8.10 1 56 4.3E-21 T 29-03-2018 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Gene3D G3DSA:3.30.479.20 58 149 9.2E-10 T 29-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 29-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 SUPERFAMILY SSF46934 3 56 2.35E-16 T 29-03-2018 IPR009060 UBA-like GO:0005515 AM474_RS07635 0e61d3c224c2e4355dcfb03a9ba40d2f 289 Hamap MF_00050 Elongation factor Ts [tsf]. 1 284 72.415 T 29-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS05675 0ec8373baf9bb690b26aef2fb6b9b234 109 SUPERFAMILY SSF103481 6 106 1.16E-7 T 29-03-2018 AM474_RS05675 0ec8373baf9bb690b26aef2fb6b9b234 109 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 106 1.4E-27 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM474_RS05675 0ec8373baf9bb690b26aef2fb6b9b234 109 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 22.672 T 29-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 SUPERFAMILY SSF46955 4 108 3.3E-16 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 8.2E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 9.1E-63 T 29-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 Gene3D G3DSA:1.10.1660.10 1 121 6.5E-18 T 29-03-2018 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 SMART SM00422 4 73 5.0E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01785 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 SUPERFAMILY SSF46955 4 108 3.3E-16 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 8.2E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 9.1E-63 T 29-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 Gene3D G3DSA:1.10.1660.10 1 121 6.5E-18 T 29-03-2018 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 SMART SM00422 4 73 5.0E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26240 907d0dfdb0d250508a9ca6da29d30f3a 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.0E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01895 bb43ecda0a8b9a1af4119ee2b2767ecd 252 SUPERFAMILY SSF56784 4 233 8.95E-17 T 29-03-2018 IPR023214 HAD-like domain AM474_RS01895 bb43ecda0a8b9a1af4119ee2b2767ecd 252 Gene3D G3DSA:3.40.50.1000 6 243 2.4E-8 T 29-03-2018 IPR023214 HAD-like domain AM474_RS01895 bb43ecda0a8b9a1af4119ee2b2767ecd 252 PIRSF PIRSF030802 3 252 1.0E-65 T 29-03-2018 IPR024197 Uncharacterised conserved protein UCP030802 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 SMART SM00421 838 895 5.9E-27 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 855 882 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 Gene3D G3DSA:3.40.50.300 24 183 2.7E-8 T 29-03-2018 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 Gene3D G3DSA:1.25.40.10 615 807 1.8E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 SUPERFAMILY SSF46894 834 900 7.82E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 SUPERFAMILY SSF52540 131 232 3.77E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 SUPERFAMILY SSF52540 32 101 3.77E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 841 895 3.7E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 871 883 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 855 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 871 4.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28025 637c250505a1dc5ef516e54b70a32c20 901 Gene3D G3DSA:1.10.10.10 808 901 1.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15015 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 171 317 3.6E-45 T 29-03-2018 AM474_RS15015 c3d49b8ad11e0c91833513e974b2278b 319 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 315 2.3E-117 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM474_RS15015 c3d49b8ad11e0c91833513e974b2278b 319 Gene3D G3DSA:3.40.190.10 23 170 3.7E-18 T 29-03-2018 AM474_RS15015 c3d49b8ad11e0c91833513e974b2278b 319 SUPERFAMILY SSF53850 26 317 2.32E-75 T 29-03-2018 AM474_RS15015 c3d49b8ad11e0c91833513e974b2278b 319 Pfam PF16868 NMT1-like family 31 315 8.9E-97 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Pfam PF12801 4Fe-4S binding domain 93 125 1.0E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 39 468 7.4E-177 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:3.30.70.20 273 283 0.15 T 29-03-2018 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:2.60.40.10 352 469 1.8E-26 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 SUPERFAMILY SSF54862 103 125 7.53E-32 T 29-03-2018 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 SUPERFAMILY SSF54862 172 352 7.53E-32 T 29-03-2018 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:3.30.70.20 220 272 6.5E-12 T 29-03-2018 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 352 468 5.7E-27 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Gene3D G3DSA:3.30.70.20 284 325 0.0018 T 29-03-2018 AM474_RS26885 523296e87c36413c827d03aa1db6acd4 471 Pfam PF13746 4Fe-4S dicluster domain 217 322 1.2E-45 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.50.30.10 539 669 1.2E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.20.20.60 708 929 4.5E-73 T 29-03-2018 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF55804 148 274 8.89E-17 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 576 587 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF55804 4 141 4.71E-35 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 685 704 9.5E-19 T 29-03-2018 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 850 865 9.5E-19 T 29-03-2018 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 833 848 9.5E-19 T 29-03-2018 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 886 898 9.5E-19 T 29-03-2018 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 1.0E-26 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 148 274 2.8E-5 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.30.1340.10 284 368 2.9E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF47831 430 537 2.09E-23 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 406 952 4.9E-143 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF55594 285 372 4.97E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.40.930.10 3 142 4.4E-26 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.40.930.10 143 277 8.2E-7 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF51621 646 926 1.43E-99 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 SUPERFAMILY SSF52009 519 634 5.1E-31 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF00391 PEP-utilising enzyme, mobile domain 545 617 8.4E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 833 851 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 646 927 7.3E-103 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:1.10.274.10 426 538 2.9E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF05524 PEP-utilising enzyme, N-terminal 405 520 1.0E-20 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Pfam PF00381 PTS HPr component phosphorylation site 285 365 1.4E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 364 9.4E-14 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR00107 Phosphocarrier protein signature 337 354 6.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR00107 Phosphocarrier protein signature 294 310 6.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 PRINTS PR00107 Phosphocarrier protein signature 322 337 6.4E-8 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS07140 0476d4617bdced06a973e56bbe4bddae 956 Gene3D G3DSA:3.20.20.60 670 707 1.4E-11 T 29-03-2018 AM474_RS06940 c891194403588a97942947d62c9aa90a 385 Gene3D G3DSA:1.10.287.470 117 165 1.3E-7 T 29-03-2018 AM474_RS06940 c891194403588a97942947d62c9aa90a 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 286 7.8E-19 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS06940 c891194403588a97942947d62c9aa90a 385 SUPERFAMILY SSF111369 50 293 1.83E-65 T 29-03-2018 AM474_RS06940 c891194403588a97942947d62c9aa90a 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 358 8.2E-79 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS06940 c891194403588a97942947d62c9aa90a 385 Gene3D G3DSA:2.40.50.100 61 116 5.7E-11 T 29-03-2018 AM474_RS06940 c891194403588a97942947d62c9aa90a 385 Gene3D G3DSA:2.40.50.100 166 384 3.4E-5 T 29-03-2018 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 Gene3D G3DSA:1.10.10.60 253 303 1.1E-15 T 29-03-2018 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 Gene3D G3DSA:2.60.120.280 16 183 7.7E-21 T 29-03-2018 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 SMART SM00342 213 296 5.6E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 SUPERFAMILY SSF46689 249 298 7.62E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 Pfam PF12833 Helix-turn-helix domain 219 298 1.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 SUPERFAMILY SSF46689 196 245 9.43E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 Gene3D G3DSA:1.10.10.60 195 252 2.6E-11 T 29-03-2018 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 Pfam PF02311 AraC-like ligand binding domain 17 173 3.7E-37 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS11865 bb4823abfa8c211bcda4d3202a98ac80 303 SUPERFAMILY SSF51182 27 81 9.49E-8 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25980 81321b00a574ad4e8d0315e0b0cfd1eb 168 SUPERFAMILY SSF46785 6 143 2.89E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25980 81321b00a574ad4e8d0315e0b0cfd1eb 168 Gene3D G3DSA:1.10.10.10 1 168 3.0E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25980 81321b00a574ad4e8d0315e0b0cfd1eb 168 Pfam PF01638 HxlR-like helix-turn-helix 20 105 9.1E-19 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF46689 358 440 5.82E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF00158 Sigma-54 interaction domain 146 312 2.7E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 SMART SM00382 166 328 6.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:1.10.8.60 318 397 2.5E-21 T 29-03-2018 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 SMART SM00448 5 116 2.5E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 4.4E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 4.4E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:3.40.50.300 141 317 1.4E-27 T 29-03-2018 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF52172 3 191 5.83E-44 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:3.40.50.2300 1 140 2.1E-34 T 29-03-2018 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF00072 Response regulator receiver domain 7 115 4.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Gene3D G3DSA:1.10.10.60 398 441 7.9E-13 T 29-03-2018 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 Pfam PF02954 Bacterial regulatory protein, Fis family 398 438 3.5E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS25750 d98c965a1dfc4ba3fea59828aecb26e3 441 SUPERFAMILY SSF52540 146 375 4.83E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27140 98eee95d13f6c71c04557d5c1f5a1334 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 112 8.0E-12 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS27140 98eee95d13f6c71c04557d5c1f5a1334 157 Gene3D G3DSA:3.10.129.10 1 141 7.2E-22 T 29-03-2018 AM474_RS27140 98eee95d13f6c71c04557d5c1f5a1334 157 SUPERFAMILY SSF54637 1 139 3.74E-26 T 29-03-2018 IPR029069 HotDog domain AM474_RS27140 98eee95d13f6c71c04557d5c1f5a1334 157 Pfam PF03061 Thioesterase superfamily 52 127 1.5E-9 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 SUPERFAMILY SSF51726 400 761 1.83E-120 T 29-03-2018 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 Gene3D G3DSA:3.20.20.210 394 763 3.8E-131 T 29-03-2018 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 Gene3D G3DSA:3.20.20.210 2 393 3.2E-148 T 29-03-2018 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 317 4.0E-118 T 29-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 PIRSF PIRSF000382 1 765 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 435 757 6.7E-154 T 29-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 762 37.545 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 SUPERFAMILY SSF51726 3 398 9.94E-116 T 29-03-2018 AM474_RS28950 5ba3ac03ced6d2043d507fa6495d1efd 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 760 0.0 T 29-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 3 202 1.2E-66 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 SUPERFAMILY SSF160467 3 96 1.96E-16 T 29-03-2018 AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 Gene3D G3DSA:3.30.1360.40 1 87 6.3E-17 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 SUPERFAMILY SSF50891 91 218 5.69E-41 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 SMART SM00796 2 202 2.4E-92 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 Gene3D G3DSA:2.40.100.10 89 220 4.5E-46 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS20830 6600bf64bfb8f4cacac7fcbdcd6d0700 225 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 9.3E-48 T 29-03-2018 IPR010016 KipI family AM474_RS26585 a8f3a1c2daabeec968d9599383441cca 332 Pfam PF13531 Bacterial extracellular solute-binding protein 31 280 7.7E-41 T 29-03-2018 AM474_RS26585 a8f3a1c2daabeec968d9599383441cca 332 SUPERFAMILY SSF53850 22 329 3.76E-83 T 29-03-2018 AM474_RS26585 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 131 331 2.3E-44 T 29-03-2018 AM474_RS26585 a8f3a1c2daabeec968d9599383441cca 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 23 328 6.4E-133 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM474_RS26585 a8f3a1c2daabeec968d9599383441cca 332 Gene3D G3DSA:3.40.190.10 27 130 8.3E-16 T 29-03-2018 AM474_RS10320 7420fb900248378c2306794b899100b9 253 SUPERFAMILY SSF51735 5 245 1.75E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10320 7420fb900248378c2306794b899100b9 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS10320 7420fb900248378c2306794b899100b9 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 5.0E-5 T 29-03-2018 AM474_RS10320 7420fb900248378c2306794b899100b9 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 7.5E-62 T 29-03-2018 AM474_RS10320 7420fb900248378c2306794b899100b9 253 Gene3D G3DSA:3.40.50.720 42 250 3.1E-63 T 29-03-2018 AM474_RS10320 7420fb900248378c2306794b899100b9 253 Gene3D G3DSA:3.40.50.720 1 41 9.2E-11 T 29-03-2018 AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.4E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10320 7420fb900248378c2306794b899100b9 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 Gene3D G3DSA:3.40.1010.10 9 119 3.4E-14 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 SUPERFAMILY SSF53790 10 210 2.88E-36 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 198 5.5E-42 T 29-03-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 SUPERFAMILY SSF53335 210 385 3.22E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 Gene3D G3DSA:3.40.50.150 230 406 5.6E-28 T 29-03-2018 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 188 7.6E-17 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 236 357 2.9E-35 T 29-03-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 Gene3D G3DSA:3.30.950.10 120 217 1.9E-26 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03720 12f4229909502f2a42eb3f08f0e6f7ba 415 PIRSF PIRSF036428 7 407 5.6E-140 T 29-03-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 Pfam PF00582 Universal stress protein family 1 149 1.3E-32 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 SUPERFAMILY SSF52402 1 150 3.89E-34 T 29-03-2018 AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-20 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 109 121 1.4E-20 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 PRINTS PR01438 Universal stress protein signature 127 149 1.4E-20 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS05875 435bf2c8bd6046df6b5c8f11431d9c5b 151 Gene3D G3DSA:3.40.50.620 1 151 2.1E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS27955 2755af2505e318438ee9ca2f5c92e0a1 168 SMART SM00506 1 140 3.2E-5 T 29-03-2018 IPR002589 Macro domain AM474_RS27955 2755af2505e318438ee9ca2f5c92e0a1 168 SUPERFAMILY SSF52949 1 155 3.36E-32 T 29-03-2018 AM474_RS27955 2755af2505e318438ee9ca2f5c92e0a1 168 Pfam PF01661 Macro domain 28 137 4.0E-6 T 29-03-2018 IPR002589 Macro domain AM474_RS27955 2755af2505e318438ee9ca2f5c92e0a1 168 Gene3D G3DSA:3.40.220.10 1 156 7.1E-18 T 29-03-2018 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 Gene3D G3DSA:3.40.50.850 2 207 1.2E-46 T 29-03-2018 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 SUPERFAMILY SSF52499 3 207 6.67E-62 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 167 185 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 3 15 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 111 133 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 79 98 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 185 202 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 62 79 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 PIRSF PIRSF001111 2 207 7.2E-94 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS28810 9a0c0fd485c1dae168d87bc25b177f75 207 Pfam PF00857 Isochorismatase family 33 204 3.5E-35 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 Gene3D G3DSA:3.40.50.850 2 207 1.2E-46 T 29-03-2018 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 SUPERFAMILY SSF52499 3 207 6.67E-62 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 167 185 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 3 15 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 111 133 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 79 98 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 185 202 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PRINTS PR01398 Isochorismatase signature 62 79 4.1E-58 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 PIRSF PIRSF001111 2 207 7.2E-94 T 29-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 AM474_RS10920 9a0c0fd485c1dae168d87bc25b177f75 207 Pfam PF00857 Isochorismatase family 33 204 3.5E-35 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS26630 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.970 1 191 6.8E-48 T 29-03-2018 AM474_RS26630 0180254f306236110732afd51bb41882 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 29-03-2018 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 AM474_RS26630 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52518 3 184 2.4E-48 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS26630 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.970 374 582 9.4E-43 T 29-03-2018 AM474_RS26630 0180254f306236110732afd51bb41882 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 3.1E-35 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS26630 0180254f306236110732afd51bb41882 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 2.0E-51 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS26630 0180254f306236110732afd51bb41882 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 3.5E-33 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS26630 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52467 161 350 4.24E-48 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS26630 0180254f306236110732afd51bb41882 591 SUPERFAMILY SSF52518 369 567 3.13E-51 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS26630 0180254f306236110732afd51bb41882 591 Gene3D G3DSA:3.40.50.1220 192 373 1.7E-44 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 PRINTS PR00721 Stomatin signature 239 256 4.7E-16 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 PRINTS PR00721 Stomatin signature 283 301 4.7E-16 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 PRINTS PR00721 Stomatin signature 302 323 4.7E-16 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 PRINTS PR00721 Stomatin signature 204 225 4.7E-16 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 PRINTS PR00721 Stomatin signature 327 350 4.7E-16 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 SMART SM00244 148 307 6.4E-15 T 29-03-2018 IPR001107 Band 7 domain AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 Pfam PF01145 SPFH domain / Band 7 family 152 323 3.8E-22 T 29-03-2018 IPR001107 Band 7 domain AM474_RS20430 d93fdb5e29aa9fb1671f38afc82f1807 381 SUPERFAMILY SSF117892 187 313 9.02E-26 T 29-03-2018 IPR001107 Band 7 domain AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 SUPERFAMILY SSF56935 39 746 3.97E-133 T 29-03-2018 AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 746 2.8E-102 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 2.5E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 Pfam PF00593 TonB dependent receptor 284 744 3.3E-57 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 Gene3D G3DSA:2.170.130.10 45 181 2.5E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS01295 0a5afb9ac3f2aac52356bfd5f86b0e77 746 Gene3D G3DSA:2.40.170.20 182 746 1.2E-88 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS26635 07c4964980d1706293e9224e826bc650 143 SUPERFAMILY SSF143744 2 136 2.22E-34 T 29-03-2018 AM474_RS26635 07c4964980d1706293e9224e826bc650 143 Gene3D G3DSA:2.30.130.10 13 56 0.0065 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS26635 07c4964980d1706293e9224e826bc650 143 Pfam PF03928 Haem-degrading 4 133 8.3E-27 T 29-03-2018 IPR005624 Haem-degrading AM474_RS27085 c3d38432c869f0bcae47c84e815af0c5 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 120 3.3E-34 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM474_RS27085 c3d38432c869f0bcae47c84e815af0c5 122 Gene3D G3DSA:1.20.1300.10 1 122 7.9E-19 T 29-03-2018 AM474_RS27085 c3d38432c869f0bcae47c84e815af0c5 122 PIRSF PIRSF000169 1 122 1.4E-43 T 29-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM474_RS27085 c3d38432c869f0bcae47c84e815af0c5 122 SUPERFAMILY SSF81343 4 122 1.33E-27 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27085 c3d38432c869f0bcae47c84e815af0c5 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 113 9.1E-7 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.30.190.20 150 228 7.1E-21 T 29-03-2018 AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 34 220 9.1E-49 T 29-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.7E-102 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.014 T 29-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 SUPERFAMILY SSF56808 6 225 6.93E-79 T 29-03-2018 IPR023674 Ribosomal protein L1-like AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 PIRSF PIRSF002155 1 227 5.2E-75 T 29-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 Gene3D G3DSA:3.40.50.790 68 149 4.2E-32 T 29-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM474_RS11220 0a2ff9556c282ff99118ee66c0bdfec5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 29-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Gene3D G3DSA:1.10.1060.10 110 225 7.8E-4 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 652 1.7E-213 T 29-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SMART SM00926 221 275 1.4E-11 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SUPERFAMILY SSF53706 219 685 6.06E-86 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Pfam PF00384 Molybdopterin oxidoreductase 550 635 2.1E-10 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 3.5E-12 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 1.1E-14 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SUPERFAMILY SSF54862 81 213 1.17E-33 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Gene3D G3DSA:2.40.40.20 822 898 3.2E-6 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Gene3D G3DSA:3.40.50.740 294 709 1.7E-30 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SUPERFAMILY SSF50692 812 889 9.27E-8 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Gene3D G3DSA:2.20.25.90 226 280 8.4E-11 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 29-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 2.7E-10 T 29-03-2018 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 Gene3D G3DSA:3.10.20.30 1 92 2.2E-7 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SUPERFAMILY SSF54292 1 77 7.88E-19 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS01055 605dfd79db2898008566a09e600e0ea6 905 SMART SM00929 88 128 2.6E-19 T 29-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 Pfam PF03379 CcmB protein 6 219 9.6E-84 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.9E-70 T 29-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.5E-86 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM474_RS26495 2d1127d86759c50c8778dd454dd89053 223 PIRSF PIRSF002764 1 222 5.5E-81 T 29-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AM474_RS09165 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Gene3D G3DSA:1.10.3720.10 32 238 3.3E-24 T 29-03-2018 AM474_RS09165 e4ba4d3af2b595a13c763b8ff12e7d7d 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 230 7.8E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS09165 e4ba4d3af2b595a13c763b8ff12e7d7d 240 SUPERFAMILY SSF161098 37 221 4.32E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS19145 57d12964cd130070f6c9c17de2de2677 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 8 144 1.1E-40 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM474_RS23495 0a6006965c08a0c4de53526d00d4b529 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM474_RS23495 0a6006965c08a0c4de53526d00d4b529 91 Gene3D G3DSA:3.30.70.100 1 91 1.2E-27 T 29-03-2018 AM474_RS23495 0a6006965c08a0c4de53526d00d4b529 91 Pfam PF00708 Acylphosphatase 7 85 3.8E-24 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM474_RS23495 0a6006965c08a0c4de53526d00d4b529 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 29-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM474_RS23495 0a6006965c08a0c4de53526d00d4b529 91 SUPERFAMILY SSF54975 4 90 3.05E-26 T 29-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 276 8.1E-78 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 Pfam PF05175 Methyltransferase small domain 94 185 8.6E-15 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 270 3.2E-89 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 SUPERFAMILY SSF53335 12 272 1.13E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 Gene3D G3DSA:3.40.50.150 84 275 3.2E-41 T 29-03-2018 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 Gene3D G3DSA:1.10.8.10 4 83 4.4E-20 T 29-03-2018 AM474_RS19990 895f6555ecc86064af5f5f25b6f0fb68 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 274 46.499 T 29-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM474_RS22135 52b673f1b78d58b11c6e5df8803109cb 392 SUPERFAMILY SSF53850 25 391 2.99E-70 T 29-03-2018 AM474_RS22135 52b673f1b78d58b11c6e5df8803109cb 392 Gene3D G3DSA:3.40.190.10 117 312 1.6E-31 T 29-03-2018 AM474_RS22135 52b673f1b78d58b11c6e5df8803109cb 392 Pfam PF12849 PBP superfamily domain 19 336 3.3E-31 T 29-03-2018 IPR024370 PBP domain AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 1.9E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Gene3D G3DSA:1.20.140.10 216 375 5.5E-60 T 29-03-2018 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Gene3D G3DSA:2.40.110.10 119 215 1.2E-40 T 29-03-2018 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 SUPERFAMILY SSF47203 225 375 6.93E-58 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 SUPERFAMILY SSF56645 5 240 1.22E-84 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 PIRSF PIRSF016578 4 194 1.9E-13 T 29-03-2018 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 PIRSF PIRSF016578 217 375 1.3E-11 T 29-03-2018 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Gene3D G3DSA:1.10.540.10 3 118 6.0E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.6E-51 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00055 febda3ad695eece57bf10e2f37f94c4f 375 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 3.1E-27 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 Gene3D G3DSA:3.40.190.10 207 319 8.9E-22 T 29-03-2018 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 Gene3D G3DSA:3.90.76.10 66 206 3.2E-32 T 29-03-2018 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 Gene3D G3DSA:3.10.105.10 320 563 5.7E-51 T 29-03-2018 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 PIRSF PIRSF002741 17 596 3.3E-113 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 SUPERFAMILY SSF53850 51 592 6.21E-128 T 29-03-2018 AM474_RS28330 11cece04ab44928e9779e761ac204c36 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 508 2.9E-79 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 PIRSF PIRSF029347 1 387 2.8E-172 T 29-03-2018 IPR014555 RecF-like AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 241 348 1.6E-17 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 54 1.6E-6 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 SUPERFAMILY SSF52540 224 350 1.01E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 SUPERFAMILY SSF52540 1 100 1.01E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22580 211ab62f75f5884d8a8ea441d5ceaf0d 387 Gene3D G3DSA:3.40.50.300 11 366 4.6E-23 T 29-03-2018 AM474_RS12110 0c06c156cf8042f6f916762b45aacbd3 392 Pfam PF02239 Cytochrome D1 heme domain 25 386 1.1E-146 T 29-03-2018 AM474_RS12110 0c06c156cf8042f6f916762b45aacbd3 392 SUPERFAMILY SSF51004 26 390 8.37E-75 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM474_RS12110 0c06c156cf8042f6f916762b45aacbd3 392 Gene3D G3DSA:2.140.10.20 13 390 1.5E-54 T 29-03-2018 AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52518 16 231 8.57E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.970 13 223 5.7E-66 T 29-03-2018 AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 Gene3D G3DSA:3.40.50.920 224 349 9.0E-31 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 SUPERFAMILY SSF52922 218 348 2.88E-41 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 SMART SM00861 17 192 9.1E-68 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02780 Transketolase, C-terminal domain 224 340 2.4E-35 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM474_RS30850 5278680366a40c25a809e2a698f14b4e 350 Pfam PF02779 Transketolase, pyrimidine binding domain 16 191 2.8E-44 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SUPERFAMILY SSF52540 294 389 1.68E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SUPERFAMILY SSF52540 59 206 1.68E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 Gene3D G3DSA:3.40.50.300 731 1183 3.0E-24 T 29-03-2018 AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SMART SM00490 1077 1158 2.9E-5 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 Pfam PF00271 Helicase conserved C-terminal domain 1111 1158 9.8E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 Pfam PF09369 Domain of unknown function (DUF1998) 1643 1713 1.1E-11 T 29-03-2018 IPR018973 DEAD/DEAH-box helicase, putative AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 Pfam PF00270 DEAD/DEAH box helicase 99 187 1.1E-9 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SMART SM00487 93 417 2.7E-13 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SUPERFAMILY SSF52540 1076 1218 3.12E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 SUPERFAMILY SSF52540 115 178 3.12E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30620 8a9ec805de87eb0ddad4a6014032f1fe 1840 Gene3D G3DSA:3.40.50.300 63 403 1.5E-23 T 29-03-2018 AM474_RS00450 d261e060b3367fa9e5137dac5fae3443 527 Pfam PF01593 Flavin containing amine oxidoreductase 16 513 3.4E-15 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AM474_RS00450 d261e060b3367fa9e5137dac5fae3443 527 SUPERFAMILY SSF51905 1 331 2.02E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00450 d261e060b3367fa9e5137dac5fae3443 527 SUPERFAMILY SSF51905 473 515 2.02E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00450 d261e060b3367fa9e5137dac5fae3443 527 Gene3D G3DSA:3.50.50.60 1 517 7.7E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF52129 392 530 6.45E-6 T 29-03-2018 IPR029030 Caspase-like domain AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:3.40.50.1460 352 545 1.2E-22 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF01650 Peptidase C13 family 342 547 1.2E-43 T 29-03-2018 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 127 248 4.71E-25 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 80 127 6.9E-12 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 240 327 5.3E-13 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 128 183 2.4E-11 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 30 79 6.0E-12 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Gene3D G3DSA:2.20.110.10 184 239 7.2E-16 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 152 173 6.6 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 129 150 6.6 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 244 265 21.0 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 84 105 0.56 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 61 82 13.0 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 38 59 4.0 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 175 196 3.1 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 107 128 1.5 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 198 219 4.1E-5 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SMART SM00698 267 288 8.0 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 SUPERFAMILY SSF82185 35 122 2.09E-20 T 29-03-2018 AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 154 175 0.077 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 86 108 0.12 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 131 153 0.0073 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 63 85 2.1E-4 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 200 222 6.7E-6 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 40 60 0.039 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 224 245 0.32 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 109 124 0.88 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 269 291 0.038 T 29-03-2018 IPR003409 MORN motif AM474_RS09950 fb12f888e0ad57b10b97f92af8cf4762 579 Pfam PF02493 MORN repeat 177 199 2.8E-4 T 29-03-2018 IPR003409 MORN motif AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF46609 1 84 1.83E-36 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.8E-39 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 Gene3D G3DSA:1.10.287.990 20 82 2.2E-27 T 29-03-2018 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.6E-23 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.6E-23 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.6E-23 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.6E-23 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.6E-23 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 SUPERFAMILY SSF54719 81 192 9.17E-46 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.0E-35 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21570 4ce1178654a1b617a78254e9d2e847bd 193 PIRSF PIRSF000349 1 193 4.3E-87 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 189 1.7E-30 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 Gene3D G3DSA:1.10.10.10 108 193 2.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28120 104f6655893989db172328c7972d8cfd 196 SUPERFAMILY SSF88946 15 122 2.04E-27 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 Gene3D G3DSA:1.10.1740.10 13 107 1.3E-26 T 29-03-2018 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 Pfam PF04545 Sigma-70, region 4 139 188 9.9E-12 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 Pfam PF04542 Sigma-70 region 2 39 106 2.1E-19 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28120 104f6655893989db172328c7972d8cfd 196 SUPERFAMILY SSF88659 130 191 1.83E-10 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 Pfam PF01026 TatD related DNase 3 254 1.7E-77 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 SUPERFAMILY SSF51556 2 256 1.43E-85 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 PIRSF PIRSF005902 1 258 6.9E-76 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 Gene3D G3DSA:3.20.20.140 1 258 1.3E-81 T 29-03-2018 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 8.5E-84 T 29-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM474_RS03995 387a3edbef936f43063ae6253b4ada3d 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM474_RS25695 fd7f9e16cdcd73aac3e4027cf4575089 135 Pfam PF13474 SnoaL-like domain 14 113 9.2E-10 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS25695 fd7f9e16cdcd73aac3e4027cf4575089 135 SUPERFAMILY SSF54427 5 122 1.15E-27 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS25695 fd7f9e16cdcd73aac3e4027cf4575089 135 Gene3D G3DSA:3.10.450.50 2 135 4.6E-22 T 29-03-2018 AM474_RS25695 fd7f9e16cdcd73aac3e4027cf4575089 135 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 4 116 1.0E-9 T 29-03-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 SUPERFAMILY SSF52540 125 294 1.42E-11 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1175 0.0 T 29-03-2018 IPR017731 Type VI secretion system, IcmF AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 Pfam PF14331 ImcF-related N-terminal domain 195 452 1.6E-99 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 Gene3D G3DSA:3.40.50.300 72 338 1.3E-7 T 29-03-2018 AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 Pfam PF06744 Type VI secretion protein IcmF C-terminal 925 1125 2.9E-69 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AM474_RS14410 1d9f57178f07dffb3a1810b263f639bf 1177 Pfam PF06761 Intracellular multiplication and human macrophage-killing 504 797 3.6E-86 T 29-03-2018 IPR009612 ImcF-related AM474_RS23430 42304ebbfa1401c5118cd737ae420e37 238 Pfam PF11306 Protein of unknown function (DUF3108) 19 220 2.8E-19 T 29-03-2018 IPR021457 Protein of unknown function DUF3108 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 Gene3D G3DSA:3.40.190.10 92 179 9.9E-13 T 29-03-2018 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 Gene3D G3DSA:3.40.190.10 180 261 2.9E-12 T 29-03-2018 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 Gene3D G3DSA:1.10.10.10 6 91 8.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 SUPERFAMILY SSF53850 93 296 3.26E-29 T 29-03-2018 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 8.5E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 SUPERFAMILY SSF46785 2 86 1.61E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16345 6062a909297f3fc8e454efdd8f703f6f 305 Pfam PF03466 LysR substrate binding domain 92 293 1.3E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF52374 3 199 4.22E-132 T 29-03-2018 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF52374 401 652 4.22E-132 T 29-03-2018 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF50677 201 401 5.76E-54 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 847 1.1E-27 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.40.50.620 389 646 1.4E-68 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 3.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 3.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 3.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 3.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.1E-32 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 SUPERFAMILY SSF47323 658 934 2.43E-77 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 646 9.8E-197 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.40.50.620 44 120 3.7E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.30.2320.20 825 901 4.3E-22 T 29-03-2018 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:1.10.730.10 647 824 1.2E-40 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Gene3D G3DSA:3.90.740.10 197 388 7.4E-59 T 29-03-2018 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 849 1.6E-276 T 29-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.211 T 29-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AM474_RS20545 d63aad8cb8b2d53a5a7f1ca937940c07 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 1.8E-7 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM474_RS07700 526f1b9f5eb060e575df91b016ef7f44 140 SUPERFAMILY SSF82649 6 136 7.32E-43 T 29-03-2018 AM474_RS07700 526f1b9f5eb060e575df91b016ef7f44 140 Gene3D G3DSA:3.90.1010.10 2 138 5.4E-43 T 29-03-2018 AM474_RS07700 526f1b9f5eb060e575df91b016ef7f44 140 Pfam PF02657 Fe-S metabolism associated domain 15 133 1.6E-38 T 29-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 Pfam PF00005 ABC transporter 328 459 5.3E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 Pfam PF00005 ABC transporter 18 178 2.7E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 SUPERFAMILY SSF52540 298 518 1.08E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 Pfam PF12848 ABC transporter 217 295 9.5E-30 T 29-03-2018 IPR032781 ABC-transporter extension domain AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 SUPERFAMILY SSF52540 119 256 1.75E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 SUPERFAMILY SSF52540 2 92 1.75E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 Gene3D G3DSA:3.40.50.300 281 559 3.9E-47 T 29-03-2018 AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 Gene3D G3DSA:3.40.50.300 1 280 2.6E-50 T 29-03-2018 AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 SMART SM00382 26 223 1.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 SMART SM00382 337 504 2.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16565 aaba981630d58d710f8a0c14526e3fba 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 201 278 2.1E-30 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 429 493 1.7E-15 T 29-03-2018 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.844 T 29-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:2.40.50.140 131 200 1.8E-18 T 29-03-2018 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 202 280 1.63E-27 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:1.10.150.20 351 420 8.1E-14 T 29-03-2018 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 5.4E-123 T 29-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF69705 1 128 7.72E-39 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 9.9E-10 T 29-03-2018 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.4E-21 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 1.1E-21 T 29-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.1480.10 1 130 2.1E-45 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SMART SM00316 135 202 4.7E-12 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF00575 S1 RNA binding domain 135 197 7.6E-8 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF54814 281 344 1.5E-14 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF50249 134 201 3.82E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF13184 NusA-like KH domain 232 299 4.1E-26 T 29-03-2018 IPR025249 KH domain, NusA-like GO:0003723 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 357 418 2.2E-17 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 SUPERFAMILY SSF47794 432 492 1.38E-15 T 29-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Pfam PF08529 NusA N-terminal domain 4 125 5.0E-38 T 29-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM474_RS19520 c19e5ebd80129e19f231dbf7f075f7b0 493 Gene3D G3DSA:3.30.300.20 280 350 5.5E-13 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 Gene3D G3DSA:3.20.20.70 2 307 2.4E-113 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 301 1.1E-96 T 29-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 TIGRFAM TIGR00874 talAB: transaldolase 4 303 8.9E-134 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 SUPERFAMILY SSF51569 1 305 1.15E-109 T 29-03-2018 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 Hamap MF_00492 Transaldolase [tal]. 2 307 50.203 T 29-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM474_RS02595 13b24ca852c0702296e3baca83adc9cb 307 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 29-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 4.7E-36 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 Gene3D G3DSA:3.40.50.720 1 164 2.1E-34 T 29-03-2018 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 PIRSF PIRSF000103 1 291 3.0E-75 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 5.1E-50 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 SUPERFAMILY SSF48179 164 291 1.81E-37 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 291 6.7E-118 T 29-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 SUPERFAMILY SSF51735 2 162 1.53E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26620 f28da4e80800fae327783af5caf35ebe 296 Gene3D G3DSA:1.10.1040.10 165 294 9.8E-29 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 SMART SM00244 90 250 2.8E-33 T 29-03-2018 IPR001107 Band 7 domain AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 226 244 6.5E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 97 119 6.5E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 PRINTS PR00721 Stomatin signature 144 165 6.5E-7 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF01145 SPFH domain / Band 7 family 94 265 2.1E-29 T 29-03-2018 IPR001107 Band 7 domain AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 Pfam PF12221 Bacterial membrane protein N terminal 1 55 1.8E-15 T 29-03-2018 IPR020980 Menbrane protein HflK, N-terminal AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 SUPERFAMILY SSF117892 122 255 9.94E-24 T 29-03-2018 IPR001107 Band 7 domain AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 TIGRFAM TIGR01933 hflK: HflK protein 92 353 9.8E-113 T 29-03-2018 IPR010201 HflK GO:0016021 AM474_RS18470 a1a580d99c6ba17d4fe71aa1780294df 400 Gene3D G3DSA:1.20.5.620 259 305 2.9E-4 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM474_RS24900 46ed33193578c43e8b1a453cbae341de 197 Gene3D G3DSA:1.10.287.110 107 193 1.5E-9 T 29-03-2018 IPR001623 DnaJ domain AM474_RS24900 46ed33193578c43e8b1a453cbae341de 197 SMART SM00271 141 195 0.0048 T 29-03-2018 IPR001623 DnaJ domain AM474_RS24900 46ed33193578c43e8b1a453cbae341de 197 Pfam PF12339 DNA-J related protein 11 134 1.0E-42 T 29-03-2018 IPR021059 DnaJ-related protein, N-terminal AM474_RS24900 46ed33193578c43e8b1a453cbae341de 197 SUPERFAMILY SSF46565 137 192 1.44E-12 T 29-03-2018 IPR001623 DnaJ domain AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 473 43.403 T 29-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 Gene3D G3DSA:3.40.1190.20 2 309 4.1E-60 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 2.2E-16 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 SUPERFAMILY SSF53613 12 309 1.56E-58 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 SUPERFAMILY SSF52374 342 474 4.74E-25 T 29-03-2018 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 Pfam PF01467 Cytidylyltransferase-like 344 434 3.1E-16 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 Pfam PF00294 pfkB family carbohydrate kinase 13 304 1.0E-48 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 311 3.9E-126 T 29-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 Gene3D G3DSA:3.40.50.620 325 474 1.0E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18190 78a2e7f05c42702847849a65ec62df6c 474 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 472 1.3E-65 T 29-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.4E-66 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 668 40.332 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Gene3D G3DSA:3.40.50.300 1 142 8.0E-25 T 29-03-2018 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Gene3D G3DSA:3.40.50.300 143 275 3.5E-30 T 29-03-2018 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 668 0.0 T 29-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 3.6E-73 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Gene3D G3DSA:3.40.50.300 276 379 3.6E-25 T 29-03-2018 AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 SUPERFAMILY SSF52540 2 640 3.07E-165 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16330 6584216b45ae387a82e72254a3d54b1b 669 Gene3D G3DSA:3.40.50.300 387 620 5.3E-37 T 29-03-2018 AM474_RS24280 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF00460 Flagella basal body rod protein 5 35 5.1E-6 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM474_RS24280 5ab6de3b0b0977f1d6802cc232c1c012 249 SUPERFAMILY SSF117143 78 207 7.59E-16 T 29-03-2018 AM474_RS24280 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.9E-31 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM474_RS24280 5ab6de3b0b0977f1d6802cc232c1c012 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 226 2.5E-53 T 29-03-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 AM474_RS24280 5ab6de3b0b0977f1d6802cc232c1c012 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 239 4.3E-18 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 5.4E-38 T 29-03-2018 AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 Pfam PF00107 Zinc-binding dehydrogenase 159 292 1.1E-20 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 SUPERFAMILY SSF50129 5 144 4.71E-37 T 29-03-2018 IPR011032 GroES-like AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 Gene3D G3DSA:3.90.180.10 1 149 1.9E-35 T 29-03-2018 AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 SMART SM00829 20 332 2.5E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 Gene3D G3DSA:3.40.50.720 150 276 7.5E-28 T 29-03-2018 AM474_RS27425 3d04ee04008895751bb3cbc2a26e069a 334 SUPERFAMILY SSF51735 125 299 2.24E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS20820 b6f7ad09ee3d052dcc198aedd450ffda 299 Gene3D G3DSA:2.60.120.330 61 245 3.3E-43 T 29-03-2018 IPR027443 Isopenicillin N synthase-like AM474_RS20820 b6f7ad09ee3d052dcc198aedd450ffda 299 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 8.2E-48 T 29-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM474_RS20820 b6f7ad09ee3d052dcc198aedd450ffda 299 SUPERFAMILY SSF51197 99 239 4.12E-19 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:3.30.2090.10 157 270 4.1E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:3.30.70.1430 44 148 5.4E-31 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Pfam PF00873 AcrB/AcrD/AcrF family 8 1005 2.3E-157 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.6E-22 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82866 295 492 8.24E-32 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:1.20.1640.10 804 1009 5.8E-31 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82693 44 139 4.36E-19 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:3.30.70.1430 554 656 1.3E-13 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:3.30.2090.10 706 791 6.2E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82693 553 653 2.49E-8 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 Gene3D G3DSA:1.20.1640.10 285 506 3.6E-29 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82714 189 267 7.85E-10 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82693 141 186 1.39E-17 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82693 272 327 1.39E-17 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82866 789 1010 2.62E-44 T 29-03-2018 AM474_RS13980 dc54467034617ea2f05c27d317cb764b 1015 SUPERFAMILY SSF82714 707 790 5.23E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS26090 6d853cf99616d6c1cd093e7276d00f59 313 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.0E-168 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM474_RS26090 6d853cf99616d6c1cd093e7276d00f59 313 Gene3D G3DSA:3.40.50.150 90 284 3.4E-22 T 29-03-2018 AM474_RS26090 6d853cf99616d6c1cd093e7276d00f59 313 SUPERFAMILY SSF53335 4 287 1.03E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SUPERFAMILY SSF158472 177 229 4.05E-7 T 29-03-2018 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Pfam PF00672 HAMP domain 177 228 9.3E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 432 3.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23360 b6c385463baeef95b6a069df43576217 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.1E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.1E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.1E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 291 1.0E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SUPERFAMILY SSF55874 282 443 1.7E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Pfam PF16750 Sensor domain of 2-component histidine kinase 39 148 7.7E-35 T 29-03-2018 IPR031930 2-component histidine kinase, sensor domain AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SMART SM00388 233 292 4.5E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Gene3D G3DSA:1.10.287.130 223 287 3.0E-9 T 29-03-2018 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 Gene3D G3DSA:3.30.565.10 298 445 1.8E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SMART SM00304 177 232 1.7E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SUPERFAMILY SSF47384 217 291 1.96E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23360 b6c385463baeef95b6a069df43576217 445 SMART SM00387 337 445 2.5E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS08675 b06bd4fdd0f7cd188b2b9187a5f81780 316 Gene3D G3DSA:3.20.20.100 1 316 1.8E-86 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS08675 b06bd4fdd0f7cd188b2b9187a5f81780 316 SUPERFAMILY SSF51430 1 313 2.62E-95 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS08675 b06bd4fdd0f7cd188b2b9187a5f81780 316 Pfam PF00248 Aldo/keto reductase family 16 313 4.4E-69 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 Pfam PF03466 LysR substrate binding domain 89 267 2.6E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 Gene3D G3DSA:3.40.190.10 85 174 2.0E-15 T 29-03-2018 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 Gene3D G3DSA:1.10.10.10 1 84 5.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 SUPERFAMILY SSF53850 89 276 3.15E-33 T 29-03-2018 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 SUPERFAMILY SSF46785 2 105 1.67E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09610 4438e318f3bdccb1662039bbe8e2095c 289 Gene3D G3DSA:3.40.190.10 175 260 6.4E-23 T 29-03-2018 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 Gene3D G3DSA:3.40.190.10 113 211 1.0E-29 T 29-03-2018 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 Pfam PF13531 Bacterial extracellular solute-binding protein 27 250 3.3E-45 T 29-03-2018 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 SUPERFAMILY SSF53850 25 250 6.8E-64 T 29-03-2018 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 PIRSF PIRSF004846 1 251 4.7E-54 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 Gene3D G3DSA:3.40.190.10 20 112 6.3E-14 T 29-03-2018 AM474_RS28610 5705b54a07044ee8424f75c13d193358 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.1E-77 T 29-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 194 216 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 151 177 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 9.4E-33 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 Gene3D G3DSA:2.102.10.10 50 157 4.8E-26 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 394 1.4E-9 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 Gene3D G3DSA:3.90.380.10 158 463 1.6E-61 T 29-03-2018 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 TIGRFAM TIGR03228 anthran_1_2_A: anthranilate 1,2-dioxygenase, large subunit 15 452 9.6E-297 T 29-03-2018 IPR017638 Anthranilate 1,2-dioxygenase, large subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 SUPERFAMILY SSF50022 21 165 3.01E-47 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 1.4E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS32220 a79b9265198644e62306f44a04c3c1b9 464 SUPERFAMILY SSF55961 171 451 1.49E-56 T 29-03-2018 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SMART SM00387 352 463 1.8E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SUPERFAMILY SSF47384 226 307 1.51E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 457 8.7E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18770 1aa01afe10b3a463381173936c428217 463 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 460 1.5E-174 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SUPERFAMILY SSF158472 191 239 3.92E-5 T 29-03-2018 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SMART SM00304 189 242 7.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 Gene3D G3DSA:3.30.565.10 313 463 1.1E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18770 1aa01afe10b3a463381173936c428217 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 5.0E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 5.0E-5 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 Gene3D G3DSA:1.10.287.130 233 305 2.6E-12 T 29-03-2018 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SMART SM00388 243 309 6.2E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 Pfam PF00672 HAMP domain 189 238 5.3E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 307 2.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18770 1aa01afe10b3a463381173936c428217 463 SUPERFAMILY SSF55874 314 460 6.02E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26680 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS26680 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS26680 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.9E-58 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS26680 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS16485 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS16485 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS16485 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.9E-58 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS16485 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS27485 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS27485 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS27485 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.9E-58 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS27485 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS13450 d8f627373153637c15aee12d06a66f45 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.2E-73 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS13450 d8f627373153637c15aee12d06a66f45 172 SUPERFAMILY SSF141452 2 171 6.54E-47 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS13450 d8f627373153637c15aee12d06a66f45 172 Gene3D G3DSA:2.30.110.20 2 172 1.9E-58 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS13450 d8f627373153637c15aee12d06a66f45 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.9E-37 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF100934 504 615 2.75E-33 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:3.30.420.40 211 358 5.5E-36 T 29-03-2018 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.485 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF100920 384 535 2.75E-50 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.4E-56 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:2.60.34.10 387 528 5.0E-49 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF53067 19 197 8.74E-52 T 29-03-2018 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:3.30.420.40 20 210 6.4E-57 T 29-03-2018 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 1.4E-282 T 29-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 SUPERFAMILY SSF53067 200 376 1.57E-47 T 29-03-2018 AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Gene3D G3DSA:1.20.1270.10 529 616 2.7E-12 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM474_RS08750 ea38720499ce901a0c321f67eb04f44d 619 Pfam PF00012 Hsp70 protein 21 600 1.4E-182 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 183 229 5.5E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Pfam PF07721 Tetratricopeptide repeat 205 226 0.079 T 29-03-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 392 473 1.7E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 528 588 4.2E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Pfam PF14559 Tetratricopeptide repeat 248 305 4.7E-11 T 29-03-2018 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Pfam PF13432 Tetratricopeptide repeat 445 508 1.4E-5 T 29-03-2018 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Pfam PF13432 Tetratricopeptide repeat 326 362 0.017 T 29-03-2018 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Pfam PF13432 Tetratricopeptide repeat 516 574 1.9E-8 T 29-03-2018 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 48 182 0.0082 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SUPERFAMILY SSF48452 126 226 7.11E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 319 391 1.8E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 439 472 170.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 508 541 0.055 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 235 268 96.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 405 438 120.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 370 403 160.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 303 336 170.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SMART SM00028 473 507 97.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 230 318 6.0E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 Gene3D G3DSA:1.25.40.10 474 527 1.2E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19975 236479b458dbe7b683252957fb5e7ecf 590 SUPERFAMILY SSF48452 238 574 9.17E-29 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81271 375 447 1.72E-22 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Pfam PF13291 ACT domain 622 698 1.5E-15 T 29-03-2018 IPR002912 ACT domain AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SMART SM00954 235 345 1.2E-64 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.70.260 621 701 5.6E-10 T 29-03-2018 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.10.20.30 382 457 9.5E-24 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 3.1E-37 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Gene3D G3DSA:3.30.460.10 193 325 6.5E-41 T 29-03-2018 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF81301 181 392 1.36E-61 T 29-03-2018 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF109604 6 191 1.44E-70 T 29-03-2018 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 697 4.8E-245 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SUPERFAMILY SSF55021 624 699 1.93E-7 T 29-03-2018 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Pfam PF02824 TGS domain 388 447 3.8E-19 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 SMART SM00471 41 153 6.0E-8 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS16120 a5040bc72332d751d79564b8946a21be 701 Pfam PF13328 HD domain 26 175 1.1E-51 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS08560 a1c09857d508d244205c43d99133bff9 385 Pfam PF07690 Major Facilitator Superfamily 32 325 3.3E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS08560 a1c09857d508d244205c43d99133bff9 385 Gene3D G3DSA:1.20.1250.20 14 203 1.2E-13 T 29-03-2018 AM474_RS08560 a1c09857d508d244205c43d99133bff9 385 SUPERFAMILY SSF103473 18 385 1.15E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS08560 a1c09857d508d244205c43d99133bff9 385 Gene3D G3DSA:1.20.1250.20 204 385 8.2E-11 T 29-03-2018 AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.3E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 SUPERFAMILY SSF51735 4 245 8.63E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 9.8E-52 T 29-03-2018 AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 Gene3D G3DSA:3.40.50.720 43 245 3.7E-51 T 29-03-2018 AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 Gene3D G3DSA:3.40.50.720 1 42 3.0E-5 T 29-03-2018 AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17095 15dc52e09b588afee068ebbd8a1ac832 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 2.4E-10 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 2.4E-10 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 2.4E-10 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 2.4E-10 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 2.4E-10 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 554 1.0E-30 T 29-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 SUPERFAMILY SSF63737 4 199 2.22E-42 T 29-03-2018 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Gene3D G3DSA:2.60.40.1730 16 199 1.4E-27 T 29-03-2018 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 559 885 6.5E-123 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 884 0.0 T 29-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Pfam PF01433 Peptidase family M1 domain 214 445 1.2E-60 T 29-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 SUPERFAMILY SSF55486 209 457 2.01E-78 T 29-03-2018 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Gene3D G3DSA:1.10.390.10 286 449 1.1E-51 T 29-03-2018 AM474_RS04635 cf4be4c558da7e6bb815ab9605874e19 885 Gene3D G3DSA:1.25.50.10 556 884 4.6E-131 T 29-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AM474_RS01715 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS01715 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS23520 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS23520 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS23310 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS23310 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS24670 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS24670 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS19620 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS19620 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS01515 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS01515 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS20670 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS20670 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS31950 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS31950 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS24690 3dc710fc03255c42ad98d0df6160952a 415 ProSitePatterns PS01007 Transposases, Mutator family, signature. 243 267 - T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS24690 3dc710fc03255c42ad98d0df6160952a 415 Pfam PF00872 Transposase, Mutator family 27 389 2.2E-119 T 29-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 Pfam PF01687 Riboflavin kinase 184 305 4.2E-36 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 Pfam PF06574 FAD synthetase 15 167 2.1E-54 T 29-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 Gene3D G3DSA:2.40.30.30 180 310 8.2E-39 T 29-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 Gene3D G3DSA:3.40.50.620 1 179 6.9E-49 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 SMART SM00904 183 307 8.6E-60 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 PIRSF PIRSF004491 1 310 1.7E-103 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 SUPERFAMILY SSF52374 17 175 2.0E-31 T 29-03-2018 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 SUPERFAMILY SSF82114 174 306 1.46E-43 T 29-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM474_RS20540 5ebe43276891a00bd1bc59cb5f70b5a5 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 305 6.0E-97 T 29-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM474_RS27895 ae7e733a70583be5d24fb8082fa9ce14 273 SUPERFAMILY SSF46626 162 269 1.1E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27895 ae7e733a70583be5d24fb8082fa9ce14 273 Pfam PF00034 Cytochrome c 181 264 6.2E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27895 ae7e733a70583be5d24fb8082fa9ce14 273 Gene3D G3DSA:3.90.420.10 13 158 3.2E-4 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS27895 ae7e733a70583be5d24fb8082fa9ce14 273 Gene3D G3DSA:1.10.760.10 159 272 4.1E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS17390 15c7697eb846a349970e0a430704c0c1 322 Gene3D G3DSA:3.40.190.10 27 169 1.1E-15 T 29-03-2018 AM474_RS17390 15c7697eb846a349970e0a430704c0c1 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 301 4.0E-66 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS17390 15c7697eb846a349970e0a430704c0c1 322 SUPERFAMILY SSF53850 28 317 1.56E-74 T 29-03-2018 AM474_RS17390 15c7697eb846a349970e0a430704c0c1 322 Gene3D G3DSA:3.40.190.10 170 319 1.9E-27 T 29-03-2018 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 127 156 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 210 238 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 297 314 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 165 194 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 243 272 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 PRINTS PR00142 RecA protein signature 93 122 8.6E-85 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 7.5E-144 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.40.50.300 26 268 1.0E-46 T 29-03-2018 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF52540 5 267 5.88E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 ProSitePatterns PS00321 recA signature. 213 221 - T 29-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-169 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 Gene3D G3DSA:3.30.250.10 269 326 1.3E-23 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 SUPERFAMILY SSF54752 269 324 8.24E-20 T 29-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 SMART SM00382 57 228 9.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS07440 4a2e2c874a32e8d29b02bf6bcd78e201 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.98 T 29-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 Gene3D G3DSA:1.10.10.60 164 222 7.5E-11 T 29-03-2018 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 Pfam PF12833 Helix-turn-helix domain 188 264 1.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 SUPERFAMILY SSF51182 13 219 2.05E-24 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 SMART SM00342 182 264 5.1E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 Gene3D G3DSA:1.10.10.60 223 266 1.0E-8 T 29-03-2018 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 7.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 7.9E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 SUPERFAMILY SSF46689 218 263 1.39E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 Gene3D G3DSA:2.60.120.10 2 103 1.2E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS08855 f6c59e2b47a84774b16c2d57d9e3b68a 270 Pfam PF07883 Cupin domain 33 93 1.2E-6 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 218.942 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 Pfam PF00709 Adenylosuccinate synthetase 5 423 6.4E-179 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 SMART SM00788 4 424 5.3E-301 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.90.170.10 267 430 6.8E-67 T 29-03-2018 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 29-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 6.5E-185 T 29-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 SUPERFAMILY SSF52540 3 429 6.59E-177 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 29-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.40.440.10 154 266 7.9E-25 T 29-03-2018 AM474_RS18490 f5f59be034a97d07464a676700439a9b 430 Gene3D G3DSA:3.40.440.10 1 153 2.1E-55 T 29-03-2018 AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 SUPERFAMILY SSF56420 2 165 1.24E-64 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 PIRSF PIRSF004749 1 168 3.8E-60 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 Gene3D G3DSA:3.90.45.10 4 168 3.2E-66 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 Pfam PF01327 Polypeptide deformylase 4 153 3.0E-53 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 PRINTS PR01576 Peptide deformylase signature 90 101 4.7E-39 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 PRINTS PR01576 Peptide deformylase signature 102 120 4.7E-39 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 PRINTS PR01576 Peptide deformylase signature 121 150 4.7E-39 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.7E-39 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 1.7E-56 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS14765 f10352ea342881c0fba060384e8ba2b3 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 32.316 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 Pfam PF01230 HIT domain 11 106 8.6E-26 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 Gene3D G3DSA:3.30.428.10 1 109 3.7E-36 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 92 102 1.4E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 25 43 1.4E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 PRINTS PR00332 Histidine triad family signature 4 20 1.4E-19 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 29-03-2018 IPR019808 Histidine triad, conserved site AM474_RS11365 82798b4769b956f52734b08f00ad3638 112 SUPERFAMILY SSF54197 1 111 3.54E-40 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS27145 39351695d39c61148c6c807ea33a5a32 148 Pfam PF03061 Thioesterase superfamily 62 134 5.9E-13 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS27145 39351695d39c61148c6c807ea33a5a32 148 SUPERFAMILY SSF54637 12 145 3.46E-23 T 29-03-2018 IPR029069 HotDog domain AM474_RS27145 39351695d39c61148c6c807ea33a5a32 148 Gene3D G3DSA:3.10.129.10 22 148 1.4E-21 T 29-03-2018 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 125 140 2.8E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 42 58 2.8E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 70 85 2.8E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 PRINTS PR00773 GrpE protein signature 152 171 2.8E-25 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:3.90.20.20 13 116 6.8E-31 T 29-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 ProSitePatterns PS01071 grpE protein signature. 128 171 - T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 Hamap MF_01151 Protein GrpE [grpE]. 3 173 20.578 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 Pfam PF01025 GrpE 13 173 9.0E-52 T 29-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF51064 118 174 4.97E-19 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 SUPERFAMILY SSF58014 20 115 1.16E-26 T 29-03-2018 AM474_RS19425 2d844661287b9f98def46a9d20975916 186 Gene3D G3DSA:2.30.22.10 118 179 6.8E-22 T 29-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 Pfam PF00128 Alpha amylase, catalytic domain 38 396 3.1E-69 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF56112 852 994 5.92E-16 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF56112 1023 1047 5.92E-16 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF56112 722 811 5.92E-16 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:3.20.20.80 20 474 3.4E-121 T 29-03-2018 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:2.60.40.1180 475 570 1.1E-25 T 29-03-2018 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 Gene3D G3DSA:1.10.510.10 762 1041 5.7E-13 T 29-03-2018 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 14 559 2.1E-284 T 29-03-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SMART SM00642 23 427 7.6E-103 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF51011 477 558 2.72E-17 T 29-03-2018 AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 576 1090 2.5E-162 T 29-03-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 Pfam PF16657 Maltogenic Amylase, C-terminal domain 475 556 2.4E-27 T 29-03-2018 IPR032091 Maltogenic Amylase, C-terminal AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF51445 365 472 2.11E-129 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30095 8ae6f88b98195812c71a31672fa4e98a 1100 SUPERFAMILY SSF51445 12 338 2.11E-129 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS10085 4d8ccfaff917f0028da0b9b70fcc8e4e 295 SUPERFAMILY SSF48576 5 287 6.24E-87 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM474_RS10085 4d8ccfaff917f0028da0b9b70fcc8e4e 295 Pfam PF00348 Polyprenyl synthetase 29 259 2.3E-58 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM474_RS10085 4d8ccfaff917f0028da0b9b70fcc8e4e 295 Gene3D G3DSA:1.10.600.10 1 295 5.5E-88 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM474_RS10085 4d8ccfaff917f0028da0b9b70fcc8e4e 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM474_RS10085 4d8ccfaff917f0028da0b9b70fcc8e4e 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM474_RS28315 673766745906204531e41a331a0e5d19 536 SUPERFAMILY SSF52540 5 256 2.55E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28315 673766745906204531e41a331a0e5d19 536 SMART SM00382 310 501 2.9E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28315 673766745906204531e41a331a0e5d19 536 SMART SM00382 34 234 4.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28315 673766745906204531e41a331a0e5d19 536 Pfam PF00005 ABC transporter 26 184 2.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS28315 673766745906204531e41a331a0e5d19 536 Pfam PF00005 ABC transporter 302 452 2.3E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS28315 673766745906204531e41a331a0e5d19 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 503 528 3.6E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS28315 673766745906204531e41a331a0e5d19 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 3.9E-5 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS28315 673766745906204531e41a331a0e5d19 536 SUPERFAMILY SSF52540 275 523 1.78E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28315 673766745906204531e41a331a0e5d19 536 Gene3D G3DSA:3.40.50.300 271 534 4.1E-70 T 29-03-2018 AM474_RS28315 673766745906204531e41a331a0e5d19 536 Gene3D G3DSA:3.40.50.300 2 270 4.8E-74 T 29-03-2018 AM474_RS28315 673766745906204531e41a331a0e5d19 536 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS28315 673766745906204531e41a331a0e5d19 536 ProSitePatterns PS00211 ABC transporters family signature. 424 438 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS26605 fdf7e79219eee56a4b7de7fdcff88e84 304 PIRSF PIRSF016502 3 303 4.0E-70 T 29-03-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 AM474_RS26605 fdf7e79219eee56a4b7de7fdcff88e84 304 Pfam PF03253 Urea transporter 11 282 5.7E-50 T 29-03-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 AM474_RS26605 fdf7e79219eee56a4b7de7fdcff88e84 304 Gene3D G3DSA:1.10.3430.10 1 295 9.8E-64 T 29-03-2018 AM474_RS04500 6182f213bb99b2cd8e6ec683d7d9fe0f 158 Gene3D G3DSA:1.10.260.40 6 129 9.7E-6 T 29-03-2018 AM474_RS04500 6182f213bb99b2cd8e6ec683d7d9fe0f 158 SUPERFAMILY SSF47413 12 64 4.07E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 Pfam PF01252 Signal peptidase (SPase) II 15 153 7.7E-35 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 TIGRFAM TIGR00077 lspA: signal peptidase II 11 157 3.9E-37 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 2.4E-15 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 134 150 2.4E-15 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 2.4E-15 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 ProSitePatterns PS00855 Signal peptidases II signature. 101 113 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS02840 414c8b0e2aee1afde8362aff5e4ae6cc 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 159 15.284 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 PIRSF PIRSF000370 52 264 5.5E-67 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 Pfam PF04055 Radical SAM superfamily 77 197 8.7E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 54 261 35.844 T 29-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 Gene3D G3DSA:3.20.20.70 73 251 5.9E-16 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 54 264 5.1E-111 T 29-03-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 SUPERFAMILY SSF102114 76 154 2.09E-14 T 29-03-2018 AM474_RS23610 7856d30d530bd7b92628cd4da278577a 264 Pfam PF13394 4Fe-4S single cluster domain 75 156 1.3E-10 T 29-03-2018 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF82697 1 150 1.99E-47 T 29-03-2018 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SMART SM01211 1042 1297 5.9E-155 T 29-03-2018 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.30.1330.10 217 423 6.1E-48 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.30.1330.10 613 811 9.9E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.30.1330.10 181 216 0.0012 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF109736 153 218 1.96E-21 T 29-03-2018 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF56042 430 612 8.67E-54 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 2.3E-15 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 586 6.0E-31 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF55326 622 814 1.49E-67 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF52317 1039 1297 3.96E-96 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.40.50.880 1041 1296 2.0E-29 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF56042 823 1036 5.08E-56 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1297 4.4E-106 T 29-03-2018 AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 SUPERFAMILY SSF55326 219 426 2.23E-63 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.90.650.10 820 997 1.3E-35 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Gene3D G3DSA:3.90.650.10 424 612 4.7E-32 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS08190 cf98b600f485bf7e2a0149c8a9e11449 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1298 21.375 T 29-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS26715 dac168a9e2ac461bf88502a99edcfadf 449 PIRSF PIRSF005353 14 449 1.7E-173 T 29-03-2018 IPR026033 Purine permease PbuG-like AM474_RS26715 dac168a9e2ac461bf88502a99edcfadf 449 Pfam PF00860 Permease family 38 411 2.4E-50 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS22560 ab5e6d0f9613296876dfde5fa4f9f25b 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 7.3E-228 T 29-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AM474_RS22560 ab5e6d0f9613296876dfde5fa4f9f25b 506 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS22560 ab5e6d0f9613296876dfde5fa4f9f25b 506 Pfam PF00474 Sodium:solute symporter family 35 437 1.0E-138 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS22560 ab5e6d0f9613296876dfde5fa4f9f25b 506 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS22560 ab5e6d0f9613296876dfde5fa4f9f25b 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 7.1E-124 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 Pfam PF16864 Dimerisation domain 12 86 1.1E-6 T 29-03-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 SUPERFAMILY SSF46785 10 89 5.99E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 Pfam PF00891 O-methyltransferase 100 316 4.2E-31 T 29-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 Gene3D G3DSA:1.10.10.10 1 88 2.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 SUPERFAMILY SSF53335 95 330 5.25E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 Gene3D G3DSA:3.40.50.150 89 334 1.7E-39 T 29-03-2018 AM474_RS10895 af90995e3def1523d20cf692096be1e7 334 PIRSF PIRSF005739 1 332 7.0E-38 T 29-03-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 2.7E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 424 2.7E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.7E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 2.7E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 SMART SM01049 45 136 1.5E-25 T 29-03-2018 IPR033480 Single Cache domain 2 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 SMART SM00304 230 284 6.5E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Pfam PF00672 HAMP domain 231 280 6.1E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 526 4.5E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 SMART SM00283 299 560 5.9E-79 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Gene3D G3DSA:1.10.287.950 343 561 3.6E-52 T 29-03-2018 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Gene3D G3DSA:1.10.287.950 197 342 4.2E-10 T 29-03-2018 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Pfam PF17200 Single Cache domain 2 51 196 7.5E-25 T 29-03-2018 IPR033480 Single Cache domain 2 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 SUPERFAMILY SSF58104 252 561 1.44E-79 T 29-03-2018 AM474_RS01105 e21ce8d08a93f6375891eb24c3ccfc01 561 Gene3D G3DSA:3.30.450.20 30 196 8.5E-38 T 29-03-2018 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 PIRSF PIRSF002134 1 118 3.7E-44 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 SUPERFAMILY SSF46946 2 114 3.01E-48 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 29-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:1.10.8.50 1 66 2.7E-25 T 29-03-2018 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.697 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:4.10.910.10 67 84 4.4E-18 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 Gene3D G3DSA:4.10.910.10 85 118 1.8E-26 T 29-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.1E-33 T 29-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11060 cd04fee333f03d42c7419d33aa6a7bd3 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.5E-55 T 29-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 5.3E-96 T 29-03-2018 IPR000523 Magnesium chelatase ChlI domain AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 SMART SM00382 210 391 9.7E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.4E-43 T 29-03-2018 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 6.7E-189 T 29-03-2018 IPR004482 Mg chelatase-related protein AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 Gene3D G3DSA:3.30.230.10 2 180 5.5E-45 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 8.3E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 8.3E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 8.3E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 8.3E-7 T 29-03-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 492 1.0E-25 T 29-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 SUPERFAMILY SSF54211 8 169 6.07E-35 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 SUPERFAMILY SSF52540 187 492 1.25E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16360 40051b31ab521e1ee137b437f349b8c4 497 Gene3D G3DSA:3.40.50.300 191 418 1.8E-21 T 29-03-2018 AM474_RS03100 ad573eb230dc2ec6b1f0e0793b98bdde 148 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 35 143 1.2E-42 T 29-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM474_RS03100 ad573eb230dc2ec6b1f0e0793b98bdde 148 Pfam PF07511 Protein of unknown function (DUF1525) 35 143 4.2E-42 T 29-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM474_RS03100 ad573eb230dc2ec6b1f0e0793b98bdde 148 Gene3D G3DSA:3.40.30.10 11 148 6.4E-4 T 29-03-2018 AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 Pfam PF07690 Major Facilitator Superfamily 28 337 5.9E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 Gene3D G3DSA:1.20.1250.20 239 429 7.6E-21 T 29-03-2018 AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 SUPERFAMILY SSF103473 9 421 2.75E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS18700 8622c52ab70094dda10f41ac82e2f41a 440 Gene3D G3DSA:1.20.1250.20 7 212 3.4E-34 T 29-03-2018 AM474_RS02055 ca472bc9048c1abe0bff9b6cd9aaee04 299 Pfam PF04261 Dyp-type peroxidase family 41 287 3.7E-35 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM474_RS02055 ca472bc9048c1abe0bff9b6cd9aaee04 299 SUPERFAMILY SSF54909 7 290 1.14E-74 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS02055 ca472bc9048c1abe0bff9b6cd9aaee04 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 11 288 1.1E-71 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM474_RS10170 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 SUPERFAMILY SSF53335 18 173 1.63E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10170 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 Gene3D G3DSA:3.40.50.150 33 217 1.1E-30 T 29-03-2018 AM474_RS10170 5b004f674ff0d5f5d3c4be7c1ae48fe3 220 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 81 153 8.5E-16 T 29-03-2018 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF54211 236 491 2.12E-98 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 29-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 3.2E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 Gene3D G3DSA:3.30.565.10 1 229 4.4E-53 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.88 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 SMART SM00387 30 187 1.8E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF55874 8 216 1.44E-65 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 SUPERFAMILY SSF110942 518 630 4.05E-35 T 29-03-2018 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 Pfam PF00183 Hsp90 protein 227 629 3.1E-132 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PIRSF PIRSF002583 1 634 3.9E-218 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS27155 779af721d76805f4f2e37c253abbbfbf 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 3.2E-61 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF47446 329 433 8.99E-35 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00962 100 296 2.1E-115 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.10.260.30 328 435 3.4E-36 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:3.40.50.300 96 210 8.8E-11 T 29-03-2018 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00382 99 247 3.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02978 Signal peptide binding domain 329 430 1.4E-32 T 29-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-21 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.20.120.140 211 310 9.3E-33 T 29-03-2018 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 432 8.4E-177 T 29-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.471 T 29-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 SMART SM00963 1 86 2.1E-35 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Gene3D G3DSA:1.20.120.140 1 91 1.3E-29 T 29-03-2018 AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 SUPERFAMILY SSF52540 42 354 5.75E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08095 1c23eb3808670651d8b3d1f08ba9f529 457 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 3.4E-74 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 640 2.6E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.30.565.10 474 641 3.2E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF55874 468 640 8.51E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF07696 7TMR-DISM extracellular 2 49 170 2.4E-21 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF47384 409 480 1.18E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:1.10.287.130 395 473 6.8E-17 T 29-03-2018 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 5.7E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 5.7E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 5.7E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00387 526 641 2.3E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF52172 656 782 4.27E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00388 414 479 1.9E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 479 1.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SUPERFAMILY SSF52172 807 929 2.85E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00448 658 777 6.2E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 SMART SM00448 808 924 9.9E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF07695 7TM diverse intracellular signalling 189 388 1.4E-22 T 29-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.40.50.2300 799 940 1.3E-37 T 29-03-2018 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00072 Response regulator receiver domain 661 776 6.2E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Pfam PF00072 Response regulator receiver domain 810 924 4.1E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18930 db2fa9b15a4edec1d256a9b87fb8db37 942 Gene3D G3DSA:3.40.50.2300 652 798 3.1E-26 T 29-03-2018 AM474_RS24550 59732d81eddb7004764a85e7f176a1b7 250 Gene3D G3DSA:3.40.50.1220 1 52 5.7E-7 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS24550 59732d81eddb7004764a85e7f176a1b7 250 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 12 246 56.31 T 29-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AM474_RS24550 59732d81eddb7004764a85e7f176a1b7 250 SUPERFAMILY SSF52467 3 247 6.55E-83 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS24550 59732d81eddb7004764a85e7f176a1b7 250 Pfam PF02146 Sir2 family 19 199 2.7E-50 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 AM474_RS24550 59732d81eddb7004764a85e7f176a1b7 250 Gene3D G3DSA:3.40.50.1220 53 247 4.1E-58 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 SMART SM00382 28 227 4.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 SMART SM00382 342 512 7.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF12848 ABC transporter 221 299 4.1E-10 T 29-03-2018 IPR032781 ABC-transporter extension domain AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF00005 ABC transporter 19 182 2.6E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF00005 ABC transporter 334 467 8.4E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Gene3D G3DSA:3.90.20.10 547 640 1.1E-4 T 29-03-2018 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Pfam PF16326 ABC transporter C-terminal domain 571 639 8.4E-19 T 29-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Gene3D G3DSA:3.40.50.300 277 546 1.2E-58 T 29-03-2018 AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 306 528 1.49E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 3 94 2.88E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 SUPERFAMILY SSF52540 123 233 2.88E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04310 9ca151844b6181f6e055aafdc7937be5 640 Gene3D G3DSA:3.40.50.300 1 276 2.4E-50 T 29-03-2018 AM474_RS28355 1565da6395c7de07811b9434f3648f95 148 Hamap MF_00042 Ribonuclease H [rnhA]. 4 148 33.806 T 29-03-2018 IPR022892 Ribonuclease HI GO:0004523 AM474_RS28355 1565da6395c7de07811b9434f3648f95 148 Pfam PF00075 RNase H 5 143 5.7E-52 T 29-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM474_RS28355 1565da6395c7de07811b9434f3648f95 148 Gene3D G3DSA:3.30.420.10 1 147 3.7E-54 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS28355 1565da6395c7de07811b9434f3648f95 148 SUPERFAMILY SSF53098 5 143 3.16E-58 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS10295 1f90a60036617acf8e6db170d85aff8e 844 SUPERFAMILY SSF141729 17 145 1.57E-23 T 29-03-2018 AM474_RS10295 1f90a60036617acf8e6db170d85aff8e 844 Pfam PF13954 PapC N-terminal domain 19 172 4.5E-36 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM474_RS10295 1f90a60036617acf8e6db170d85aff8e 844 Pfam PF13953 PapC C-terminal domain 754 818 1.0E-18 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM474_RS10295 1f90a60036617acf8e6db170d85aff8e 844 Pfam PF00577 Outer membrane usher protein 187 743 1.3E-155 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM474_RS15245 3a65a7d41efec3c07f35217234d4d174 269 SMART SM00382 30 199 2.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15245 3a65a7d41efec3c07f35217234d4d174 269 Pfam PF00005 ABC transporter 21 149 1.1E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS15245 3a65a7d41efec3c07f35217234d4d174 269 Gene3D G3DSA:3.40.50.300 1 235 4.1E-52 T 29-03-2018 AM474_RS15245 3a65a7d41efec3c07f35217234d4d174 269 SUPERFAMILY SSF52540 4 214 2.5E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15245 3a65a7d41efec3c07f35217234d4d174 269 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Gene3D G3DSA:3.30.1490.70 345 389 4.6E-10 T 29-03-2018 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 219 521 6.1E-111 T 29-03-2018 IPR014146 DNA ligase D, ligase domain AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Pfam PF01068 ATP dependent DNA ligase domain 224 399 1.7E-22 T 29-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Gene3D G3DSA:3.30.470.30 165 344 7.4E-33 T 29-03-2018 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 549 793 8.0E-89 T 29-03-2018 IPR014145 DNA ligase D, polymerase domain AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 228 823 1.2E-229 T 29-03-2018 IPR014143 DNA ligase D AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 7 162 5.5E-71 T 29-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Pfam PF04679 ATP dependent DNA ligase C terminal region 418 515 1.1E-23 T 29-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Pfam PF13298 DNA polymerase Ligase (LigD) 40 144 4.9E-39 T 29-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 Gene3D G3DSA:2.40.50.140 390 517 5.2E-31 T 29-03-2018 AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 SUPERFAMILY SSF50249 403 523 3.98E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS30015 ab89d17be05daeb1cb27637a520ab0af 840 SUPERFAMILY SSF56091 216 399 2.35E-45 T 29-03-2018 AM474_RS22865 c2964a62b80594b6f07ae635302a478d 370 SUPERFAMILY SSF51395 3 357 2.39E-99 T 29-03-2018 AM474_RS22865 c2964a62b80594b6f07ae635302a478d 370 Gene3D G3DSA:3.20.20.70 1 368 1.1E-105 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS22865 c2964a62b80594b6f07ae635302a478d 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 354 2.5E-70 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 SUPERFAMILY SSF158544 104 218 2.46E-7 T 29-03-2018 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 Pfam PF03934 Type II secretion system (T2SS), protein K 31 313 1.4E-66 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 Gene3D G3DSA:3.30.1300.30 27 147 2.2E-24 T 29-03-2018 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 SUPERFAMILY SSF47781 218 272 3.78E-6 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 SUPERFAMILY SSF54523 281 320 4.08E-9 T 29-03-2018 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 SUPERFAMILY SSF54523 43 103 4.08E-9 T 29-03-2018 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 PIRSF PIRSF002786 1 321 2.1E-91 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM474_RS22105 24b8d2cd516c245453c7fe718aa2f338 321 Gene3D G3DSA:1.10.40.60 221 279 3.2E-6 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 Gene3D G3DSA:3.30.870.10 532 929 8.7E-40 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SUPERFAMILY SSF56024 462 495 1.86E-27 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SUPERFAMILY SSF56024 46 193 1.86E-27 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 Pfam PF00614 Phospholipase D Active site motif 164 189 1.5E-7 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 Pfam PF00614 Phospholipase D Active site motif 851 877 3.2E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SUPERFAMILY SSF56024 606 715 8.37E-18 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SUPERFAMILY SSF56024 844 925 8.37E-18 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 Gene3D G3DSA:3.30.870.10 41 506 4.3E-30 T 29-03-2018 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SMART SM00155 162 189 0.0016 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS06850 ecdb0dfbf912dd97979e25902ebd0938 1099 SMART SM00155 850 877 3.7E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 141 437 5.0E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 126 3.2E-33 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 SUPERFAMILY SSF51971 139 381 5.89E-51 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 372 388 2.7E-19 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 294 2.7E-19 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 2.7E-19 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 423 2.7E-19 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 296 1.2E-9 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 164 1.2E-9 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 411 429 1.2E-9 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Gene3D G3DSA:3.50.50.60 380 455 2.1E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Gene3D G3DSA:1.10.1060.10 9 140 2.4E-31 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Gene3D G3DSA:3.40.50.720 141 238 9.4E-17 T 29-03-2018 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 SUPERFAMILY SSF46548 15 151 1.52E-27 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Gene3D G3DSA:3.50.50.60 239 301 6.0E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12495 ff22788680f8c1da2131e971409025d5 455 Gene3D G3DSA:3.50.50.60 302 379 4.1E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30515 6a22c7cf2040d8c0d04fee2e50c8b56d 295 Gene3D G3DSA:2.60.120.620 4 238 6.5E-35 T 29-03-2018 AM474_RS30515 6a22c7cf2040d8c0d04fee2e50c8b56d 295 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 23 221 3.0E-40 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AM474_RS30515 6a22c7cf2040d8c0d04fee2e50c8b56d 295 SUPERFAMILY SSF51197 17 262 8.88E-46 T 29-03-2018 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 2.7E-106 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 386 483 7.1E-36 T 29-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF52821 397 482 5.63E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF52402 181 374 2.14E-38 T 29-03-2018 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 SUPERFAMILY SSF143437 1 175 3.84E-48 T 29-03-2018 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.30.2300.10 87 165 1.4E-18 T 29-03-2018 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 178 370 1.8E-64 T 29-03-2018 IPR020536 Thil, AANH domain GO:0004810 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.40.250.10 407 483 2.8E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Pfam PF02926 THUMP domain 29 166 1.6E-21 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 SMART SM00981 77 167 5.1E-24 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.30.70.1510 2 84 3.5E-21 T 29-03-2018 AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Gene3D G3DSA:3.40.50.620 177 406 1.6E-23 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS17280 cedf7a59f054c94731e0f52886c92b46 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 206.371 T 29-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 AM474_RS01870 386f6d04d89d0bae62b1829995de6d14 393 PIRSF PIRSF037118 1 393 1.6E-161 T 29-03-2018 IPR017115 Tellurite resistance, TerA AM474_RS01870 386f6d04d89d0bae62b1829995de6d14 393 Gene3D G3DSA:2.60.60.30 213 378 1.0E-26 T 29-03-2018 AM474_RS01870 386f6d04d89d0bae62b1829995de6d14 393 Gene3D G3DSA:2.60.60.30 13 161 3.0E-30 T 29-03-2018 AM474_RS01870 386f6d04d89d0bae62b1829995de6d14 393 Pfam PF02342 TerD domain 19 162 2.4E-26 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS05445 8df085f494a88354174be49b363b485f 599 Pfam PF00571 CBS domain 222 263 0.0022 T 29-03-2018 IPR000644 CBS domain AM474_RS05445 8df085f494a88354174be49b363b485f 599 Pfam PF00571 CBS domain 156 199 0.0072 T 29-03-2018 IPR000644 CBS domain AM474_RS05445 8df085f494a88354174be49b363b485f 599 SUPERFAMILY SSF51206 9 135 1.96E-19 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS05445 8df085f494a88354174be49b363b485f 599 Pfam PF03445 Putative nucleotidyltransferase DUF294 290 420 7.1E-42 T 29-03-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AM474_RS05445 8df085f494a88354174be49b363b485f 599 Gene3D G3DSA:3.10.580.10 130 272 5.4E-13 T 29-03-2018 AM474_RS05445 8df085f494a88354174be49b363b485f 599 Gene3D G3DSA:2.60.120.10 3 129 1.9E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS05445 8df085f494a88354174be49b363b485f 599 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 4.6E-9 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS05445 8df085f494a88354174be49b363b485f 599 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 458 594 7.9E-39 T 29-03-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AM474_RS05445 8df085f494a88354174be49b363b485f 599 SMART SM00100 11 127 1.2E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS05445 8df085f494a88354174be49b363b485f 599 SUPERFAMILY SSF54631 153 264 1.09E-14 T 29-03-2018 AM474_RS00665 56c944c1c9c506f85ee126642f6bb1ae 301 SUPERFAMILY SSF51569 3 295 3.85E-75 T 29-03-2018 AM474_RS00665 56c944c1c9c506f85ee126642f6bb1ae 301 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 29-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 AM474_RS00665 56c944c1c9c506f85ee126642f6bb1ae 301 Gene3D G3DSA:3.20.20.70 2 299 1.1E-112 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS00665 56c944c1c9c506f85ee126642f6bb1ae 301 Pfam PF00682 HMGL-like 7 278 7.8E-55 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:3.10.290.10 102 144 4.2E-18 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:1.10.1050.10 1 101 9.2E-43 T 29-03-2018 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 SUPERFAMILY SSF55174 3 206 4.97E-72 T 29-03-2018 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 SMART SM00363 96 160 1.7E-19 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 1.1E-80 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 SMART SM01390 3 95 3.3E-52 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF01479 S4 domain 97 143 1.2E-20 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 29-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Gene3D G3DSA:1.10.1050.10 145 206 2.3E-13 T 29-03-2018 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 7.5E-34 T 29-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM474_RS11050 71795eb63bdb23b8ba831912c0915bac 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.582 T 29-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM474_RS10105 5266d8f37a7825bae3d3a41c4ca429fc 205 SUPERFAMILY SSF142695 3 172 1.15E-65 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS10105 5266d8f37a7825bae3d3a41c4ca429fc 205 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 45.123 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS10105 5266d8f37a7825bae3d3a41c4ca429fc 205 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 8.3E-81 T 29-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS10105 5266d8f37a7825bae3d3a41c4ca429fc 205 Pfam PF00925 GTP cyclohydrolase II 8 170 1.1E-67 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 Gene3D G3DSA:3.40.50.300 4 194 1.6E-60 T 29-03-2018 AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 Pfam PF01715 IPP transferase 41 297 1.1E-86 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 SUPERFAMILY SSF52540 8 152 4.88E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 303 1.2E-101 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 314 29.902 T 29-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM474_RS18455 e0d2b95f90060f0328dcdd3de4d49d72 323 Gene3D G3DSA:1.10.287.890 213 295 2.0E-26 T 29-03-2018 AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 7.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 Pfam PF00106 short chain dehydrogenase 5 188 3.7E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 Gene3D G3DSA:3.40.50.720 4 277 2.8E-66 T 29-03-2018 AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 SUPERFAMILY SSF51735 5 245 6.59E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26015 d606e0414f42ccbf2cfa029353eb62af 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 SUPERFAMILY SSF52540 247 449 6.76E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 423 436 - T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 Gene3D G3DSA:3.40.50.300 246 451 9.6E-40 T 29-03-2018 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 177 450 62.412 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 Pfam PF00448 SRP54-type protein, GTPase domain 250 449 3.5E-77 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 SMART SM00962 249 450 6.2E-122 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 SUPERFAMILY SSF47364 148 228 1.05E-20 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 178 449 1.1E-109 T 29-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 SMART SM00963 153 234 2.5E-24 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 SMART SM00382 248 395 2.0E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 Pfam PF02881 SRP54-type protein, helical bundle domain 165 230 4.3E-13 T 29-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS12845 51bbed059f740ef337759d5d30fc6340 455 Gene3D G3DSA:1.20.120.140 148 245 2.1E-23 T 29-03-2018 AM474_RS26840 40c12cd486a15ac1a64961910edc90a4 278 Gene3D G3DSA:1.20.1260.10 124 192 0.005 T 29-03-2018 IPR012347 Ferritin-related AM474_RS26840 40c12cd486a15ac1a64961910edc90a4 278 PIRSF PIRSF007580 1 278 7.0E-103 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS26840 40c12cd486a15ac1a64961910edc90a4 278 Pfam PF10118 Predicted metal-dependent hydrolase 16 262 3.0E-91 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS11510 a5031c64a439e5dd2fcc17c1023505a4 167 Pfam PF04985 Phage tail tube protein FII 3 166 6.1E-59 T 29-03-2018 IPR006498 Tail tube protein AM474_RS11510 a5031c64a439e5dd2fcc17c1023505a4 167 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 167 1.4E-78 T 29-03-2018 IPR006498 Tail tube protein AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03471 Transporter associated domain 439 514 2.3E-18 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF54631 291 426 3.77E-21 T 29-03-2018 AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF03741 Integral membrane protein TerC family 15 203 5.9E-47 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 SUPERFAMILY SSF56176 438 514 3.0E-18 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 SMART SM01091 437 515 4.7E-22 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.30.465.10 432 515 3.6E-20 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 Gene3D G3DSA:3.10.580.10 284 431 2.3E-25 T 29-03-2018 AM474_RS25725 db4ee5ecd03d67e62aa5ed0471330c59 515 Pfam PF00571 CBS domain 374 423 1.1E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00487 598 788 3.1E-35 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1105 28.986 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 522 781 1.36E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF141259 469 546 5.36E-23 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF00270 DEAD/DEAH box helicase 603 763 9.6E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM01058 477 574 1.2E-48 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF03461 TRCF domain 1007 1098 6.3E-27 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00982 1006 1106 2.3E-50 T 29-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.300 450 786 3.1E-39 T 29-03-2018 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF02559 CarD-like/TRCF domain 478 573 2.6E-24 T 29-03-2018 IPR003711 CarD-like/TRCF domain AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 351 464 3.56E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Pfam PF00271 Helicase conserved C-terminal domain 804 907 5.2E-16 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1079 0.0 T 29-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF143517 992 1144 1.01E-43 T 29-03-2018 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 Gene3D G3DSA:3.40.50.300 787 954 5.2E-24 T 29-03-2018 AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SMART SM00490 824 908 1.2E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 780 988 7.92E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04220 5d2f8efc500453456aedf2f6e5d679d9 1148 SUPERFAMILY SSF52540 10 340 1.33E-107 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 146 5.0E-67 T 29-03-2018 AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 29-03-2018 IPR028871 Blue (type 1) copper protein, binding site AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 SUPERFAMILY SSF49503 21 147 1.81E-48 T 29-03-2018 IPR008972 Cupredoxin AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 Gene3D G3DSA:2.60.40.420 21 148 2.8E-12 T 29-03-2018 IPR008972 Cupredoxin AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 TIGRFAM TIGR02695 azurin: azurin 23 147 1.5E-62 T 29-03-2018 IPR014068 Azurin AM474_RS18590 fa752ba998c90bd70d52744650d0cdd2 148 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 148 2.6E-32 T 29-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 SMART SM01091 340 418 4.0E-19 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Gene3D G3DSA:3.10.580.10 186 333 1.2E-28 T 29-03-2018 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Pfam PF01595 Domain of unknown function DUF21 12 165 3.5E-37 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Pfam PF00571 CBS domain 216 261 3.7E-4 T 29-03-2018 IPR000644 CBS domain AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Pfam PF00571 CBS domain 277 325 2.1E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 SUPERFAMILY SSF56176 337 418 2.34E-18 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 SMART SM00116 277 325 1.2 T 29-03-2018 IPR000644 CBS domain AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 SMART SM00116 213 262 7.2 T 29-03-2018 IPR000644 CBS domain AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Gene3D G3DSA:3.30.465.10 334 416 2.9E-14 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 SUPERFAMILY SSF54631 192 328 1.17E-28 T 29-03-2018 AM474_RS08105 44e50c970cd277457dda16cd4d531cb0 430 Pfam PF03471 Transporter associated domain 341 414 5.3E-15 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 190 1.1E-7 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 Gene3D G3DSA:1.20.1050.10 92 195 5.2E-20 T 29-03-2018 AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 Pfam PF02798 Glutathione S-transferase, N-terminal domain 8 74 6.3E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 SUPERFAMILY SSF47616 71 194 1.64E-21 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 SUPERFAMILY SSF52833 1 83 7.63E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS04395 30227dbeb8149616708dcfad53fc4ed7 198 Gene3D G3DSA:3.40.30.10 1 91 4.2E-26 T 29-03-2018 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 Gene3D G3DSA:1.10.530.10 471 638 1.7E-37 T 29-03-2018 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 Gene3D G3DSA:1.10.1240.20 402 470 2.5E-17 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 Gene3D G3DSA:1.25.20.10 25 385 2.8E-46 T 29-03-2018 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 Pfam PF01464 Transglycosylase SLT domain 485 596 9.3E-28 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 470 6.1E-17 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 SUPERFAMILY SSF48435 26 475 5.36E-129 T 29-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 AM474_RS04315 dd7742f873445468e47e6e564650b531 642 SUPERFAMILY SSF53955 478 636 2.97E-45 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS20825 0e633d7a09a4ce87aed6eaa3feb9ecca 251 Gene3D G3DSA:3.20.20.370 7 251 4.7E-96 T 29-03-2018 AM474_RS20825 0e633d7a09a4ce87aed6eaa3feb9ecca 251 Pfam PF03746 LamB/YcsF family 8 249 3.8E-93 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS20825 0e633d7a09a4ce87aed6eaa3feb9ecca 251 SUPERFAMILY SSF88713 7 249 6.82E-90 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS20825 0e633d7a09a4ce87aed6eaa3feb9ecca 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 42.626 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 SUPERFAMILY SSF53686 5 294 1.83E-90 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 Gene3D G3DSA:3.40.50.1100 134 299 7.4E-45 T 29-03-2018 AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 2.3E-170 T 29-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 1.5E-124 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 Gene3D G3DSA:3.40.50.1100 25 133 1.9E-32 T 29-03-2018 AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 2.2E-68 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS23370 24a73a756e5368bd4000340aff301f64 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM474_RS10480 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Gene3D G3DSA:2.30.30.370 1 39 2.4E-19 T 29-03-2018 AM474_RS10480 d67ccbbb5ac3ad0bba25958fe54f1b20 259 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 246 4.1E-121 T 29-03-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 AM474_RS10480 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 244 3.4E-57 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10480 d67ccbbb5ac3ad0bba25958fe54f1b20 259 SUPERFAMILY SSF56529 39 249 7.85E-71 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10480 d67ccbbb5ac3ad0bba25958fe54f1b20 259 Gene3D G3DSA:3.90.850.10 40 258 6.2E-69 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 45.218 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:1.20.1180.10 205 258 1.7E-23 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 1.9E-95 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 32 65 6.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 1.5E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 PIRSF PIRSF000456 1 258 1.2E-99 T 29-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:2.160.10.10 90 204 4.8E-25 T 29-03-2018 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 SUPERFAMILY SSF51161 3 258 3.83E-77 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 4.2E-27 T 29-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 Gene3D G3DSA:2.160.10.10 2 89 3.8E-20 T 29-03-2018 AM474_RS07580 2fb60058c7ebe8acf0b077ae3a64e0a1 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 4 32 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PIRSF PIRSF001369 3 375 1.7E-119 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 8.3E-120 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 Gene3D G3DSA:1.10.580.10 16 263 6.1E-82 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 SUPERFAMILY SSF48256 10 375 1.57E-128 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 Gene3D G3DSA:1.10.580.10 302 355 1.2E-9 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 3.0E-155 T 29-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 328 342 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 198 226 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 251 271 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 176 191 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 308 324 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS22630 f7516b77540c1ebb85211446a67b448a 375 PRINTS PR00143 Citrate synthase signature 126 139 7.5E-41 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF52029 184 376 2.62E-83 T 29-03-2018 IPR027409 GroEL-like apical domain AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF48592 406 521 4.28E-75 T 29-03-2018 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF48592 7 134 4.28E-75 T 29-03-2018 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:1.10.560.10 374 516 3.8E-23 T 29-03-2018 IPR027413 GroEL-like equatorial domain AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 SUPERFAMILY SSF54849 137 203 3.43E-24 T 29-03-2018 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:3.50.7.10 186 373 2.9E-98 T 29-03-2018 IPR027409 GroEL-like apical domain AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 7.0E-94 T 29-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.624 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 29-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.5E-254 T 29-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM474_RS21470 87beb1e1996e1c4cd40de9f6725d007c 547 Gene3D G3DSA:1.10.560.10 1 185 1.6E-41 T 29-03-2018 IPR027413 GroEL-like equatorial domain AM474_RS18740 d8c23bf70c5b3958bbc6a9bd706075af 223 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 223 29.094 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM474_RS18740 d8c23bf70c5b3958bbc6a9bd706075af 223 PIRSF PIRSF009467 1 223 3.4E-57 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM474_RS18740 d8c23bf70c5b3958bbc6a9bd706075af 223 Pfam PF01730 UreF 35 181 4.0E-35 T 29-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 183 5.7E-23 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 SUPERFAMILY SSF56784 4 219 1.5E-51 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 Gene3D G3DSA:3.40.50.1000 75 226 1.7E-27 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 3.8E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 183 7.3E-17 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11875 45c8dbbb16092151000b4015e53f4ada 231 Gene3D G3DSA:1.10.150.240 20 74 1.0E-7 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.40.1390.10 6 91 1.5E-25 T 29-03-2018 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF53244 320 450 5.26E-34 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF53623 103 318 6.02E-53 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 451 33.894 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 450 2.5E-148 T 29-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF08245 Mur ligase middle domain 108 300 1.4E-47 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 SUPERFAMILY SSF63418 5 98 7.19E-25 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.90.190.20 320 458 1.5E-42 T 29-03-2018 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF01225 Mur ligase family, catalytic domain 26 94 1.1E-9 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 391 2.3E-12 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21310 c161d3a9062c2295ed1ea3b6ccd23432 458 Gene3D G3DSA:3.40.1190.10 92 318 4.8E-55 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:2.40.50.100 68 118 7.8E-11 T 29-03-2018 AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 366 2.3E-79 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 269 1.0E-34 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 SUPERFAMILY SSF111369 60 273 4.05E-45 T 29-03-2018 AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:2.40.50.100 151 201 6.4E-10 T 29-03-2018 AM474_RS21530 7684e0a8e272dbb6bdce47270d9d8c31 376 Gene3D G3DSA:1.10.287.470 119 150 1.6E-9 T 29-03-2018 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Gene3D G3DSA:3.90.1170.30 1 46 6.9E-12 T 29-03-2018 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 SUPERFAMILY SSF51230 1 96 6.41E-26 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Gene3D G3DSA:3.30.559.10 166 407 8.6E-87 T 29-03-2018 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Pfam PF00364 Biotin-requiring enzyme 4 76 3.3E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 409 3.8E-188 T 29-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 407 3.0E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Gene3D G3DSA:4.10.320.10 112 165 5.7E-19 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 SUPERFAMILY SSF47005 105 150 1.7E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Pfam PF02817 e3 binding domain 112 145 7.1E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 SUPERFAMILY SSF52777 179 408 1.33E-86 T 29-03-2018 AM474_RS27105 0e0fa44e5a3197894a26dd2a4b58df7a 409 Gene3D G3DSA:2.40.50.100 47 111 2.0E-4 T 29-03-2018 AM474_RS22870 e5bf7da03c004fe872e9bb237524d9d4 319 Gene3D G3DSA:3.30.1180.10 170 313 3.1E-20 T 29-03-2018 AM474_RS22870 e5bf7da03c004fe872e9bb237524d9d4 319 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 313 9.0E-78 T 29-03-2018 IPR003797 DegV AM474_RS22870 e5bf7da03c004fe872e9bb237524d9d4 319 Gene3D G3DSA:3.40.50.10170 1 168 2.5E-27 T 29-03-2018 AM474_RS22870 e5bf7da03c004fe872e9bb237524d9d4 319 SUPERFAMILY SSF82549 1 312 1.1E-47 T 29-03-2018 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 SUPERFAMILY SSF47203 229 377 3.22E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:1.20.140.10 218 385 1.6E-50 T 29-03-2018 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 5.7E-33 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:2.40.110.10 121 217 2.9E-40 T 29-03-2018 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 PIRSF PIRSF016578 3 82 10.0 T 29-03-2018 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 PIRSF PIRSF016578 125 362 4.9E-11 T 29-03-2018 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.5E-24 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 6.1E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 Gene3D G3DSA:1.10.540.10 1 120 3.2E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 SUPERFAMILY SSF56645 2 241 2.62E-82 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS03630 d915cc951a8e7aa3aac72b61548620ff 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 5 27 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 64 85 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 109 127 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 87 108 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 45 62 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PRINTS PR01004 Flagellar FliJ protein signature 127 147 3.6E-13 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 PIRSF PIRSF019404 1 147 2.5E-39 T 29-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 Pfam PF02050 Flagellar FliJ protein 21 141 2.5E-36 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM474_RS24430 71c5942098eb3dc8c5008f502d3d77ef 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 141 8.3E-33 T 29-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 SUPERFAMILY SSF55920 136 393 2.62E-69 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 Pfam PF00557 Metallopeptidase family M24 178 384 4.9E-50 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 Gene3D G3DSA:3.40.350.10 31 161 1.7E-20 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 169 1.2E-22 T 29-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 Gene3D G3DSA:3.90.230.10 162 400 3.5E-64 T 29-03-2018 AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 SUPERFAMILY SSF53092 15 169 1.17E-25 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM474_RS20895 6825e5ad97fa76bb32e10f08e77261cb 405 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 330 342 - T 29-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.495 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 1.3E-7 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 9.0E-38 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF46604 89 137 2.48E-11 T 29-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 SUPERFAMILY SSF51344 4 86 9.55E-24 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:1.20.5.440 91 131 4.7E-6 T 29-03-2018 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 4.3E-30 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 Gene3D G3DSA:2.60.15.10 2 90 1.7E-27 T 29-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14975 c708b21f2427fc71bcde751da15b347d 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.9E-45 T 29-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82693 38 130 1.8E-28 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82714 182 271 1.07E-22 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82866 808 1027 1.96E-46 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82693 567 671 1.31E-30 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:3.30.70.1430 569 670 1.6E-19 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:3.30.70.1440 674 768 1.2E-18 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:3.30.2090.10 180 275 2.9E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:1.20.1640.10 286 510 1.6E-46 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82693 135 182 2.04E-26 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82693 274 330 2.04E-26 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:3.30.70.1320 769 846 8.6E-6 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:1.20.1640.10 847 1029 1.7E-38 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 Gene3D G3DSA:3.30.70.1430 38 140 1.2E-29 T 29-03-2018 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82714 724 811 9.16E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 4.3E-113 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS12570 9c0dcf29a28231d766d59cb9274bb230 1046 SUPERFAMILY SSF82866 296 497 1.07E-49 T 29-03-2018 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF00501 AMP-binding enzyme 82 519 2.8E-91 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 642 54.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:2.30.38.10 425 512 3.6E-10 T 29-03-2018 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 640 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.40.50.980 72 263 2.1E-54 T 29-03-2018 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 3.8E-24 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 80 1.1E-21 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.40.50.980 264 424 2.4E-39 T 29-03-2018 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 Gene3D G3DSA:3.30.300.30 515 644 2.8E-25 T 29-03-2018 AM474_RS19585 8d35c8dda48ef0e779b679a433dbb081 645 SUPERFAMILY SSF56801 11 637 2.09E-185 T 29-03-2018 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF53041 1 142 8.37E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 SMART SM00857 2 143 2.3E-53 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:1.20.5.40 112 141 2.8E-17 T 29-03-2018 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 Pfam PF00239 Resolvase, N terminal domain 3 143 1.0E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:3.40.50.1390 1 111 1.9E-29 T 29-03-2018 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF46689 145 187 1.33E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26230 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:1.10.10.60 145 195 3.9E-7 T 29-03-2018 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF53041 1 142 8.37E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 SMART SM00857 2 143 2.3E-53 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:1.20.5.40 112 141 2.8E-17 T 29-03-2018 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 Pfam PF00239 Resolvase, N terminal domain 3 143 1.0E-41 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:3.40.50.1390 1 111 1.9E-29 T 29-03-2018 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 SUPERFAMILY SSF46689 145 187 1.33E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01795 3b27b10ddbcb0993db806be5e4d21cd2 204 Gene3D G3DSA:1.10.10.60 145 195 3.9E-7 T 29-03-2018 AM474_RS23065 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF46785 1 113 6.31E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23065 d269641effb5f63d36695e754020b81c 298 SUPERFAMILY SSF53850 90 295 1.96E-43 T 29-03-2018 AM474_RS23065 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:3.40.190.10 179 266 8.5E-22 T 29-03-2018 AM474_RS23065 d269641effb5f63d36695e754020b81c 298 Pfam PF03466 LysR substrate binding domain 91 293 9.2E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS23065 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:1.10.10.10 1 85 1.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23065 d269641effb5f63d36695e754020b81c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS23065 d269641effb5f63d36695e754020b81c 298 Gene3D G3DSA:3.40.190.10 89 178 1.2E-24 T 29-03-2018 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Pfam PF04542 Sigma-70 region 2 22 94 8.1E-20 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 PRINTS PR00046 Major sigma-70 factor signature 194 206 2.3E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 PRINTS PR00046 Major sigma-70 factor signature 211 226 2.3E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 PRINTS PR00046 Major sigma-70 factor signature 226 237 2.3E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 PRINTS PR00046 Major sigma-70 factor signature 49 62 2.3E-11 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 49 62 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 SUPERFAMILY SSF88659 96 163 9.59E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 241 3.9E-34 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Gene3D G3DSA:1.10.1740.10 6 92 1.7E-23 T 29-03-2018 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 SUPERFAMILY SSF88946 10 94 4.97E-26 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Pfam PF04539 Sigma-70 region 3 103 163 1.0E-9 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 8 244 68.114 T 29-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 PIRSF PIRSF000770 1 246 5.9E-36 T 29-03-2018 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 22 241 1.5E-82 T 29-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Pfam PF04545 Sigma-70, region 4 190 239 6.1E-19 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Gene3D G3DSA:1.10.10.10 96 145 3.0E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 Gene3D G3DSA:1.10.10.10 152 244 9.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26395 44e3cbd90fd4f72dbf9f8d56bf170d86 247 SUPERFAMILY SSF88659 163 244 1.44E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 SUPERFAMILY SSF46785 2 85 6.81E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 Gene3D G3DSA:3.40.190.10 180 256 2.5E-9 T 29-03-2018 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 1.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 Pfam PF03466 LysR substrate binding domain 90 290 1.2E-30 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.6E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 Gene3D G3DSA:1.10.10.10 1 85 3.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 Gene3D G3DSA:3.40.190.10 91 179 1.2E-17 T 29-03-2018 AM474_RS18225 bbd78acf272c8b071687b4913b3ff6b8 294 SUPERFAMILY SSF53850 91 292 1.24E-31 T 29-03-2018 AM474_RS18820 e4653b518844416529f3665cff0f5ddb 114 Gene3D G3DSA:3.30.1450.10 20 97 4.1E-5 T 29-03-2018 AM474_RS18820 e4653b518844416529f3665cff0f5ddb 114 Pfam PF04355 SmpA / OmlA family 31 97 4.0E-14 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.6E-23 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF54747 3 72 7.46E-30 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 5.0E-16 T 29-03-2018 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.661 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:1.10.10.250 73 141 1.2E-22 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.3E-29 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 SMART SM00649 9 141 5.8E-83 T 29-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 29-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 SUPERFAMILY SSF46906 68 141 9.68E-24 T 29-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 Gene3D G3DSA:3.30.1550.10 3 72 8.1E-35 T 29-03-2018 IPR020784 Ribosomal protein L11, N-terminal AM474_RS11225 289c47e462a79e6ce33182b3cb634261 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 29-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 SMART SM00881 4 100 1.5E-36 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF52210 123 289 1.16E-57 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 Pfam PF00549 CoA-ligase 151 270 6.1E-22 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 5.1E-39 T 29-03-2018 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 5.1E-39 T 29-03-2018 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 5.1E-39 T 29-03-2018 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 5.1E-39 T 29-03-2018 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 SUPERFAMILY SSF51735 1 122 1.93E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 29-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 Pfam PF02629 CoA binding domain 6 99 7.8E-32 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.720 1 119 2.6E-44 T 29-03-2018 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 7.7E-145 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.831 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 29-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 PIRSF PIRSF001553 1 290 1.3E-133 T 29-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27120 25b3afda26f1b15efac299242e14f132 295 Gene3D G3DSA:3.40.50.261 120 295 3.5E-56 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 9.5E-139 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.30.590.10 105 458 6.3E-124 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 29-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF55931 102 468 1.96E-136 T 29-03-2018 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 Gene3D G3DSA:3.10.20.70 3 104 1.2E-27 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 29-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.9E-204 T 29-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 SUPERFAMILY SSF54368 7 100 1.96E-33 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 95 5.9E-30 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS17270 ae42b588c2bd3f01596a2cc992f2531e 469 SMART SM01230 102 379 7.5E-147 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 SUPERFAMILY SSF52172 3 180 6.83E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00072 Response regulator receiver domain 5 114 3.6E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00862 146 220 6.7E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 SMART SM00448 3 114 3.1E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:1.10.10.10 124 223 9.3E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04600 132dc319853087e4bb9fa36c481b13ba 223 Gene3D G3DSA:3.40.50.2300 1 123 9.4E-35 T 29-03-2018 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 SUPERFAMILY SSF52518 369 547 1.32E-56 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Gene3D G3DSA:3.40.50.970 1 192 1.9E-53 T 29-03-2018 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 SUPERFAMILY SSF52467 160 356 3.74E-38 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 SUPERFAMILY SSF52518 7 182 2.27E-55 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 171 4.3E-55 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Gene3D G3DSA:3.40.50.970 348 551 2.1E-42 T 29-03-2018 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 332 1.4E-28 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 537 3.4E-42 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS29495 921ffa4527b2f5959443d23d17b2d88b 552 Gene3D G3DSA:3.40.50.1220 193 347 2.4E-36 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS15885 358067f3f868811729db1db013ed01f4 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 281 1.1E-63 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS15885 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.10 156 312 3.8E-37 T 29-03-2018 AM474_RS15885 358067f3f868811729db1db013ed01f4 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 307 2.3E-149 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AM474_RS15885 358067f3f868811729db1db013ed01f4 312 Gene3D G3DSA:3.40.190.10 21 155 3.6E-22 T 29-03-2018 AM474_RS15885 358067f3f868811729db1db013ed01f4 312 SUPERFAMILY SSF53850 21 298 3.53E-92 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 SMART SM00968 520 615 6.9E-10 T 29-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1153 0.0 T 29-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:1.20.120.330 339 504 0.27 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1155 23.398 T 29-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 SUPERFAMILY SSF52540 1 217 1.46E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 SUPERFAMILY SSF52540 1052 1138 1.46E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 PIRSF PIRSF005719 1 1162 6.4E-267 T 29-03-2018 IPR024704 Structural maintenance of chromosomes protein AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:1.20.5.340 832 921 0.0013 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:1.20.5.170 754 831 0.048 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:1.20.5.170 656 753 0.0017 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:1.20.5.170 237 337 0.0031 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:3.40.50.300 1 183 4.0E-36 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 SUPERFAMILY SSF75553 469 662 1.83E-6 T 29-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Gene3D G3DSA:3.40.50.300 922 1162 1.3E-28 T 29-03-2018 AM474_RS26760 7e22598dea976cf59578fd2d91548424 1162 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1146 4.8E-68 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 SUPERFAMILY SSF51735 5 250 6.86E-72 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 3.0E-4 T 29-03-2018 AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 Gene3D G3DSA:3.40.50.720 46 252 9.8E-61 T 29-03-2018 AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 Gene3D G3DSA:3.40.50.720 1 45 1.0E-7 T 29-03-2018 AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.1E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.3E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 249 6.0E-59 T 29-03-2018 AM474_RS15140 8eed48be68580a7c938f442e7c783aa1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 112 4.2E-39 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:3.90.226.10 838 1088 8.8E-55 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:2.40.50.100 477 564 3.1E-13 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF52096 807 1075 4.97E-66 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF52096 581 838 1.33E-48 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SMART SM00878 343 451 4.5E-46 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 327 1.1E-57 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:3.30.470.20 213 454 1.0E-85 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Pfam PF01039 Carboxyl transferase domain 605 1077 2.1E-70 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:3.40.50.20 5 125 3.5E-44 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Pfam PF02785 Biotin carboxylase C-terminal domain 343 451 9.4E-29 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF56059 85 334 1.77E-56 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF52440 4 114 1.65E-38 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 514 531 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF51230 486 558 1.44E-14 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:3.90.226.10 565 836 7.5E-45 T 29-03-2018 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Gene3D G3DSA:3.30.1490.20 126 212 7.6E-14 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 Pfam PF00364 Biotin-requiring enzyme 493 555 3.2E-11 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS26055 8609b7ac57a1177190febb853d2893ab 1095 SUPERFAMILY SSF51246 338 457 6.28E-30 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS25105 1327eaaf10a68752addf7f7bad1531d7 346 SUPERFAMILY SSF55909 4 341 2.5E-114 T 29-03-2018 AM474_RS25105 1327eaaf10a68752addf7f7bad1531d7 346 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 9 340 4.6E-108 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM474_RS25105 1327eaaf10a68752addf7f7bad1531d7 346 Gene3D G3DSA:3.75.10.10 2 345 2.4E-116 T 29-03-2018 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 SMART SM01134 72 232 2.3E-72 T 29-03-2018 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 Gene3D G3DSA:1.10.10.10 1 68 2.9E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 Gene3D G3DSA:3.40.50.1360 69 234 1.3E-40 T 29-03-2018 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 SMART SM00420 6 58 3.9E-22 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 SUPERFAMILY SSF100950 74 232 4.95E-31 T 29-03-2018 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 SUPERFAMILY SSF46785 3 68 2.46E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-12 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.8E-53 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.0E-21 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS07265 26da6b4f0ec1b2dbc7986512057e689f 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 Gene3D G3DSA:2.60.40.10 144 237 5.4E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 141 6.7E-40 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 229 1.3E-17 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 SUPERFAMILY SSF49354 20 141 2.88E-39 T 29-03-2018 IPR008962 PapD-like AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 123 138 1.5E-25 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 162 177 1.5E-25 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 26 35 1.5E-25 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 72 93 1.5E-25 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 PRINTS PR00969 Pili chaperone signature 100 117 1.5E-25 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 Gene3D G3DSA:2.60.40.10 25 142 5.6E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS23805 7aaf90a3e9283e4ba93fed0347f534e8 237 SUPERFAMILY SSF49584 135 232 1.28E-16 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 Gene3D G3DSA:3.40.50.300 91 321 1.6E-65 T 29-03-2018 AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 6.9E-100 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 Pfam PF01883 Iron-sulfur cluster assembly protein 6 79 5.8E-16 T 29-03-2018 IPR002744 MIP18 family-like AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF117916 4 82 1.05E-14 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 36.457 T 29-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 Gene3D G3DSA:3.30.300.130 2 90 3.8E-11 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 SUPERFAMILY SSF52540 89 327 8.55E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06820 8c7d16f6a0192b115a98939d62e0d3fe 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 29-03-2018 IPR000808 Mrp, conserved site GO:0005524 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.9E-40 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 Pfam PF00849 RNA pseudouridylate synthase 62 190 7.1E-13 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 SMART SM00363 1 58 1.2E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.10.290.10 1 57 7.1E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.30.70.1560 141 209 2.7E-20 T 29-03-2018 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 Gene3D G3DSA:3.30.70.580 58 140 2.5E-13 T 29-03-2018 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 SUPERFAMILY SSF55174 1 90 4.71E-14 T 29-03-2018 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 Pfam PF01479 S4 domain 1 42 3.4E-8 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS22295 835090ab42d2bb23457339583ee6981e 230 SUPERFAMILY SSF55120 61 227 1.22E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS24710 8149226e27f89322a315f1da0e25cab8 177 SUPERFAMILY SSF143422 1 138 3.66E-36 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS24710 8149226e27f89322a315f1da0e25cab8 177 Gene3D G3DSA:3.30.70.1290 1 139 9.2E-36 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS24710 8149226e27f89322a315f1da0e25cab8 177 SMART SM01321 9 132 9.9E-41 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS24710 8149226e27f89322a315f1da0e25cab8 177 Pfam PF01797 Transposase IS200 like 14 130 5.4E-8 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS26595 573289e873c0e40ebe88818f0a197911 208 PIRSF PIRSF035170 1 207 1.7E-82 T 29-03-2018 IPR009218 Predicted HD phosphohydrolase AM474_RS26595 573289e873c0e40ebe88818f0a197911 208 Gene3D G3DSA:1.10.472.50 21 114 9.6E-6 T 29-03-2018 AM474_RS26595 573289e873c0e40ebe88818f0a197911 208 SUPERFAMILY SSF109604 23 194 3.98E-19 T 29-03-2018 AM474_RS32320 49b83dc75e45974f6f3e39937e45670f 441 Gene3D G3DSA:3.30.2290.10 1 236 1.0E-18 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM474_RS32320 49b83dc75e45974f6f3e39937e45670f 441 Pfam PF01523 Putative modulator of DNA gyrase 28 301 1.1E-28 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS32320 49b83dc75e45974f6f3e39937e45670f 441 SUPERFAMILY SSF111283 1 440 2.49E-73 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS04010 c7f2cad3acf7049e0e4c335f619b8e22 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 30.163 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM474_RS04010 c7f2cad3acf7049e0e4c335f619b8e22 210 Gene3D G3DSA:3.40.50.300 1 205 5.7E-54 T 29-03-2018 AM474_RS04010 c7f2cad3acf7049e0e4c335f619b8e22 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 195 1.8E-52 T 29-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM474_RS04010 c7f2cad3acf7049e0e4c335f619b8e22 210 SUPERFAMILY SSF52540 3 207 1.93E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04010 c7f2cad3acf7049e0e4c335f619b8e22 210 Pfam PF02223 Thymidylate kinase 8 195 4.3E-48 T 29-03-2018 AM474_RS13600 84f34782e1485126e16924cf7275147a 347 SUPERFAMILY SSF55347 124 273 2.94E-29 T 29-03-2018 AM474_RS13600 84f34782e1485126e16924cf7275147a 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 4.9E-20 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM474_RS13600 84f34782e1485126e16924cf7275147a 347 Gene3D G3DSA:3.40.50.720 2 131 7.4E-36 T 29-03-2018 AM474_RS13600 84f34782e1485126e16924cf7275147a 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 224 2.4E-11 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM474_RS13600 84f34782e1485126e16924cf7275147a 347 SUPERFAMILY SSF51735 3 151 4.54E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS13600 84f34782e1485126e16924cf7275147a 347 Gene3D G3DSA:3.30.360.10 132 345 8.6E-45 T 29-03-2018 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 55 78 3.1E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 111 207 3.1E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 PIRSF PIRSF000006 1 305 6.0E-107 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 304 1.0E-79 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 215 304 1.72E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 212 308 5.9E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.2E-23 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 205 1.2E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 298 1.8E-12 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26915 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 95 211 8.6E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 55 78 3.1E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 111 207 3.1E-29 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 PIRSF PIRSF000006 1 305 6.0E-107 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 35 304 1.0E-79 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 SUPERFAMILY SSF46626 215 304 1.72E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 212 308 5.9E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 2.2E-23 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 205 1.2E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 298 1.8E-12 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26935 1bce36d9f697a37d10d72f9dd140f5d0 308 Gene3D G3DSA:1.10.760.10 95 211 8.6E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20835 2cad93687b43393772b0d95a71cffbe7 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 6 294 4.1E-74 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS20835 2cad93687b43393772b0d95a71cffbe7 309 SMART SM00797 25 307 1.1E-119 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS20835 2cad93687b43393772b0d95a71cffbe7 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 289 1.0E-77 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS20835 2cad93687b43393772b0d95a71cffbe7 309 SUPERFAMILY SSF50891 184 293 9.1E-9 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS21845 f8b2d1fc87a90929334781190f3b50c4 333 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 37 315 3.0E-20 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM474_RS21845 f8b2d1fc87a90929334781190f3b50c4 333 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 309 9.8E-41 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF01842 ACT domain 268 325 2.9E-10 T 29-03-2018 IPR002912 ACT domain AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 3.7E-131 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.30.70.260 235 330 2.6E-24 T 29-03-2018 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 249 327 1.4E-17 T 29-03-2018 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF55021 332 405 4.37E-25 T 29-03-2018 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 403 1.8E-117 T 29-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.30.70.260 331 403 1.5E-22 T 29-03-2018 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF13840 ACT domain 339 399 1.8E-15 T 29-03-2018 IPR027795 GATS-like ACT domain AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 PIRSF PIRSF000726 57 411 3.3E-153 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 PIRSF PIRSF000726 1 62 7.8E-24 T 29-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Gene3D G3DSA:3.40.1160.10 1 234 1.7E-73 T 29-03-2018 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 Pfam PF00696 Amino acid kinase family 3 229 5.7E-49 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 29-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS23200 e938cfecf68233c7f3f8b42446c07b92 412 SUPERFAMILY SSF53633 4 241 1.31E-75 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Pfam PF02911 Formyl transferase, C-terminal domain 204 279 1.3E-15 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Gene3D G3DSA:3.40.50.720 316 660 3.5E-48 T 29-03-2018 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Pfam PF01370 NAD dependent epimerase/dehydratase family 320 567 4.8E-44 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 SUPERFAMILY SSF53328 5 204 1.57E-54 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 SUPERFAMILY SSF51735 319 652 3.72E-71 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 3 661 61.338 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Gene3D G3DSA:3.40.50.170 2 204 3.2E-49 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Pfam PF00551 Formyl transferase 28 175 5.3E-26 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 Gene3D G3DSA:3.10.25.10 205 308 1.9E-18 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 SUPERFAMILY SSF50486 207 300 6.75E-21 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM474_RS07100 18b4084b81a53ca16dfaea566419506c 662 PIRSF PIRSF036506 3 661 0.0 T 29-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 395 695 4.3E-125 T 29-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF07085 DRTGG domain 223 335 2.4E-31 T 29-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.1390.20 220 356 2.4E-29 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF01515 Phosphate acetyl/butaryl transferase 380 695 6.8E-118 T 29-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Pfam PF13500 AAA domain 2 219 3.5E-33 T 29-03-2018 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.50.10750 518 671 6.6E-61 T 29-03-2018 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 PIRSF PIRSF006107 1 703 0.0 T 29-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF53659 381 698 1.15E-88 T 29-03-2018 AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF52540 1 229 1.13E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 SUPERFAMILY SSF75138 220 343 3.92E-25 T 29-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like AM474_RS22835 fae20079973ee081b6e5399ecd803a4c 704 Gene3D G3DSA:3.40.50.300 1 219 8.4E-39 T 29-03-2018 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 329 40.501 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 SMART SM00729 13 216 7.8E-12 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF04055 Radical SAM superfamily 18 177 6.8E-30 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 1.1E-111 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF13353 4Fe-4S single cluster domain 20 108 7.0E-8 T 29-03-2018 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 Gene3D G3DSA:3.20.20.70 1 329 2.8E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 184 312 3.2E-38 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AM474_RS09065 016fcd2c3fb6f303c1f15860b5e371cb 329 SUPERFAMILY SSF102114 5 280 1.57E-74 T 29-03-2018 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 285 42.906 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 SUPERFAMILY SSF53328 92 284 3.53E-59 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.30.70.260 3 95 3.0E-11 T 29-03-2018 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PIRSF PIRSF036480 5 285 6.7E-97 T 29-03-2018 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 1.6E-43 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 Gene3D G3DSA:3.40.50.170 96 285 1.6E-51 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS15675 b89286601533ceb56e4daa65caa484ea 285 Pfam PF00551 Formyl transferase 91 266 6.3E-36 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS01095 648b60392d461c19598f4498bb20b143 269 Gene3D G3DSA:3.40.50.150 8 254 4.5E-21 T 29-03-2018 AM474_RS01095 648b60392d461c19598f4498bb20b143 269 SUPERFAMILY SSF53335 55 201 6.17E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS01095 648b60392d461c19598f4498bb20b143 269 Pfam PF08241 Methyltransferase domain 68 162 2.9E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS08310 ca1fd866255868ab6e5e4c1267dd564b 64 Pfam PF00403 Heavy-metal-associated domain 3 59 2.7E-12 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS08310 ca1fd866255868ab6e5e4c1267dd564b 64 Gene3D G3DSA:3.30.70.100 1 61 7.1E-14 T 29-03-2018 AM474_RS08310 ca1fd866255868ab6e5e4c1267dd564b 64 SUPERFAMILY SSF55008 2 61 1.57E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:3.40.190.10 98 180 2.2E-19 T 29-03-2018 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 Pfam PF03466 LysR substrate binding domain 94 295 2.9E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 SUPERFAMILY SSF46785 4 117 5.75E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:1.10.10.10 4 88 2.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.8E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 SUPERFAMILY SSF53850 94 299 3.08E-41 T 29-03-2018 AM474_RS18630 4d9d8fec38259cab6d25001179998632 312 Gene3D G3DSA:3.40.190.10 181 266 5.0E-21 T 29-03-2018 AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 Pfam PF01614 Bacterial transcriptional regulator 151 275 3.0E-37 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF55781 98 277 4.56E-49 T 29-03-2018 IPR029016 GAF domain-like AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:3.30.450.40 101 279 8.5E-53 T 29-03-2018 IPR029016 GAF domain-like AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 30 276 1.6E-101 T 29-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 Gene3D G3DSA:1.10.10.10 26 100 1.2E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 SMART SM00346 33 121 3.0E-33 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 Pfam PF09339 IclR helix-turn-helix domain 35 86 2.2E-14 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS13995 f415c69555febf633db2d5733a5d776d 279 SUPERFAMILY SSF46785 34 105 4.76E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 Gene3D G3DSA:1.10.10.10 1 83 7.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 Gene3D G3DSA:3.40.190.10 92 175 2.5E-17 T 29-03-2018 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 Pfam PF03466 LysR substrate binding domain 89 291 4.6E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 SUPERFAMILY SSF53850 89 292 5.43E-38 T 29-03-2018 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 Gene3D G3DSA:3.40.190.10 176 263 4.9E-24 T 29-03-2018 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 SUPERFAMILY SSF46785 1 111 9.62E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29595 4da5da6de32e295b41edce20d26a6f29 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 SUPERFAMILY SSF48452 529 607 9.11E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 Gene3D G3DSA:3.10.350.10 170 233 2.6E-10 T 29-03-2018 AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 Gene3D G3DSA:1.25.40.10 523 924 1.6E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 Gene3D G3DSA:1.20.5.170 234 394 3.9E-5 T 29-03-2018 AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 SMART SM00257 175 230 0.0037 T 29-03-2018 IPR018392 LysM domain AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 880 923 1.9E-21 T 29-03-2018 IPR020011 Motility protein FimV, C-terminal AM474_RS04810 e3c9cac27af0ce98ee1aa9f2babd5a4d 924 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 182 254 1.2E-30 T 29-03-2018 IPR020012 Motility protein FimV, N-terminal AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 Pfam PF00155 Aminotransferase class I and II 105 461 1.1E-36 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.6E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 Gene3D G3DSA:3.90.1150.10 372 467 2.1E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 SUPERFAMILY SSF46785 1 74 4.31E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 Gene3D G3DSA:3.40.640.10 124 371 6.3E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 SUPERFAMILY SSF53383 86 463 1.65E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 SMART SM00345 7 66 7.5E-21 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS29480 0f0c6d5329035e8246ad84ee62a90577 474 Gene3D G3DSA:1.10.10.10 1 67 2.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 Gene3D G3DSA:3.90.76.10 62 204 1.1E-22 T 29-03-2018 AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 Gene3D G3DSA:3.10.105.10 318 561 1.7E-49 T 29-03-2018 AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 PIRSF PIRSF002741 5 594 3.2E-104 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 SUPERFAMILY SSF53850 48 590 3.44E-116 T 29-03-2018 AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 505 9.4E-71 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS29605 dd5c2643d286d55f5e7dc9cd61b848b0 602 Gene3D G3DSA:3.40.190.10 205 317 9.5E-20 T 29-03-2018 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 Pfam PF03129 Anticodon binding domain 335 422 2.0E-8 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 Gene3D G3DSA:3.40.50.800 328 429 1.2E-17 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 Pfam PF13393 Histidyl-tRNA synthetase 10 313 7.1E-45 T 29-03-2018 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 Gene3D G3DSA:3.30.930.10 2 324 1.3E-71 T 29-03-2018 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 2.6E-152 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 PIRSF PIRSF001549 2 425 1.8E-115 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 33.279 T 29-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 SUPERFAMILY SSF55681 6 323 6.7E-102 T 29-03-2018 AM474_RS08710 2e0a41db5348ecf9f4202b6cc61092f8 429 SUPERFAMILY SSF52954 330 425 5.4E-23 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF52172 3 125 2.85E-44 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:3.40.50.2300 2 124 1.6E-37 T 29-03-2018 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 SUPERFAMILY SSF46894 128 226 7.11E-29 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00862 151 225 6.4E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 Gene3D G3DSA:1.10.10.10 125 229 2.8E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.4E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 226 3.5E-109 T 29-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AM474_RS16005 3b61ef0ae834381c5006c92e8233f6e5 229 SMART SM00448 4 117 8.3E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF53850 90 301 2.9E-47 T 29-03-2018 AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 175 264 1.1E-28 T 29-03-2018 AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:1.10.10.10 1 85 1.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 Pfam PF03466 LysR substrate binding domain 91 296 4.0E-49 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 Gene3D G3DSA:3.40.190.10 91 174 4.5E-11 T 29-03-2018 AM474_RS24985 a86a44e66dd65ef524b13a551a6aff75 304 SUPERFAMILY SSF46785 2 112 9.41E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 Gene3D G3DSA:2.40.170.20 278 804 2.8E-69 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 SUPERFAMILY SSF56935 157 804 1.29E-110 T 29-03-2018 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 Gene3D G3DSA:2.170.130.10 117 277 2.7E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 162 260 1.9E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 787 804 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 Pfam PF07660 Secretin and TonB N terminus short domain 65 115 3.4E-7 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 SMART SM00965 65 116 2.8E-14 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 Pfam PF00593 TonB dependent receptor 383 801 2.6E-41 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS28855 698b28522954858aa1c9d93c0357778a 804 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 164 804 6.4E-111 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 SUPERFAMILY SSF52540 3 166 4.21E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 Gene3D G3DSA:3.40.50.300 2 171 7.5E-32 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 29.419 T 29-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 28 41 3.2E-24 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 95 112 3.2E-24 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 56 64 3.2E-24 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 4 19 3.2E-24 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 PRINTS PR01100 Shikimate kinase family signature 74 83 3.2E-24 T 29-03-2018 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 Pfam PF01202 Shikimate kinase 10 166 1.8E-55 T 29-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM474_RS17960 136bbde33741f015c5ac556f2224b4f1 172 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 29-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AM474_RS13675 e34192f4bc1ba2af006f0a70b1aae745 352 Gene3D G3DSA:3.40.190.10 147 305 1.1E-30 T 29-03-2018 AM474_RS13675 e34192f4bc1ba2af006f0a70b1aae745 352 Pfam PF13416 Bacterial extracellular solute-binding protein 51 316 8.6E-42 T 29-03-2018 AM474_RS13675 e34192f4bc1ba2af006f0a70b1aae745 352 SUPERFAMILY SSF53850 31 349 1.22E-63 T 29-03-2018 AM474_RS13675 e34192f4bc1ba2af006f0a70b1aae745 352 Gene3D G3DSA:3.40.190.10 23 146 5.4E-11 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF81653 237 334 2.48E-22 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Gene3D G3DSA:3.40.50.1000 561 702 5.8E-36 T 29-03-2018 IPR023214 HAD-like domain AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Gene3D G3DSA:3.40.1110.10 452 560 1.5E-26 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 648 2.7E-41 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF55008 43 113 6.17E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00941 Cadmium-transporting ATPase signature 219 239 1.6E-10 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00941 Cadmium-transporting ATPase signature 300 316 1.6E-10 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00941 Cadmium-transporting ATPase signature 319 333 1.6E-10 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Gene3D G3DSA:1.20.1110.10 185 451 3.7E-36 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 437 443 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 534 710 1.4E-38 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 460 6.6E-37 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 184 737 4.3E-175 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF56784 434 453 5.26E-52 T 29-03-2018 IPR023214 HAD-like domain AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF56784 492 734 5.26E-52 T 29-03-2018 IPR023214 HAD-like domain AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 591 6.6E-21 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 670 6.6E-21 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 6.6E-21 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 284 298 6.6E-21 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 653 6.6E-21 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF81665 185 238 3.27E-14 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 SUPERFAMILY SSF81665 335 422 3.27E-14 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Gene3D G3DSA:3.30.70.100 37 118 4.1E-6 T 29-03-2018 AM474_RS07810 66585339d1e129fe9252804b16f7bfc3 742 Pfam PF00122 E1-E2 ATPase 235 414 1.9E-54 T 29-03-2018 AM474_RS26400 dfe8f2191185e18b44ff649561c51b98 124 SUPERFAMILY SSF52172 1 121 5.41E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS26400 dfe8f2191185e18b44ff649561c51b98 124 Pfam PF00072 Response regulator receiver domain 3 116 3.2E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26400 dfe8f2191185e18b44ff649561c51b98 124 Gene3D G3DSA:3.40.50.2300 1 123 6.5E-37 T 29-03-2018 AM474_RS26400 dfe8f2191185e18b44ff649561c51b98 124 SMART SM00448 1 115 4.9E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 SUPERFAMILY SSF55874 493 551 8.18E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 SUPERFAMILY SSF55874 443 462 8.18E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 SMART SM00331 186 386 4.9E-6 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 198 386 4.1E-39 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF00072 Response regulator receiver domain 13 124 1.7E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Pfam PF13581 Histidine kinase-like ATPase domain 494 563 2.2E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 SUPERFAMILY SSF52172 10 150 1.71E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.30.565.10 425 564 1.9E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 SMART SM00448 11 124 4.2E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.40.50.2300 5 173 4.9E-39 T 29-03-2018 AM474_RS06070 c18d215688bbeca2a7c98b03b35032b2 571 Gene3D G3DSA:3.60.40.10 174 393 2.2E-17 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 SUPERFAMILY SSF160920 10 259 4.18E-102 T 29-03-2018 AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 Gene3D G3DSA:3.40.1640.10 205 263 2.0E-6 T 29-03-2018 AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 Gene3D G3DSA:3.40.1640.10 3 168 2.8E-58 T 29-03-2018 AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 Pfam PF07286 Protein of unknown function (DUF1445) 117 259 4.5E-60 T 29-03-2018 IPR009906 D-glutamate cyclase AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 Hamap MF_01830 UPF0317 protein . 13 264 49.741 T 29-03-2018 IPR016938 Uncharacterised protein family UPF0317 AM474_RS29880 3fb56aa5d95e09b684999c40a583089d 265 PIRSF PIRSF029755 3 265 2.4E-114 T 29-03-2018 IPR016938 Uncharacterised protein family UPF0317 AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 166 0.0016 T 29-03-2018 AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 Gene3D G3DSA:3.40.50.720 2 252 1.6E-51 T 29-03-2018 AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.2E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.2E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.2E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.2E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.2E-19 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.6E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 6.6E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 6.6E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 SUPERFAMILY SSF51735 3 247 4.23E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS29830 df4b12c04efbf8b627e90c323a93b847 252 Pfam PF00106 short chain dehydrogenase 3 184 1.0E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52518 357 558 9.9E-56 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 2.4E-41 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52467 181 346 1.17E-41 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.970 1 184 3.0E-43 T 29-03-2018 AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 318 1.4E-29 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 SUPERFAMILY SSF52518 4 182 1.1E-44 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.970 331 535 1.1E-35 T 29-03-2018 AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Gene3D G3DSA:3.40.50.1220 185 330 2.0E-35 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS16325 4113c9aabec1a5ef6e9c27819ac5a0b7 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.8E-36 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 Pfam PF00561 alpha/beta hydrolase fold 22 246 2.1E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 5.2E-98 T 29-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 2.2E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.2E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.2E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.2E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 SUPERFAMILY SSF53474 2 260 6.15E-61 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13630 619d9bfef0cb931694d238a1a063363e 263 Gene3D G3DSA:3.40.50.1820 3 262 1.7E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 Gene3D G3DSA:1.10.10.10 258 279 0.026 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 Gene3D G3DSA:1.10.10.60 280 331 5.1E-17 T 29-03-2018 AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 Pfam PF12833 Helix-turn-helix domain 252 329 7.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.1E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.1E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 SMART SM00342 245 328 1.7E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 Gene3D G3DSA:1.10.10.10 228 257 0.0088 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 203 5.0E-48 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS24850 e9094253d07b48bd5ea530a904a9678a 333 SUPERFAMILY SSF46689 281 330 1.43E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.30.559.10 2 188 9.4E-23 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.30.559.10 1022 1228 6.7E-26 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF56801 1472 2001 2.35E-129 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.30.300.30 1872 1992 1.6E-26 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.30.300.30 847 959 2.1E-35 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00550 Phosphopantetheine attachment site 958 1020 3.0E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00550 Phosphopantetheine attachment site 1992 2055 2.2E-12 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF52777 1227 1458 2.56E-35 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00975 Thioesterase domain 2078 2337 2.5E-32 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1617 1628 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SMART SM00823 Phosphopantetheine attachment site 1987 2059 3.6E-6 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SMART SM00823 Phosphopantetheine attachment site 956 1024 0.0018 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 ProSitePatterns PS00012 Phosphopantetheine attachment site. 980 995 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00668 Condensation domain 7 430 4.9E-54 T 29-03-2018 IPR001242 Condensation domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00668 Condensation domain 1057 1458 1.3E-41 T 29-03-2018 IPR001242 Condensation domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.40.50.980 597 761 3.7E-40 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.40.50.980 1623 1784 2.6E-28 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:2.30.38.10 762 842 3.0E-25 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:2.30.38.10 1788 1867 1.9E-23 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF56801 413 969 3.4E-157 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 ProSitePatterns PS00455 Putative AMP-binding domain signature. 591 602 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF13193 AMP-binding enzyme C-terminal domain 860 933 2.9E-9 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF52777 186 436 6.11E-36 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.40.50.980 442 596 8.2E-48 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.40.50.980 1476 1622 3.5E-38 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF47336 949 1020 2.75E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 473 876 1.6E-135 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1502 1894 2.0E-108 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:1.10.1200.10 960 1021 3.1E-20 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:1.10.1200.10 1993 2063 1.9E-18 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Gene3D G3DSA:3.40.50.1820 2064 2342 1.2E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00501 AMP-binding enzyme 1481 1877 9.9E-81 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 Pfam PF00501 AMP-binding enzyme 451 852 6.0E-101 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF52777 9 167 6.11E-25 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF52777 1045 1238 1.01E-25 T 29-03-2018 AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF47336 1982 2056 1.7E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS05970 6a48f9e509cdbd7281edc3d37be744a7 2352 SUPERFAMILY SSF53474 2056 2341 3.69E-62 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 284 772 7.7E-68 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 7 89 5.4E-28 T 29-03-2018 IPR021993 Putative metal-binding domain of cation transport ATPase AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 708 8.9E-33 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF81665 262 309 4.71E-8 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF81665 411 501 4.71E-8 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Gene3D G3DSA:3.30.70.100 91 158 4.2E-15 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF55008 87 164 6.68E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 276 797 4.6E-113 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 796 2.8E-154 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Gene3D G3DSA:3.40.1110.10 521 659 1.1E-23 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00941 Cadmium-transporting ATPase signature 97 106 4.7E-5 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00941 Cadmium-transporting ATPase signature 376 392 4.7E-5 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00941 Cadmium-transporting ATPase signature 108 129 4.7E-5 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF56784 558 794 3.49E-50 T 29-03-2018 IPR023214 HAD-like domain AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF56784 506 526 3.49E-50 T 29-03-2018 IPR023214 HAD-like domain AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Gene3D G3DSA:1.20.1110.10 159 520 3.4E-36 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 5.0E-21 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 5.0E-21 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 5.0E-21 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 522 5.0E-21 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 5.0E-21 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Pfam PF00403 Heavy-metal-associated domain 97 156 1.1E-8 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 510 516 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Pfam PF00122 E1-E2 ATPase 310 487 1.0E-47 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 SUPERFAMILY SSF81653 323 409 3.4E-22 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 231 796 2.6E-139 T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 ProSitePatterns PS01229 Hypothetical cof family signature 2. 694 716 - T 29-03-2018 AM474_RS26875 bf4462705c959555b24ae6b6e846b468 811 Gene3D G3DSA:1.20.1110.10 660 795 9.2E-26 T 29-03-2018 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 135 8.5E-17 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Gene3D G3DSA:3.30.365.10 588 734 1.9E-42 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Gene3D G3DSA:3.30.365.10 266 432 3.5E-31 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 SUPERFAMILY SSF56003 136 733 9.68E-159 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 SUPERFAMILY SSF54665 7 147 8.9E-33 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Gene3D G3DSA:3.30.365.10 158 265 2.1E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 151 675 1.4E-108 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 SMART SM01008 22 136 2.0E-35 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Gene3D G3DSA:3.90.1170.50 5 136 2.4E-30 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28980 7d19232f694512cd34555dc71cf9a407 734 Gene3D G3DSA:3.30.365.10 433 587 2.1E-33 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:3.40.190.10 308 439 1.3E-7 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SUPERFAMILY SSF55874 663 833 1.24E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:3.40.190.10 440 504 1.3E-7 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SUPERFAMILY SSF53850 87 286 2.34E-28 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:3.30.565.10 656 836 2.1E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SUPERFAMILY SSF53850 320 547 1.42E-24 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Pfam PF00512 His Kinase A (phospho-acceptor) domain 608 673 3.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SMART SM00448 862 978 1.6E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:1.10.287.130 597 655 1.9E-13 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SMART SM00062 324 550 5.3E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SMART SM00062 86 292 4.2E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SUPERFAMILY SSF52172 862 979 8.82E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 721 833 3.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Pfam PF00072 Response regulator receiver domain 864 978 5.2E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:3.40.190.10 75 236 3.5E-11 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 339 547 1.1E-16 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 92 284 2.0E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SMART SM00387 720 835 1.7E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SMART SM00388 607 673 2.7E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 Gene3D G3DSA:3.40.50.2300 849 980 6.3E-37 T 29-03-2018 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 774 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 788 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 813 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 832 3.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00230 a5a819f198d127b39c66b955def10ad1 992 SUPERFAMILY SSF47384 593 674 1.31E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19065 2441898717ffd1331b1821741b40113a 179 Pfam PF03061 Thioesterase superfamily 88 165 1.1E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS19065 2441898717ffd1331b1821741b40113a 179 Gene3D G3DSA:3.10.129.10 40 176 1.5E-31 T 29-03-2018 AM474_RS19065 2441898717ffd1331b1821741b40113a 179 SUPERFAMILY SSF54637 8 173 1.35E-36 T 29-03-2018 IPR029069 HotDog domain AM474_RS19065 2441898717ffd1331b1821741b40113a 179 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 78 173 1.4E-23 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS13400 92c57876b4731e1973c392cf9a0d03d9 135 SUPERFAMILY SSF51182 31 117 1.15E-17 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS13400 92c57876b4731e1973c392cf9a0d03d9 135 Pfam PF07883 Cupin domain 48 117 2.7E-15 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS13400 92c57876b4731e1973c392cf9a0d03d9 135 Gene3D G3DSA:2.60.120.10 18 126 2.4E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS09140 d59b6a49f229abb27d1d26b95a07fab9 218 Pfam PF03162 Tyrosine phosphatase family 51 163 2.5E-8 T 29-03-2018 IPR004861 Protein-tyrosine phosphatase, SIW14-like AM474_RS09140 d59b6a49f229abb27d1d26b95a07fab9 218 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 130 140 - T 29-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AM474_RS09140 d59b6a49f229abb27d1d26b95a07fab9 218 Gene3D G3DSA:3.90.190.10 33 167 2.8E-23 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM474_RS09140 d59b6a49f229abb27d1d26b95a07fab9 218 SUPERFAMILY SSF52799 44 164 3.13E-22 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 SUPERFAMILY SSF46785 1 85 2.36E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 SUPERFAMILY SSF53850 87 293 2.17E-34 T 29-03-2018 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 Gene3D G3DSA:3.40.190.10 176 268 2.0E-18 T 29-03-2018 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 Gene3D G3DSA:3.40.190.10 88 175 2.0E-18 T 29-03-2018 AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 Gene3D G3DSA:1.10.10.10 1 83 3.5E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03245 aa1b3b4c24cd8c9b9f4dcc2f7bdceb31 296 Pfam PF03466 LysR substrate binding domain 87 293 1.7E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 SMART SM00823 Phosphopantetheine attachment site 510 579 0.0012 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:3.40.50.720 615 975 5.0E-32 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 482 7.7E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Pfam PF00550 Phosphopantetheine attachment site 514 573 8.0E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 419 1.0E-110 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:3.40.50.980 153 298 7.0E-26 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:3.30.300.30 390 516 8.6E-37 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:1.10.1200.10 517 608 2.5E-17 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 SUPERFAMILY SSF51735 614 915 4.0E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 SUPERFAMILY SSF51735 944 963 4.0E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 ProSitePatterns PS00012 Phosphopantetheine attachment site. 534 549 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 SUPERFAMILY SSF47336 510 576 3.66E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Pfam PF00501 AMP-binding enzyme 10 395 9.1E-82 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 620 989 8.9E-120 T 29-03-2018 IPR010080 Thioester reductase-like domain AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Pfam PF07993 Male sterility protein 623 866 8.3E-50 T 29-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:2.30.38.10 299 387 1.0E-20 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 Gene3D G3DSA:3.40.50.980 2 152 7.2E-41 T 29-03-2018 AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS10265 f2037547a5d6450a304d59f36a1190a3 991 SUPERFAMILY SSF56801 6 522 1.7E-137 T 29-03-2018 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 311 1.4E-95 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 Pfam PF01479 S4 domain 18 63 5.3E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 Pfam PF00849 RNA pseudouridylate synthase 91 241 2.9E-32 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 SUPERFAMILY SSF55120 75 314 1.01E-80 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 SUPERFAMILY SSF55174 17 104 8.41E-8 T 29-03-2018 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 Gene3D G3DSA:3.30.2350.10 82 315 9.5E-70 T 29-03-2018 AM474_RS20630 062662fe265578eecb8a19550d55caa5 320 Gene3D G3DSA:3.10.290.10 2 75 4.8E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Gene3D G3DSA:2.40.340.10 331 402 1.2E-13 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Pfam PF03454 MoeA C-terminal region (domain IV) 335 400 4.6E-15 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 181 317 1.2E-31 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Gene3D G3DSA:2.170.190.11 66 146 1.3E-24 T 29-03-2018 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 SUPERFAMILY SSF53218 182 325 3.66E-41 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Pfam PF00994 Probable molybdopterin binding domain 186 319 2.0E-27 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 172 5.1E-43 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Gene3D G3DSA:3.90.105.10 32 65 2.3E-9 T 29-03-2018 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 SMART SM00852 185 321 1.8E-40 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 SUPERFAMILY SSF63867 330 402 1.44E-15 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 Gene3D G3DSA:3.40.980.10 155 328 1.0E-52 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04355 c77bafc47160d456fd325e2accd6881d 405 SUPERFAMILY SSF63882 8 181 2.09E-53 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS21185 3999e4332b6b541a8a6ca2e2d4a46ef1 209 SUPERFAMILY SSF53474 7 203 3.33E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS21185 3999e4332b6b541a8a6ca2e2d4a46ef1 209 Gene3D G3DSA:3.40.50.1820 3 207 4.7E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS21185 3999e4332b6b541a8a6ca2e2d4a46ef1 209 Pfam PF00975 Thioesterase domain 88 139 3.3E-8 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SUPERFAMILY SSF50341 614 746 5.36E-32 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:2.30.30.40 616 652 0.039 T 29-03-2018 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:2.30.30.40 694 746 2.3E-21 T 29-03-2018 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SUPERFAMILY SSF47384 368 428 5.89E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:2.40.50.180 653 693 1.2E-10 T 29-03-2018 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SMART SM00260 607 746 8.6E-43 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SMART SM01231 367 427 9.7E-19 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Pfam PF01584 CheW-like domain 621 748 2.2E-24 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:3.30.565.10 430 615 1.2E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 614 3.4E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SUPERFAMILY SSF55874 430 613 7.47E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:1.20.120.160 2 145 2.1E-35 T 29-03-2018 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 368 427 5.2E-14 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SUPERFAMILY SSF47226 6 128 3.14E-33 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:1.10.287.560 367 428 2.9E-17 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Gene3D G3DSA:1.20.120.160 155 229 0.21 T 29-03-2018 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SMART SM00073 6 103 3.0E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 Pfam PF01627 Hpt domain 8 100 8.3E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 SMART SM00387 472 615 1.0E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 612 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26410 7293b48fad338ebdffb05e305ae23b16 753 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 4.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10005 a76d12f706ba34771b23d8f560870f7f 297 Gene3D G3DSA:3.40.190.10 18 124 3.3E-12 T 29-03-2018 AM474_RS10005 a76d12f706ba34771b23d8f560870f7f 297 Gene3D G3DSA:3.40.190.10 131 251 7.9E-8 T 29-03-2018 AM474_RS10005 a76d12f706ba34771b23d8f560870f7f 297 SUPERFAMILY SSF53850 27 245 6.42E-35 T 29-03-2018 AM474_RS10005 a76d12f706ba34771b23d8f560870f7f 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 245 5.4E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 Gene3D G3DSA:3.30.860.10 1 91 1.7E-37 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.717 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 SUPERFAMILY SSF54570 3 84 1.11E-34 T 29-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 29-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 PIRSF PIRSF002144 1 91 2.7E-31 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-22 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-22 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-22 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 8.3E-44 T 29-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11150 2469a8e8ac64f8ae89c6400722106914 91 Pfam PF00203 Ribosomal protein S19 3 83 6.0E-35 T 29-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SUPERFAMILY SSF46894 416 485 2.28E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SMART SM00091 142 209 0.063 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SMART SM00091 267 336 0.033 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SMART SM00091 13 84 0.074 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Gene3D G3DSA:3.30.450.20 142 263 2.7E-20 T 29-03-2018 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 262 1.6E-13 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 386 1.1E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SMART SM00421 423 480 3.8E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Pfam PF13188 PAS domain 14 66 2.8E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SUPERFAMILY SSF55785 255 377 1.15E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Pfam PF00196 Bacterial regulatory proteins, luxR family 426 480 8.8E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Pfam PF13426 PAS domain 282 377 4.2E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Pfam PF13426 PAS domain 160 252 2.2E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SUPERFAMILY SSF55785 136 251 2.79E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 SUPERFAMILY SSF55785 10 135 4.54E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Gene3D G3DSA:3.30.450.20 2 141 7.8E-13 T 29-03-2018 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Gene3D G3DSA:3.30.450.20 264 389 1.7E-17 T 29-03-2018 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 Gene3D G3DSA:1.10.10.10 390 489 1.8E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 426 440 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 456 468 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS12020 07cde4877a699f46a99863ca4d337ce4 496 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 440 456 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24975 c476ea054784f8f340c4a91d07ed6c80 177 Pfam PF00877 NlpC/P60 family 56 164 7.1E-30 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM474_RS24975 c476ea054784f8f340c4a91d07ed6c80 177 Gene3D G3DSA:3.90.1720.10 20 89 1.8E-15 T 29-03-2018 AM474_RS24975 c476ea054784f8f340c4a91d07ed6c80 177 SUPERFAMILY SSF54001 36 167 3.09E-40 T 29-03-2018 AM474_RS24975 c476ea054784f8f340c4a91d07ed6c80 177 Gene3D G3DSA:2.30.260.10 90 170 8.8E-21 T 29-03-2018 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 Pfam PF00593 TonB dependent receptor 317 793 2.6E-69 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 SMART SM00965 56 107 1.4E-10 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 Gene3D G3DSA:2.40.170.20 263 795 9.2E-86 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 146 795 7.3E-110 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 Pfam PF07660 Secretin and TonB N terminus short domain 58 106 1.7E-7 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 778 795 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS14020 acc001970b8c13865146d1aac715343a 795 SUPERFAMILY SSF56935 112 795 1.11E-125 T 29-03-2018 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 Gene3D G3DSA:2.170.130.10 107 249 2.4E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS14020 acc001970b8c13865146d1aac715343a 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 242 3.4E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 6 331 41.841 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 Gene3D G3DSA:3.20.20.70 2 331 3.5E-77 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF13353 4Fe-4S single cluster domain 22 121 1.1E-6 T 29-03-2018 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 SUPERFAMILY SSF102114 6 278 8.89E-77 T 29-03-2018 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 314 3.3E-38 T 29-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 SMART SM00729 15 219 2.2E-14 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 331 8.4E-113 T 29-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 AM474_RS26645 34f83a557d7d0969bf4aff943ae18b7b 331 Pfam PF04055 Radical SAM superfamily 20 179 2.0E-30 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 Gene3D G3DSA:3.40.605.10 1 263 5.6E-86 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 SUPERFAMILY SSF53720 3 483 2.09E-145 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 2.8E-279 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 Gene3D G3DSA:3.40.309.10 264 459 6.8E-59 T 29-03-2018 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 Pfam PF00171 Aldehyde dehydrogenase family 18 477 1.2E-136 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS07185 ab33f6b8e41196b5c02fbc8a9be7f9cc 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS20485 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 108 2.9E-24 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS20485 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:1.10.287.460 1 89 7.9E-22 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS20485 e8aa95870f619f79f1c83e5da5a3e681 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 202 3.6E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS20485 e8aa95870f619f79f1c83e5da5a3e681 205 SUPERFAMILY SSF54534 7 204 2.95E-55 T 29-03-2018 AM474_RS20485 e8aa95870f619f79f1c83e5da5a3e681 205 Gene3D G3DSA:3.10.50.40 90 205 6.1E-39 T 29-03-2018 AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 Pfam PF04461 Protein of unknown function (DUF520) 2 158 6.1E-62 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 Gene3D G3DSA:3.30.70.860 94 158 1.3E-33 T 29-03-2018 IPR035571 UPF0234/UPF0381 domain AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 Gene3D G3DSA:3.30.70.990 10 93 1.2E-26 T 29-03-2018 IPR035570 UPF0234 N-terminal domain AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 159 29.102 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 SUPERFAMILY SSF89963 87 159 2.88E-29 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM474_RS21420 ec864d2cddacf415b9ab2ccb09b9df15 159 SUPERFAMILY SSF89963 2 85 2.43E-26 T 29-03-2018 IPR007551 Protein of unknown function DUF520 AM474_RS21985 f32c4994125703e8730af875ff65003c 227 Gene3D G3DSA:3.30.930.10 3 210 3.0E-28 T 29-03-2018 AM474_RS21985 f32c4994125703e8730af875ff65003c 227 SUPERFAMILY SSF55681 6 214 3.23E-45 T 29-03-2018 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 SMART SM00304 192 244 6.2E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 PIRSF PIRSF003167 17 622 5.0E-198 T 29-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF07730 Histidine kinase 411 477 1.8E-17 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:1.10.287.1060 221 261 0.31 T 29-03-2018 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 518 607 5.5E-8 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 SMART SM00387 517 611 1.8E-9 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF00672 HAMP domain 194 240 7.9E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:3.30.450.40 262 429 2.2E-6 T 29-03-2018 IPR029016 GAF domain-like AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 SUPERFAMILY SSF55874 512 608 8.77E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 62 85 8.9E-7 T 29-03-2018 IPR029095 NarX-like, N-terminal AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 Gene3D G3DSA:3.30.565.10 476 612 8.5E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09105 3b78ded687cb2eaa05610b9710f2a65f 622 SUPERFAMILY SSF158472 193 242 1.06E-9 T 29-03-2018 AM474_RS11860 f43ca2954e415b463fda48c735d09799 112 Gene3D G3DSA:1.20.1290.10 2 112 2.0E-25 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS11860 f43ca2954e415b463fda48c735d09799 112 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 90 1.5E-19 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS11860 f43ca2954e415b463fda48c735d09799 112 SUPERFAMILY SSF69118 5 111 1.13E-29 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS11860 f43ca2954e415b463fda48c735d09799 112 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 106 1.4E-19 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 Gene3D G3DSA:1.10.150.120 75 153 1.7E-27 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 Pfam PF01799 [2Fe-2S] binding domain 73 144 3.4E-25 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 SUPERFAMILY SSF54292 2 78 7.73E-26 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 59 8.2E-9 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 Gene3D G3DSA:3.10.20.30 2 74 4.0E-27 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS28705 cbdc9525062c8b38e77ce3e8eac6d09e 153 SUPERFAMILY SSF47741 73 151 4.58E-30 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS17305 ba2c5a327ddfcf82a4df8efd0cb34957 464 Pfam PF13163 Protein of unknown function (DUF3999) 31 456 3.0E-149 T 29-03-2018 IPR025060 Protein of unknown function DUF3999 AM474_RS17305 ba2c5a327ddfcf82a4df8efd0cb34957 464 Gene3D G3DSA:2.60.120.260 41 234 5.9E-6 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Gene3D G3DSA:1.20.120.30 24 185 1.1E-7 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 SMART SM00283 273 541 2.4E-46 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 SUPERFAMILY SSF58104 233 542 1.83E-61 T 29-03-2018 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 17 1.8E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.8E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.8E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.8E-18 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Gene3D G3DSA:1.10.287.950 326 542 2.8E-47 T 29-03-2018 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Pfam PF00672 HAMP domain 213 261 1.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 SMART SM00304 213 265 1.4E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Gene3D G3DSA:1.10.287.1060 248 325 0.033 T 29-03-2018 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 505 4.8E-34 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS07900 7dca4e5129c079bd816bb789e60e605a 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 182 2.9E-20 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AM474_RS12045 2899dae332d8d2ade01ccf120dd99963 233 SUPERFAMILY SSF50800 4 225 1.62E-77 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS12045 2899dae332d8d2ade01ccf120dd99963 233 Gene3D G3DSA:2.40.33.20 1 233 5.6E-54 T 29-03-2018 AM474_RS12045 2899dae332d8d2ade01ccf120dd99963 233 Pfam PF03473 MOSC domain 49 160 2.5E-21 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM474_RS12045 2899dae332d8d2ade01ccf120dd99963 233 Pfam PF03475 3-alpha domain 171 213 3.5E-15 T 29-03-2018 IPR005163 3-alpha domain AM474_RS09045 eea8eb6d2c72abdae83b6568829e8696 210 Pfam PF08348 YheO-like PAS domain 9 114 3.8E-27 T 29-03-2018 IPR013559 YheO-like AM474_RS09045 eea8eb6d2c72abdae83b6568829e8696 210 Pfam PF13309 HTH domain 142 203 1.9E-16 T 29-03-2018 AM474_RS09045 eea8eb6d2c72abdae83b6568829e8696 210 Gene3D G3DSA:1.10.10.60 160 210 7.0E-5 T 29-03-2018 AM474_RS09045 eea8eb6d2c72abdae83b6568829e8696 210 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 110 7.0E-54 T 29-03-2018 IPR013559 YheO-like AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 29-03-2018 AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 SUPERFAMILY SSF57840 1 38 2.75E-17 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 6.0E-22 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 Pfam PF00444 Ribosomal protein L36 1 38 6.1E-21 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11065 fe6b616d3fd6ca324a32be2c6f1e9388 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.137 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS14025 75ca3f7d4302173360de1c41bdf3dc9c 331 Pfam PF16220 Domain of unknown function (DUF4880) 18 58 9.6E-12 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS14025 75ca3f7d4302173360de1c41bdf3dc9c 331 Pfam PF16344 Domain of unknown function (DUF4974) 245 315 3.7E-9 T 29-03-2018 IPR032508 Protein FecR, C-terminal AM474_RS14025 75ca3f7d4302173360de1c41bdf3dc9c 331 Pfam PF04773 FecR protein 125 215 2.5E-18 T 29-03-2018 IPR006860 FecR protein AM474_RS14025 75ca3f7d4302173360de1c41bdf3dc9c 331 PIRSF PIRSF018266 6 331 1.8E-86 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 SUPERFAMILY SSF111369 198 295 1.7E-11 T 29-03-2018 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 SUPERFAMILY SSF111369 128 189 2.09E-5 T 29-03-2018 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 350 1.7E-8 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 355 2.2E-9 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 2.2E-9 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 Gene3D G3DSA:1.10.287.470 126 188 4.2E-7 T 29-03-2018 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 Gene3D G3DSA:2.40.50.100 57 125 4.7E-14 T 29-03-2018 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 Gene3D G3DSA:1.20.1600.10 189 318 7.9E-20 T 29-03-2018 AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 297 1.9E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS04935 d89254e158d3519d8983814b088c72e3 355 SUPERFAMILY SSF111369 56 115 7.19E-7 T 29-03-2018 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.0E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 84 193 5.1E-35 T 29-03-2018 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 110.913 T 29-03-2018 IPR017757 Transcriptional repressor BetI AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF46689 5 79 1.08E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.5E-77 T 29-03-2018 IPR017757 Transcriptional repressor BetI AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 SUPERFAMILY SSF48498 81 193 9.24E-24 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Gene3D G3DSA:1.10.10.60 6 44 1.8E-10 T 29-03-2018 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Gene3D G3DSA:1.10.260.40 45 67 1.4E-7 T 29-03-2018 AM474_RS15910 894a4a8ebdea7199ed932a840f262df8 197 Gene3D G3DSA:1.10.357.10 68 197 1.0E-17 T 29-03-2018 AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 Gene3D G3DSA:2.60.120.330 1 314 4.0E-106 T 29-03-2018 IPR027443 Isopenicillin N synthase-like AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 4 128 4.5E-32 T 29-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 174 274 7.1E-25 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 PRINTS PR00682 Isopenicillin N synthase signature 149 165 6.2E-14 T 29-03-2018 AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 PRINTS PR00682 Isopenicillin N synthase signature 234 260 6.2E-14 T 29-03-2018 AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 PRINTS PR00682 Isopenicillin N synthase signature 27 44 6.2E-14 T 29-03-2018 AM474_RS14040 39d85ea12d7c1fba338dd0cf3a385fbf 320 SUPERFAMILY SSF51197 3 314 1.3E-101 T 29-03-2018 AM474_RS10850 b28aa0e3a7af7c87517f0588d58b7ec4 288 SUPERFAMILY SSF56281 3 270 9.96E-41 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS10850 b28aa0e3a7af7c87517f0588d58b7ec4 288 SMART SM00849 43 257 1.8E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS10850 b28aa0e3a7af7c87517f0588d58b7ec4 288 Gene3D G3DSA:3.60.15.10 2 269 1.9E-40 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS10850 b28aa0e3a7af7c87517f0588d58b7ec4 288 Pfam PF00753 Metallo-beta-lactamase superfamily 42 257 5.9E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 5.2E-45 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 SUPERFAMILY SSF52218 4 196 3.01E-64 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 Gene3D G3DSA:3.40.50.360 2 198 5.0E-42 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 29-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 Pfam PF03358 NADPH-dependent FMN reductase 13 141 4.0E-9 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS23465 092226fc64ef7a8cca956cdc3c0b9d4a 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 3 198 32.831 T 29-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 SMART SM00864 13 205 1.9E-113 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 366 37.72 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.1E-40 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 Pfam PF12327 FtsZ family, C-terminal domain 222 316 7.1E-36 T 29-03-2018 IPR024757 Cell division protein FtsZ, C-terminal AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 Gene3D G3DSA:3.30.1330.20 215 325 2.6E-43 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 29-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 SMART SM00865 207 325 3.0E-57 T 29-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 SUPERFAMILY SSF55307 204 319 3.89E-42 T 29-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 2.6E-127 T 29-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 Gene3D G3DSA:3.40.50.1440 8 214 8.5E-42 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 SUPERFAMILY SSF52490 13 208 5.89E-69 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 98 118 3.9E-51 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 189 211 3.9E-51 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 212 233 3.9E-51 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS21355 2d87df409f24d2eedbde679c72d3b50c 394 PRINTS PR00423 Cell division protein FtsZ signature 126 147 3.9E-51 T 29-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM474_RS08840 ebc76ec3f1407df3d6dc98999b2ef828 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 5.8E-130 T 29-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AM474_RS08840 ebc76ec3f1407df3d6dc98999b2ef828 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 2.0E-66 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM474_RS12675 76846cdad2ec6cdf4c1881cccd419ecd 319 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 233 310 3.3E-16 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS12675 76846cdad2ec6cdf4c1881cccd419ecd 319 Gene3D G3DSA:3.30.1150.10 14 318 1.3E-21 T 29-03-2018 AM474_RS12675 76846cdad2ec6cdf4c1881cccd419ecd 319 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 235 311 2.9E-14 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS12675 76846cdad2ec6cdf4c1881cccd419ecd 319 SUPERFAMILY SSF74653 129 136 7.59E-19 T 29-03-2018 AM474_RS12675 76846cdad2ec6cdf4c1881cccd419ecd 319 SUPERFAMILY SSF74653 207 314 7.59E-19 T 29-03-2018 AM474_RS24000 ff149cfed8666ae81f92c132c06fc153 428 Gene3D G3DSA:3.40.50.720 29 101 4.0E-4 T 29-03-2018 AM474_RS24000 ff149cfed8666ae81f92c132c06fc153 428 Pfam PF01266 FAD dependent oxidoreductase 30 381 2.8E-50 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS24000 ff149cfed8666ae81f92c132c06fc153 428 SUPERFAMILY SSF51905 345 403 7.77E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS24000 ff149cfed8666ae81f92c132c06fc153 428 SUPERFAMILY SSF51905 29 253 7.77E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS24000 ff149cfed8666ae81f92c132c06fc153 428 Gene3D G3DSA:3.30.9.10 102 345 1.9E-27 T 29-03-2018 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 PRINTS PR00116 Arginase signature 122 137 5.9E-11 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 PRINTS PR00116 Arginase signature 235 264 5.9E-11 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 PIRSF PIRSF036979 14 314 1.4E-91 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 SUPERFAMILY SSF52768 15 311 4.32E-95 T 29-03-2018 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 TIGRFAM TIGR01230 agmatinase: agmatinase 39 308 3.2E-54 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 Pfam PF00491 Arginase family 36 307 1.3E-86 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS13310 1a7f4cef68e8ae96bbce38e82797c3e5 318 Gene3D G3DSA:3.40.800.10 3 318 7.2E-96 T 29-03-2018 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 294 1.5E-10 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 Gene3D G3DSA:1.10.287.470 121 168 1.5E-8 T 29-03-2018 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 Gene3D G3DSA:2.40.50.100 169 342 4.5E-4 T 29-03-2018 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 375 1.1E-71 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 360 4.9E-12 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 SUPERFAMILY SSF111369 53 300 4.71E-72 T 29-03-2018 AM474_RS29415 1585cde376710b184e5f649f1986c7b0 396 Gene3D G3DSA:2.40.50.100 64 120 8.5E-17 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 Gene3D G3DSA:1.20.200.10 139 394 4.4E-63 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 Pfam PF00206 Lyase 54 327 4.2E-42 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 SUPERFAMILY SSF48557 43 480 1.16E-104 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 Gene3D G3DSA:1.10.40.30 397 476 2.8E-15 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 SMART SM00998 397 476 3.2E-16 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.5E-9 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 264 288 1.5E-9 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00145 Argininosuccinate lyase family signature 309 325 1.5E-9 T 29-03-2018 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.6E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 9.6E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 309 325 9.6E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 PRINTS PR00149 Fumarate lyase superfamily signature 264 291 9.6E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 ProSitePatterns PS00163 Fumarate lyases signature. 309 318 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 Gene3D G3DSA:1.10.275.10 36 138 6.6E-19 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS06905 28d33c86214d5ede5d095db1edf01a97 483 Pfam PF10397 Adenylosuccinate lyase C-terminus 400 475 8.6E-12 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS27840 dae241171a5a7fa9630e2e634bc0f973 206 Pfam PF06578 YOP proteins translocation protein K (YscK) 3 206 2.7E-91 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AM474_RS27840 dae241171a5a7fa9630e2e634bc0f973 206 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 1 206 1.0E-99 T 29-03-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 SMART SM01230 117 373 1.6E-98 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 Gene3D G3DSA:3.30.590.10 118 455 1.4E-95 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF55931 118 453 9.32E-104 T 29-03-2018 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 Gene3D G3DSA:3.10.20.70 6 117 5.7E-12 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 Pfam PF00120 Glutamine synthetase, catalytic domain 118 451 4.8E-106 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15135 f42edf6f36caa10457da5957967c1d82 455 SUPERFAMILY SSF54368 9 111 5.36E-8 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS32115 90ea7d7354fba15cc581da3293765bad 414 SUPERFAMILY SSF111369 53 294 9.94E-71 T 29-03-2018 AM474_RS32115 90ea7d7354fba15cc581da3293765bad 414 Gene3D G3DSA:2.40.50.100 63 135 1.6E-17 T 29-03-2018 AM474_RS32115 90ea7d7354fba15cc581da3293765bad 414 Gene3D G3DSA:2.40.50.100 163 389 2.1E-7 T 29-03-2018 AM474_RS32115 90ea7d7354fba15cc581da3293765bad 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 290 6.3E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS32115 90ea7d7354fba15cc581da3293765bad 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 371 1.6E-80 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 SUPERFAMILY SSF47203 241 396 7.09E-37 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 1.9E-23 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 SUPERFAMILY SSF56645 8 254 4.19E-47 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 394 1.8E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:2.40.110.10 133 225 2.4E-35 T 29-03-2018 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:1.10.540.10 1 132 7.4E-18 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18200 0444daf4aac4ef3849dc366fcd077a47 402 Gene3D G3DSA:1.20.140.10 226 402 5.4E-43 T 29-03-2018 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PIRSF PIRSF000114 1 332 1.3E-107 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 SUPERFAMILY SSF51735 7 178 2.68E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 Gene3D G3DSA:1.10.1040.10 180 330 2.2E-48 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 2.0E-38 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 5.9E-47 T 29-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 SUPERFAMILY SSF48179 180 331 1.55E-49 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 160 1.7E-51 T 29-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 322 35.396 T 29-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 AM474_RS27245 993aa2abe409f7aef59cddf87f9e3efd 340 Gene3D G3DSA:3.40.50.720 1 179 6.1E-40 T 29-03-2018 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 450 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.1E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SMART SM00073 5 102 5.6E-30 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 495 2.2E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Gene3D G3DSA:1.10.287.560 248 310 3.5E-21 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SUPERFAMILY SSF50341 495 628 1.57E-30 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SUPERFAMILY SSF47384 250 312 1.26E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Gene3D G3DSA:3.30.565.10 311 497 1.0E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SUPERFAMILY SSF47226 4 127 9.03E-34 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Gene3D G3DSA:1.20.120.160 1 138 1.1E-35 T 29-03-2018 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SUPERFAMILY SSF55874 313 494 4.32E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 250 311 5.4E-18 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SMART SM00387 356 496 5.4E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SMART SM00260 488 629 4.6E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Gene3D G3DSA:2.30.30.40 583 628 8.4E-23 T 29-03-2018 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Pfam PF01627 Hpt domain 7 105 9.5E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Pfam PF01584 CheW-like domain 501 628 2.1E-26 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 Gene3D G3DSA:2.40.50.180 508 582 4.7E-13 T 29-03-2018 AM474_RS13880 0ca2fd8e0478808578ac091011780954 642 SMART SM01231 248 311 1.5E-23 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF00158 Sigma-54 interaction domain 208 374 1.7E-58 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:1.10.10.60 462 515 0.0016 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF01842 ACT domain 3 64 1.9E-8 T 29-03-2018 IPR002912 ACT domain AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.30.70.260 1 80 2.1E-9 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:1.10.8.60 383 452 1.4E-21 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SMART SM00382 227 372 1.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF55785 84 142 3.66E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SMART SM00091 82 148 9.6E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF46689 459 514 1.48E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 469 515 1.7E-21 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.30.450.20 81 210 5.0E-10 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Gene3D G3DSA:3.40.50.300 211 380 8.4E-19 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF55021 2 72 2.33E-9 T 29-03-2018 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 Pfam PF00989 PAS fold 83 140 1.5E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS23035 d8778b5dafb59de1d5bcca8931238f78 519 SUPERFAMILY SSF52540 207 449 4.9E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 SUPERFAMILY SSF52540 343 382 1.06E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 SUPERFAMILY SSF52540 521 678 1.06E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 SUPERFAMILY SSF52540 411 442 1.06E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 Pfam PF13604 AAA domain 213 380 1.2E-29 T 29-03-2018 AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 Gene3D G3DSA:3.40.50.300 164 419 1.2E-54 T 29-03-2018 AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 Gene3D G3DSA:3.40.50.300 429 690 1.2E-28 T 29-03-2018 AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 Pfam PF13538 UvrD-like helicase C-terminal domain 629 676 8.2E-15 T 29-03-2018 IPR027785 UvrD-like helicase C-terminal domain AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 SUPERFAMILY SSF52540 37 424 1.66E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 43 699 49.012 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM474_RS22000 8cdf57621a8fc4138c9e8ea516a93e40 721 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 35 701 2.1E-221 T 29-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF47384 194 277 1.82E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00388 211 277 6.7E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:1.10.287.130 201 273 4.2E-13 T 29-03-2018 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00304 156 210 5.6E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 SMART SM00387 321 426 3.7E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 SUPERFAMILY SSF55874 287 423 6.29E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 424 3.9E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 276 1.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 Gene3D G3DSA:3.30.565.10 284 426 7.5E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21500 6c32b9043b2e1e4c1a075890708d68fe 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 2.0E-183 T 29-03-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 5.3E-30 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 5.3E-30 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.3E-30 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-30 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 5.3E-30 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Gene3D G3DSA:3.50.50.60 270 327 2.4E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Gene3D G3DSA:3.50.50.60 2 148 1.3E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 3.7E-70 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Gene3D G3DSA:3.30.390.30 331 449 6.7E-39 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 1.9E-35 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 Gene3D G3DSA:3.50.50.60 149 269 9.6E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 SUPERFAMILY SSF51905 1 358 1.69E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.8E-68 T 29-03-2018 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 SUPERFAMILY SSF55424 335 447 3.95E-36 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS29445 2cc4ece21978836d7f12f27fe7066dc2 451 PIRSF PIRSF000350 1 444 8.5E-88 T 29-03-2018 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 SUPERFAMILY SSF47203 233 385 6.28E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:1.10.540.10 1 125 1.1E-41 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:2.40.110.10 126 223 2.9E-41 T 29-03-2018 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 1.0E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 PIRSF PIRSF016578 12 387 9.5E-15 T 29-03-2018 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.9E-41 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 SUPERFAMILY SSF56645 5 247 5.1E-87 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 5.9E-28 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS29390 3afe3ea853be6511fb1508cbefc0cee3 387 Gene3D G3DSA:1.20.140.10 224 387 2.7E-55 T 29-03-2018 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Pfam PF00072 Response regulator receiver domain 5 109 6.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Gene3D G3DSA:3.40.50.2300 2 150 3.4E-29 T 29-03-2018 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Gene3D G3DSA:3.40.50.180 175 368 8.4E-72 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 368 39.478 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 Pfam PF01339 CheB methylesterase 187 363 3.4E-57 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SMART SM00448 3 122 2.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 PIRSF PIRSF000876 1 368 7.9E-131 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SUPERFAMILY SSF52172 3 109 3.27E-28 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS26415 4bb6b6401d6dd9bbf5c8f65ce0ac4cf9 368 SUPERFAMILY SSF52738 182 367 4.32E-64 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS28775 e69c2ce70e91580a7f9354d087cf9e66 424 Pfam PF00487 Fatty acid desaturase 86 357 1.4E-7 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 SMART SM00354 11 82 3.2E-25 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:3.40.50.2300 67 172 1.2E-29 T 29-03-2018 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 SUPERFAMILY SSF47413 11 70 9.38E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:1.10.10.60 5 24 8.7E-4 T 29-03-2018 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 72 331 3.4E-22 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:1.10.260.40 25 66 5.6E-20 T 29-03-2018 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Gene3D G3DSA:3.40.50.2300 173 339 3.1E-28 T 29-03-2018 AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 SUPERFAMILY SSF53822 69 330 1.51E-60 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS30910 76b762b7a45b3fcbfdb237512814f9a9 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 1.1E-12 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS20300 9f980f1efc36de66b5490c66a7dfd718 168 Pfam PF11220 Protein of unknown function (DUF3015) 24 163 3.7E-54 T 29-03-2018 IPR021383 Protein of unknown function DUF3015 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1380 1395 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:2.30.38.10 863 940 1.9E-23 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Pfam PF00668 Condensation domain 137 439 4.9E-28 T 29-03-2018 IPR001242 Condensation domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:3.30.300.30 945 1359 1.7E-25 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF56801 1286 1333 1.17E-116 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF56801 543 991 1.17E-116 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Pfam PF00550 Phosphopantetheine attachment site 13 80 1.7E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Pfam PF00550 Phosphopantetheine attachment site 1358 1421 5.8E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF47336 1349 1421 6.28E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF52777 285 526 2.0E-40 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:3.30.559.10 101 290 8.5E-18 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:3.40.50.980 551 699 6.6E-37 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Pfam PF00501 AMP-binding enzyme 563 950 2.3E-83 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SMART SM00823 Phosphopantetheine attachment site 1356 1425 2.3E-12 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:1.10.1200.10 1360 1434 1.4E-19 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF52777 100 295 1.02E-20 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 583 973 2.0E-110 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:1.10.1200.10 5 100 3.0E-9 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF53335 1109 1268 1.35E-9 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 SUPERFAMILY SSF47336 6 117 9.95E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 Gene3D G3DSA:3.40.50.980 700 856 1.1E-32 T 29-03-2018 AM474_RS10985 0cd79e5ce612ab879b5be317e34261a5 1438 ProSitePatterns PS00455 Putative AMP-binding domain signature. 694 705 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 497 5.7E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 SUPERFAMILY SSF58104 230 530 2.88E-70 T 29-03-2018 AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 Gene3D G3DSA:1.10.287.950 298 502 1.3E-50 T 29-03-2018 AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 SMART SM00283 266 530 1.9E-70 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 Gene3D G3DSA:1.10.287.950 56 297 5.5E-4 T 29-03-2018 AM474_RS02200 1b47e67320eb9a62fb098549bf2f5f21 531 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 52 142 2.1E-15 T 29-03-2018 IPR029095 NarX-like, N-terminal AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 SUPERFAMILY SSF63380 5 103 2.6E-23 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 Pfam PF00175 Oxidoreductase NAD-binding domain 116 170 1.6E-5 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 Gene3D G3DSA:3.40.50.80 107 215 5.3E-18 T 29-03-2018 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 SUPERFAMILY SSF54292 213 316 2.62E-24 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 SUPERFAMILY SSF52343 101 224 4.19E-25 T 29-03-2018 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 93 107 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 79 93 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 33 43 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 43 55 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 140 149 3.4E-40 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 246 311 3.9E-10 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 Gene3D G3DSA:3.10.20.30 216 321 6.7E-21 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS10345 eef92fe434742f2448944fac39bdb0c1 321 Gene3D G3DSA:2.40.30.10 7 106 5.3E-13 T 29-03-2018 AM474_RS03130 3d0441be4c599ea79344bccfd8fc82a5 152 Pfam PF11663 Toxin with endonuclease activity, of toxin-antitoxin system 8 144 1.1E-58 T 29-03-2018 IPR021679 Toxin endonuclease, YhaV GO:0004540|GO:0110001 AM474_RS03130 3d0441be4c599ea79344bccfd8fc82a5 152 Gene3D G3DSA:3.30.2310.20 5 111 2.5E-4 T 29-03-2018 AM474_RS17210 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Gene3D G3DSA:3.40.250.10 29 139 1.4E-22 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS17210 50f19f1d45ff6f34da6e2ba3ca9318b7 139 Pfam PF00581 Rhodanese-like domain 43 131 4.8E-11 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS17210 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SMART SM00450 40 136 5.7E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS17210 50f19f1d45ff6f34da6e2ba3ca9318b7 139 SUPERFAMILY SSF52821 16 139 3.27E-29 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 321 1.1E-108 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 SUPERFAMILY SSF50715 341 552 4.6E-69 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:2.40.240.10 345 463 5.8E-44 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:2.40.240.10 464 551 3.3E-31 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 57 2.7E-8 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 2.7E-8 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 2.7E-8 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 221 2.7E-8 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 SUPERFAMILY SSF52374 28 347 8.16E-98 T 29-03-2018 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:3.40.50.620 20 42 0.04 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 30 553 5.2E-229 T 29-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 54.019 T 29-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:3.40.50.620 43 153 3.7E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:3.40.50.620 156 261 1.8E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 341 532 7.0E-58 T 29-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS28215 6b37727e2fd43fca14b0acfe3a2152bd 556 Gene3D G3DSA:1.10.1160.10 262 339 2.5E-33 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 362 521 5.6E-28 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.90.1170.50 33 175 2.9E-6 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF54665 52 174 4.53E-12 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 540 736 7.5E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 261 361 9.7E-13 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Gene3D G3DSA:3.30.365.10 766 943 1.8E-37 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 690 881 1.9E-16 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 265 602 1.3E-52 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF56003 797 942 1.7E-122 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF56003 638 742 1.7E-122 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS20220 7688a0d518492d1bf99a8c62a4afefa8 943 SUPERFAMILY SSF56003 264 610 1.7E-122 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00448 958 1074 2.9E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 877 1.7E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 915 1.7E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 881 891 1.7E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 934 1.7E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF00072 Response regulator receiver domain 960 1074 3.1E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF00512 His Kinase A (phospho-acceptor) domain 709 775 1.9E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:1.10.287.130 707 769 9.3E-15 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.40.190.10 440 517 2.5E-4 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00062 298 520 8.0E-26 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00062 56 275 9.7E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 577 692 1.7E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF53850 292 519 7.5E-39 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.40.50.2300 951 1097 4.7E-35 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF08448 PAS fold 583 690 8.3E-13 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF55874 765 935 6.94E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 300 516 6.9E-31 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 273 1.1E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00388 709 775 8.3E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.40.190.10 163 282 2.9E-8 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.40.190.10 287 439 1.0E-22 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF53850 48 274 2.55E-32 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 823 935 2.4E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.40.190.10 51 162 8.3E-15 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:1.20.120.160 1098 1209 1.7E-14 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF47384 692 776 1.43E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF55785 559 687 4.19E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF47226 1100 1182 5.23E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF47226 1057 1070 5.23E-18 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SUPERFAMILY SSF52172 956 1076 1.57E-33 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.30.450.20 552 706 2.4E-23 T 29-03-2018 AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00091 574 642 0.001 T 29-03-2018 IPR000014 PAS domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Gene3D G3DSA:3.30.565.10 770 937 1.1E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 SMART SM00387 822 937 1.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09485 3aeefb056b88148810a2e092670bbf88 1212 Pfam PF01627 Hpt domain 1121 1178 9.6E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 261 2.2E-64 T 29-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 SUPERFAMILY SSF53335 7 264 1.66E-79 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 57.968 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 SMART SM00650 23 195 9.5E-88 T 29-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 261 1.9E-83 T 29-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 29-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 Gene3D G3DSA:3.40.50.150 3 210 5.8E-58 T 29-03-2018 AM474_RS11665 ff9411d2015c987aa61da5ecbe28a093 268 Gene3D G3DSA:1.10.8.100 211 265 4.0E-24 T 29-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 SUPERFAMILY SSF51735 9 250 7.04E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 193 0.0028 T 29-03-2018 AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 Gene3D G3DSA:3.40.50.720 2 252 4.1E-68 T 29-03-2018 AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 249 6.5E-56 T 29-03-2018 AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28415 a06b56523ac4bc7db67ca88ae0ae34fe 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF143968 323 487 2.35E-66 T 29-03-2018 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.3E-171 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:1.20.5.570 460 487 2.3E-17 T 29-03-2018 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.005 T 29-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.6E-174 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 Gene3D G3DSA:3.40.1670.10 323 459 8.8E-52 T 29-03-2018 AM474_RS16640 7ec53ed78a1dce8ffd9bff4e4e3ede01 488 SUPERFAMILY SSF50475 3 322 3.92E-126 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 Pfam PF03466 LysR substrate binding domain 198 318 5.6E-7 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 SUPERFAMILY SSF53850 116 322 2.17E-10 T 29-03-2018 AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 Gene3D G3DSA:1.10.10.10 31 112 1.4E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 SUPERFAMILY SSF46785 33 112 1.02E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 Gene3D G3DSA:3.40.190.10 176 292 5.9E-4 T 29-03-2018 AM474_RS22195 2935b3e08f471952db1f86808e6ba0ec 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 36 92 1.5E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 421 3.6E-239 T 29-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 29-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PIRSF PIRSF001369 37 428 3.2E-180 T 29-03-2018 IPR024176 Citrate synthase, bacterial-type AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 379 393 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 165 178 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 219 234 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 241 269 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 296 316 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 PRINTS PR00143 Citrate synthase signature 359 375 7.9E-57 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 SUPERFAMILY SSF48256 6 427 1.2E-169 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 Gene3D G3DSA:1.10.580.10 53 302 2.5E-93 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 5.7E-134 T 29-03-2018 IPR002020 Citrate synthase GO:0046912 AM474_RS27075 cddfba8b610a74cedb3261827fc15db7 428 Gene3D G3DSA:1.10.580.10 329 402 5.2E-9 T 29-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:3.40.50.300 345 606 2.4E-73 T 29-03-2018 AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF90123 31 343 2.88E-48 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 SUPERFAMILY SSF52540 351 602 2.66E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 SMART SM00382 387 578 1.1E-22 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 Gene3D G3DSA:1.20.1560.10 16 340 2.9E-33 T 29-03-2018 AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00005 ABC transporter 379 532 2.0E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS05420 e41367e78ff8b1824c3bc3c5685d958c 610 Pfam PF00664 ABC transporter transmembrane region 42 301 1.2E-14 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 199 362 3.4E-50 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Gene3D G3DSA:3.10.20.30 1 86 1.1E-26 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Gene3D G3DSA:1.10.150.120 87 194 7.5E-36 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 SUPERFAMILY SSF56176 184 361 9.0E-53 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Gene3D G3DSA:3.30.465.10 250 363 1.7E-28 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 76 6.0E-6 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Pfam PF01799 [2Fe-2S] binding domain 86 158 8.5E-30 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 SMART SM01092 370 471 3.7E-33 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 SUPERFAMILY SSF54292 3 90 1.97E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Gene3D G3DSA:3.30.43.10 195 249 7.9E-16 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 470 4.4E-211 T 29-03-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 SUPERFAMILY SSF47741 97 201 1.57E-33 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Gene3D G3DSA:3.30.390.50 364 474 1.1E-29 T 29-03-2018 AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 PIRSF PIRSF036557 1 484 3.0E-227 T 29-03-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 SUPERFAMILY SSF55447 368 473 1.07E-32 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS26745 bc5fdb3a3fdaaa1e1f77881f7d5dc643 484 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 370 470 2.2E-30 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 Gene3D G3DSA:1.10.510.10 129 241 2.5E-7 T 29-03-2018 AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 29-03-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 SMART SM00090 2 234 5.3E-16 T 29-03-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 Pfam PF01163 RIO1 family 31 222 1.2E-47 T 29-03-2018 AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 SUPERFAMILY SSF56112 18 225 1.89E-22 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS19325 e0d7548342e35f66af28392732cf54ff 297 Gene3D G3DSA:3.30.200.20 16 125 4.7E-24 T 29-03-2018 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 660 764 6.9E-21 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 559 655 7.7E-28 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Gene3D G3DSA:3.40.120.10 555 662 8.0E-36 T 29-03-2018 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 775 852 2.6E-13 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 SUPERFAMILY SSF53738 412 552 5.49E-39 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Gene3D G3DSA:3.30.450.20 74 205 9.8E-4 T 29-03-2018 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Gene3D G3DSA:3.30.310.50 771 863 7.2E-19 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Gene3D G3DSA:3.40.120.10 663 770 2.7E-25 T 29-03-2018 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 SUPERFAMILY SSF53738 556 657 9.81E-33 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 502 511 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 413 542 1.3E-36 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 572 591 1.0E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 606 619 1.0E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 501 515 1.0E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 635 650 1.0E-24 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 SUPERFAMILY SSF55957 770 861 9.07E-26 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 Gene3D G3DSA:3.40.120.10 401 554 7.9E-38 T 29-03-2018 AM474_RS16200 c771a81ef16efd4ae92d6b52d44400b6 863 SUPERFAMILY SSF53738 660 763 8.63E-33 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 Gene3D G3DSA:1.10.10.10 3 84 4.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 SUPERFAMILY SSF53850 89 291 5.07E-49 T 29-03-2018 AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 Gene3D G3DSA:3.40.190.10 88 174 9.6E-13 T 29-03-2018 AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 Gene3D G3DSA:3.40.190.10 175 258 3.3E-25 T 29-03-2018 AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 Pfam PF03466 LysR substrate binding domain 88 288 7.4E-49 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS07510 1a3b4a4dfcfdc1cfbc9d16c02db35ca5 302 SUPERFAMILY SSF46785 4 111 1.28E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 61 120 13.282 T 29-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 87 107 9.4E-27 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 42 63 9.4E-27 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 63 83 9.4E-27 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 PRINTS PR01650 Bacterial translocase SecE signature 107 122 9.4E-27 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 Gene3D G3DSA:1.20.5.1030 66 117 8.8E-19 T 29-03-2018 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 66 122 2.1E-20 T 29-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 120 1.0E-19 T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11235 3240d2d2708734037cd547b4389ceb8c 122 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 29-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 6.3E-142 T 29-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 SUPERFAMILY SSF52540 10 225 1.45E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 Pfam PF00005 ABC transporter 19 162 7.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 Gene3D G3DSA:2.40.50.100 280 358 2.1E-21 T 29-03-2018 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 SMART SM00382 25 212 2.1E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 Gene3D G3DSA:3.40.50.300 1 234 1.2E-57 T 29-03-2018 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 SUPERFAMILY SSF50331 239 360 6.8E-21 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS28600 7bfdcdbaf912aaec96d448ebfdd7ccc7 361 Pfam PF03459 TOBE domain 297 359 7.8E-18 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM474_RS24715 cfe5084716fe77040069c0b90e114ec7 415 SUPERFAMILY SSF47240 56 388 5.73E-98 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS24715 cfe5084716fe77040069c0b90e114ec7 415 PIRSF PIRSF000355 64 415 2.8E-142 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24715 cfe5084716fe77040069c0b90e114ec7 415 Gene3D G3DSA:1.10.620.20 50 396 5.6E-102 T 29-03-2018 AM474_RS24715 cfe5084716fe77040069c0b90e114ec7 415 Pfam PF00268 Ribonucleotide reductase, small chain 95 382 1.1E-85 T 29-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS28190 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 2 124 6.53E-15 T 29-03-2018 AM474_RS28190 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Gene3D G3DSA:3.40.50.620 1 128 3.5E-12 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28190 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Gene3D G3DSA:3.40.50.620 132 276 1.4E-18 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28190 43d6ed368d8b4b31f6ffef4fe7846ec9 287 SUPERFAMILY SSF52402 133 276 1.34E-16 T 29-03-2018 AM474_RS28190 43d6ed368d8b4b31f6ffef4fe7846ec9 287 Pfam PF00582 Universal stress protein family 133 272 1.0E-13 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 SUPERFAMILY SSF51735 9 265 1.96E-80 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 Gene3D G3DSA:3.40.50.720 53 266 3.1E-66 T 29-03-2018 AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 Gene3D G3DSA:3.40.50.720 6 52 7.6E-12 T 29-03-2018 AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 6.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 Pfam PF00106 short chain dehydrogenase 15 201 2.0E-61 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.0E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.0E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.0E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10615 9a83d1d25e68c55c170e30102ce3a544 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 203 5.7E-6 T 29-03-2018 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Pfam PF13549 ATP-grasp domain 478 693 2.6E-51 T 29-03-2018 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 SUPERFAMILY SSF52210 292 454 8.61E-22 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 SUPERFAMILY SSF52210 129 286 7.06E-32 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Gene3D G3DSA:3.40.50.261 123 289 3.5E-25 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 SUPERFAMILY SSF51735 6 127 9.46E-23 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Pfam PF13380 CoA binding domain 25 130 3.1E-12 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Gene3D G3DSA:3.30.470.20 541 696 4.7E-32 T 29-03-2018 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Gene3D G3DSA:3.40.50.261 290 461 7.4E-21 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 285 1.1E-33 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 SUPERFAMILY SSF56059 481 692 1.96E-30 T 29-03-2018 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 SMART SM00881 9 99 1.5E-18 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS18285 0140d92c3fd0d024a84b93ab317bd58a 696 Gene3D G3DSA:3.40.50.720 5 122 1.4E-26 T 29-03-2018 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 Pfam PF00765 Autoinducer synthase 12 185 1.0E-29 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 ProSitePatterns PS00949 Autoinducer synthase family signature. 22 47 - T 29-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 6.2E-16 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 6.2E-16 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 142 163 6.2E-16 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 6.2E-16 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 Gene3D G3DSA:3.40.630.30 1 199 5.9E-32 T 29-03-2018 AM474_RS26280 e4527fef93e1ccd1f5dc9bf57f28f9b6 201 SUPERFAMILY SSF55729 7 191 1.11E-34 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 184 263 3.8E-17 T 29-03-2018 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF03466 LysR substrate binding domain 89 264 9.5E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF46785 1 112 6.01E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 7.1E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:3.40.190.10 92 183 4.1E-22 T 29-03-2018 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 SUPERFAMILY SSF53850 90 321 7.7E-42 T 29-03-2018 AM474_RS28000 3538cf533c1251bdad3bcc2232f03a2b 324 Gene3D G3DSA:1.10.10.10 1 91 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 SMART SM00387 357 460 1.6E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 SUPERFAMILY SSF47384 227 309 3.34E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 SUPERFAMILY SSF55874 298 458 2.1E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:1.10.287.130 234 305 1.9E-14 T 29-03-2018 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF08521 Two-component sensor kinase N-terminal 19 167 1.5E-41 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 3.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 3.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 3.0E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 459 8.4E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 SMART SM00388 244 309 2.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:3.30.565.10 317 460 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:1.20.5.1040 5 57 1.4E-6 T 29-03-2018 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Gene3D G3DSA:1.20.5.1040 144 191 0.16 T 29-03-2018 AM474_RS22425 b5f7f271b664a38b2db0dc72625818e3 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 2.4E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS31635 c295f2f5e9973a73393998c01eaca77a 301 Pfam PF00950 ABC 3 transport family 27 286 2.7E-51 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM474_RS31635 c295f2f5e9973a73393998c01eaca77a 301 SUPERFAMILY SSF81345 19 283 3.79E-32 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS31635 c295f2f5e9973a73393998c01eaca77a 301 Gene3D G3DSA:1.10.3470.10 4 291 1.7E-24 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 Pfam PF00929 Exonuclease 4 167 7.2E-39 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 238 1.1E-88 T 29-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 SUPERFAMILY SSF53098 1 177 2.64E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 178 1.4E-64 T 29-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 Gene3D G3DSA:3.30.420.10 2 181 8.5E-41 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS28360 0441252c6acfccaa254d1dc117920e11 246 SMART SM00479 2 176 1.2E-49 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 409 3.5E-12 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 114 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 Gene3D G3DSA:3.90.380.10 156 466 2.2E-58 T 29-03-2018 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 SUPERFAMILY SSF50022 20 163 6.94E-41 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 SUPERFAMILY SSF55961 166 465 5.22E-61 T 29-03-2018 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 Gene3D G3DSA:2.102.10.10 46 155 8.6E-20 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 105 125 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 33 58 1.9E-44 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00350 69ab42a20c14a9202b6ca42866c66e47 466 Pfam PF00355 Rieske [2Fe-2S] domain 49 132 9.7E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS17620 3974c7774f7d6094cb9f4a803c30daf9 231 Pfam PF05036 Sporulation related domain 152 222 3.3E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS17620 3974c7774f7d6094cb9f4a803c30daf9 231 SUPERFAMILY SSF110997 152 225 3.14E-17 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS17620 3974c7774f7d6094cb9f4a803c30daf9 231 Gene3D G3DSA:3.30.70.1070 149 228 1.2E-15 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.9E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 Pfam PF03466 LysR substrate binding domain 93 296 7.4E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF46785 2 82 4.03E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:1.10.10.10 1 87 1.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 SUPERFAMILY SSF53850 90 295 7.6E-50 T 29-03-2018 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 182 267 2.8E-16 T 29-03-2018 AM474_RS00050 d853f3452c1fbca8f6a7548a145eaddd 310 Gene3D G3DSA:3.40.190.10 94 181 2.3E-17 T 29-03-2018 AM474_RS09410 258af7dd577615863ce57f57c3f56572 259 SUPERFAMILY SSF53850 23 259 3.09E-85 T 29-03-2018 AM474_RS09410 258af7dd577615863ce57f57c3f56572 259 PIRSF PIRSF002854 1 259 3.2E-103 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS09410 258af7dd577615863ce57f57c3f56572 259 Pfam PF03180 NLPA lipoprotein 25 259 1.4E-101 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS09410 258af7dd577615863ce57f57c3f56572 259 Gene3D G3DSA:3.40.190.10 20 117 3.4E-24 T 29-03-2018 AM474_RS09410 258af7dd577615863ce57f57c3f56572 259 Gene3D G3DSA:3.40.190.10 118 259 5.3E-56 T 29-03-2018 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 536 611 3.2E-5 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 Gene3D G3DSA:1.10.8.60 534 627 4.6E-6 T 29-03-2018 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 SUPERFAMILY SSF52540 301 606 5.5E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 SMART SM01086 533 624 0.0012 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 Pfam PF07724 AAA domain (Cdc48 subfamily) 351 524 5.0E-32 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 400 418 2.2E-28 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 429 447 2.2E-28 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 462 476 2.2E-28 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 355 373 2.2E-28 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 SMART SM00382 351 496 2.5E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01495 c9f9e5a2d3463931fbea1b62322ef980 627 Gene3D G3DSA:3.40.50.300 303 531 4.2E-32 T 29-03-2018 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 173 427 9.68E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 658 739 2.9E-25 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 538 556 1.1E-37 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 614 1.1E-37 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 496 514 1.1E-37 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 567 585 1.1E-37 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 740 0.0 T 29-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF52540 442 744 1.52E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SUPERFAMILY SSF81923 1 142 5.1E-61 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 492 659 1.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM00382 211 356 5.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 658 758 3.0E-22 T 29-03-2018 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.4E-16 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 307 319 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 491 652 3.1E-49 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 455 656 1.9E-46 T 29-03-2018 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:3.40.50.300 170 355 5.3E-28 T 29-03-2018 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 216 328 5.8E-12 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 523 541 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.8.60 356 454 1.6E-27 T 29-03-2018 AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 SMART SM01086 658 748 3.0E-33 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS00940 3e54ac9fd6ff3c4b41e320f6db133cf0 758 Gene3D G3DSA:1.10.1780.10 1 143 2.8E-27 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS31215 e39b14b53d42cbd94daaba3050875b43 450 PIRSF PIRSF002746 5 450 2.2E-161 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM474_RS31215 e39b14b53d42cbd94daaba3050875b43 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 450 3.7E-162 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM474_RS31215 e39b14b53d42cbd94daaba3050875b43 450 Pfam PF02447 GntP family permease 10 449 3.0E-184 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 330 342 - T 29-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 SUPERFAMILY SSF48173 199 473 5.36E-109 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 Gene3D G3DSA:1.25.40.80 135 297 8.7E-39 T 29-03-2018 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 PRINTS PR00147 DNA photolyase signature 389 403 1.1E-22 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 PRINTS PR00147 DNA photolyase signature 350 368 1.1E-22 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 PRINTS PR00147 DNA photolyase signature 330 346 1.1E-22 T 29-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 Pfam PF00875 DNA photolyase 8 171 2.4E-44 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 Pfam PF03441 FAD binding domain of DNA photolyase 280 472 2.9E-82 T 29-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 SUPERFAMILY SSF52425 6 190 5.63E-51 T 29-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 Gene3D G3DSA:1.10.579.10 298 475 1.6E-73 T 29-03-2018 AM474_RS20010 d7f6bc25ab0a88f2bd1602dfb0d84a58 481 Gene3D G3DSA:3.40.50.620 4 134 1.3E-33 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 33 760 2.6E-126 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 Gene3D G3DSA:2.40.170.20 164 763 7.1E-77 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 Pfam PF00593 TonB dependent receptor 294 761 2.9E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 34 761 2.5E-161 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 Gene3D G3DSA:2.170.130.10 22 163 1.2E-30 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 SUPERFAMILY SSF56935 35 760 1.37E-122 T 29-03-2018 AM474_RS19710 20920ab2d5069a2256746846c0d23e95 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 155 5.9E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PIRSF PIRSF000410 3 280 4.7E-94 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 220 234 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 239 262 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 148 164 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 78 90 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 PRINTS PR00996 Glutamate methyltransferase family signature 114 134 1.1E-42 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 85 276 4.6E-55 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 SMART SM00138 19 280 3.1E-93 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 Gene3D G3DSA:3.40.50.150 84 280 1.2E-44 T 29-03-2018 AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 SUPERFAMILY SSF47757 12 84 1.57E-18 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 20 72 1.3E-15 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 SUPERFAMILY SSF53335 85 277 6.83E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS13895 b9c056ef42d5810dfe935e5e9c590dbb 280 Gene3D G3DSA:1.10.155.10 11 83 1.1E-19 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 SUPERFAMILY SSF46785 2 112 3.13E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 Pfam PF03466 LysR substrate binding domain 89 297 8.9E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 SUPERFAMILY SSF53850 91 301 7.14E-29 T 29-03-2018 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 Gene3D G3DSA:3.40.190.10 84 183 8.1E-20 T 29-03-2018 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 Gene3D G3DSA:3.40.190.10 184 263 9.5E-11 T 29-03-2018 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22335 9ecca904de24d4b1eec003e9fcb44f9b 304 Gene3D G3DSA:1.10.10.10 1 83 1.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 140 316 7.1E-58 T 29-03-2018 AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 SUPERFAMILY SSF53686 6 312 2.23E-98 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 313 1.4E-136 T 29-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 313 2.5E-131 T 29-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 Gene3D G3DSA:3.40.50.1100 42 139 1.9E-33 T 29-03-2018 AM474_RS01400 3aaa83da5f7ab17846598c2964c84fe9 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 302 1.5E-66 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS25895 c97bcf30fff780d6631d34ecd6ae1bdd 280 Pfam PF16344 Domain of unknown function (DUF4974) 173 266 9.4E-8 T 29-03-2018 IPR032508 Protein FecR, C-terminal AM474_RS25895 c97bcf30fff780d6631d34ecd6ae1bdd 280 PIRSF PIRSF018266 6 277 1.2E-74 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS25895 c97bcf30fff780d6631d34ecd6ae1bdd 280 Pfam PF04773 FecR protein 68 160 2.2E-19 T 29-03-2018 IPR006860 FecR protein AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 SUPERFAMILY SSF53800 3 335 1.42E-87 T 29-03-2018 AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 TIGRFAM TIGR00109 hemH: ferrochelatase 3 197 9.1E-39 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 Pfam PF00762 Ferrochelatase 4 332 6.0E-99 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 Gene3D G3DSA:3.40.50.1400 170 315 9.5E-38 T 29-03-2018 AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 Hamap MF_00323 Ferrochelatase [hemH]. 2 337 35.652 T 29-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM474_RS20035 0e09ceea3c7b082cfb0d42af05a09d38 340 Gene3D G3DSA:3.40.50.1400 1 169 7.2E-37 T 29-03-2018 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.30.70.270 377 542 8.4E-53 T 29-03-2018 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 2.1E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 246 376 4.6E-26 T 29-03-2018 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00267 366 537 2.6E-55 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 SMART SM00448 250 363 2.8E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 246 378 7.26E-30 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00072 Response regulator receiver domain 252 363 1.3E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 Gene3D G3DSA:3.40.50.2300 123 245 4.9E-7 T 29-03-2018 AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF52172 134 243 3.22E-5 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 SUPERFAMILY SSF55073 382 539 5.49E-48 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS18995 daafc09914968fb23bbe6aca45e9a83f 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 379 533 3.3E-41 T 29-03-2018 IPR000160 GGDEF domain AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 Gene3D G3DSA:3.30.920.10 1 111 5.8E-27 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 5 108 3.2E-34 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 Pfam PF01491 Frataxin-like domain 4 105 1.9E-22 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 ProSitePatterns PS01344 Frataxin family signature. 51 65 - T 29-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 Hamap MF_00142 Protein CyaY [cyaY]. 4 108 25.623 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 SUPERFAMILY SSF55387 2 106 3.49E-31 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS16440 1a209ae39dc3410429ff54689c551667 111 SMART SM01219 4 109 1.1E-46 T 29-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS09555 399f01d85b483436b763a6be0cbb7a13 244 Gene3D G3DSA:3.40.190.10 13 127 2.0E-8 T 29-03-2018 AM474_RS09555 399f01d85b483436b763a6be0cbb7a13 244 Gene3D G3DSA:3.40.190.10 140 240 1.3E-4 T 29-03-2018 AM474_RS09555 399f01d85b483436b763a6be0cbb7a13 244 SUPERFAMILY SSF53850 32 238 5.43E-23 T 29-03-2018 AM474_RS19755 64f288399d31217f31249bea00400ad0 520 Gene3D G3DSA:3.90.1200.10 121 333 3.9E-15 T 29-03-2018 AM474_RS19755 64f288399d31217f31249bea00400ad0 520 SUPERFAMILY SSF56112 9 294 6.12E-24 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS19755 64f288399d31217f31249bea00400ad0 520 Pfam PF01636 Phosphotransferase enzyme family 123 279 1.1E-5 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS19755 64f288399d31217f31249bea00400ad0 520 Pfam PF13671 AAA domain 338 487 1.1E-37 T 29-03-2018 AM474_RS19755 64f288399d31217f31249bea00400ad0 520 Gene3D G3DSA:3.40.50.300 338 493 7.9E-14 T 29-03-2018 AM474_RS19755 64f288399d31217f31249bea00400ad0 520 SUPERFAMILY SSF52540 339 516 4.22E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Gene3D G3DSA:3.30.450.20 53 163 2.6E-19 T 29-03-2018 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 SMART SM00283 370 631 6.9E-98 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Gene3D G3DSA:3.30.450.20 164 280 2.7E-24 T 29-03-2018 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 SMART SM00304 390 450 19.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 SMART SM00304 301 355 7.7E-16 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 SUPERFAMILY SSF58104 323 632 2.62E-76 T 29-03-2018 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 SUPERFAMILY SSF103190 93 184 1.54E-8 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Gene3D G3DSA:1.10.287.950 405 632 7.8E-51 T 29-03-2018 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Gene3D G3DSA:1.10.287.950 299 404 1.0E-7 T 29-03-2018 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Pfam PF02743 Cache domain 37 263 6.7E-34 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Pfam PF00672 HAMP domain 302 351 1.1E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21880 780b7631a76041644d661ff89ec38993 632 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 414 597 2.3E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS22365 a1ef6ac19b1bff8428a18e4191c28d1e 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 270 7.8E-53 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS22365 a1ef6ac19b1bff8428a18e4191c28d1e 272 Gene3D G3DSA:3.90.226.10 3 213 4.8E-62 T 29-03-2018 AM474_RS22365 a1ef6ac19b1bff8428a18e4191c28d1e 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 113 133 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS22365 a1ef6ac19b1bff8428a18e4191c28d1e 272 SUPERFAMILY SSF52096 18 271 1.4E-78 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS22365 a1ef6ac19b1bff8428a18e4191c28d1e 272 Gene3D G3DSA:1.10.12.10 215 272 1.9E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 Gene3D G3DSA:3.30.70.1560 155 213 9.4E-16 T 29-03-2018 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 SUPERFAMILY SSF55174 5 49 1.44E-10 T 29-03-2018 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 SUPERFAMILY SSF55120 65 235 1.52E-20 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 Gene3D G3DSA:3.30.70.580 62 154 1.9E-12 T 29-03-2018 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 Gene3D G3DSA:3.10.290.10 2 61 4.2E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 SMART SM00363 5 65 3.4E-5 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS24455 d32af425bbcf5edeeb92d45711df331b 236 Pfam PF01479 S4 domain 6 45 1.0E-6 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:2.40.50.140 618 697 8.7E-25 T 29-03-2018 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00575 S1 RNA binding domain 620 691 3.8E-18 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 451 550 4.49E-29 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 293 489 1.92E-49 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 14 252 9.9E-55 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF50249 615 693 1.94E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54211 3 143 4.0E-50 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.536 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF00013 KH domain 558 613 2.6E-12 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.1370.10 561 617 1.5E-16 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00316 621 691 8.9E-25 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 PIRSF PIRSF005499 1 700 4.9E-294 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 9.2E-6 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03725 3' exoribonuclease family, domain 2 146 210 4.4E-11 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:1.10.10.400 253 311 2.6E-15 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SMART SM00322 553 618 2.4E-13 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF55666 144 235 8.41E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 8.2E-23 T 29-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Gene3D G3DSA:3.30.230.70 312 560 1.1E-58 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.2E-22 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.7E-22 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 SUPERFAMILY SSF54791 556 641 7.01E-24 T 29-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM474_RS19550 95f3b645db0618eee5516e3ff1ae6931 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 0.0 T 29-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 SUPERFAMILY SSF46626 31 189 2.29E-51 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 Pfam PF00034 Cytochrome c 209 322 9.2E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 SUPERFAMILY SSF46626 188 344 7.76E-44 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 Gene3D G3DSA:1.10.760.10 205 332 3.6E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 Gene3D G3DSA:1.10.760.10 42 204 9.1E-46 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 Pfam PF03150 Di-haem cytochrome c peroxidase 53 201 5.4E-51 T 29-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 AM474_RS20405 75dfc213bbb3921896197ffa9b0523c8 346 PIRSF PIRSF000294 1 346 3.8E-158 T 29-03-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 AM474_RS26950 d34c1b7ae544d66d6be16d0adfd17204 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 8.5E-113 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26950 d34c1b7ae544d66d6be16d0adfd17204 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 1.3E-233 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS26950 d34c1b7ae544d66d6be16d0adfd17204 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26950 d34c1b7ae544d66d6be16d0adfd17204 475 Gene3D G3DSA:1.20.210.10 4 475 2.6E-97 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26950 d34c1b7ae544d66d6be16d0adfd17204 475 SUPERFAMILY SSF81442 9 468 3.27E-125 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS29250 29a781ee5f37ab997aa4367d8d18e1fe 250 Pfam PF03070 TENA/THI-4/PQQC family 14 222 1.7E-69 T 29-03-2018 IPR004305 Thiaminase-2/PQQC AM474_RS29250 29a781ee5f37ab997aa4367d8d18e1fe 250 Gene3D G3DSA:1.20.910.10 1 249 5.4E-41 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS29250 29a781ee5f37ab997aa4367d8d18e1fe 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 241 3.4E-124 T 29-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM474_RS29250 29a781ee5f37ab997aa4367d8d18e1fe 250 SUPERFAMILY SSF48613 2 248 9.34E-79 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS29250 29a781ee5f37ab997aa4367d8d18e1fe 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 142.529 T 29-03-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SMART SM01240 7 475 0.0 T 29-03-2018 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF54631 94 202 7.07E-26 T 29-03-2018 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF51412 216 479 3.53E-127 T 29-03-2018 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SUPERFAMILY SSF51412 2 90 3.53E-127 T 29-03-2018 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 PIRSF PIRSF000130 1 489 1.5E-203 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 1.1E-164 T 29-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 83.898 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 29-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 Gene3D G3DSA:3.20.20.70 1 486 1.3E-120 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 9.5E-191 T 29-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 95 139 3.4E-10 T 29-03-2018 IPR000644 CBS domain AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 Pfam PF00571 CBS domain 148 200 1.3E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 157 205 6.7E-4 T 29-03-2018 IPR000644 CBS domain AM474_RS08545 9a682aef3e301f9476152cddaa253426 489 SMART SM00116 96 143 7.1E-11 T 29-03-2018 IPR000644 CBS domain AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Gene3D G3DSA:3.40.50.300 148 324 8.0E-27 T 29-03-2018 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 SUPERFAMILY SSF52172 12 197 2.42E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Gene3D G3DSA:3.40.50.2300 1 147 4.0E-30 T 29-03-2018 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Pfam PF00072 Response regulator receiver domain 13 122 8.0E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 9.0E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Pfam PF00158 Sigma-54 interaction domain 152 318 6.0E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 SMART SM00382 172 315 3.1E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 5.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 5.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 SUPERFAMILY SSF52540 152 381 1.62E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 SMART SM00448 11 122 4.4E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Gene3D G3DSA:1.10.10.60 407 453 1.1E-11 T 29-03-2018 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 SUPERFAMILY SSF46689 397 448 1.79E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS17010 5d86977f458935522dfb430bcdac5b7b 462 Gene3D G3DSA:1.10.8.60 325 406 1.6E-20 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 186 206 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 134 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 162 183 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 PRINTS PR01166 Cytochrome c oxidase subunit II signature 93 113 1.4E-39 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Gene3D G3DSA:2.60.40.420 116 246 9.2E-50 T 29-03-2018 IPR008972 Cupredoxin AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 23 104 7.3E-13 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 187 235 - T 29-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 SUPERFAMILY SSF81464 12 112 4.74E-25 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 121 240 7.4E-37 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 32 251 4.1E-59 T 29-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Gene3D G3DSA:1.10.760.10 247 356 3.0E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 SUPERFAMILY SSF49503 116 257 9.84E-54 T 29-03-2018 IPR008972 Cupredoxin AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Gene3D G3DSA:1.10.287.90 21 114 4.7E-25 T 29-03-2018 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 SUPERFAMILY SSF46626 221 358 9.88E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14260 2441943c1549527b83a47e0e91c218ad 374 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 274 348 1.2E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 PIRSF PIRSF006250 7 282 5.4E-109 T 29-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 279 1.2E-56 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 113 2.3E-25 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 SUPERFAMILY SSF51690 116 280 2.04E-60 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 SUPERFAMILY SSF54675 12 114 7.06E-32 T 29-03-2018 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 Gene3D G3DSA:3.90.1170.20 4 140 1.3E-43 T 29-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 279 1.5E-94 T 29-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AM474_RS20760 58d59d25b35b74c01c648d940800ede7 282 Gene3D G3DSA:3.20.20.70 141 270 1.6E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 6.1E-41 T 29-03-2018 AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 190 0.0038 T 29-03-2018 AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 SUPERFAMILY SSF51735 4 256 9.32E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 8.5E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.5E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 8.5E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.5E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03775 b6f8b4053838827cae0509b47b830ccf 257 Gene3D G3DSA:3.40.50.720 2 257 1.8E-51 T 29-03-2018 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.30.1490.20 139 192 1.2E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 173.709 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.30.470.20 193 301 4.4E-16 T 29-03-2018 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 SUPERFAMILY SSF56059 124 311 2.83E-57 T 29-03-2018 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.2E-79 T 29-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 5.8E-44 T 29-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 Gene3D G3DSA:3.40.50.20 3 130 1.3E-47 T 29-03-2018 AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 SUPERFAMILY SSF52440 3 123 1.29E-42 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS12670 a5832b2b11243276d3a78106caf4626c 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 9.3E-136 T 29-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 405 523 7.3E-11 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.9E-67 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF74778 2 160 1.06E-68 T 29-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.40.1060.10 524 685 5.7E-28 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.20.19.10 162 363 1.9E-32 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF52016 161 372 3.57E-70 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.9E-96 T 29-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Gene3D G3DSA:3.30.499.10 686 868 2.2E-49 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 SUPERFAMILY SSF53732 379 858 4.71E-148 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 857 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 PIRSF PIRSF036687 1 862 0.0 T 29-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 AM474_RS28175 c0640becf0762a86a9a01a5bfcc8ce06 869 Pfam PF00330 Aconitase family (aconitate hydratase) 475 821 2.5E-40 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82866 804 1026 4.71E-47 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1440 671 765 9.0E-16 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1320 766 843 2.3E-8 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 148 184 4.24E-21 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 276 332 4.24E-21 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1430 38 140 3.0E-24 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.0E-100 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 38 129 2.09E-23 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82714 721 806 5.36E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.70.1430 569 667 9.5E-17 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82866 298 499 1.05E-49 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:3.30.2090.10 182 277 4.8E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:1.20.1640.10 290 512 4.9E-47 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82693 567 670 4.03E-24 T 29-03-2018 AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 SUPERFAMILY SSF82714 185 274 2.49E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS20345 36679da270af5a918fa6bddd83c12358 1043 Gene3D G3DSA:1.20.1640.10 844 1027 4.7E-37 T 29-03-2018 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 2.7E-16 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 SUPERFAMILY SSF50615 11 95 2.16E-28 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.4E-44 T 29-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 1.1E-72 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 50.076 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 SUPERFAMILY SSF47917 384 512 6.02E-45 T 29-03-2018 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 3.3E-252 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Gene3D G3DSA:3.40.50.300 84 376 7.5E-111 T 29-03-2018 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Gene3D G3DSA:2.40.30.20 4 83 1.2E-32 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 Gene3D G3DSA:1.20.150.20 385 511 3.9E-46 T 29-03-2018 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 PIRSF PIRSF039088 2 514 3.4E-233 T 29-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 SUPERFAMILY SSF52540 97 382 1.21E-92 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14960 1c67c891e5150989691777a4fceda99c 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 PIRSF PIRSF001535 1 571 2.3E-271 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 SUPERFAMILY SSF55681 405 476 2.4E-108 T 29-03-2018 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 SUPERFAMILY SSF55681 10 237 2.4E-108 T 29-03-2018 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Pfam PF03129 Anticodon binding domain 473 567 2.3E-16 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 SUPERFAMILY SSF55826 218 388 8.37E-29 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 42.63 T 29-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 3.3E-52 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 1.1E-23 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Gene3D G3DSA:3.30.930.10 11 458 3.2E-102 T 29-03-2018 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 Gene3D G3DSA:3.40.50.800 459 571 5.4E-29 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-19 T 29-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.6E-254 T 29-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM474_RS23505 51c1627bae0785cf7ada2cbd1a5c6bd5 571 SUPERFAMILY SSF52954 461 570 1.62E-28 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS08115 b0421c789979c3605c355900147762bb 437 Pfam PF00083 Sugar (and other) transporter 23 232 1.6E-24 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS08115 b0421c789979c3605c355900147762bb 437 Pfam PF00083 Sugar (and other) transporter 234 429 3.7E-13 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS08115 b0421c789979c3605c355900147762bb 437 SUPERFAMILY SSF103473 18 432 9.16E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS08115 b0421c789979c3605c355900147762bb 437 Gene3D G3DSA:1.20.1250.20 16 229 4.9E-21 T 29-03-2018 AM474_RS08115 b0421c789979c3605c355900147762bb 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 319 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS08115 b0421c789979c3605c355900147762bb 437 Gene3D G3DSA:1.20.1250.20 230 436 1.8E-25 T 29-03-2018 AM474_RS08115 b0421c789979c3605c355900147762bb 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 28 419 6.8E-136 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM474_RS08575 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:3.40.190.10 89 179 7.0E-17 T 29-03-2018 AM474_RS08575 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:3.40.190.10 180 272 1.6E-18 T 29-03-2018 AM474_RS08575 54acaee59c44177edc6726f756193259 302 SUPERFAMILY SSF53850 91 299 5.04E-30 T 29-03-2018 AM474_RS08575 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08575 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08575 54acaee59c44177edc6726f756193259 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.5E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08575 54acaee59c44177edc6726f756193259 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.1E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08575 54acaee59c44177edc6726f756193259 302 Gene3D G3DSA:1.10.10.10 1 86 1.3E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08575 54acaee59c44177edc6726f756193259 302 SUPERFAMILY SSF46785 3 87 1.85E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08575 54acaee59c44177edc6726f756193259 302 Pfam PF03466 LysR substrate binding domain 88 296 5.1E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS09815 baf73e7157e84b82880d29f8b1010246 207 Gene3D G3DSA:3.30.160.150 20 170 8.4E-34 T 29-03-2018 AM474_RS09815 baf73e7157e84b82880d29f8b1010246 207 Pfam PF04390 Lipopolysaccharide-assembly 35 155 8.6E-10 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM474_RS09815 baf73e7157e84b82880d29f8b1010246 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 161 23.432 T 29-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 374 388 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 10 230 4.0E-13 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 Pfam PF00012 Hsp70 protein 299 395 6.4E-10 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 6 188 1.5E-33 T 29-03-2018 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 8 21 1.2E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 190 200 1.2E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 124 144 1.2E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 PRINTS PR00301 70kDa heat shock protein signature 36 48 1.2E-7 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 Gene3D G3DSA:3.30.420.40 189 398 1.7E-31 T 29-03-2018 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 9 175 7.45E-28 T 29-03-2018 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 179 247 4.57E-35 T 29-03-2018 AM474_RS18835 f52a06057b8449ec8f2f3cd00e42eb87 421 SUPERFAMILY SSF53067 296 416 4.57E-35 T 29-03-2018 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.983 T 29-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 SUPERFAMILY SSF51395 13 322 1.3E-94 T 29-03-2018 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 Gene3D G3DSA:3.20.20.70 9 251 9.9E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 Pfam PF01207 Dihydrouridine synthase (Dus) 16 320 5.7E-110 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 PIRSF PIRSF006621 3 330 7.1E-107 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 Gene3D G3DSA:1.10.1200.80 255 330 1.8E-24 T 29-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM474_RS18950 fb789150cafe1cd4a6e2454b685ce83e 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 321 1.1E-126 T 29-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 Gene3D G3DSA:1.10.630.10 8 222 3.1E-15 T 29-03-2018 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00385 P450 superfamily signature 292 303 9.4E-11 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00385 P450 superfamily signature 240 257 9.4E-11 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00385 P450 superfamily signature 375 386 9.4E-11 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00385 P450 superfamily signature 366 375 9.4E-11 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 Pfam PF00067 Cytochrome P450 228 398 2.5E-40 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 368 377 - T 29-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00463 E-class P450 group I signature 249 275 2.8E-17 T 29-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00463 E-class P450 group I signature 291 309 2.8E-17 T 29-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00463 E-class P450 group I signature 332 356 2.8E-17 T 29-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00463 E-class P450 group I signature 375 398 2.8E-17 T 29-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 PRINTS PR00463 E-class P450 group I signature 365 375 2.8E-17 T 29-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 SUPERFAMILY SSF48264 27 424 4.45E-66 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS07755 6e7cdb374e17b6ef1003f0682281667c 425 Gene3D G3DSA:1.10.630.10 223 425 3.7E-51 T 29-03-2018 AM474_RS13540 11f5ffc1fdf5466c208eff7cb92c7c23 148 Pfam PF13508 Acetyltransferase (GNAT) domain 53 126 3.7E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS13540 11f5ffc1fdf5466c208eff7cb92c7c23 148 SUPERFAMILY SSF55729 3 145 5.32E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS13540 11f5ffc1fdf5466c208eff7cb92c7c23 148 Gene3D G3DSA:3.40.630.30 5 148 2.4E-27 T 29-03-2018 AM474_RS28925 b7010ad7fed9941a4418e09cf44ca64d 653 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 158 9.2E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS28925 b7010ad7fed9941a4418e09cf44ca64d 653 Gene3D G3DSA:2.40.170.20 167 653 3.1E-84 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS28925 b7010ad7fed9941a4418e09cf44ca64d 653 SUPERFAMILY SSF56935 37 653 5.64E-127 T 29-03-2018 AM474_RS28925 b7010ad7fed9941a4418e09cf44ca64d 653 Pfam PF00593 TonB dependent receptor 243 649 4.6E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS28925 b7010ad7fed9941a4418e09cf44ca64d 653 Gene3D G3DSA:2.170.130.10 28 165 4.7E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS12320 b9fafc4e4d40b6e3f94cc54b66f716e2 249 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 80 9.4E-21 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS12320 b9fafc4e4d40b6e3f94cc54b66f716e2 249 Gene3D G3DSA:1.20.1050.10 93 235 3.8E-18 T 29-03-2018 AM474_RS12320 b9fafc4e4d40b6e3f94cc54b66f716e2 249 SUPERFAMILY SSF52833 5 104 6.16E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS12320 b9fafc4e4d40b6e3f94cc54b66f716e2 249 SUPERFAMILY SSF47616 72 207 4.04E-17 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS12320 b9fafc4e4d40b6e3f94cc54b66f716e2 249 Gene3D G3DSA:3.40.30.10 3 92 1.0E-24 T 29-03-2018 AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 Gene3D G3DSA:3.30.1360.40 3 89 1.0E-12 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 SMART SM00796 6 207 2.8E-85 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 206 2.6E-60 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 Gene3D G3DSA:2.40.100.10 91 225 4.6E-43 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 SUPERFAMILY SSF50891 94 223 6.83E-41 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS29855 d9638c107e1f3703df78f072eb21fd2a 237 SUPERFAMILY SSF160467 7 97 7.32E-13 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 SUPERFAMILY SSF54373 175 275 3.92E-46 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 Gene3D G3DSA:3.50.50.60 3 167 4.1E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.5E-32 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.5E-32 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 1.5E-32 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.5E-32 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.5E-32 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 Gene3D G3DSA:3.30.9.10 316 388 9.5E-17 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 Gene3D G3DSA:3.30.9.10 168 284 4.2E-49 T 29-03-2018 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 2.7E-221 T 29-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 SUPERFAMILY SSF51905 274 389 1.36E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 SUPERFAMILY SSF51905 1 172 1.36E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13550 3a9abe800e2a416287837ac6e18daab7 394 Pfam PF01494 FAD binding domain 2 343 1.4E-98 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS13285 4fcda84b83244b35f5202bf0fa83086b 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 363 1.3E-128 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM474_RS13285 4fcda84b83244b35f5202bf0fa83086b 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 364 7.0E-184 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM474_RS13285 4fcda84b83244b35f5202bf0fa83086b 368 Gene3D G3DSA:3.75.10.10 1 368 2.2E-146 T 29-03-2018 AM474_RS13285 4fcda84b83244b35f5202bf0fa83086b 368 SUPERFAMILY SSF55909 5 364 6.78E-146 T 29-03-2018 AM474_RS13285 4fcda84b83244b35f5202bf0fa83086b 368 Hamap MF_01841 Agmatine deiminase [aguA]. 6 364 62.936 T 29-03-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 Pfam PF01545 Cation efflux family 19 208 6.0E-45 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 289 6.4E-88 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 Gene3D G3DSA:3.30.70.1350 209 291 1.9E-13 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 SUPERFAMILY SSF161111 13 209 1.44E-55 T 29-03-2018 AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 SUPERFAMILY SSF160240 213 286 1.57E-8 T 29-03-2018 AM474_RS12720 85de9240e60b89418de050fa86f0774f 299 Gene3D G3DSA:1.20.1510.10 12 208 2.2E-53 T 29-03-2018 AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 239 248 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 Gene3D G3DSA:1.10.8.60 199 269 1.1E-21 T 29-03-2018 AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 51 64 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 Pfam PF00158 Sigma-54 interaction domain 32 186 5.4E-48 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 SUPERFAMILY SSF52540 28 267 3.32E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 SMART SM00382 47 191 1.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 Gene3D G3DSA:3.40.50.300 22 198 1.3E-20 T 29-03-2018 AM474_RS09415 e49504ecbc6c72c451ff8ec2acf422c0 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 112 127 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF00849 RNA pseudouridylate synthase 78 209 6.2E-15 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.30.70.580 72 159 7.3E-18 T 29-03-2018 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55120 77 247 2.28E-42 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 Pfam PF01479 S4 domain 15 59 2.0E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 SMART SM00363 14 76 1.0E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 82 244 9.6E-54 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.30.70.1560 160 229 3.5E-19 T 29-03-2018 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 116 130 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 SUPERFAMILY SSF55174 13 106 5.05E-14 T 29-03-2018 AM474_RS05130 1bbe369818e4a0b600d0da874d4754b2 386 Gene3D G3DSA:3.10.290.10 12 71 7.6E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS11480 4acfda87cba83b3f321fbe46c0514ea5 209 Pfam PF00182 Chitinase class I 114 167 1.6E-4 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS11480 4acfda87cba83b3f321fbe46c0514ea5 209 Gene3D G3DSA:3.30.20.10 93 154 2.5E-17 T 29-03-2018 AM474_RS11480 4acfda87cba83b3f321fbe46c0514ea5 209 SUPERFAMILY SSF53955 104 208 3.94E-47 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS11480 4acfda87cba83b3f321fbe46c0514ea5 209 SUPERFAMILY SSF53955 2 76 3.94E-47 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS21215 79bfbe63499e19485a2225b30f3fd531 345 PRINTS PR00069 Aldo-keto reductase signature 163 180 2.2E-7 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS21215 79bfbe63499e19485a2225b30f3fd531 345 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.2E-7 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS21215 79bfbe63499e19485a2225b30f3fd531 345 Pfam PF00248 Aldo/keto reductase family 16 336 3.6E-66 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS21215 79bfbe63499e19485a2225b30f3fd531 345 SUPERFAMILY SSF51430 1 343 1.09E-105 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS21215 79bfbe63499e19485a2225b30f3fd531 345 Gene3D G3DSA:3.20.20.100 1 345 2.4E-91 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS03050 56572ea17da67388ec0f5068ffe26107 77 Pfam PF11660 Protein of unknown function (DUF3262) 1 76 1.3E-25 T 29-03-2018 IPR021676 Protein of unknown function DUF3262 AM474_RS03050 56572ea17da67388ec0f5068ffe26107 77 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 2 77 1.6E-31 T 29-03-2018 IPR021676 Protein of unknown function DUF3262 AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 SUPERFAMILY SSF55785 58 171 1.1E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 Pfam PF08447 PAS fold 75 163 5.2E-24 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 SUPERFAMILY SSF55073 225 370 1.26E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 369 9.9E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 51 177 9.7E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 Gene3D G3DSA:3.30.450.20 25 197 8.2E-26 T 29-03-2018 AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 369 2.9E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 Gene3D G3DSA:3.30.70.270 203 376 1.4E-50 T 29-03-2018 AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 SMART SM00091 52 120 4.7E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS13030 43256d5cc13f011859b4ddbc1dea231c 376 SMART SM00267 209 376 2.8E-57 T 29-03-2018 IPR000160 GGDEF domain AM474_RS06665 a47b1f541044c43025b40546271a2580 221 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 219 30.28 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AM474_RS06665 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 100 171 7.9E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06665 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 13 90 1.34E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06665 a47b1f541044c43025b40546271a2580 221 Pfam PF04337 Protein of unknown function, DUF480 14 158 2.8E-55 T 29-03-2018 IPR007432 Protein of unknown function DUF480 AM474_RS06665 a47b1f541044c43025b40546271a2580 221 Gene3D G3DSA:1.10.10.10 11 94 1.9E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06665 a47b1f541044c43025b40546271a2580 221 SUPERFAMILY SSF46785 95 174 2.68E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 SUPERFAMILY SSF46894 133 224 4.54E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 SUPERFAMILY SSF52172 1 123 6.83E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 Gene3D G3DSA:3.40.50.2300 1 118 2.3E-31 T 29-03-2018 AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.3E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 SMART SM00862 148 224 4.4E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 Gene3D G3DSA:1.10.10.10 119 229 1.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 Pfam PF00072 Response regulator receiver domain 4 112 3.8E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12375 fd71bdcf405927820c403377ffb26ac8 229 SMART SM00448 2 112 5.1E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 8.8E-133 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.10.275.10 1 117 6.2E-42 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 SUPERFAMILY SSF48557 10 455 6.44E-106 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.10.40.30 392 446 2.0E-30 T 29-03-2018 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 Pfam PF00206 Lyase 14 313 6.1E-67 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 Gene3D G3DSA:1.20.200.10 118 391 1.8E-86 T 29-03-2018 AM474_RS00985 68f325d0ac2e6b42ebe501805a56536f 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.7E-50 T 29-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 Pfam PF12833 Helix-turn-helix domain 183 260 9.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 167 206 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 SMART SM00342 177 259 7.2E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 Gene3D G3DSA:1.10.10.60 214 264 1.8E-11 T 29-03-2018 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 SUPERFAMILY SSF46689 161 211 8.51E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 SUPERFAMILY SSF51215 21 144 2.35E-15 T 29-03-2018 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 Pfam PF02311 AraC-like ligand binding domain 12 141 1.4E-21 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 SUPERFAMILY SSF46689 213 261 4.48E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 Gene3D G3DSA:1.10.10.60 166 213 1.6E-12 T 29-03-2018 AM474_RS12625 5dfa5a250fe28dde42577e40149d0188 264 Gene3D G3DSA:2.60.120.280 5 165 7.4E-8 T 29-03-2018 AM474_RS06325 d18134ee772cb6cf5131e97265eb169f 137 SUPERFAMILY SSF54593 5 127 3.49E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS06325 d18134ee772cb6cf5131e97265eb169f 137 Gene3D G3DSA:3.10.180.10 5 135 1.1E-27 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS06325 d18134ee772cb6cf5131e97265eb169f 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.9E-19 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 Pfam PF01740 STAS domain 404 486 6.6E-8 T 29-03-2018 IPR002645 STAS domain AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 Gene3D G3DSA:3.30.750.24 389 484 2.6E-13 T 29-03-2018 IPR002645 STAS domain AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 SUPERFAMILY SSF52091 395 485 2.94E-11 T 29-03-2018 IPR002645 STAS domain AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 Pfam PF00916 Sulfate permease family 167 345 7.0E-28 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS01820 a254b2a599edd3f57845df4163cbf989 495 Pfam PF00916 Sulfate permease family 14 143 3.3E-28 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS17640 8b6d31de5bff809a9a31fe02fdd7a0dc 255 SMART SM00318 24 155 3.3E-14 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS17640 8b6d31de5bff809a9a31fe02fdd7a0dc 255 SUPERFAMILY SSF50199 22 156 1.83E-28 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS17640 8b6d31de5bff809a9a31fe02fdd7a0dc 255 Gene3D G3DSA:2.40.50.90 20 159 2.1E-26 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain AM474_RS17640 8b6d31de5bff809a9a31fe02fdd7a0dc 255 Pfam PF00565 Staphylococcal nuclease homologue 47 154 2.5E-16 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS23100 19ca2c39b398e5ce435d7aa45576cbf1 331 PIRSF PIRSF006470 1 329 1.0E-123 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS23100 19ca2c39b398e5ce435d7aa45576cbf1 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 265 1.5E-74 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS23100 19ca2c39b398e5ce435d7aa45576cbf1 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 8.5E-107 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 136 2.6E-13 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 SUPERFAMILY SSF48019 242 424 1.36E-70 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Gene3D G3DSA:1.10.3710.10 338 435 1.9E-33 T 29-03-2018 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Gene3D G3DSA:1.20.272.10 242 336 3.1E-35 T 29-03-2018 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 SUPERFAMILY SSF52540 11 224 4.36E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 424 3.6E-65 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Gene3D G3DSA:1.10.8.60 152 231 1.3E-15 T 29-03-2018 AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 SMART SM00382 46 163 3.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Pfam PF16193 AAA C-terminal domain 181 257 2.5E-18 T 29-03-2018 IPR032423 AAA C-terminal domain AM474_RS03155 1c206f7407cbcc305f399d82266a7d34 437 Gene3D G3DSA:3.40.50.300 5 151 2.5E-22 T 29-03-2018 AM474_RS08880 d925f3efaeb61ecf72ce715d74d4962c 137 Pfam PF09413 Putative prokaryotic signal transducing protein 5 66 9.4E-9 T 29-03-2018 IPR018551 Domain of unknown function DUF2007 AM474_RS08880 d925f3efaeb61ecf72ce715d74d4962c 137 Gene3D G3DSA:3.30.70.790 2 74 7.3E-15 T 29-03-2018 AM474_RS08880 d925f3efaeb61ecf72ce715d74d4962c 137 SUPERFAMILY SSF54913 4 67 5.11E-6 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 Gene3D G3DSA:1.20.120.30 24 186 4.6E-16 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 7.3E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 7.3E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 7.3E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 7.3E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 SUPERFAMILY SSF58104 232 540 1.18E-76 T 29-03-2018 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 1.5E-23 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 SMART SM00283 279 540 6.3E-80 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 507 1.0E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 SMART SM00304 265 317 29.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 SMART SM00304 212 264 2.1E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS27215 ab2a22519f0c9de9bcd12216057b89be 541 Gene3D G3DSA:1.10.287.950 304 541 5.0E-54 T 29-03-2018 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF55874 552 722 3.8E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF52172 741 855 1.37E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00086 414 456 3.2E-7 T 29-03-2018 IPR001610 PAC motif AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00086 126 169 26.0 T 29-03-2018 IPR001610 PAC motif AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:3.30.450.40 172 327 2.7E-14 T 29-03-2018 IPR029016 GAF domain-like AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Pfam PF08448 PAS fold 74 171 1.5E-7 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Pfam PF08448 PAS fold 351 458 1.4E-11 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 497 559 1.5E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00091 345 411 6.1E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 342 463 1.3E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00388 496 561 4.8E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF55785 334 454 2.62E-22 T 29-03-2018 IPR000014 PAS domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Pfam PF00072 Response regulator receiver domain 744 850 1.3E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF47384 490 558 4.32E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:3.30.450.20 328 483 1.3E-32 T 29-03-2018 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 700 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 719 1.5E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:3.30.565.10 559 722 6.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:3.30.450.20 58 171 7.9E-9 T 29-03-2018 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF55781 171 337 2.4E-15 T 29-03-2018 IPR029016 GAF domain-like AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:3.40.50.2300 734 857 1.3E-25 T 29-03-2018 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00448 742 850 1.0E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 604 720 1.8E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SUPERFAMILY SSF55785 75 175 5.76E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 Gene3D G3DSA:1.10.287.130 484 557 3.3E-10 T 29-03-2018 AM474_RS25215 085d74bc8bf88054cbc8ac359a8f51e4 858 SMART SM00387 602 722 1.7E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF50331 255 381 1.25E-15 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 SUPERFAMILY SSF52540 22 260 4.91E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 Pfam PF00005 ABC transporter 39 180 9.6E-38 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 Pfam PF08402 TOBE domain 300 382 1.4E-16 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 382 8.1E-129 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 Gene3D G3DSA:3.40.50.300 18 252 2.9E-74 T 29-03-2018 AM474_RS13235 64375893897fefd4c7a79411f630f6a8 384 SMART SM00382 47 230 1.2E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 4.4E-25 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:1.10.150.20 244 327 1.1E-28 T 29-03-2018 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.1E-23 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 SMART SM00662 23 233 2.2E-109 T 29-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 7.3E-110 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.081 T 29-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF55257 6 53 4.51E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF55257 178 232 4.51E-30 T 29-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 307 3.3E-24 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 1.0E-36 T 29-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:3.30.1360.10 4 92 9.1E-18 T 29-03-2018 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 Gene3D G3DSA:3.30.1360.10 111 230 1.2E-27 T 29-03-2018 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF56553 53 177 7.59E-42 T 29-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11045 d59065b8ad2b988fdb7db42eafde225b 333 SUPERFAMILY SSF47789 250 323 8.89E-26 T 29-03-2018 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 Pfam PF00664 ABC transporter transmembrane region 61 313 6.4E-29 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 SMART SM00382 384 575 7.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 Gene3D G3DSA:1.20.1560.10 6 347 8.0E-46 T 29-03-2018 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 Pfam PF00005 ABC transporter 375 523 5.2E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 SUPERFAMILY SSF52540 356 591 8.98E-80 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 Gene3D G3DSA:3.40.50.300 357 590 1.8E-67 T 29-03-2018 AM474_RS22965 66bd1a6473e1a15eacb9850c9c961178 596 SUPERFAMILY SSF90123 13 343 1.83E-54 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 SMART SM00882 6 202 1.0E-79 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 29-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 Gene3D G3DSA:3.40.1080.10 3 210 9.6E-73 T 29-03-2018 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 207 1.2E-98 T 29-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 SUPERFAMILY SSF100950 3 209 2.65E-74 T 29-03-2018 AM474_RS00675 e3d2827a1ac7713724c2c3fe2db1eadb 210 Pfam PF01144 Coenzyme A transferase 6 198 5.9E-41 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 SUPERFAMILY SSF55103 222 463 1.54E-60 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:3.30.465.10 94 236 1.1E-38 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 Pfam PF01565 FAD binding domain 41 179 2.2E-37 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 8.3E-66 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 SUPERFAMILY SSF56176 4 217 1.26E-65 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:1.10.45.10 422 461 2.4E-16 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS13150 2d5433120a2623181cf2f8b162f83f2d 464 Gene3D G3DSA:3.30.43.10 1 93 5.4E-24 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PIRSF PIRSF019574 1 361 1.3E-108 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 SUPERFAMILY SSF53850 23 358 1.66E-82 T 29-03-2018 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 260 279 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 305 331 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 1.6E-50 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 Gene3D G3DSA:3.40.190.10 17 197 1.2E-26 T 29-03-2018 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 Gene3D G3DSA:3.40.190.10 198 331 7.2E-16 T 29-03-2018 AM474_RS25115 fff5e2f295e3a1aa50c1cd101b7941e1 370 Pfam PF13416 Bacterial extracellular solute-binding protein 40 326 2.7E-27 T 29-03-2018 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Gene3D G3DSA:1.10.287.130 229 300 2.3E-10 T 29-03-2018 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 SUPERFAMILY SSF55874 293 461 1.15E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 SMART SM00388 239 304 2.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 SUPERFAMILY SSF47384 222 303 1.2E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Gene3D G3DSA:1.20.5.1040 7 61 2.7E-6 T 29-03-2018 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Gene3D G3DSA:1.20.5.1040 140 186 4.5E-4 T 29-03-2018 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Gene3D G3DSA:3.30.565.10 308 467 1.6E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 SMART SM00387 348 459 1.2E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 4.4E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 458 1.2E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 7.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 7.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 7.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19345 256ca6b0719321fcf75b3c3aabbb4baa 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 7.8E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 Pfam PF00326 Prolyl oligopeptidase family 466 681 2.9E-69 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 534 554 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 450 468 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 523 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 592 607 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 476 500 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 610 632 1.7E-51 T 29-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 Gene3D G3DSA:3.40.50.1820 392 682 5.3E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 Gene3D G3DSA:2.130.10.120 65 391 4.8E-54 T 29-03-2018 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 14 402 1.3E-78 T 29-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 SUPERFAMILY SSF53474 417 660 1.22E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25585 21225775f43c7e06c2b59abdc9531999 683 SUPERFAMILY SSF50993 2 410 1.96E-86 T 29-03-2018 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 79 741 2.1E-228 T 29-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Gene3D G3DSA:2.40.50.140 658 743 5.4E-18 T 29-03-2018 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 742 2.4E-261 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 71 151 1.5E-17 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 224 658 2.86E-146 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF00575 S1 RNA binding domain 659 740 6.9E-11 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00316 659 742 3.9E-11 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF08206 Ribonuclease B OB domain 91 148 5.9E-22 T 29-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF08461 Ribonuclease R winged-helix domain 27 81 4.6E-8 T 29-03-2018 IPR013668 Ribonuclease R winged-helix domain AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Hamap MF_01895 Ribonuclease R [rnr]. 42 742 57.11 T 29-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Pfam PF00773 RNB domain 264 597 8.8E-110 T 29-03-2018 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 ProSitePatterns PS01175 Ribonuclease II family signature. 565 589 - T 29-03-2018 IPR022966 Ribonuclease II/R, conserved site AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 Gene3D G3DSA:1.10.10.10 22 81 9.2E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00955 264 598 3.9E-187 T 29-03-2018 AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 142 239 6.43E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SUPERFAMILY SSF50249 661 741 2.46E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS18505 80fda1776639f507bfa9c51e5fdd3511 905 SMART SM00357 90 149 5.1E-12 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 Gene3D G3DSA:3.40.50.720 1 200 5.8E-36 T 29-03-2018 AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 Gene3D G3DSA:3.90.25.10 201 352 3.7E-51 T 29-03-2018 AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 2.0E-100 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 SUPERFAMILY SSF51735 1 335 9.26E-90 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 337 4.4E-151 T 29-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM474_RS17035 1e46e9042f3690ad17b473c7a8db2e8c 352 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 SUPERFAMILY SSF46785 3 88 4.15E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 Gene3D G3DSA:1.10.10.10 1 80 2.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 Pfam PF03466 LysR substrate binding domain 89 303 1.3E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 SUPERFAMILY SSF53850 88 306 1.03E-23 T 29-03-2018 AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 Gene3D G3DSA:3.40.190.10 81 189 6.4E-12 T 29-03-2018 AM474_RS22730 46f9142526d6657735372fa25431c6c4 317 Gene3D G3DSA:3.40.190.10 190 273 1.3E-11 T 29-03-2018 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 94 191 6.5E-35 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 3 87 3.3E-20 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 Pfam PF00677 Lumazine binding domain 100 184 2.5E-24 T 29-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 Gene3D G3DSA:2.40.30.20 1 89 1.8E-25 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 93 194 7.4E-32 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 SUPERFAMILY SSF63380 1 88 4.0E-25 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 PIRSF PIRSF000498 1 212 9.1E-77 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10145 3c4c0239ad845e416fe3beeaedd18205 219 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 2.6E-65 T 29-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF52777 201 418 2.11E-9 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 477 872 1.1E-103 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.40.50.980 596 762 2.9E-35 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF00501 AMP-binding enzyme 456 847 1.2E-78 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF00668 Condensation domain 1359 1785 6.6E-54 T 29-03-2018 IPR001242 Condensation domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:1.10.1200.10 1239 1331 7.9E-19 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF52777 1553 1779 4.78E-39 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF52777 1355 1561 3.11E-38 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:1.10.1200.10 1772 1862 6.9E-8 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF53474 1875 2111 1.92E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF52777 21 212 4.22E-11 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.40.50.1820 1866 2113 2.2E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 947 1122 4.3E-28 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SMART SM00824 Thioesterase 1889 2111 1.6E-4 T 29-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:2.30.38.10 763 841 4.7E-19 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF56801 1192 1269 1.01E-123 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF56801 414 906 1.01E-123 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.40.50.980 447 595 2.4E-32 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SMART SM00823 Phosphopantetheine attachment site 1257 1325 0.0065 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SMART SM00823 Phosphopantetheine attachment site 1792 1843 0.11 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF47336 1792 1853 3.02E-6 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1815 1830 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF47336 1250 1321 3.14E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF53335 1067 1152 2.66E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 SUPERFAMILY SSF53335 917 1029 2.66E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.40.50.150 930 1166 4.7E-37 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF00975 Thioesterase domain 1887 2107 1.2E-32 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF05050 Methyltransferase FkbM domain 950 1147 1.9E-13 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.30.559.10 1332 1551 6.0E-31 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Gene3D G3DSA:3.30.559.10 2 172 1.3E-6 T 29-03-2018 AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF00550 Phosphopantetheine attachment site 1259 1321 3.0E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 Pfam PF00550 Phosphopantetheine attachment site 1794 1855 3.1E-5 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31120 639a77522149b7e4d2bc59ee32ba3038 2125 ProSitePatterns PS00455 Putative AMP-binding domain signature. 593 604 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 SMART SM00481 6 73 2.8E-25 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 736 2.9E-176 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:1.10.150.280 787 895 2.9E-10 T 29-03-2018 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF01336 OB-fold nucleic acid binding domain 1009 1083 6.3E-10 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:2.40.50.140 991 1088 1.1E-16 T 29-03-2018 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1045 0.0 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Gene3D G3DSA:3.20.20.140 3 255 3.1E-37 T 29-03-2018 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 SUPERFAMILY SSF89550 5 262 1.24E-14 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF14579 Helix-hairpin-helix motif 810 895 8.5E-26 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS07560 4c997f9b40caaf134b7a8a8c44916c55 1173 Pfam PF02811 PHP domain 7 171 2.3E-41 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM474_RS18410 c581e54cb592b47f2541111de6ad9054 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 29-03-2018 IPR000540 Flagellar motor protein MotA, conserved site AM474_RS18410 c581e54cb592b47f2541111de6ad9054 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 3.4E-9 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS18410 c581e54cb592b47f2541111de6ad9054 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 8.8E-114 T 29-03-2018 IPR022522 Flagellar motor stator, MotA AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 613 1.0E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 SMART SM00283 385 646 2.0E-84 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 541 1.1E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.1E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 483 510 1.1E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 Pfam PF00672 HAMP domain 314 367 4.4E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 SMART SM01358 37 292 1.1E-34 T 29-03-2018 IPR032255 Helical bimodular sensor domain AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 SUPERFAMILY SSF58104 343 647 1.05E-78 T 29-03-2018 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 Pfam PF16591 Helical bimodular sensor domain 47 286 2.3E-41 T 29-03-2018 IPR032255 Helical bimodular sensor domain AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 Gene3D G3DSA:1.10.287.950 311 420 3.1E-9 T 29-03-2018 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 Gene3D G3DSA:1.10.287.950 421 647 6.7E-56 T 29-03-2018 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 SMART SM00304 314 370 8.7E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS17510 1dab4b46affb4bc2b9bd52b9c9c6fea2 647 SMART SM00304 377 423 21.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 Pfam PF00202 Aminotransferase class-III 30 440 5.2E-88 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 Gene3D G3DSA:3.90.1150.10 329 444 1.9E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 Gene3D G3DSA:3.40.640.10 74 328 2.3E-68 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 Gene3D G3DSA:3.90.1150.10 1 73 0.0094 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS16245 4cdf92b9fc342126c6dda454cfc6816d 444 SUPERFAMILY SSF53383 3 441 3.27E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 SUPERFAMILY SSF47203 224 374 3.22E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Gene3D G3DSA:2.40.110.10 120 214 2.6E-30 T 29-03-2018 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Gene3D G3DSA:1.20.140.10 215 374 7.0E-52 T 29-03-2018 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 373 3.1E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 2.1E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 214 8.7E-21 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 Gene3D G3DSA:1.10.540.10 3 119 6.1E-39 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00270 26a4cf2de93f0586fc47f6a7288128a9 374 SUPERFAMILY SSF56645 4 237 3.4E-81 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.130.10.10 322 430 1.3E-9 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:3.40.50.10070 24 161 8.3E-38 T 29-03-2018 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 428 4.1E-155 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF04052 TolB amino-terminal domain 25 126 6.2E-30 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Hamap MF_00671 Protein TolB [tolB]. 4 427 34.732 T 29-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.60.120.20 177 232 8.8E-7 T 29-03-2018 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.60.120.20 278 321 7.3E-13 T 29-03-2018 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Gene3D G3DSA:2.60.120.20 233 277 2.3E-11 T 29-03-2018 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF52964 29 158 2.75E-39 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 372 400 0.043 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 236 271 7.8E-13 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 279 314 1.9E-13 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 Pfam PF07676 WD40-like Beta Propeller Repeat 200 227 9.6E-7 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM474_RS23595 0fc8f5568ecfc9aa4a711002589b18fe 432 SUPERFAMILY SSF69304 153 429 2.22E-54 T 29-03-2018 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 SUPERFAMILY SSF143548 17 157 2.88E-44 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 Gene3D G3DSA:1.10.4100.10 232 443 2.6E-33 T 29-03-2018 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 455 7.1E-217 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 Pfam PF03315 Serine dehydratase beta chain 4 156 7.0E-58 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 Gene3D G3DSA:3.30.1330.90 11 159 3.1E-55 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM474_RS31815 56b54af7ea7d1a1917b24e4867c8addf 458 Pfam PF03313 Serine dehydratase alpha chain 187 452 6.4E-106 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 14 214 8.3E-84 T 29-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 Gene3D G3DSA:3.40.50.300 3 221 1.8E-41 T 29-03-2018 AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 Pfam PF00005 ABC transporter 30 169 4.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 SUPERFAMILY SSF52540 10 200 3.62E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26490 1d64e2939e889cabc8b859f009ad0b77 233 SMART SM00382 38 231 1.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 Gene3D G3DSA:3.40.50.720 4 50 6.8E-8 T 29-03-2018 AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 Gene3D G3DSA:3.40.50.720 51 241 1.6E-58 T 29-03-2018 AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 SUPERFAMILY SSF51735 10 239 3.25E-72 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 238 1.7E-57 T 29-03-2018 AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.2E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10380 6d61a17e115da725efe65781f77971eb 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 Gene3D G3DSA:3.50.50.60 141 237 3.8E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 Gene3D G3DSA:3.50.50.60 17 140 1.1E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 286 2.1E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 3.2E-8 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 19 41 3.2E-8 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 151 3.2E-8 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 117 125 3.2E-8 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 SUPERFAMILY SSF51905 129 229 2.59E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.6E-12 T 29-03-2018 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 1.6E-12 T 29-03-2018 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 116 134 1.6E-12 T 29-03-2018 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 SUPERFAMILY SSF51905 13 134 6.76E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10720 63ca8dae971a8bdb5775e43c30e0d5a3 310 SUPERFAMILY SSF51905 239 305 6.76E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23795 0947d111c1e889d4fda73956cb3664e6 125 Pfam PF01627 Hpt domain 33 98 2.5E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23795 0947d111c1e889d4fda73956cb3664e6 125 SUPERFAMILY SSF47226 13 95 3.66E-16 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23795 0947d111c1e889d4fda73956cb3664e6 125 Gene3D G3DSA:1.20.120.160 5 120 4.5E-16 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:1.20.1640.10 806 1026 4.7E-38 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:1.20.1640.10 283 502 1.2E-47 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1430 560 656 1.6E-12 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82714 708 791 4.58E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.70.1430 40 143 6.7E-24 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82714 183 268 1.44E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82866 294 493 6.41E-48 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.2090.10 707 793 4.7E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 40 134 2.96E-22 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 558 649 4.97E-12 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Gene3D G3DSA:3.30.2090.10 181 271 7.4E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82866 794 1019 1.15E-43 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 135 182 5.23E-19 T 29-03-2018 AM474_RS32295 f48c79798a74782a92f3913c5baf0771 1036 SUPERFAMILY SSF82693 270 326 5.23E-19 T 29-03-2018 AM474_RS21575 7a47e2274047e77e782c39d110faf632 200 Pfam PF01810 LysE type translocator 15 198 4.8E-42 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 SUPERFAMILY SSF54862 3 101 3.35E-22 T 29-03-2018 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.1E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 Gene3D G3DSA:3.30.70.20 2 45 2.0E-11 T 29-03-2018 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.9E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.9E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.9E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 Gene3D G3DSA:3.30.70.20 46 109 5.1E-7 T 29-03-2018 AM474_RS01435 87b5db5063e260f18e64edbdcc31346c 112 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 1.5E-14 T 29-03-2018 IPR022569 Ferredoxin, C-terminal AM474_RS21195 0ed0ee5e702838f652009009a6127f7e 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 54.614 T 29-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 AM474_RS21195 0ed0ee5e702838f652009009a6127f7e 364 Pfam PF03969 AFG1-like ATPase 1 360 1.1E-169 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM474_RS21195 0ed0ee5e702838f652009009a6127f7e 364 Gene3D G3DSA:3.40.50.300 18 357 2.5E-14 T 29-03-2018 AM474_RS21195 0ed0ee5e702838f652009009a6127f7e 364 SUPERFAMILY SSF52540 53 197 3.84E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 Gene3D G3DSA:3.40.190.10 182 269 8.8E-26 T 29-03-2018 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 SUPERFAMILY SSF46785 8 115 1.36E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 Gene3D G3DSA:3.40.190.10 95 181 5.2E-13 T 29-03-2018 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 SUPERFAMILY SSF53850 92 300 5.27E-38 T 29-03-2018 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 Gene3D G3DSA:1.10.10.10 2 87 2.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25710 4272896a353730b249771299b2dd4f7a 302 Pfam PF03466 LysR substrate binding domain 91 298 6.6E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03385 311f0f434d1f1f081ad666928e29803e 263 Gene3D G3DSA:3.90.226.10 4 198 4.7E-45 T 29-03-2018 AM474_RS03385 311f0f434d1f1f081ad666928e29803e 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 262 1.3E-37 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS03385 311f0f434d1f1f081ad666928e29803e 263 SUPERFAMILY SSF52096 9 263 1.55E-60 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS03385 311f0f434d1f1f081ad666928e29803e 263 Gene3D G3DSA:1.10.12.10 199 263 1.1E-9 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 SUPERFAMILY SSF52540 4 66 5.65E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 SUPERFAMILY SSF52540 99 283 5.65E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF00005 ABC transporter 21 211 7.0E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 1.1E-8 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 Gene3D G3DSA:3.40.50.300 1 289 2.9E-56 T 29-03-2018 AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 SMART SM00382 30 261 8.5E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18650 5a148be6e30b256d65ebbb73ad16adce 290 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 SUPERFAMILY SSF103473 10 452 8.89E-93 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 Gene3D G3DSA:1.20.1250.20 9 214 1.1E-44 T 29-03-2018 AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 Pfam PF00083 Sugar (and other) transporter 56 453 8.1E-49 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS06740 12c59ea33e94c9421d05bd9af4b50d9d 455 Gene3D G3DSA:1.20.1250.20 241 455 8.9E-28 T 29-03-2018 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 4.3E-49 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 PIRSF PIRSF001394 1 506 1.7E-226 T 29-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 Pfam PF05683 Fumarase C-terminus 289 488 5.6E-80 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 Gene3D G3DSA:3.20.130.10 315 488 2.4E-66 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 SUPERFAMILY SSF117457 318 487 8.5E-64 T 29-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 7.1E-102 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM474_RS21740 8bf24bf300f122323a783ad8bfc0488e 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 2.0E-66 T 29-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AM474_RS16940 641468108a6acd44416f189735e6d063 279 Pfam PF02634 FdhD/NarQ family 41 273 2.7E-66 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM474_RS16940 641468108a6acd44416f189735e6d063 279 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 17 278 27.608 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM474_RS16940 641468108a6acd44416f189735e6d063 279 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 261 2.1E-47 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM474_RS16940 641468108a6acd44416f189735e6d063 279 Gene3D G3DSA:3.10.20.10 42 128 9.0E-20 T 29-03-2018 AM474_RS16940 641468108a6acd44416f189735e6d063 279 PIRSF PIRSF015626 9 279 3.0E-72 T 29-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AM474_RS16940 641468108a6acd44416f189735e6d063 279 Gene3D G3DSA:3.40.140.10 142 276 4.5E-38 T 29-03-2018 AM474_RS16940 641468108a6acd44416f189735e6d063 279 SUPERFAMILY SSF53927 36 273 5.11E-67 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 PIRSF PIRSF002741 1 606 4.5E-98 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 517 2.6E-68 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 Gene3D G3DSA:3.90.76.10 64 218 3.0E-25 T 29-03-2018 AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 Gene3D G3DSA:3.10.105.10 331 574 1.6E-45 T 29-03-2018 AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 Gene3D G3DSA:3.40.190.10 219 330 8.2E-19 T 29-03-2018 AM474_RS28335 165d41e9c6f90c3ea20d2a5534db607e 609 SUPERFAMILY SSF53850 48 603 3.26E-115 T 29-03-2018 AM474_RS16455 e8747ff19f1c916d90bbec0785373ac2 232 PIRSF PIRSF032817 1 232 8.7E-109 T 29-03-2018 IPR017008 Uncharacterised conserved protein UCP032817 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 351 373 4.9E-5 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 97 4.9E-5 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 256 278 4.9E-5 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 Pfam PF00361 Proton-conducting membrane transporter 126 401 1.9E-64 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 2.3E-11 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 Pfam PF13244 Domain of unknown function (DUF4040) 611 674 1.7E-17 T 29-03-2018 IPR025383 Domain of unknown function DUF4040 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 911 3.3E-37 T 29-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 8.6E-38 T 29-03-2018 AM474_RS24140 b8c856ec16bd5e4f38d57e83208aea3f 933 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 8.6E-38 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 9.2E-25 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 SUPERFAMILY SSF56801 3 623 1.22E-156 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:2.30.38.10 403 493 2.2E-14 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:3.40.50.980 242 402 1.5E-38 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:3.30.300.30 494 604 1.2E-25 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 3.4E-13 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Gene3D G3DSA:3.40.50.980 50 241 3.9E-41 T 29-03-2018 AM474_RS07175 d1392a2137f209d97275419f6e8d4a34 628 Pfam PF00501 AMP-binding enzyme 64 500 3.5E-85 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS28435 c7f04675c200a332bf4c9b03279abbd6 236 SUPERFAMILY SSF53254 4 226 1.21E-38 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS28435 c7f04675c200a332bf4c9b03279abbd6 236 SMART SM00855 3 179 6.1E-12 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS28435 c7f04675c200a332bf4c9b03279abbd6 236 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 219 5.5E-23 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS28435 c7f04675c200a332bf4c9b03279abbd6 236 Gene3D G3DSA:3.40.50.1240 1 230 6.5E-37 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS16035 8a309ee6424a6f8bd34de1017ed4c924 359 SUPERFAMILY SSF55103 140 355 1.2E-19 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS16035 8a309ee6424a6f8bd34de1017ed4c924 359 Gene3D G3DSA:3.30.465.10 59 180 1.7E-26 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS16035 8a309ee6424a6f8bd34de1017ed4c924 359 Pfam PF01565 FAD binding domain 14 143 6.3E-19 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS16035 8a309ee6424a6f8bd34de1017ed4c924 359 Gene3D G3DSA:1.10.45.10 318 357 6.1E-8 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS16035 8a309ee6424a6f8bd34de1017ed4c924 359 SUPERFAMILY SSF56176 19 181 1.64E-27 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 SMART SM00829 22 339 1.2E-5 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 3.9E-43 T 29-03-2018 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 Pfam PF00107 Zinc-binding dehydrogenase 161 300 5.7E-18 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 SUPERFAMILY SSF50129 7 147 9.6E-48 T 29-03-2018 IPR011032 GroES-like AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 Gene3D G3DSA:3.40.50.720 152 282 4.5E-28 T 29-03-2018 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 Gene3D G3DSA:3.90.180.10 2 151 9.9E-37 T 29-03-2018 AM474_RS30310 c60793de55df0fac0aad13e372d96258 345 SUPERFAMILY SSF51735 127 305 4.62E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 SUPERFAMILY SSF69349 444 626 1.8E-37 T 29-03-2018 AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 SUPERFAMILY SSF69279 10 184 5.16E-57 T 29-03-2018 AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 Gene3D G3DSA:2.40.50.230 372 454 2.4E-39 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 SUPERFAMILY SSF69279 184 366 3.4E-45 T 29-03-2018 AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 SUPERFAMILY SSF69255 366 454 2.46E-34 T 29-03-2018 AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 Pfam PF05954 Phage late control gene D protein (GPD) 29 322 3.5E-79 T 29-03-2018 AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 1.2E-204 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 1.4E-125 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS16490 15d269f7ba2cc94a1a76349e15556aa3 691 Gene3D G3DSA:3.55.50.10 95 188 2.4E-31 T 29-03-2018 AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 493 1.3E-155 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 13 195 3.5E-33 T 29-03-2018 AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 Gene3D G3DSA:1.20.1250.20 255 504 1.8E-25 T 29-03-2018 AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 Pfam PF07690 Major Facilitator Superfamily 19 413 4.9E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 8 199 3.01E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 471 496 3.01E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS17045 16a071c4edc24c44346f2669ba432b27 509 SUPERFAMILY SSF103473 251 422 3.01E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF00549 CoA-ligase 262 382 1.4E-24 T 29-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.40.50.261 240 385 1.4E-42 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.1490.20 21 95 5.8E-26 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.519 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF52210 240 384 8.9E-54 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Pfam PF08442 ATP-grasp domain 2 203 3.9E-83 T 29-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 SUPERFAMILY SSF56059 1 237 1.9E-82 T 29-03-2018 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-177 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 PIRSF PIRSF001554 1 388 2.2E-157 T 29-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 29-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS27115 14a7396624b7f524b09554cb0ddc0fb9 388 Gene3D G3DSA:3.30.470.20 96 239 3.8E-54 T 29-03-2018 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 Gene3D G3DSA:1.20.140.10 289 455 4.0E-34 T 29-03-2018 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 443 6.3E-35 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 Gene3D G3DSA:2.40.110.10 177 288 1.1E-26 T 29-03-2018 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 276 3.1E-16 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 SUPERFAMILY SSF56645 101 296 1.26E-40 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 SUPERFAMILY SSF47203 285 445 4.99E-39 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS07315 82e5b7bf076e8d87abe41f0977bbe520 575 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 402 421 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:2.30.30.40 105 147 4.0E-13 T 29-03-2018 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 PIRSF PIRSF002867 1 308 1.5E-108 T 29-03-2018 IPR024181 Chemotaxis response regulator CheV AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Pfam PF01584 CheW-like domain 21 156 3.3E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SUPERFAMILY SSF50341 16 156 5.75E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SMART SM00448 179 300 1.3E-18 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:3.40.50.2300 165 309 1.2E-24 T 29-03-2018 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SMART SM00260 17 153 4.0E-20 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Pfam PF00072 Response regulator receiver domain 181 300 2.0E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 SUPERFAMILY SSF52172 179 303 1.12E-24 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS06085 91e6d1a1fe8bda4631d89b1bf475bb4c 310 Gene3D G3DSA:2.40.50.180 39 104 2.2E-13 T 29-03-2018 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 7.0E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 7.0E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 7.0E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 7.0E-41 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 Pfam PF03840 Preprotein translocase SecG subunit 5 74 6.4E-20 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS19500 f8e6a4a5d504a26ec373d4937aaf4cb8 129 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 74 1.2E-24 T 29-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 6.1E-87 T 29-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.30.70.20 122 144 3.6E-9 T 29-03-2018 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Pfam PF14697 4Fe-4S dicluster domain 106 160 1.4E-17 T 29-03-2018 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 PIRSF PIRSF005784 3 186 1.0E-84 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.30.70.20 145 178 4.1E-6 T 29-03-2018 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 SUPERFAMILY SSF54862 40 172 3.14E-28 T 29-03-2018 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Gene3D G3DSA:3.30.70.20 26 121 4.8E-11 T 29-03-2018 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 184 41.022 T 29-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 AM474_RS06865 c7d03df2e7fbfdfe17fca7191d874acf 188 Pfam PF04060 Putative Fe-S cluster 44 75 4.4E-14 T 29-03-2018 IPR007202 4Fe-4S domain GO:0051536 AM474_RS07210 f21a02637524229fe4004312376d3a70 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS07210 f21a02637524229fe4004312376d3a70 65 SUPERFAMILY SSF55008 2 64 2.62E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS07210 f21a02637524229fe4004312376d3a70 65 Pfam PF00403 Heavy-metal-associated domain 3 60 1.6E-12 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS07210 f21a02637524229fe4004312376d3a70 65 Gene3D G3DSA:3.30.70.100 1 65 1.5E-17 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:3.40.50.300 291 501 3.3E-30 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 1.1E-41 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 TIGRFAM TIGR00763 lon: endopeptidase La 8 766 3.3E-302 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 SMART SM00382 344 488 9.3E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 2.5E-54 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 2.5E-54 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 2.5E-54 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 2.5E-54 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 2.5E-54 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:2.30.130.40 2 114 9.3E-30 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:1.10.8.60 502 571 1.1E-31 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:1.10.4060.10 119 207 1.2E-27 T 29-03-2018 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF88697 6 197 4.72E-49 T 29-03-2018 IPR015947 PUA-like domain AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF54211 590 765 4.55E-58 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 SUPERFAMILY SSF52540 309 581 6.88E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 PIRSF PIRSF001174 1 770 0.0 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 1.1E-97 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 484 9.3E-19 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Hamap MF_01973 Lon protease [lon]. 7 767 71.453 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 SMART SM00464 6 198 5.2E-73 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS28290 e3b82f29519787baf8b24a3ad64e9b26 798 Gene3D G3DSA:3.30.230.10 572 791 5.7E-67 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 Gene3D G3DSA:1.10.510.10 336 531 9.4E-38 T 29-03-2018 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 Pfam PF00069 Protein kinase domain 259 454 5.4E-26 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 Gene3D G3DSA:3.60.40.10 4 223 1.7E-31 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 SMART SM00220 255 506 2.2E-13 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 SMART SM00331 16 222 1.0E-11 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 Pfam PF13672 Protein phosphatase 2C 11 180 4.6E-8 T 29-03-2018 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 SMART SM00332 1 220 8.9E-5 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 SUPERFAMILY SSF56112 240 507 1.17E-50 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 Gene3D G3DSA:3.30.200.20 247 335 2.8E-4 T 29-03-2018 AM474_RS28150 75ecdd475c6f1bf14fa8ae4e4eceac38 549 SUPERFAMILY SSF81606 3 222 7.46E-45 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS20770 12c32f752d148e67bfc051c25be7d133 188 Gene3D G3DSA:3.40.80.10 4 188 3.2E-51 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS20770 12c32f752d148e67bfc051c25be7d133 188 SUPERFAMILY SSF55846 7 181 1.31E-65 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS20770 12c32f752d148e67bfc051c25be7d133 188 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 169 3.6E-27 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS20770 12c32f752d148e67bfc051c25be7d133 188 SMART SM00644 18 169 1.6E-60 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:3.40.50.300 1 139 5.7E-22 T 29-03-2018 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 SUPERFAMILY SSF48019 213 337 3.57E-32 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 SUPERFAMILY SSF52540 1 211 1.31E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 6.6E-33 T 29-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 216 339 8.1E-14 T 29-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 336 2.3E-111 T 29-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:1.10.8.60 144 221 1.0E-26 T 29-03-2018 AM474_RS09820 524a5e2de4a75a114e6607229260e4ce 345 Gene3D G3DSA:1.20.272.10 222 340 7.7E-27 T 29-03-2018 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:1.10.10.10 2 89 1.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 Pfam PF03466 LysR substrate binding domain 95 301 2.8E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF53850 97 302 1.78E-38 T 29-03-2018 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 188 272 3.7E-16 T 29-03-2018 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 Gene3D G3DSA:3.40.190.10 98 187 1.2E-22 T 29-03-2018 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 SUPERFAMILY SSF46785 5 116 5.69E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31990 07ff96bb647b7b315ea579d461637721 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.1E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS20130 293c81901f44f7c1ff916f0f708e5f34 386 Gene3D G3DSA:3.40.1130.10 57 312 6.5E-18 T 29-03-2018 AM474_RS20130 293c81901f44f7c1ff916f0f708e5f34 386 SUPERFAMILY SSF69593 89 239 3.92E-6 T 29-03-2018 AM474_RS20130 293c81901f44f7c1ff916f0f708e5f34 386 Pfam PF01553 Acyltransferase 90 210 2.8E-8 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS13015 bc4a6739c192451f20105d9ce37dbc41 266 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 259 2.0E-85 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM474_RS13015 bc4a6739c192451f20105d9ce37dbc41 266 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 19.917 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM474_RS13015 bc4a6739c192451f20105d9ce37dbc41 266 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM474_RS13015 bc4a6739c192451f20105d9ce37dbc41 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 254 7.9E-84 T 29-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 AM474_RS21635 1a141869bf5d5eacedc988bfd9c9645a 100 Pfam PF12840 Helix-turn-helix domain 6 78 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21635 1a141869bf5d5eacedc988bfd9c9645a 100 Gene3D G3DSA:1.10.10.10 14 61 5.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21635 1a141869bf5d5eacedc988bfd9c9645a 100 SUPERFAMILY SSF46785 3 97 1.15E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21635 1a141869bf5d5eacedc988bfd9c9645a 100 Gene3D G3DSA:1.10.10.10 62 96 1.9E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21635 1a141869bf5d5eacedc988bfd9c9645a 100 SMART SM00418 7 98 9.8E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 5.0E-33 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF54719 88 201 3.27E-43 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 Gene3D G3DSA:1.10.287.990 20 89 2.5E-29 T 29-03-2018 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PIRSF PIRSF000349 1 203 7.9E-80 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 4.1E-37 T 29-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 29-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 SUPERFAMILY SSF46609 1 90 1.31E-37 T 29-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.9E-28 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 3.9E-28 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.9E-28 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.9E-28 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS21045 5cfe4531640d7a7710ea4d31c0fc9e82 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 3.9E-28 T 29-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 Gene3D G3DSA:3.90.380.10 144 421 2.8E-49 T 29-03-2018 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 SUPERFAMILY SSF55961 156 414 2.43E-49 T 29-03-2018 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 80 103 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 Pfam PF00355 Rieske [2Fe-2S] domain 37 121 1.1E-18 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 22 47 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 52 67 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 73 93 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 6.4E-32 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 157 410 4.3E-17 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 Gene3D G3DSA:2.102.10.10 35 143 8.4E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS29750 610ebe397d436142b9e5f1ebfb98c02c 424 SUPERFAMILY SSF50022 8 151 2.62E-42 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS26930 a89145b2963255e7c9ff9be5c6981b29 475 Gene3D G3DSA:1.20.210.10 3 475 1.4E-94 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26930 a89145b2963255e7c9ff9be5c6981b29 475 SUPERFAMILY SSF81442 9 468 9.55E-122 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26930 a89145b2963255e7c9ff9be5c6981b29 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 6.5E-226 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS26930 a89145b2963255e7c9ff9be5c6981b29 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26930 a89145b2963255e7c9ff9be5c6981b29 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 4.0E-112 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26910 a89145b2963255e7c9ff9be5c6981b29 475 Gene3D G3DSA:1.20.210.10 3 475 1.4E-94 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26910 a89145b2963255e7c9ff9be5c6981b29 475 SUPERFAMILY SSF81442 9 468 9.55E-122 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26910 a89145b2963255e7c9ff9be5c6981b29 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 472 6.5E-226 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS26910 a89145b2963255e7c9ff9be5c6981b29 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS26910 a89145b2963255e7c9ff9be5c6981b29 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 4.0E-112 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.30.300.30 456 561 1.2E-26 T 29-03-2018 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF00501 AMP-binding enzyme 31 461 1.1E-106 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 2.9E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 218 373 3.3E-42 T 29-03-2018 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:3.40.50.980 22 217 1.0E-38 T 29-03-2018 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 SUPERFAMILY SSF56801 18 557 3.01E-149 T 29-03-2018 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 Gene3D G3DSA:2.30.38.10 374 454 2.4E-27 T 29-03-2018 AM474_RS05815 385cef239568202fe5ab91ed38c3b06c 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 SUPERFAMILY SSF57863 84 142 1.7E-8 T 29-03-2018 AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 Gene3D G3DSA:2.40.50.140 5 73 4.4E-17 T 29-03-2018 AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 SUPERFAMILY SSF50249 10 73 1.71E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 Pfam PF11967 Recombination protein O N terminal 7 73 2.3E-15 T 29-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 Hamap MF_00201 DNA repair protein RecO [recO]. 3 228 19.607 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 Pfam PF02565 Recombination protein O C terminal 80 222 7.0E-23 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM474_RS22505 35d76a4d8f45c4a604fcdd19e278b6da 233 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 145 9.2E-19 T 29-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM474_RS25965 d051720ca3a52efbbaea3604ca0d8489 157 SUPERFAMILY SSF55729 1 150 9.92E-20 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS25965 d051720ca3a52efbbaea3604ca0d8489 157 Pfam PF00583 Acetyltransferase (GNAT) family 53 145 1.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS25965 d051720ca3a52efbbaea3604ca0d8489 157 Gene3D G3DSA:3.40.630.30 1 156 9.8E-19 T 29-03-2018 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.9E-37 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 Gene3D G3DSA:3.90.470.10 1 110 2.8E-42 T 29-03-2018 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.9E-45 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 SUPERFAMILY SSF54843 1 109 6.8E-42 T 29-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.804 T 29-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11145 d9dac43286d48fa21d0b5cdb26095755 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 29-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS09860 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 SUPERFAMILY SSF117991 7 93 4.32E-25 T 29-03-2018 IPR027471 YbeD-like domain AM474_RS09860 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Gene3D G3DSA:3.30.70.260 8 93 1.8E-27 T 29-03-2018 AM474_RS09860 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 93 25.298 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM474_RS09860 ad39e6c9a6c5d5d7a072e6fc03cb36b9 93 Pfam PF04359 Protein of unknown function (DUF493) 10 93 2.1E-27 T 29-03-2018 IPR007454 Uncharacterised protein family UPF0250 AM474_RS16785 bcdc1229be6a994b223ef0042bbbb5ff 454 Gene3D G3DSA:2.40.320.10 1 213 1.4E-41 T 29-03-2018 AM474_RS16785 bcdc1229be6a994b223ef0042bbbb5ff 454 SMART SM01118 2 207 1.4E-32 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM474_RS16785 bcdc1229be6a994b223ef0042bbbb5ff 454 SUPERFAMILY SSF55154 1 211 1.96E-40 T 29-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 AM474_RS16785 bcdc1229be6a994b223ef0042bbbb5ff 454 Pfam PF01928 CYTH domain 3 201 5.5E-38 T 29-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 SUPERFAMILY SSF56059 85 347 1.77E-68 T 29-03-2018 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Gene3D G3DSA:3.40.50.20 3 130 6.7E-53 T 29-03-2018 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 SMART SM00878 338 444 4.3E-51 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 1.3E-32 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 SUPERFAMILY SSF51246 333 447 1.36E-36 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 SUPERFAMILY SSF52440 3 115 7.19E-51 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Gene3D G3DSA:3.30.470.20 206 447 3.5E-102 T 29-03-2018 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 6.2E-72 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 9.9E-47 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 SUPERFAMILY SSF51230 585 658 1.96E-19 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Gene3D G3DSA:3.30.1490.20 131 204 1.7E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Pfam PF00364 Biotin-requiring enzyme 591 656 1.9E-13 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 614 631 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 Gene3D G3DSA:2.40.50.100 588 659 1.2E-17 T 29-03-2018 AM474_RS03640 89f6bb119c3f7a244d537205371fb6d3 661 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS13710 67b2041c27435a75a8e05b0852428d9e 254 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 61 9.0E-26 T 29-03-2018 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal AM474_RS13710 67b2041c27435a75a8e05b0852428d9e 254 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 6.0E-111 T 29-03-2018 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 SUPERFAMILY SSF46689 284 330 3.85E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 SMART SM00342 248 331 8.2E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 Pfam PF01965 DJ-1/PfpI family 44 197 1.7E-17 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 Pfam PF12833 Helix-turn-helix domain 254 329 7.9E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 Gene3D G3DSA:3.40.50.880 23 247 1.0E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 Gene3D G3DSA:1.10.10.60 248 288 2.7E-6 T 29-03-2018 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 Gene3D G3DSA:1.10.10.60 289 333 6.6E-9 T 29-03-2018 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 SUPERFAMILY SSF46689 232 282 1.16E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10795 b4a04d9204e9c314088e5bc17e980926 340 SUPERFAMILY SSF52317 29 214 1.34E-35 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 SUPERFAMILY SSF54534 177 281 5.63E-26 T 29-03-2018 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 SUPERFAMILY SSF54534 285 387 5.76E-34 T 29-03-2018 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Pfam PF13616 PPIC-type PPIASE domain 282 385 1.8E-28 T 29-03-2018 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Hamap MF_01183 Chaperone SurA [surA]. 12 430 33.051 T 29-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Pfam PF00639 PPIC-type PPIASE domain 184 276 4.3E-19 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 SUPERFAMILY SSF109998 30 207 8.44E-45 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Gene3D G3DSA:1.10.4030.10 28 153 7.4E-22 T 29-03-2018 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Pfam PF09312 SurA N-terminal domain 30 147 6.5E-46 T 29-03-2018 IPR015391 SurA N-terminal AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Gene3D G3DSA:3.10.50.40 174 285 1.2E-23 T 29-03-2018 AM474_RS11655 cbd92da08bf60119a45f75039e765997 430 Gene3D G3DSA:3.10.50.40 286 395 7.1E-34 T 29-03-2018 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 SUPERFAMILY SSF51215 22 146 1.83E-16 T 29-03-2018 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 Pfam PF02311 AraC-like ligand binding domain 13 142 5.0E-25 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 Pfam PF12833 Helix-turn-helix domain 185 262 3.4E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 Gene3D G3DSA:1.10.10.60 164 221 1.1E-10 T 29-03-2018 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 Gene3D G3DSA:2.60.120.280 12 149 2.4E-12 T 29-03-2018 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 Gene3D G3DSA:1.10.10.60 222 266 4.2E-15 T 29-03-2018 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 3.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 3.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 SMART SM00342 179 261 8.8E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 SUPERFAMILY SSF46689 166 213 8.06E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 SUPERFAMILY SSF46689 216 263 2.91E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS16100 61dc57eff56d7107e460238553af750e 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 257 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 5.3E-39 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.3E-39 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.3E-39 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 5.3E-39 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.3E-39 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 SUPERFAMILY SSF52317 153 377 2.29E-62 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 SUPERFAMILY SSF52021 4 144 1.96E-56 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 Gene3D G3DSA:3.50.30.20 2 151 2.5E-62 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 SMART SM01097 3 133 8.9E-92 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.9E-144 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.1E-51 T 29-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.1E-11 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.1E-11 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.1E-11 T 29-03-2018 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.686 T 29-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 Gene3D G3DSA:3.40.50.880 152 378 1.1E-67 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS19445 20a5411eee1fa3866ee730691e99259a 378 Pfam PF00117 Glutamine amidotransferase class-I 197 372 4.0E-47 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53623 97 326 6.41E-77 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Pfam PF08245 Mur ligase middle domain 106 306 2.3E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.90.190.20 333 486 1.0E-46 T 29-03-2018 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Pfam PF01225 Mur ligase family, catalytic domain 18 94 6.1E-12 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1390.10 3 96 5.9E-22 T 29-03-2018 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF53244 329 480 5.95E-47 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 35.031 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 17 479 2.2E-155 T 29-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 SUPERFAMILY SSF63418 11 95 6.28E-21 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Gene3D G3DSA:3.40.1190.10 97 331 1.6E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21305 da32671baca46154d92bd53fed7cb036 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 412 4.8E-22 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1275 1286 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF56801 8 561 1.57E-118 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:1.10.1200.10 581 664 4.3E-17 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00668 Condensation domain 675 1115 7.8E-98 T 29-03-2018 IPR001242 Condensation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00668 Condensation domain 1727 2174 6.3E-105 T 29-03-2018 IPR001242 Condensation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00668 Condensation domain 2787 3217 6.3E-82 T 29-03-2018 IPR001242 Condensation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00668 Condensation domain 3248 3698 1.0E-90 T 29-03-2018 IPR001242 Condensation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SMART SM00823 Phosphopantetheine attachment site 2709 2776 0.0081 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SMART SM00823 Phosphopantetheine attachment site 587 656 0.0011 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SMART SM00823 Phosphopantetheine attachment site 1640 1709 0.0045 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SMART SM00823 Phosphopantetheine attachment site 4251 4320 9.4E-4 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00501 AMP-binding enzyme 2192 2595 3.4E-91 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00501 AMP-binding enzyme 16 456 9.3E-89 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00501 AMP-binding enzyme 1134 1531 2.6E-102 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00501 AMP-binding enzyme 3719 4128 1.4E-84 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 2967 3216 7.45E-47 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 1731 1908 1.85E-52 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.559.10 3196 3452 3.3E-40 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3740 4152 8.2E-123 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2213 2619 8.8E-127 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1156 1555 1.9E-135 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF47336 4243 4317 1.26E-20 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3867 3878 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF47336 582 687 8.24E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:1.10.1200.10 4255 4329 7.7E-24 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:1.10.1200.10 2713 2774 1.1E-22 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:1.10.1200.10 1644 1710 1.3E-22 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 4136 4224 2.2E-8 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 1539 1616 2.4E-7 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF13193 AMP-binding enzyme C-terminal domain 2603 2683 2.1E-13 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF47336 1633 1705 1.57E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2336 2347 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 1127 1274 7.0E-44 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 3713 3871 9.8E-39 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 8 176 9.4E-36 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 1275 1432 8.5E-46 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF56801 3684 4264 2.09E-143 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:2.30.38.10 1440 1521 2.3E-23 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:2.30.38.10 2504 2585 5.0E-20 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF56801 1094 1653 1.7E-159 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3088 3240 1.2E-47 T 29-03-2018 IPR010060 Non-ribosomal peptide synthase AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 2184 2341 4.0E-49 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 3431 3682 1.45E-51 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 2342 2499 6.6E-34 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 3872 4031 2.5E-30 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.40.50.980 177 346 2.0E-36 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.559.10 2775 2973 2.3E-32 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 611 626 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 862 1104 1.78E-52 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF56801 2154 2722 1.18E-154 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:2.30.38.10 355 447 2.8E-19 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 1914 2157 6.56E-62 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:2.30.38.10 4034 4121 1.8E-18 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2733 2748 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.300.30 448 557 3.7E-14 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 2783 2981 1.11E-41 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 3253 3430 4.11E-47 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00550 Phosphopantetheine attachment site 4253 4316 8.6E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00550 Phosphopantetheine attachment site 1642 1704 4.7E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00550 Phosphopantetheine attachment site 2710 2771 2.5E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Pfam PF00550 Phosphopantetheine attachment site 589 651 2.9E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF52777 678 854 2.56E-50 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.559.10 1711 1917 2.0E-43 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.559.10 665 857 5.9E-44 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4275 4290 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.300.30 4123 4254 1.7E-38 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.300.30 1526 1643 6.3E-36 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 Gene3D G3DSA:3.30.300.30 2590 2712 1.3E-41 T 29-03-2018 AM474_RS31710 5b1677b450140bd1942922c5a53e15e0 4342 SUPERFAMILY SSF47336 2701 2771 4.32E-19 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 57 234 1.5E-47 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 PIRSF PIRSF000857 10 264 3.3E-81 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 18 260 36.625 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 Gene3D G3DSA:3.40.50.620 28 249 3.8E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 42 259 1.4E-50 T 29-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 63 258 1.4E-86 T 29-03-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 AM474_RS28010 535af7bc95747d3069521c6780080cbe 267 SUPERFAMILY SSF52402 32 222 1.87E-46 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.1E-13 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Pfam PF00009 Elongation factor Tu GTP binding domain 23 225 2.5E-44 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Pfam PF01583 Adenylylsulphate kinase 464 614 1.9E-52 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Gene3D G3DSA:3.40.50.300 461 633 1.8E-34 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 SUPERFAMILY SSF52540 17 234 1.23E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 SUPERFAMILY SSF50465 331 433 2.21E-33 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Gene3D G3DSA:3.40.50.300 1 235 2.1E-40 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 SUPERFAMILY SSF52540 463 629 2.87E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 1.5E-205 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Gene3D G3DSA:2.40.30.10 329 434 9.2E-25 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 2.4E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 SUPERFAMILY SSF50447 243 328 3.98E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 451 627 2.1E-41 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 460 55.186 T 29-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Gene3D G3DSA:2.40.30.10 236 327 1.7E-23 T 29-03-2018 AM474_RS21175 1d8b6aac41f02cdf784c8ed20f337b0a 633 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 463 631 32.386 T 29-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 Pfam PF00994 Probable molybdopterin binding domain 15 156 7.7E-31 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 SUPERFAMILY SSF53218 8 169 9.03E-45 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 7.6E-84 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 SMART SM00852 15 159 9.0E-28 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 Gene3D G3DSA:3.40.980.10 4 172 5.8E-32 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 2.1E-31 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09305 ea70ca8343109d60acf0c55614fb0dac 185 PIRSF PIRSF006443 1 167 2.7E-59 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AM474_RS12555 431109e7b0e0c5d76138274e4889e94d 356 Gene3D G3DSA:3.90.550.10 2 241 5.3E-5 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 265 310 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 SUPERFAMILY SSF51215 75 177 1.44E-6 T 29-03-2018 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 SMART SM00342 228 314 3.6E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 Pfam PF12833 Helix-turn-helix domain 234 316 2.1E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 Pfam PF14525 AraC-binding-like domain 25 192 6.3E-26 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 Gene3D G3DSA:1.10.10.60 202 261 3.7E-13 T 29-03-2018 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 Gene3D G3DSA:1.10.10.60 262 318 4.3E-9 T 29-03-2018 AM474_RS32255 f4144e10be78808fc8eb80150a48c48f 318 SUPERFAMILY SSF46689 215 262 6.45E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 SUPERFAMILY SSF53850 35 261 4.46E-52 T 29-03-2018 AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 SMART SM00062 32 248 0.0014 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 Gene3D G3DSA:3.40.190.10 137 319 2.1E-32 T 29-03-2018 AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 Pfam PF09084 NMT1/THI5 like 63 251 1.1E-25 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 Gene3D G3DSA:3.40.190.10 27 136 1.4E-9 T 29-03-2018 AM474_RS06645 a221073ad99760b7bbd288fa381298a4 334 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 313 1.1E-74 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 Gene3D G3DSA:3.40.50.720 1 187 1.8E-30 T 29-03-2018 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 Gene3D G3DSA:1.10.1040.10 188 315 1.5E-31 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 SUPERFAMILY SSF51735 7 162 7.16E-13 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 157 3.4E-38 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 188 310 7.8E-25 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 SUPERFAMILY SSF48179 188 311 2.58E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27990 327573540f5a41b82b665bfcecb91505 315 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 7 313 9.6E-85 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Gene3D G3DSA:1.10.8.60 375 582 1.2E-37 T 29-03-2018 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 325 337 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SUPERFAMILY SSF81923 12 133 1.41E-17 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SUPERFAMILY SSF52540 581 878 6.68E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Gene3D G3DSA:3.40.50.300 584 816 1.3E-35 T 29-03-2018 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 234 367 2.3E-9 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Gene3D G3DSA:3.40.50.300 188 373 1.7E-23 T 29-03-2018 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 4.6E-30 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 728 4.6E-30 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 743 757 4.6E-30 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 636 654 4.6E-30 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Pfam PF07724 AAA domain (Cdc48 subfamily) 631 797 3.4E-38 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 804 878 1.1E-12 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Gene3D G3DSA:1.10.1780.10 2 162 3.5E-21 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SMART SM01086 804 896 5.4E-11 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SMART SM00382 632 775 2.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SMART SM00382 229 370 4.8E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 SUPERFAMILY SSF52540 190 520 7.45E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 Gene3D G3DSA:1.10.8.60 817 902 1.5E-12 T 29-03-2018 AM474_RS14345 23fb52186a7226344a665f9eedaa0b0d 902 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 888 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM474_RS18120 4a89b07fdee1493d986a3208ad735e1a 373 SUPERFAMILY SSF53756 4 363 2.07E-60 T 29-03-2018 AM474_RS18120 4a89b07fdee1493d986a3208ad735e1a 373 Pfam PF00534 Glycosyl transferases group 1 184 348 1.9E-32 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS18120 4a89b07fdee1493d986a3208ad735e1a 373 Gene3D G3DSA:3.40.50.2000 154 368 1.7E-35 T 29-03-2018 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Gene3D G3DSA:3.40.50.300 4 151 6.0E-29 T 29-03-2018 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 SMART SM00382 46 163 4.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 SUPERFAMILY SSF48019 246 428 5.95E-75 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Gene3D G3DSA:1.10.8.60 152 236 1.6E-18 T 29-03-2018 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Pfam PF12002 MgsA AAA+ ATPase C terminal 262 428 1.3E-67 T 29-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Pfam PF16193 AAA C-terminal domain 184 261 3.7E-19 T 29-03-2018 IPR032423 AAA C-terminal domain AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 SUPERFAMILY SSF52540 8 231 2.95E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 142 1.3E-15 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Gene3D G3DSA:1.20.272.10 246 340 5.8E-37 T 29-03-2018 AM474_RS00905 9a013c4b8974e510b9505fc51c6ddfcd 442 Gene3D G3DSA:1.10.3710.10 342 442 9.4E-36 T 29-03-2018 AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00388 330 396 6.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00448 584 692 4.0E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS30230 139802b370bd450af4f02c11de665011 699 Gene3D G3DSA:1.10.287.130 322 392 1.4E-9 T 29-03-2018 AM474_RS30230 139802b370bd450af4f02c11de665011 699 Gene3D G3DSA:3.30.565.10 394 556 2.3E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 Gene3D G3DSA:3.30.450.20 184 321 8.4E-36 T 29-03-2018 AM474_RS30230 139802b370bd450af4f02c11de665011 699 SUPERFAMILY SSF55874 387 556 4.71E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 SUPERFAMILY SSF55785 176 303 2.97E-29 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00387 437 557 1.5E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 Pfam PF00512 His Kinase A (phospho-acceptor) domain 330 394 1.2E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS30230 139802b370bd450af4f02c11de665011 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 3.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS30230 139802b370bd450af4f02c11de665011 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 514 3.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS30230 139802b370bd450af4f02c11de665011 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 3.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS30230 139802b370bd450af4f02c11de665011 699 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 500 3.7E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS30230 139802b370bd450af4f02c11de665011 699 SUPERFAMILY SSF47384 315 393 5.1E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS30230 139802b370bd450af4f02c11de665011 699 Gene3D G3DSA:3.30.450.20 61 183 2.3E-21 T 29-03-2018 AM474_RS30230 139802b370bd450af4f02c11de665011 699 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 554 4.2E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 SUPERFAMILY SSF55785 77 189 1.54E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00091 64 133 14.0 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00091 192 261 4.3E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 Pfam PF00072 Response regulator receiver domain 586 669 1.2E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00086 266 308 6.3E-4 T 29-03-2018 IPR001610 PAC motif AM474_RS30230 139802b370bd450af4f02c11de665011 699 SMART SM00086 138 180 1.9 T 29-03-2018 IPR001610 PAC motif AM474_RS30230 139802b370bd450af4f02c11de665011 699 SUPERFAMILY SSF52172 584 696 1.08E-20 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS30230 139802b370bd450af4f02c11de665011 699 Pfam PF13426 PAS domain 80 179 2.7E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 Pfam PF13426 PAS domain 205 306 1.7E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 Gene3D G3DSA:3.40.50.2300 577 697 5.4E-19 T 29-03-2018 AM474_RS30230 139802b370bd450af4f02c11de665011 699 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 188 315 1.7E-25 T 29-03-2018 IPR000014 PAS domain AM474_RS30230 139802b370bd450af4f02c11de665011 699 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 187 1.1E-13 T 29-03-2018 IPR000014 PAS domain AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 Gene3D G3DSA:3.40.50.300 255 496 2.1E-22 T 29-03-2018 AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 Gene3D G3DSA:3.40.50.300 3 235 2.0E-54 T 29-03-2018 AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 SUPERFAMILY SSF52540 10 226 3.2E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 SUPERFAMILY SSF52540 259 487 2.26E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 Pfam PF00005 ABC transporter 280 436 5.8E-6 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 Pfam PF00005 ABC transporter 28 173 1.5E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 SMART SM00382 36 220 3.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14105 a4484cbee5c5d35e310e5794a9cfa8d1 523 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS17865 3752d0aca8ccb600b97e62ab0a2a004f 76 Gene3D G3DSA:1.10.260.40 9 75 1.8E-5 T 29-03-2018 AM474_RS17865 3752d0aca8ccb600b97e62ab0a2a004f 76 SUPERFAMILY SSF47413 15 70 3.41E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS17865 3752d0aca8ccb600b97e62ab0a2a004f 76 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 14 68 7.0E-26 T 29-03-2018 IPR026365 Phage-associated protein, BcepMu gp16 family AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Gene3D G3DSA:3.30.499.10 372 595 3.1E-64 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Pfam PF00330 Aconitase family (aconitate hydratase) 75 581 1.2E-182 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 ProSitePatterns PS00450 Aconitase family signature 1. 446 462 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Gene3D G3DSA:3.30.499.10 37 239 3.4E-76 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Pfam PF00694 Aconitase C-terminal domain 710 837 6.8E-50 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 SUPERFAMILY SSF52016 649 909 1.18E-90 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 ProSitePatterns PS01244 Aconitase family signature 2. 512 525 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Gene3D G3DSA:3.20.19.10 672 910 1.6E-97 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 Gene3D G3DSA:3.40.1060.10 240 371 1.3E-44 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 910 0.0 T 29-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 SUPERFAMILY SSF53732 5 645 7.98E-227 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 450 461 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 372 386 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 279 292 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 170 178 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 293 306 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 512 525 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 203 216 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 146 159 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS26970 e7f0910f1a3a33a884c0ded51ef4a471 910 PRINTS PR00415 Aconitase family signature 217 232 7.7E-42 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 Pfam PF00106 short chain dehydrogenase 8 192 2.7E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 SUPERFAMILY SSF51735 2 232 2.32E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.7E-28 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.2E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 Gene3D G3DSA:3.40.50.720 157 233 4.6E-20 T 29-03-2018 AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0042 T 29-03-2018 AM474_RS00360 89c96d6d5a43089d9f8f566200718a49 233 Gene3D G3DSA:3.40.50.720 4 156 9.8E-36 T 29-03-2018 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 Gene3D G3DSA:1.10.10.60 267 304 8.1E-15 T 29-03-2018 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 Gene3D G3DSA:2.60.120.280 36 214 5.8E-20 T 29-03-2018 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 293 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 Gene3D G3DSA:3.90.1240.10 215 266 7.6E-15 T 29-03-2018 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 SUPERFAMILY SSF51215 36 187 3.53E-32 T 29-03-2018 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 SUPERFAMILY SSF46689 251 301 1.93E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 SUPERFAMILY SSF46689 203 246 1.16E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 SMART SM00342 214 297 8.7E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 Pfam PF12833 Helix-turn-helix domain 220 299 1.1E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS07190 cbe9dd687a60d0c71ff4b9616691dcfb 307 Pfam PF02311 AraC-like ligand binding domain 47 184 4.0E-28 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 2.0E-84 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.1E-231 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.022 T 29-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 PIRSF PIRSF000429 2 391 3.2E-132 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.1E-47 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 Gene3D G3DSA:3.40.47.10 5 261 1.0E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 1.6E-134 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 SUPERFAMILY SSF53901 4 262 1.28E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 Gene3D G3DSA:3.40.47.10 262 388 1.9E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04275 ab144fd299270fed183a0709efe10f49 391 SUPERFAMILY SSF53901 266 390 2.71E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 SUPERFAMILY SSF47203 246 381 8.7E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 86 2.3E-4 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 216 4.3E-9 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Gene3D G3DSA:1.20.140.10 216 383 5.6E-18 T 29-03-2018 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 366 1.5E-8 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Gene3D G3DSA:1.10.540.10 9 96 1.1E-9 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 SUPERFAMILY SSF56645 18 225 8.64E-42 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 Gene3D G3DSA:2.40.110.10 123 215 1.4E-20 T 29-03-2018 AM474_RS00820 1bf9de67b49cdafd0f5a10ee039d9445 383 PIRSF PIRSF016578 3 383 2.6E-29 T 29-03-2018 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 SMART SM01016 3 91 3.8E-38 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Gene3D G3DSA:1.10.730.10 453 587 3.4E-40 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 9.2E-25 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 5.7E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 5.7E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 5.7E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 5.7E-26 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 SUPERFAMILY SSF52374 114 464 3.87E-88 T 29-03-2018 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Pfam PF00750 tRNA synthetases class I (R) 101 457 1.8E-125 T 29-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Gene3D G3DSA:3.30.1360.70 1 110 1.8E-29 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Pfam PF05746 DALR anticodon binding domain 471 587 1.8E-31 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 SMART SM00836 471 587 8.8E-36 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 587 26.618 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 587 1.9E-166 T 29-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 SUPERFAMILY SSF47323 465 587 3.53E-33 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 Gene3D G3DSA:3.40.50.620 111 452 1.0E-54 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS17625 9f4714ca01fd39e6506894cd3b1f06a3 587 SUPERFAMILY SSF55190 1 103 9.16E-24 T 29-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 SUPERFAMILY SSF53155 191 274 9.22E-10 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 272 350 4.1E-33 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 272 351 1.1E-29 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Gene3D G3DSA:3.30.160.70 193 266 8.3E-10 T 29-03-2018 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 SUPERFAMILY SSF57884 9 87 5.89E-31 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Gene3D G3DSA:1.10.10.60 89 138 1.1E-7 T 29-03-2018 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 PIRSF PIRSF000409 1 357 5.6E-148 T 29-03-2018 IPR016221 Bifunctional regulatory protein Ada AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Gene3D G3DSA:1.10.10.60 139 192 3.4E-4 T 29-03-2018 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 SMART SM00342 103 184 1.2E-6 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Gene3D G3DSA:1.10.10.10 267 352 1.7E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Gene3D G3DSA:3.40.10.10 11 81 3.9E-22 T 29-03-2018 IPR035451 Ada-like domain AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Pfam PF02805 Metal binding domain of Ada 16 78 3.8E-27 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 321 327 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 SUPERFAMILY SSF46767 271 351 1.44E-29 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS07335 853280b57be62b5f6ff7d3c055b8a556 357 Pfam PF12833 Helix-turn-helix domain 110 186 1.4E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 307 443 3.2E-53 T 29-03-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 Gene3D G3DSA:3.30.1330.60 203 449 1.5E-34 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 66 275 1.2E-72 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 SUPERFAMILY SSF103088 328 443 7.98E-29 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 Pfam PF00691 OmpA family 339 437 2.0E-15 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS14405 3a3b779c6bd1f19721562598e2240fcb 449 Pfam PF09850 Type VI secretion system protein DotU 67 269 7.8E-69 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 SUPERFAMILY SSF52743 38 396 5.24E-49 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 334 344 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 SUPERFAMILY SSF103515 672 974 2.22E-40 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 Pfam PF00082 Subtilase family 57 384 1.0E-38 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 Gene3D G3DSA:3.40.50.200 28 397 2.7E-50 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 PRINTS PR00723 Subtilisin serine protease family (S8) signature 333 349 4.8E-11 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 PRINTS PR00723 Subtilisin serine protease family (S8) signature 114 127 4.8E-11 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 PRINTS PR00723 Subtilisin serine protease family (S8) signature 57 76 4.8E-11 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 SMART SM00869 705 964 2.8E-26 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 Gene3D G3DSA:2.40.128.130 665 974 9.5E-31 T 29-03-2018 AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 663 924 1.4E-7 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM474_RS04595 9a00ffc06e24b443dafdd53ea664c2fb 974 Pfam PF03797 Autotransporter beta-domain 708 943 6.9E-31 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS11215 82b085c3289986888f34905f67156a75 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 29-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11215 82b085c3289986888f34905f67156a75 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.953 T 29-03-2018 IPR022973 Ribosomal protein L10 AM474_RS11215 82b085c3289986888f34905f67156a75 166 SUPERFAMILY SSF160369 4 160 2.35E-49 T 29-03-2018 AM474_RS11215 82b085c3289986888f34905f67156a75 166 Pfam PF00466 Ribosomal protein L10 6 101 2.6E-26 T 29-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM474_RS11215 82b085c3289986888f34905f67156a75 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 75 154 1.0E-5 T 29-03-2018 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 Gene3D G3DSA:3.30.1020.10 153 183 3.8E-10 T 29-03-2018 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 PIRSF PIRSF000239 1 187 4.7E-45 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 SUPERFAMILY SSF52833 1 186 1.15E-51 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.3E-7 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 Pfam PF00578 AhpC/TSA family 4 132 4.5E-30 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 Gene3D G3DSA:3.40.30.10 4 152 2.7E-30 T 29-03-2018 AM474_RS14085 e385d4640b0ebdaae40a0a618361f0a0 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.8E-95 T 29-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS16155 43c52eadd3cb5144e8fb035d3e145056 213 SUPERFAMILY SSF53271 1 211 3.98E-50 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS16155 43c52eadd3cb5144e8fb035d3e145056 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.028 T 29-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS16155 43c52eadd3cb5144e8fb035d3e145056 213 Pfam PF00156 Phosphoribosyl transferase domain 44 159 6.6E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS16155 43c52eadd3cb5144e8fb035d3e145056 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 6.3E-62 T 29-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS16155 43c52eadd3cb5144e8fb035d3e145056 213 Gene3D G3DSA:3.40.50.2020 1 193 2.5E-48 T 29-03-2018 AM474_RS31430 6cb1475cc9ddbc493f01618ecfc77c8d 141 Gene3D G3DSA:3.10.450.40 9 131 5.3E-18 T 29-03-2018 AM474_RS31430 6cb1475cc9ddbc493f01618ecfc77c8d 141 SUPERFAMILY SSF160719 27 129 3.4E-14 T 29-03-2018 AM474_RS31430 6cb1475cc9ddbc493f01618ecfc77c8d 141 Pfam PF04965 Gene 25-like lysozyme 26 115 4.9E-18 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM474_RS31430 6cb1475cc9ddbc493f01618ecfc77c8d 141 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 6 124 1.2E-25 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 11 139 4.4E-37 T 29-03-2018 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Pfam PF00342 Phosphoglucose isomerase 55 545 5.7E-194 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 263 516 7.0E-110 T 29-03-2018 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:1.10.1390.10 517 554 4.0E-15 T 29-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Gene3D G3DSA:3.40.50.10490 140 262 4.0E-43 T 29-03-2018 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 29-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.844 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 2.6E-51 T 29-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19590 5daab83886895ecd19799ba58766423c 554 SUPERFAMILY SSF53697 9 551 2.63E-208 T 29-03-2018 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 174 3.0E-37 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 SUPERFAMILY SSF55200 90 177 8.24E-33 T 29-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 SUPERFAMILY SSF54364 11 84 3.27E-27 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 Gene3D G3DSA:3.10.20.80 8 84 8.1E-30 T 29-03-2018 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 176 29.764 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 13 176 3.1E-65 T 29-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 79 7.8E-30 T 29-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM474_RS01635 1578d73ecd7c84ba980d5f57db411d21 177 Gene3D G3DSA:3.30.110.10 85 177 5.6E-35 T 29-03-2018 AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 SMART SM00382 32 221 5.3E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 SMART SM00382 281 476 4.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 SUPERFAMILY SSF52540 271 488 5.13E-41 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 Gene3D G3DSA:3.40.50.300 257 503 3.0E-34 T 29-03-2018 AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 Gene3D G3DSA:3.40.50.300 5 237 1.1E-46 T 29-03-2018 AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 SUPERFAMILY SSF52540 7 231 1.81E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 Pfam PF00005 ABC transporter 273 428 2.1E-17 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS29045 12a7703554af63f62fc2e3309ffa2256 510 Pfam PF00005 ABC transporter 24 173 2.8E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03745 404d63a26333d9f91dbace2a60d7de50 257 Pfam PF00005 ABC transporter 20 169 2.6E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03745 404d63a26333d9f91dbace2a60d7de50 257 SMART SM00382 29 213 1.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS03745 404d63a26333d9f91dbace2a60d7de50 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS03745 404d63a26333d9f91dbace2a60d7de50 257 SUPERFAMILY SSF52540 11 227 4.2E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03745 404d63a26333d9f91dbace2a60d7de50 257 Gene3D G3DSA:3.40.50.300 2 229 5.2E-62 T 29-03-2018 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.90.1150.10 1 181 1.6E-44 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.90.1150.10 305 427 8.1E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 Pfam PF00202 Aminotransferase class-III 32 394 8.0E-77 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 4.0E-192 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.701 T 29-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 Gene3D G3DSA:3.40.640.10 182 304 2.2E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS09760 8f5a4b53820691c6984dee37afd8901b 427 SUPERFAMILY SSF53383 2 424 8.21E-135 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS13840 9b952d1ae9cd908482fb294de9f89df6 357 Gene3D G3DSA:3.40.190.10 150 340 1.3E-26 T 29-03-2018 AM474_RS13840 9b952d1ae9cd908482fb294de9f89df6 357 Pfam PF09084 NMT1/THI5 like 68 260 2.2E-19 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS13840 9b952d1ae9cd908482fb294de9f89df6 357 Gene3D G3DSA:3.40.190.10 30 149 6.6E-12 T 29-03-2018 AM474_RS13840 9b952d1ae9cd908482fb294de9f89df6 357 SUPERFAMILY SSF53850 32 274 1.41E-39 T 29-03-2018 AM474_RS23205 fa9b8186011d8703acefd188d493bd6d 61 Pfam PF02599 Global regulator protein family 1 53 9.1E-27 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS23205 fa9b8186011d8703acefd188d493bd6d 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS23205 fa9b8186011d8703acefd188d493bd6d 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.924 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS23205 fa9b8186011d8703acefd188d493bd6d 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.6E-30 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS23205 fa9b8186011d8703acefd188d493bd6d 61 SUPERFAMILY SSF117130 1 54 5.49E-21 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.9E-43 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 Gene3D G3DSA:3.30.70.120 1 109 3.5E-48 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 SMART SM00938 4 105 4.6E-66 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 PIRSF PIRSF039144 1 112 4.8E-55 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 29-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 SUPERFAMILY SSF54913 1 112 6.35E-45 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 29-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 23 41 1.5E-43 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 83 103 1.5E-43 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 2 17 1.5E-43 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS16370 83db47bc8df9010c24883e7f9c6e6061 112 PRINTS PR00340 P-II protein signature 52 75 1.5E-43 T 29-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100934 507 603 1.01E-23 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:1.20.1270.10 532 619 3.2E-21 T 29-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.2E-290 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 193 276 1.7E-22 T 29-03-2018 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.888 T 29-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 1 192 7.8E-82 T 29-03-2018 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 4 183 8.85E-66 T 29-03-2018 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Pfam PF00012 Hsp70 protein 4 603 7.2E-265 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:2.60.34.10 390 531 2.6E-65 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 29-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.0E-81 T 29-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF53067 187 382 2.07E-69 T 29-03-2018 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 Gene3D G3DSA:3.30.420.40 277 362 1.9E-22 T 29-03-2018 AM474_RS19430 834816034bd2f88d8d86082145d2379a 637 SUPERFAMILY SSF100920 384 539 3.66E-60 T 29-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 Pfam PF13602 Zinc-binding dehydrogenase 184 324 1.5E-25 T 29-03-2018 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 SUPERFAMILY SSF50129 1 140 6.7E-39 T 29-03-2018 IPR011032 GroES-like AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 SMART SM00829 10 324 4.1E-56 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 8.6E-144 T 29-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 Gene3D G3DSA:3.40.50.720 133 310 2.6E-36 T 29-03-2018 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 Gene3D G3DSA:3.90.180.10 1 132 6.6E-40 T 29-03-2018 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.1E-9 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS24610 6a197bb3401199abeea79cd3809c8a2e 328 SUPERFAMILY SSF51735 111 288 4.12E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:1.10.287.130 371 437 2.9E-13 T 29-03-2018 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF158472 195 245 3.79E-8 T 29-03-2018 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF55874 432 595 2.75E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:3.30.450.20 237 370 1.0E-18 T 29-03-2018 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 443 1.2E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00387 489 595 7.3E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 540 5.1E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 5.1E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 5.1E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 5.1E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00388 375 443 1.1E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF47384 360 443 1.22E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF00672 HAMP domain 195 244 2.7E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB 42 158 6.5E-37 T 29-03-2018 IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 373 9.9E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00304 195 247 4.1E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Gene3D G3DSA:3.30.565.10 438 595 8.5E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF08448 PAS fold 264 370 8.9E-11 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SUPERFAMILY SSF55785 246 367 1.68E-13 T 29-03-2018 IPR000014 PAS domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 594 1.1E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15325 d5c8866cb239094f98c6077dc1cd03c8 595 SMART SM00091 258 323 1.2E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Pfam PF08676 MutL C terminal dimerisation domain 442 589 2.0E-51 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 SUPERFAMILY SSF55874 5 206 2.49E-54 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 126 7.1E-9 T 29-03-2018 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 5 629 29.842 T 29-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Gene3D G3DSA:3.30.230.10 221 333 4.7E-31 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Gene3D G3DSA:3.30.565.10 9 202 1.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 314 3.3E-100 T 29-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 SMART SM01340 216 334 8.4E-63 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 SUPERFAMILY SSF118116 442 631 2.62E-62 T 29-03-2018 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 SUPERFAMILY SSF54211 195 334 8.34E-41 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 SMART SM00853 446 589 4.9E-57 T 29-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 29-03-2018 IPR014762 DNA mismatch repair, conserved site AM474_RS18450 2d8809b2dcd5efc0ef9c50236231a72e 633 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 218 333 1.4E-40 T 29-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 Gene3D G3DSA:3.30.1120.10 373 453 7.7E-12 T 29-03-2018 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 4 501 1.5E-265 T 29-03-2018 IPR017785 Choline-sulfatase AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 Gene3D G3DSA:3.40.720.10 1 372 3.2E-76 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 Pfam PF00884 Sulfatase 5 347 3.1E-52 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 Pfam PF12411 Choline sulfatase enzyme C terminal 449 500 1.4E-24 T 29-03-2018 IPR025863 Choline sulfatase enzyme C-terminal domain AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 SUPERFAMILY SSF53649 2 211 2.91E-114 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 SUPERFAMILY SSF53649 254 478 2.91E-114 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS14705 19ea9e651f03ff00d99aea8d8ad2d51a 503 ProSitePatterns PS00149 Sulfatases signature 2. 94 104 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM474_RS11895 db8cc7851332c8eabf2ba1cab8fff905 218 SUPERFAMILY SSF54427 76 205 2.42E-31 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS11895 db8cc7851332c8eabf2ba1cab8fff905 218 Pfam PF13474 SnoaL-like domain 85 206 1.5E-18 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS11895 db8cc7851332c8eabf2ba1cab8fff905 218 Gene3D G3DSA:3.10.450.50 72 218 3.7E-25 T 29-03-2018 AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 SUPERFAMILY SSF54523 35 140 2.25E-26 T 29-03-2018 AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.7E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 Gene3D G3DSA:3.30.700.10 22 139 5.5E-17 T 29-03-2018 AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 Pfam PF08334 Type II secretion system (T2SS), protein G 31 139 5.4E-33 T 29-03-2018 IPR013545 Type II secretion system protein G AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 3.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.5E-11 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.5E-11 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS01225 00e45f16d85c9cef98c7f36e66b4759b 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 141 1.1E-57 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM474_RS05540 9f07b24f4fb8098fd874ad1717912554 279 SUPERFAMILY SSF161098 7 275 8.11E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05540 9f07b24f4fb8098fd874ad1717912554 279 Gene3D G3DSA:1.10.3720.10 9 279 3.0E-34 T 29-03-2018 AM474_RS05540 9f07b24f4fb8098fd874ad1717912554 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 270 5.2E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 402 4.5E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF00672 HAMP domain 185 234 3.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF08448 PAS fold 294 397 6.8E-9 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00304 185 238 1.4E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 1.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 1.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 1.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 1.9E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF00512 His Kinase A (phospho-acceptor) domain 413 499 1.3E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:1.10.287.130 406 498 4.2E-12 T 29-03-2018 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF55874 506 665 1.7E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:3.30.565.10 500 668 2.4E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00388 412 502 2.6E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00091 287 352 3.8E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF47384 408 502 2.55E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SMART SM00387 550 667 2.5E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF158472 185 234 3.27E-7 T 29-03-2018 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 666 1.4E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 Gene3D G3DSA:3.30.450.20 272 405 1.6E-15 T 29-03-2018 AM474_RS21405 af7f6f3cb1640d9b7d264873b0912800 698 SUPERFAMILY SSF55785 275 395 4.54E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 6.9E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 6.9E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 6.9E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PIRSF PIRSF006431 1 315 1.5E-135 T 29-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 SUPERFAMILY SSF53474 4 296 8.24E-65 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Pfam PF00561 alpha/beta hydrolase fold 36 296 2.1E-37 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 2.5E-13 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 2.5E-13 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 2.5E-13 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 4.6E-131 T 29-03-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AM474_RS17470 088d45bf8ccbbdb2fac286bfbc8f9cae 323 Gene3D G3DSA:3.40.50.1820 2 311 2.2E-67 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12630 ccfd7e1a6f7079e8b18f7ab3995a15a7 168 Gene3D G3DSA:2.40.50.180 42 125 1.4E-4 T 29-03-2018 AM474_RS12630 ccfd7e1a6f7079e8b18f7ab3995a15a7 168 Pfam PF01584 CheW-like domain 26 158 2.1E-10 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12630 ccfd7e1a6f7079e8b18f7ab3995a15a7 168 SUPERFAMILY SSF50341 20 158 1.96E-9 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12630 ccfd7e1a6f7079e8b18f7ab3995a15a7 168 SMART SM00260 21 159 1.5E-15 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 4.8E-25 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 2.9E-61 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF51735 314 496 1.76E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 29-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 212 8.4E-40 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.229 T 29-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.40.50.720 308 498 1.1E-46 T 29-03-2018 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF52096 2 308 8.83E-70 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:3.90.226.10 1 307 7.9E-67 T 29-03-2018 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 622 714 6.29E-24 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 SUPERFAMILY SSF48179 496 616 3.57E-29 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:1.10.1040.10 499 597 3.0E-22 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS04280 55fe83262017e2e23c660dbe95aef357 715 Gene3D G3DSA:1.10.1040.10 622 713 4.5E-15 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 TIGRFAM TIGR00016 ackA: acetate kinase 3 392 3.5E-133 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 Pfam PF00871 Acetokinase family 6 386 4.3E-133 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 6 17 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 374 386 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 200 221 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 170 183 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 319 335 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PRINTS PR00471 Acetate kinase family signature 297 310 6.4E-43 T 29-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 SUPERFAMILY SSF53067 5 192 3.88E-65 T 29-03-2018 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 SUPERFAMILY SSF53067 153 393 1.11E-82 T 29-03-2018 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 169.75 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 Gene3D G3DSA:3.30.420.40 194 394 3.1E-70 T 29-03-2018 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 PIRSF PIRSF000722 2 394 4.3E-131 T 29-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 Gene3D G3DSA:3.30.420.40 5 191 1.1E-69 T 29-03-2018 AM474_RS22840 c68a873200581f9a87181c2a06f48999 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 29-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 AM474_RS25240 b3ab20c2d6e1881e949364e69a7ba176 380 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 4 336 1.1E-121 T 29-03-2018 IPR010148 CRISPR-associated protein, CT1975 AM474_RS25240 b3ab20c2d6e1881e949364e69a7ba176 380 Pfam PF09344 CT1975-like protein 5 354 8.3E-125 T 29-03-2018 IPR010148 CRISPR-associated protein, CT1975 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.40.50.880 5 220 3.0E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.30.300.10 401 525 1.7E-51 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 204 7.2E-77 T 29-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF02540 NAD synthase 219 291 3.3E-8 T 29-03-2018 IPR022310 NAD/GMP synthase AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.92 T 29-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 5.1E-7 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 5.1E-7 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 5.1E-7 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF52317 8 237 1.08E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 5.2E-36 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 3.3E-149 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Pfam PF00958 GMP synthase C terminal domain 433 524 9.1E-41 T 29-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 Gene3D G3DSA:3.40.50.620 221 400 1.9E-35 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF54810 405 525 3.4E-49 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 SUPERFAMILY SSF52402 197 420 9.7E-59 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.5E-5 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.5E-5 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.5E-5 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 8.8E-5 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 8.8E-5 T 29-03-2018 AM474_RS08540 0b835cbb9d133cf46ad9db9287652b9b 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 8.8E-5 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 8.9E-58 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.40.50.300 68 186 1.8E-31 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 398 512 1.82E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.30.10 187 293 5.3E-21 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.870 302 400 1.2E-33 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF00679 Elongation factor G C-terminus 397 477 1.5E-21 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF54980 302 387 3.2E-15 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.7E-286 T 29-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.40.50.300 2 67 5.4E-11 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 9.6E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF50447 151 299 1.79E-31 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:3.30.70.240 401 482 1.0E-17 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 1.1E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 SUPERFAMILY SSF52540 3 219 3.85E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 Gene3D G3DSA:2.40.50.250 483 573 1.2E-35 T 29-03-2018 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS17285 b02d05907a991cc2e7dab4889effe0b5 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.1E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 2.6E-82 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 SUPERFAMILY SSF56219 1 269 5.1E-83 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 262 4.9E-17 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 Gene3D G3DSA:3.60.10.10 1 270 5.2E-49 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS00015 8c4d6f97232bf0386bc98681ccd93952 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 269 2.7E-94 T 29-03-2018 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 SUPERFAMILY SSF53720 13 472 2.23E-119 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 Pfam PF00171 Aldehyde dehydrogenase family 17 445 5.9E-88 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 PIRSF PIRSF036492 6 476 2.0E-168 T 29-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 Gene3D G3DSA:3.40.605.10 5 240 4.7E-60 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 Gene3D G3DSA:3.40.309.10 241 426 1.6E-56 T 29-03-2018 AM474_RS12885 b734b6225dcdeea40306f9e2aa4654b3 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS04985 1326b7bcf0b785385cfe47b98cde4245 376 SUPERFAMILY SSF53756 3 373 7.53E-112 T 29-03-2018 AM474_RS04985 1326b7bcf0b785385cfe47b98cde4245 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 361 1.4E-93 T 29-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 AM474_RS04985 1326b7bcf0b785385cfe47b98cde4245 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 364 7.9E-69 T 29-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AM474_RS04985 1326b7bcf0b785385cfe47b98cde4245 376 Gene3D G3DSA:3.40.50.2000 1 214 8.5E-68 T 29-03-2018 AM474_RS04985 1326b7bcf0b785385cfe47b98cde4245 376 Gene3D G3DSA:3.40.50.2000 283 376 1.2E-21 T 29-03-2018 AM474_RS14285 81bac4bb29aa12ff24b319157fed2eef 410 Pfam PF13646 HEAT repeats 149 217 1.7E-7 T 29-03-2018 AM474_RS14285 81bac4bb29aa12ff24b319157fed2eef 410 Gene3D G3DSA:1.25.10.10 35 407 2.8E-9 T 29-03-2018 IPR011989 Armadillo-like helical AM474_RS14285 81bac4bb29aa12ff24b319157fed2eef 410 SUPERFAMILY SSF48371 97 311 8.83E-11 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 AM474_RS14285 81bac4bb29aa12ff24b319157fed2eef 410 TIGRFAM TIGR02270 TIGR02270: conserved hypothetical protein 3 408 1.8E-171 T 29-03-2018 IPR011959 Conserved hypothetical protein CHP02270 AM474_RS22110 8ffc23993a70229885ebdedaafba3f39 403 SUPERFAMILY SSF53067 18 144 4.4E-9 T 29-03-2018 AM474_RS22110 8ffc23993a70229885ebdedaafba3f39 403 Pfam PF05134 Type II secretion system (T2SS), protein L 36 169 5.4E-7 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AM474_RS22110 8ffc23993a70229885ebdedaafba3f39 403 Pfam PF12693 GspL periplasmic domain 229 402 5.9E-44 T 29-03-2018 IPR025691 GspL periplasmic domain AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 PIRSF PIRSF000429 1 401 1.6E-113 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 1 269 1.4E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.1E-130 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 Pfam PF00108 Thiolase, N-terminal domain 5 270 1.6E-46 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 2.6E-47 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 Gene3D G3DSA:3.40.47.10 270 397 2.5E-31 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 SUPERFAMILY SSF53901 280 400 5.07E-44 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27905 0c26ea812f807103b7c1b8963392e9cf 401 SUPERFAMILY SSF53901 3 278 3.84E-62 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 128 401 1.94E-109 T 29-03-2018 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF48108 396 554 6.28E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 4 110 3.0E-38 T 29-03-2018 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52335 938 1069 1.01E-39 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 8.7E-41 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02142 MGS-like domain 958 1041 2.2E-19 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.1490.20 655 743 1.5E-24 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.1380 927 1054 3.0E-35 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 557 675 2.3E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM01096 424 547 6.4E-75 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SMART SM00851 955 1041 2.7E-32 T 29-03-2018 IPR011607 Methylglyoxal synthase-like domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:1.10.1030.10 404 538 4.7E-53 T 29-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF52440 1 127 2.01E-49 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.0E-66 T 29-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.126 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.40.50.20 539 654 3.0E-62 T 29-03-2018 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.0E-32 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.4E-72 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.405 T 29-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 744 926 5.5E-42 T 29-03-2018 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 SUPERFAMILY SSF56059 673 933 6.72E-102 T 29-03-2018 AM474_RS19455 751e582429bae175bf7d3bb7ae37359c 1073 Gene3D G3DSA:3.30.470.20 119 403 2.4E-66 T 29-03-2018 AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 PIRSF PIRSF016516 1 331 1.4E-151 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 SUPERFAMILY SSF49785 5 168 6.38E-62 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 TIGRFAM TIGR02961 allantoicase: allantoicase 11 327 1.1E-141 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 Gene3D G3DSA:2.60.120.260 1 168 1.2E-64 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 Gene3D G3DSA:2.60.120.260 169 332 5.5E-62 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 Hamap MF_00813 Probable allantoicase [alc]. 1 330 47.758 T 29-03-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 SUPERFAMILY SSF49785 177 329 5.95E-56 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 Pfam PF03561 Allantoicase repeat 187 327 1.2E-47 T 29-03-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AM474_RS26695 e6f142d6a5d40eeb39b49533b9f47373 332 Pfam PF03561 Allantoicase repeat 20 164 1.3E-46 T 29-03-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 Gene3D G3DSA:1.10.10.730 125 170 3.1E-9 T 29-03-2018 AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 Pfam PF02195 ParB-like nuclease domain 29 123 5.4E-11 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 Gene3D G3DSA:1.10.287.1060 314 399 7.0E-4 T 29-03-2018 AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 SUPERFAMILY SSF110849 26 160 6.98E-13 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 SUPERFAMILY SSF109709 118 221 1.12E-18 T 29-03-2018 AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 Gene3D G3DSA:3.90.1530.10 15 124 2.3E-19 T 29-03-2018 AM474_RS08475 790c169c9d826f0927b1bbcb294420b1 681 SMART SM00470 27 124 2.8E-14 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.1E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF48498 77 191 5.56E-36 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 52 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 SUPERFAMILY SSF46689 3 80 5.13E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 52 6.0E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28460 aaf89f0d42765cf83011c9ed8a671ba2 193 Gene3D G3DSA:1.10.357.10 2 193 2.1E-36 T 29-03-2018 AM474_RS28795 53e24ee42c0ab2d90f2ad203f32bbebd 162 Gene3D G3DSA:3.10.450.50 12 152 2.7E-16 T 29-03-2018 AM474_RS28795 53e24ee42c0ab2d90f2ad203f32bbebd 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 3.0E-88 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS28795 53e24ee42c0ab2d90f2ad203f32bbebd 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 15 162 4.0E-84 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS28795 53e24ee42c0ab2d90f2ad203f32bbebd 162 SUPERFAMILY SSF54427 20 149 8.78E-25 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-10 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 SMART SM00422 1 70 3.8E-34 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 SUPERFAMILY SSF46955 1 126 5.86E-40 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 Pfam PF09278 MerR, DNA binding 44 108 1.0E-20 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.2E-51 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 Pfam PF00376 MerR family regulatory protein 2 39 2.1E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 Gene3D G3DSA:1.10.1660.10 1 55 3.3E-23 T 29-03-2018 AM474_RS08325 6ce630bd32b09e8dbd775354495dd230 159 Gene3D G3DSA:1.10.1660.10 56 136 1.1E-22 T 29-03-2018 AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 Gene3D G3DSA:2.40.160.50 173 562 1.1E-47 T 29-03-2018 AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 PIRSF PIRSF029745 2 562 1.1E-151 T 29-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 Pfam PF08479 POTRA domain, ShlB-type 71 146 5.1E-27 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 Pfam PF17287 POTRA domain 158 200 4.1E-15 T 29-03-2018 IPR035251 ShlB, POTRA domain AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 Gene3D G3DSA:3.10.20.310 74 146 2.1E-18 T 29-03-2018 AM474_RS14655 2cae9fa13f64359121c2e8bd29b50af7 562 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 205 525 7.8E-98 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1800.10 1282 1324 7.7E-12 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1356 4.3E-27 T 29-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1110.10 152 436 7.3E-68 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 1056 1357 0.0 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 11 230 0.0 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 SUPERFAMILY SSF64484 348 944 0.0 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 437 650 2.2E-78 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:3.90.1100.10 651 718 5.0E-16 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.150 834 1062 1.1E-53 T 29-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.349 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.270.10 1063 1257 1.1E-79 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1354 0.0 T 29-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Gene3D G3DSA:2.40.50.100 720 800 4.3E-29 T 29-03-2018 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 4.6E-31 T 29-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 2.3E-160 T 29-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 4.7E-20 T 29-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 359 459 1.1E-14 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 227 1.8E-8 T 29-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 29-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11205 4b1d9d32e58419a1063dd0b59e1e3bf6 1357 Pfam PF04563 RNA polymerase beta subunit 26 504 6.3E-41 T 29-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 52 158 1.9E-11 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 Gene3D G3DSA:3.40.50.300 294 575 1.2E-60 T 29-03-2018 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 SUPERFAMILY SSF52540 177 573 3.02E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 SUPERFAMILY SSF160246 15 157 3.92E-20 T 29-03-2018 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 Pfam PF00437 Type II/IV secretion system protein 195 460 1.1E-80 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 SMART SM00382 321 442 1.2E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01235 7c550ef4db46bf24b3b9df6bb3847378 575 Gene3D G3DSA:3.30.450.90 158 293 3.8E-43 T 29-03-2018 AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Pfam PF00270 DEAD/DEAH box helicase 42 204 6.5E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Pfam PF00271 Helicase conserved C-terminal domain 247 351 4.3E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Pfam PF03880 DbpA RNA binding domain 494 562 4.8E-19 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Gene3D G3DSA:3.40.50.300 23 232 2.4E-56 T 29-03-2018 AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 SMART SM00490 270 351 7.1E-33 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 165 173 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 SUPERFAMILY SSF52540 85 372 4.03E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 12 564 41.659 T 29-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 Gene3D G3DSA:3.40.50.300 233 384 1.1E-40 T 29-03-2018 AM474_RS03380 2b8ad467b9493bdcf8c274b20aa89750 567 SMART SM00487 36 234 1.2E-57 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS00445 f2046ef3eca7d2f4560fc2f69bde1580 306 SUPERFAMILY SSF54593 1 263 1.98E-27 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00445 f2046ef3eca7d2f4560fc2f69bde1580 306 Gene3D G3DSA:3.10.180.10 1 132 1.6E-10 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00445 f2046ef3eca7d2f4560fc2f69bde1580 306 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 261 6.0E-7 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS00445 f2046ef3eca7d2f4560fc2f69bde1580 306 Gene3D G3DSA:3.10.180.10 136 287 4.1E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 Pfam PF00916 Sulfate permease family 13 141 2.2E-27 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 Pfam PF00916 Sulfate permease family 168 346 1.7E-28 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 29-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 SUPERFAMILY SSF52091 400 485 2.55E-10 T 29-03-2018 IPR002645 STAS domain AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 Gene3D G3DSA:3.30.750.24 390 484 1.2E-12 T 29-03-2018 IPR002645 STAS domain AM474_RS00115 8d195c3671ce624ca4d5bc735c31f524 495 Pfam PF01740 STAS domain 405 485 1.9E-6 T 29-03-2018 IPR002645 STAS domain AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 SMART SM00448 19 133 3.6E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 Pfam PF00072 Response regulator receiver domain 21 133 3.6E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 Gene3D G3DSA:3.40.50.2300 17 169 2.4E-28 T 29-03-2018 AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 SUPERFAMILY SSF52172 19 151 1.01E-29 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 335 6.4E-52 T 29-03-2018 IPR000160 GGDEF domain AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 SUPERFAMILY SSF55073 176 336 4.94E-49 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 Gene3D G3DSA:3.30.70.270 170 342 4.0E-54 T 29-03-2018 AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 SMART SM00267 160 337 6.6E-61 T 29-03-2018 IPR000160 GGDEF domain AM474_RS07870 087760568c818690e0aae6f6ab5689f0 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 172 333 7.0E-50 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 PIRSF PIRSF001434 1 424 4.7E-135 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 421 1.7E-207 T 29-03-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 SUPERFAMILY SSF53383 1 421 7.24E-134 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 Gene3D G3DSA:3.40.640.10 1 287 2.7E-66 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 7.3E-144 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS18030 6587ebd666144d43c11ea86f2c79eff4 425 Gene3D G3DSA:3.90.1150.10 289 425 1.4E-50 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 SUPERFAMILY SSF109604 153 353 6.28E-26 T 29-03-2018 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 SUPERFAMILY SSF52172 13 160 1.2E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS19320 c60d351781adce1fc148918154b00d56 393 SMART SM00448 11 124 3.2E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 SMART SM00471 173 324 6.2E-7 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS19320 c60d351781adce1fc148918154b00d56 393 Pfam PF00072 Response regulator receiver domain 13 124 7.5E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 Gene3D G3DSA:1.10.3210.10 134 365 6.4E-37 T 29-03-2018 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 Gene3D G3DSA:3.40.50.2300 4 133 1.8E-35 T 29-03-2018 AM474_RS19320 c60d351781adce1fc148918154b00d56 393 Pfam PF13487 HD domain 236 305 3.1E-17 T 29-03-2018 AM474_RS20625 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Gene3D G3DSA:1.25.20.10 26 168 1.4E-10 T 29-03-2018 AM474_RS20625 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 40.593 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM474_RS20625 fa6ae1f2ea2bd43fe64f4296d04f4132 341 Pfam PF13525 Outer membrane lipoprotein 29 233 2.4E-80 T 29-03-2018 AM474_RS20625 fa6ae1f2ea2bd43fe64f4296d04f4132 341 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 245 2.8E-86 T 29-03-2018 IPR017689 Outer membrane protein assembly factor BamD AM474_RS03465 045e922384706036a4b40c2c5872501a 201 Gene3D G3DSA:3.40.50.1110 20 201 6.7E-37 T 29-03-2018 AM474_RS03465 045e922384706036a4b40c2c5872501a 201 SUPERFAMILY SSF52266 23 200 2.29E-48 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS03465 045e922384706036a4b40c2c5872501a 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 182 9.0E-24 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS08265 8a42cbc5aca98a10d3bb062e12740906 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 86 3.0E-4 T 29-03-2018 AM474_RS08265 8a42cbc5aca98a10d3bb062e12740906 90 PIRSF PIRSF017854 5 90 1.9E-35 T 29-03-2018 IPR016704 Conjugal transfer, TrbD AM474_RS08265 8a42cbc5aca98a10d3bb062e12740906 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 85 3.6E-10 T 29-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Pfam PF02754 Cysteine-rich domain 171 255 3.8E-12 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Pfam PF02754 Cysteine-rich domain 303 386 1.2E-12 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 PIRSF PIRSF000139 5 408 5.6E-119 T 29-03-2018 AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 SUPERFAMILY SSF54862 18 124 1.46E-18 T 29-03-2018 AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Gene3D G3DSA:3.30.70.20 79 239 3.3E-4 T 29-03-2018 AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Gene3D G3DSA:3.30.70.20 33 78 9.1E-9 T 29-03-2018 AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Pfam PF12838 4Fe-4S dicluster domain 24 89 6.4E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS16040 8a29edaff7cce489e873d91ed276d295 408 Gene3D G3DSA:3.30.70.20 4 32 0.14 T 29-03-2018 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:3.30.420.10 171 388 1.0E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Pfam PF09299 Mu transposase, C-terminal 393 455 1.1E-12 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Pfam PF13518 Helix-turn-helix domain 27 84 4.9E-10 T 29-03-2018 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:1.10.10.60 94 156 1.0E-12 T 29-03-2018 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 SUPERFAMILY SSF53098 171 368 1.21E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Pfam PF00665 Integrase core domain 174 312 1.6E-24 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM474_RS26215 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:2.30.30.130 394 457 1.0E-13 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:3.30.420.10 171 388 1.0E-39 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Pfam PF09299 Mu transposase, C-terminal 393 455 1.1E-12 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Pfam PF13518 Helix-turn-helix domain 27 84 4.9E-10 T 29-03-2018 AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:1.10.10.60 94 156 1.0E-12 T 29-03-2018 AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 SUPERFAMILY SSF53098 171 368 1.21E-21 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Pfam PF00665 Integrase core domain 174 312 1.6E-24 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM474_RS01810 01f9c242231c1520e800c8a632d46dde 559 Gene3D G3DSA:2.30.30.130 394 457 1.0E-13 T 29-03-2018 IPR015378 Transposase-like, Mu, C-terminal AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:1.10.1200.10 2526 2582 5.3E-19 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 1100 1264 1.56E-38 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SMART SM00823 Phosphopantetheine attachment site 4049 4115 0.012 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SMART SM00823 Phosphopantetheine attachment site 2519 2587 0.024 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SMART SM00823 Phosphopantetheine attachment site 1015 1086 0.0011 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 921 992 3.5E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 2411 2493 7.9E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF13193 AMP-binding enzyme C-terminal domain 3937 4020 2.9E-14 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:2.30.38.10 3837 3919 3.6E-22 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:2.30.38.10 2312 2393 2.9E-18 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 3069 3239 1.89E-41 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2144 2155 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2023 2427 9.0E-121 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 937 5.0E-139 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3542 3953 4.6E-131 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 235 504 7.45E-63 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 2781 3038 2.56E-44 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2543 2558 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 658 669 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4070 4085 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF47336 4038 4109 5.23E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 1993 2149 8.5E-46 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.300.30 2398 2525 1.9E-41 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.300.30 3924 4049 1.5E-42 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.300.30 908 1023 2.3E-39 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 2150 2305 9.6E-29 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 662 814 4.2E-37 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 3668 3825 2.3E-31 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF56801 1960 2532 4.32E-149 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2901 3056 1.3E-45 T 29-03-2018 IPR010060 Non-ribosomal peptide synthase AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1388 1542 7.3E-51 T 29-03-2018 IPR010060 Non-ribosomal peptide synthase AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.559.10 3049 3251 3.2E-37 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.559.10 2583 2777 9.7E-34 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 1271 1518 4.0E-46 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF56801 3485 4059 7.85E-156 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00550 Phosphopantetheine attachment site 4048 4107 9.6E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00550 Phosphopantetheine attachment site 2520 2580 5.4E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00550 Phosphopantetheine attachment site 1020 1079 9.2E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF47336 1010 1079 3.14E-19 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1042 1057 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:1.10.1200.10 1024 1092 7.3E-22 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:2.30.38.10 815 905 7.1E-23 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 52 229 2.89E-53 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 3242 3483 2.78E-52 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00668 Condensation domain 3064 3499 7.7E-85 T 29-03-2018 IPR001242 Condensation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00668 Condensation domain 52 497 1.9E-107 T 29-03-2018 IPR001242 Condensation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00668 Condensation domain 1096 1521 1.6E-75 T 29-03-2018 IPR001242 Condensation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00668 Condensation domain 2599 3043 1.1E-80 T 29-03-2018 IPR001242 Condensation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00668 Condensation domain 1548 1980 3.1E-90 T 29-03-2018 IPR001242 Condensation domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 1726 1965 1.45E-54 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 3514 3667 2.7E-46 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.40.50.980 510 661 7.8E-45 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.559.10 39 253 3.0E-51 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.559.10 1093 1287 2.7E-33 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:3.30.559.10 1530 1750 3.3E-40 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00501 AMP-binding enzyme 3522 3929 5.1E-93 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00501 AMP-binding enzyme 517 913 2.2E-100 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Pfam PF00501 AMP-binding enzyme 2003 2403 4.0E-84 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3663 3674 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF47336 2511 2581 1.31E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 1547 1739 9.89E-43 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF52777 2594 2794 8.56E-44 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 SUPERFAMILY SSF56801 474 1031 7.46E-166 T 29-03-2018 AM474_RS31600 ee5aa5a7b5eabb9b8a6ac7081703494e 4136 Gene3D G3DSA:1.10.1200.10 4050 4123 2.6E-20 T 29-03-2018 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 8 298 7.9E-140 T 29-03-2018 IPR017786 Transcription factor, choline sulphate-utilisation, putative AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 SUPERFAMILY SSF53850 97 300 2.53E-36 T 29-03-2018 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.1E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.1E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.1E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 Pfam PF03466 LysR substrate binding domain 93 299 2.0E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 Gene3D G3DSA:1.10.10.10 5 87 8.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 SUPERFAMILY SSF46785 6 86 5.53E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 6.3E-24 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14700 8ff7c5a987d82bc8db3471f0fa941e40 304 Gene3D G3DSA:3.40.190.10 88 211 2.4E-22 T 29-03-2018 AM474_RS04830 a14da35aa5927e6e11e5be5e0d37ef42 253 Pfam PF08241 Methyltransferase domain 47 143 1.4E-25 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS04830 a14da35aa5927e6e11e5be5e0d37ef42 253 Gene3D G3DSA:3.40.50.150 23 250 7.7E-45 T 29-03-2018 AM474_RS04830 a14da35aa5927e6e11e5be5e0d37ef42 253 SUPERFAMILY SSF53335 9 240 2.17E-47 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF01807 CHC2 zinc finger 6 101 9.9E-42 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF117023 525 654 7.85E-27 T 29-03-2018 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF56731 117 427 7.19E-110 T 29-03-2018 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF10410 DnaB-helicase binding domain of primase 374 426 1.3E-8 T 29-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:1.10.860.10 512 658 1.3E-28 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:1.20.50.20 377 421 8.5E-17 T 29-03-2018 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00493 262 333 2.8E-21 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SUPERFAMILY SSF57783 4 101 1.7E-37 T 29-03-2018 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF08278 DNA primase DnaG DnaB-binding 529 652 3.4E-23 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.90.580.10 1 103 1.5E-36 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00766 526 654 9.3E-34 T 29-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF13662 Toprim domain 262 331 1.6E-17 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 255 5.4E-43 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 5.0E-147 T 29-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.40.1360.20 258 376 1.1E-34 T 29-03-2018 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 SMART SM00400 36 90 1.8E-34 T 29-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Hamap MF_00974 DNA primase [dnaG]. 4 655 30.071 T 29-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM474_RS11740 24c7b1421c0592ee7c2dc3e8817160b6 664 Gene3D G3DSA:3.90.980.10 110 243 5.7E-48 T 29-03-2018 IPR013264 DNA primase, catalytic core, N-terminal AM474_RS18135 79994cd1c8e88959935f79661a837fe1 252 Gene3D G3DSA:3.90.1200.10 56 248 5.1E-10 T 29-03-2018 AM474_RS18135 79994cd1c8e88959935f79661a837fe1 252 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 224 2.3E-70 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM474_RS18135 79994cd1c8e88959935f79661a837fe1 252 PIRSF PIRSF026326 3 246 9.5E-68 T 29-03-2018 IPR027023 Putative lipopolysaccharide kinase InaA AM474_RS18135 79994cd1c8e88959935f79661a837fe1 252 SUPERFAMILY SSF56112 35 242 9.49E-13 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 SUPERFAMILY SSF50346 101 175 2.55E-21 T 29-03-2018 IPR011033 PRC-barrel-like AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 SUPERFAMILY SSF50447 7 94 1.73E-25 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 Pfam PF05239 PRC-barrel domain 98 170 3.1E-7 T 29-03-2018 IPR027275 PRC-barrel domain AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 174 1.9E-53 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 Pfam PF01782 RimM N-terminal domain 10 92 2.1E-26 T 29-03-2018 IPR002676 RimM protein GO:0006364 AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 8 175 24.458 T 29-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 Gene3D G3DSA:2.30.30.240 97 170 1.4E-21 T 29-03-2018 AM474_RS08085 dc078be22bac475e3a26082c360e3942 175 Gene3D G3DSA:2.40.30.60 7 95 1.6E-26 T 29-03-2018 IPR002676 RimM protein GO:0006364 AM474_RS28935 5cbf9b0602b798e489b6cf46d4db23f3 158 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 138 1.9E-6 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS28935 5cbf9b0602b798e489b6cf46d4db23f3 158 Gene3D G3DSA:1.10.3720.10 7 151 0.0012 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Gene3D G3DSA:3.30.70.240 623 700 3.2E-30 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Gene3D G3DSA:3.30.70.870 408 499 3.6E-39 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Pfam PF14492 Elongation Factor G, domain II 412 486 6.4E-35 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Pfam PF03144 Elongation factor Tu domain 2 332 399 7.9E-17 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SUPERFAMILY SSF54980 412 489 5.04E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Gene3D G3DSA:2.40.30.10 295 407 5.4E-32 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SMART SM00838 609 696 3.3E-56 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SUPERFAMILY SSF50447 272 412 3.31E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SMART SM00889 488 607 1.2E-69 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SUPERFAMILY SSF54980 612 697 1.77E-28 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Pfam PF00679 Elongation factor G C-terminus 609 694 2.0E-30 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Gene3D G3DSA:3.30.230.10 500 622 1.7E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 109.175 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 PRINTS PR00315 GTP-binding elongation factor signature 86 96 1.6E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 PRINTS PR00315 GTP-binding elongation factor signature 102 113 1.6E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 PRINTS PR00315 GTP-binding elongation factor signature 138 147 1.6E-16 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Gene3D G3DSA:3.40.50.300 2 294 4.0E-57 T 29-03-2018 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SUPERFAMILY SSF52540 6 288 1.59E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 188 8.6E-35 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 SUPERFAMILY SSF54211 487 607 6.57E-42 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Pfam PF03764 Elongation factor G, domain IV 487 605 4.5E-44 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM474_RS29680 352c4f92d15b3df396f377b5bd3334f5 702 Pfam PF00009 Elongation factor Tu GTP binding domain 10 288 2.2E-61 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS05825 46ea41293cbe1ab96d06009a49c9c795 316 PIRSF PIRSF037442 1 308 2.1E-42 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AM474_RS05825 46ea41293cbe1ab96d06009a49c9c795 316 Pfam PF12146 Serine aminopeptidase, S33 27 288 1.3E-68 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS05825 46ea41293cbe1ab96d06009a49c9c795 316 Gene3D G3DSA:3.40.50.1820 1 313 7.7E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05825 46ea41293cbe1ab96d06009a49c9c795 316 SUPERFAMILY SSF53474 6 305 5.63E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF03466 LysR substrate binding domain 88 290 1.0E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 176 262 4.5E-23 T 29-03-2018 AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF46785 6 111 8.52E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:1.10.10.10 2 78 4.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 Gene3D G3DSA:3.40.190.10 79 175 8.6E-18 T 29-03-2018 AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 SUPERFAMILY SSF53850 87 294 6.88E-43 T 29-03-2018 AM474_RS29930 06ae67d3ffc4f114215bbd1faeafacfe 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 8.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09935 97f44123089d6ace3dc25523fb9db5da 236 Pfam PF04172 LrgB-like family 21 233 1.3E-72 T 29-03-2018 IPR007300 CidB/LrgB family AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF46785 5 73 5.54E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 SMART SM00345 12 69 1.8E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:1.10.10.10 3 68 3.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 8.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 8.9E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 SUPERFAMILY SSF64288 57 232 1.43E-44 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 3.1E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 SMART SM00866 90 229 1.3E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 Gene3D G3DSA:3.40.1410.10 69 235 3.7E-37 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS02625 391d2b014a1181bc977ccd04845ad314 239 Pfam PF07702 UTRA domain 90 227 4.9E-36 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 Gene3D G3DSA:3.55.50.10 95 186 6.1E-32 T 29-03-2018 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 Pfam PF05954 Phage late control gene D protein (GPD) 26 327 2.1E-104 T 29-03-2018 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 SUPERFAMILY SSF69349 439 623 1.65E-41 T 29-03-2018 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 8 520 3.4E-203 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 Gene3D G3DSA:2.40.50.230 367 449 8.3E-40 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 SUPERFAMILY SSF69279 8 181 1.28E-62 T 29-03-2018 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 SUPERFAMILY SSF69279 187 360 4.42E-36 T 29-03-2018 AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 20 503 3.4E-197 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS14340 340a9d9d616d5c8cf2ec6df96049c019 643 SUPERFAMILY SSF69255 362 449 1.15E-35 T 29-03-2018 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.10.540.10 1 134 2.5E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF47203 243 390 3.54E-42 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 6.2E-22 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 385 9.5E-28 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 SUPERFAMILY SSF56645 7 238 6.54E-77 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.1E-34 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:2.40.110.10 135 226 1.9E-32 T 29-03-2018 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 Gene3D G3DSA:1.20.140.10 227 391 9.2E-38 T 29-03-2018 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 PIRSF PIRSF016578 15 94 0.089 T 29-03-2018 AM474_RS12460 8030e68d0852747dddc47237a6bc3920 393 PIRSF PIRSF016578 149 391 1.8E-10 T 29-03-2018 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 PIRSF PIRSF000429 1 396 2.1E-112 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 3.2E-124 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 274 394 1.69E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF00108 Thiolase, N-terminal domain 7 263 2.4E-86 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 SUPERFAMILY SSF53901 7 272 1.56E-77 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 268 392 2.6E-29 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 181 267 3.0E-19 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 Gene3D G3DSA:3.40.47.10 1 180 1.0E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00060 d74765b90a0911e76f77287440c0c9b9 396 Pfam PF02803 Thiolase, C-terminal domain 273 394 5.5E-41 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS13715 894da4cb2377ec0c2248fad4d9fce1ec 134 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 120 1.2E-45 T 29-03-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 AM474_RS13715 894da4cb2377ec0c2248fad4d9fce1ec 134 Pfam PF03817 Malonate transporter MadL subunit 1 117 9.6E-50 T 29-03-2018 IPR004690 Malonate transporter MadL subunit GO:0016020 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00072 Response regulator receiver domain 5 113 1.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:1.10.10.10 123 225 1.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00862 147 223 3.5E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 Gene3D G3DSA:3.40.50.2300 2 122 5.4E-36 T 29-03-2018 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 4.8E-16 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF46894 123 223 1.02E-21 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 SUPERFAMILY SSF52172 4 128 8.25E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS05270 5c23d62536a0f573f9e3b6cd54c64c34 225 SMART SM00448 2 113 1.3E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 164 2.9E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:3.40.50.1000 47 197 7.5E-28 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 170 9.3E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 Pfam PF13419 Haloacid dehalogenase-like hydrolase 42 170 2.5E-17 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 SUPERFAMILY SSF56784 5 195 2.04E-38 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09460 b4e3cdf7dcb74bc003ad80259969a060 198 Gene3D G3DSA:3.40.50.1000 1 44 0.0089 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 315 6.2E-17 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 7.7E-38 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 Gene3D G3DSA:3.30.360.10 160 312 3.2E-57 T 29-03-2018 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 SUPERFAMILY SSF51735 2 172 2.0E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 Gene3D G3DSA:3.40.50.720 1 159 6.9E-48 T 29-03-2018 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.91 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 SUPERFAMILY SSF55347 150 312 1.09E-51 T 29-03-2018 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 29-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 SMART SM00859 3 142 4.9E-64 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS11335 993dd813faeadfcf3d6386a58dda4044 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 1.8E-132 T 29-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS09055 d5d595938399f2f5ca6f66feeed0fcf1 667 Gene3D G3DSA:2.170.130.10 40 157 5.8E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS09055 d5d595938399f2f5ca6f66feeed0fcf1 667 Gene3D G3DSA:2.40.170.20 158 667 1.4E-49 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS09055 d5d595938399f2f5ca6f66feeed0fcf1 667 SUPERFAMILY SSF56935 44 667 3.92E-82 T 29-03-2018 AM474_RS09055 d5d595938399f2f5ca6f66feeed0fcf1 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 144 4.8E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS09055 d5d595938399f2f5ca6f66feeed0fcf1 667 Pfam PF00593 TonB dependent receptor 219 666 5.9E-29 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:1.10.730.10 372 536 3.5E-34 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:3.40.50.620 3 78 7.9E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:2.40.50.140 568 678 8.2E-23 T 29-03-2018 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:2.170.220.10 180 248 3.0E-15 T 29-03-2018 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 2.2E-24 T 29-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 SUPERFAMILY SSF50249 571 677 1.64E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 545 39.356 T 29-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:3.40.50.620 249 366 4.6E-20 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Pfam PF09334 tRNA synthetases class I (M) 7 395 3.0E-154 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 678 2.1E-40 T 29-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Pfam PF01588 Putative tRNA binding domain 582 675 3.4E-20 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 Gene3D G3DSA:2.20.28.20 141 174 1.6E-15 T 29-03-2018 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 SUPERFAMILY SSF47323 389 547 1.42E-42 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 SUPERFAMILY SSF52374 4 140 1.01E-98 T 29-03-2018 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 SUPERFAMILY SSF52374 175 386 1.01E-98 T 29-03-2018 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 SUPERFAMILY SSF57770 141 175 5.36E-12 T 29-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS06825 f5825eb6c7ecea5e2a6f3b9b6e01fb61 678 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 535 2.0E-174 T 29-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 137 236 5.5E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 337 1.2E-8 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Gene3D G3DSA:1.20.140.10 354 511 6.6E-23 T 29-03-2018 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 508 2.4E-13 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Gene3D G3DSA:1.10.540.10 79 238 1.5E-32 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 SUPERFAMILY SSF47203 363 513 4.83E-27 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Pfam PF09317 Domain of unknown function (DUF1974) 517 802 4.1E-105 T 29-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 SUPERFAMILY SSF56645 123 358 1.31E-46 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS02690 8f7165123b7d7d245534ef6715f694a2 815 Gene3D G3DSA:2.40.110.10 239 353 4.8E-17 T 29-03-2018 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 151 340 8.76E-48 T 29-03-2018 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 8 163 1.1E-42 T 29-03-2018 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.8E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.8E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.8E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.8E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.8E-65 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 Pfam PF06723 MreB/Mbl protein 11 337 3.6E-148 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 249 319 9.7E-10 T 29-03-2018 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 Gene3D G3DSA:3.30.420.40 164 248 9.3E-26 T 29-03-2018 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 338 9.2E-161 T 29-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM474_RS20980 70fa0299c36d1ccf7815142bcbe5bdab 345 SUPERFAMILY SSF53067 9 150 3.02E-38 T 29-03-2018 AM474_RS25230 2b86b865cc27d99a6fd8861cbfa815fa 522 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 6 495 1.4E-49 T 29-03-2018 IPR013381 CRISPR-associated protein Cse1 AM474_RS25230 2b86b865cc27d99a6fd8861cbfa815fa 522 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 6 470 4.0E-94 T 29-03-2018 IPR013381 CRISPR-associated protein Cse1 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 SUPERFAMILY SSF46548 147 265 1.05E-18 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 22 358 2.4E-152 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 202 213 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 Pfam PF08331 Domain of unknown function (DUF1730) 70 148 5.4E-25 T 29-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 Pfam PF13484 4Fe-4S double cluster binding domain 201 265 1.6E-19 T 29-03-2018 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 Gene3D G3DSA:3.30.70.20 208 290 2.1E-10 T 29-03-2018 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 15 324 50.2 T 29-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AM474_RS18430 0ae02b8079368bc568313bec03d8e287 361 Gene3D G3DSA:3.30.70.20 120 207 4.8E-4 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:2.40.50.100 208 250 2.9E-4 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:2.40.50.100 37 126 1.6E-7 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 117 174 1.96E-6 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Pfam PF13437 HlyD family secretion protein 216 319 2.2E-13 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:1.20.5.730 165 207 6.2E-4 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 186 284 2.35E-6 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Gene3D G3DSA:1.10.287.470 127 164 1.1E-11 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 Pfam PF13533 Biotin-lipoyl like 50 96 2.2E-13 T 29-03-2018 AM474_RS16665 1484a98b8341ad064e92df891a4f7a0f 357 SUPERFAMILY SSF111369 43 123 3.4E-9 T 29-03-2018 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-32 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-32 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-32 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-32 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.40.50.300 1 79 3.3E-8 T 29-03-2018 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 PIRSF PIRSF006641 1 366 1.3E-159 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF81271 282 363 5.01E-38 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:1.10.150.300 110 202 3.1E-26 T 29-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 5.2E-162 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.1E-41 T 29-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 SUPERFAMILY SSF52540 3 304 1.74E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Gene3D G3DSA:3.10.20.30 266 365 2.1E-47 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 45.261 T 29-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM474_RS19940 1f09514349a2e4a5af6a81dccb56358b 366 Pfam PF01926 50S ribosome-binding GTPase 5 121 5.0E-22 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS15485 02bd2ee0b4f24bb986b853e2231d6a15 304 Pfam PF16363 GDP-mannose 4,6 dehydratase 36 291 5.3E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15485 02bd2ee0b4f24bb986b853e2231d6a15 304 SUPERFAMILY SSF51735 4 299 2.08E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15485 02bd2ee0b4f24bb986b853e2231d6a15 304 Gene3D G3DSA:3.40.50.720 2 180 3.3E-24 T 29-03-2018 AM474_RS15485 02bd2ee0b4f24bb986b853e2231d6a15 304 Gene3D G3DSA:3.90.25.10 181 303 1.9E-31 T 29-03-2018 AM474_RS25035 22a512b185f5ed3a7a0cc1a45a364919 211 Pfam PF12697 Alpha/beta hydrolase family 23 203 9.4E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS25035 22a512b185f5ed3a7a0cc1a45a364919 211 Gene3D G3DSA:3.40.50.1820 4 209 8.9E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25035 22a512b185f5ed3a7a0cc1a45a364919 211 SUPERFAMILY SSF53474 36 89 1.52E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25035 22a512b185f5ed3a7a0cc1a45a364919 211 SUPERFAMILY SSF53474 145 207 1.52E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS20795 7bfbf8073a8d691b9fbc5723508b3ddb 600 Gene3D G3DSA:3.40.720.10 231 533 6.3E-24 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS20795 7bfbf8073a8d691b9fbc5723508b3ddb 600 Pfam PF00884 Sulfatase 239 529 4.2E-49 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS20795 7bfbf8073a8d691b9fbc5723508b3ddb 600 SUPERFAMILY SSF53649 237 533 4.49E-31 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS20795 7bfbf8073a8d691b9fbc5723508b3ddb 600 Pfam PF08019 Domain of unknown function (DUF1705) 55 178 3.9E-6 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM474_RS32125 056871f60d6598941ec0210d6ca86f3c 472 Pfam PF02321 Outer membrane efflux protein 68 256 2.9E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32125 056871f60d6598941ec0210d6ca86f3c 472 Pfam PF02321 Outer membrane efflux protein 287 465 3.7E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32125 056871f60d6598941ec0210d6ca86f3c 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 467 3.6E-103 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS32125 056871f60d6598941ec0210d6ca86f3c 472 Gene3D G3DSA:1.20.1600.10 26 472 3.2E-90 T 29-03-2018 AM474_RS32125 056871f60d6598941ec0210d6ca86f3c 472 SUPERFAMILY SSF56954 12 470 1.11E-100 T 29-03-2018 AM474_RS21590 e722d69a2720a16970fecd8aeb71f5c1 352 Gene3D G3DSA:3.40.50.720 4 156 3.4E-21 T 29-03-2018 AM474_RS21590 e722d69a2720a16970fecd8aeb71f5c1 352 SUPERFAMILY SSF51735 4 136 7.17E-17 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS21590 e722d69a2720a16970fecd8aeb71f5c1 352 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 6 123 2.5E-11 T 29-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 3.8E-18 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 3.8E-18 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 3.8E-18 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 3.8E-18 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 1.1E-18 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.1E-18 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 1.1E-18 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 26 50 1.1E-18 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 1.1E-18 T 29-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 271 5.0E-55 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF50621 245 386 1.51E-30 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:2.40.37.10 256 387 9.1E-29 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 113 365 9.4E-15 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 SUPERFAMILY SSF51419 25 273 4.86E-66 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 Gene3D G3DSA:3.20.20.10 36 255 6.9E-50 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS20785 d2296bf5c2e39fae8ca731c0a1abb27a 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF50249 49 125 1.77E-29 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.8E-15 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.3E-219 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:3.40.50.300 129 419 4.8E-57 T 29-03-2018 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 253.582 T 29-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF52540 90 371 3.24E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Gene3D G3DSA:2.40.50.140 2 126 7.1E-46 T 29-03-2018 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SUPERFAMILY SSF68912 1 46 3.92E-11 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00382 170 355 6.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00959 5 47 9.0E-16 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.7E-24 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 SMART SM00357 52 118 8.8E-20 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS16630 397e54baea9a8d6f1559af43fbbe05c1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.0E-32 T 29-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Gene3D G3DSA:1.10.10.60 142 200 7.2E-12 T 29-03-2018 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Gene3D G3DSA:1.10.10.60 201 253 5.9E-16 T 29-03-2018 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Gene3D G3DSA:2.60.120.10 10 71 1.2E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF51182 17 129 1.63E-6 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 Pfam PF12833 Helix-turn-helix domain 169 247 1.0E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF46689 152 196 9.68E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SMART SM00342 163 246 1.5E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 SUPERFAMILY SSF46689 199 249 1.7E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 5.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS05350 fe4c0d1571e5afb93a8d1f9efaa7a7db 254 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 5.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 SUPERFAMILY SSF111369 51 296 7.19E-75 T 29-03-2018 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 Gene3D G3DSA:2.40.50.100 62 110 6.2E-16 T 29-03-2018 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 370 1.1E-82 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 Gene3D G3DSA:2.40.50.100 166 339 3.8E-6 T 29-03-2018 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 Gene3D G3DSA:1.10.287.470 111 165 1.6E-12 T 29-03-2018 AM474_RS20340 7592d4fae7be6ccd91710eea244a9d40 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 289 1.3E-11 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 SUPERFAMILY SSF55073 241 391 6.51E-26 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Gene3D G3DSA:3.30.70.270 219 399 2.5E-35 T 29-03-2018 AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 SMART SM00304 171 223 8.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 390 5.8E-27 T 29-03-2018 IPR000160 GGDEF domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Pfam PF00672 HAMP domain 171 219 2.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 7.3E-41 T 29-03-2018 IPR032244 LapD/MoxY, periplasmic domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Pfam PF00563 EAL domain 415 643 2.8E-46 T 29-03-2018 IPR001633 EAL domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 SUPERFAMILY SSF141868 414 647 3.92E-46 T 29-03-2018 IPR001633 EAL domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 SMART SM00267 225 398 5.1E-31 T 29-03-2018 IPR000160 GGDEF domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 389 8.2E-19 T 29-03-2018 IPR000160 GGDEF domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 Gene3D G3DSA:3.20.20.450 406 647 9.5E-47 T 29-03-2018 IPR001633 EAL domain AM474_RS26285 8ba36f0e5d5523fc1c5a24cae52df9a0 650 SMART SM00052 408 648 4.5E-12 T 29-03-2018 IPR001633 EAL domain AM474_RS31180 9da00522cb6642aa73ff8d1ebc0b43ae 417 SUPERFAMILY SSF103473 17 391 1.16E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS31180 9da00522cb6642aa73ff8d1ebc0b43ae 417 Gene3D G3DSA:1.20.1250.20 215 416 4.8E-13 T 29-03-2018 AM474_RS31180 9da00522cb6642aa73ff8d1ebc0b43ae 417 Pfam PF07690 Major Facilitator Superfamily 31 338 8.6E-34 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS31180 9da00522cb6642aa73ff8d1ebc0b43ae 417 Gene3D G3DSA:1.20.1250.20 20 213 2.7E-24 T 29-03-2018 AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 164 1.4E-23 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 ProSitePatterns PS00935 Glyoxalase I signature 2. 109 125 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 12 168 3.9E-51 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 Gene3D G3DSA:3.10.180.10 22 170 1.0E-35 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS17315 2332afe41d43202663eb4fe2f96612d8 176 SUPERFAMILY SSF54593 9 167 2.82E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 SMART SM00738 2 111 6.3E-48 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 29-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.8E-28 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 SUPERFAMILY SSF82679 3 113 6.54E-39 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 SUPERFAMILY SSF50104 121 177 1.16E-19 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 Gene3D G3DSA:2.30.30.30 118 177 3.2E-22 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 SMART SM00739 123 150 1.4E-7 T 29-03-2018 IPR005824 KOW AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 Gene3D G3DSA:3.30.70.940 2 115 5.6E-42 T 29-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 1.3E-66 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.831 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 8.4E-20 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 8.4E-20 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 8.4E-20 T 29-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM474_RS11230 f76fd1bd210e72ef0403b96843785b58 177 Pfam PF00467 KOW motif 126 156 5.1E-9 T 29-03-2018 IPR005824 KOW AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 SUPERFAMILY SSF46689 12 92 1.5E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 154 207 3.3E-12 T 29-03-2018 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 SUPERFAMILY SSF48498 91 202 8.16E-11 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Gene3D G3DSA:1.10.357.10 69 212 6.1E-31 T 29-03-2018 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Gene3D G3DSA:1.10.10.60 2 68 1.5E-18 T 29-03-2018 AM474_RS07750 0fa40e8592cbf6fb70f1ad7b7c7f0cc8 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.4E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 SUPERFAMILY SSF56059 86 351 4.95E-68 T 29-03-2018 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Pfam PF02785 Biotin carboxylase C-terminal domain 339 445 6.7E-39 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Gene3D G3DSA:3.30.470.20 213 448 4.6E-95 T 29-03-2018 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Gene3D G3DSA:3.30.1490.20 127 212 2.2E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 1.3E-41 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Gene3D G3DSA:3.40.50.20 4 126 9.0E-50 T 29-03-2018 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 SUPERFAMILY SSF51246 334 449 1.46E-39 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 1.4E-73 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 SMART SM00878 339 445 7.1E-60 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS12215 64aa83a4c844e49824e225f7edc54133 458 SUPERFAMILY SSF52440 3 116 6.83E-44 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS19395 9d504ef6958951124be3f802d502565a 144 SUPERFAMILY SSF55961 1 144 2.55E-35 T 29-03-2018 AM474_RS19395 9d504ef6958951124be3f802d502565a 144 Gene3D G3DSA:3.30.530.20 2 144 1.0E-33 T 29-03-2018 IPR023393 START-like domain AM474_RS19395 9d504ef6958951124be3f802d502565a 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 1.4E-34 T 29-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 SUPERFAMILY SSF51971 343 527 1.65E-40 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 408 1.3E-5 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 628 642 1.3E-5 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 Gene3D G3DSA:3.50.50.60 493 634 3.5E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 SUPERFAMILY SSF51395 11 372 4.4E-108 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 644 2.7E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 340 1.5E-70 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 507 525 1.1E-11 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 627 643 1.1E-11 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 1.1E-11 T 29-03-2018 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 SUPERFAMILY SSF51905 479 636 1.15E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 Gene3D G3DSA:3.50.50.60 385 492 1.0E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19150 9c8f8173708772a4532ceb26b2d79cd7 681 Gene3D G3DSA:3.20.20.70 12 379 5.9E-107 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 SMART SM01329 4 353 6.0E-212 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 2.0E-139 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 Gene3D G3DSA:3.40.718.10 213 358 1.2E-63 T 29-03-2018 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 Gene3D G3DSA:3.40.718.10 1 212 8.1E-63 T 29-03-2018 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.7E-163 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 SUPERFAMILY SSF53659 2 359 6.53E-126 T 29-03-2018 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 53.448 T 29-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AM474_RS04825 22b47038f04f801158c4d56c684a7b01 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 463 2.4E-243 T 29-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52172 5 186 4.84E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00158 Sigma-54 interaction domain 141 308 3.8E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.7E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.7E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.300 148 313 4.1E-31 T 29-03-2018 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:3.40.50.2300 2 147 3.9E-33 T 29-03-2018 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.8.60 314 382 1.9E-22 T 29-03-2018 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00382 161 304 7.8E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF00072 Response regulator receiver domain 7 115 1.4E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF52540 140 384 2.01E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 SUPERFAMILY SSF46689 381 465 6.27E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 4.7E-13 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 Gene3D G3DSA:1.10.10.60 383 466 1.4E-17 T 29-03-2018 AM474_RS17240 52c6c342f610b5d2d564aea994e3b4ba 476 SMART SM00448 5 116 5.5E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS20555 51dfc5b3f3930b4b98e49801b1c05cef 146 SUPERFAMILY SSF54534 9 143 1.32E-40 T 29-03-2018 AM474_RS20555 51dfc5b3f3930b4b98e49801b1c05cef 146 Gene3D G3DSA:3.10.50.40 5 146 1.3E-25 T 29-03-2018 AM474_RS20555 51dfc5b3f3930b4b98e49801b1c05cef 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 141 1.0E-23 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 123 136 5.9E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 307 318 5.9E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 292 307 5.9E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 147 155 5.9E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 PRINTS PR00046 Major sigma-70 factor signature 271 283 5.9E-28 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 54 333 2.2E-140 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.10.10 261 330 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04542 Sigma-70 region 2 99 168 7.5E-22 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.10.10 169 219 3.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 4 333 40.747 T 29-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF00140 Sigma-70 factor, region 1.2 61 93 3.2E-13 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Gene3D G3DSA:1.10.601.10 3 168 7.6E-60 T 29-03-2018 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88946 61 169 2.88E-45 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88659 230 327 2.62E-25 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 292 318 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 123 136 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04539 Sigma-70 region 3 179 253 2.7E-20 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 Pfam PF04545 Sigma-70, region 4 267 320 1.3E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 SUPERFAMILY SSF88659 172 246 5.67E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07470 9f0010d7c668db6bec136c6e164678f2 334 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 96 322 3.0E-37 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 PIRSF PIRSF000239 1 198 6.5E-54 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 SUPERFAMILY SSF52833 3 193 3.43E-64 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 Gene3D G3DSA:3.30.1020.10 161 198 1.2E-15 T 29-03-2018 AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 192 1.4E-12 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 Gene3D G3DSA:3.40.30.10 4 160 1.2E-38 T 29-03-2018 AM474_RS22905 e064d60a2d6ee4d6af486b66e49a6918 199 Pfam PF00578 AhpC/TSA family 5 138 9.8E-34 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 1.2E-54 T 29-03-2018 AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 Gene3D G3DSA:3.40.50.720 3 47 3.4E-11 T 29-03-2018 AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 Gene3D G3DSA:3.40.50.720 48 256 2.0E-57 T 29-03-2018 AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 SUPERFAMILY SSF51735 4 256 1.86E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.7E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06310 2c269d853d156a0c156fe2328acb58e8 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.7E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 193 1.1E-4 T 29-03-2018 AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.6E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.6E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.6E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.6E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.6E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 SUPERFAMILY SSF51735 1 277 3.53E-70 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 Pfam PF00106 short chain dehydrogenase 7 201 3.8E-51 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 Gene3D G3DSA:3.40.50.720 1 262 1.0E-64 T 29-03-2018 AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26815 3fe930a119dcf0df74f098a4dc3fc0df 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS31080 af0e1564c50bdded7fb9a938b7429a94 93 Pfam PF06155 Protein of unknown function (DUF971) 13 90 1.3E-21 T 29-03-2018 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 AM474_RS28020 e792f64464344c45074552e2d6825005 453 Gene3D G3DSA:3.60.120.10 56 451 3.5E-151 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS28020 e792f64464344c45074552e2d6825005 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 17 138 1.9E-15 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS28020 e792f64464344c45074552e2d6825005 453 SUPERFAMILY SSF56322 5 444 1.31E-141 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS28020 e792f64464344c45074552e2d6825005 453 Pfam PF00425 chorismate binding enzyme 182 435 5.9E-99 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS28020 e792f64464344c45074552e2d6825005 453 PRINTS PR00095 Anthranilate synthase component I signature 392 406 3.3E-16 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS28020 e792f64464344c45074552e2d6825005 453 PRINTS PR00095 Anthranilate synthase component I signature 283 296 3.3E-16 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS28020 e792f64464344c45074552e2d6825005 453 PRINTS PR00095 Anthranilate synthase component I signature 297 310 3.3E-16 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS28020 e792f64464344c45074552e2d6825005 453 PRINTS PR00095 Anthranilate synthase component I signature 377 391 3.3E-16 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS28020 e792f64464344c45074552e2d6825005 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 93 439 2.1E-115 T 29-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AM474_RS04065 068160e9a4c382249fddb310843a04db 326 Gene3D G3DSA:3.90.226.10 65 314 1.7E-35 T 29-03-2018 AM474_RS04065 068160e9a4c382249fddb310843a04db 326 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 75 285 1.6E-48 T 29-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM474_RS04065 068160e9a4c382249fddb310843a04db 326 Pfam PF01343 Peptidase family S49 141 289 2.2E-35 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM474_RS04065 068160e9a4c382249fddb310843a04db 326 SUPERFAMILY SSF52096 54 184 4.52E-44 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS04065 068160e9a4c382249fddb310843a04db 326 SUPERFAMILY SSF52096 213 275 4.52E-44 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS24110 92c61410af87826f2f326ff0967e5dcc 370 Pfam PF05651 Putative sugar diacid recognition 4 137 1.7E-49 T 29-03-2018 IPR008599 Putative sugar diacid recognition AM474_RS24110 92c61410af87826f2f326ff0967e5dcc 370 Gene3D G3DSA:1.10.10.60 305 340 8.8E-7 T 29-03-2018 AM474_RS24110 92c61410af87826f2f326ff0967e5dcc 370 Pfam PF13556 PucR C-terminal helix-turn-helix domain 306 363 1.4E-17 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 SMART SM00560 201 344 0.0045 T 29-03-2018 IPR006558 LamG-like jellyroll fold AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 SUPERFAMILY SSF49899 135 344 3.8E-23 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 Gene3D G3DSA:2.60.120.200 122 359 8.2E-26 T 29-03-2018 AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 Pfam PF01618 MotA/TolQ/ExbB proton channel family 468 581 2.1E-27 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 197 342 1.1E-13 T 29-03-2018 AM474_RS22155 0e7dc9ecb9d00d7cc5f101c7922471cc 615 Pfam PF10102 Domain of unknown function (DUF2341) 71 154 2.4E-22 T 29-03-2018 IPR018765 Domain of unknown function DUF2341 AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 311 6.7E-134 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 SUPERFAMILY SSF56042 163 339 5.38E-50 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 SUPERFAMILY SSF55326 6 158 1.7E-38 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 1.7E-19 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 PIRSF PIRSF036407 1 344 3.9E-113 T 29-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 Hamap MF_00625 Selenide, water dikinase [selD]. 4 344 44.883 T 29-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 343 1.4E-32 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 Gene3D G3DSA:3.30.1330.10 1 161 1.2E-35 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS27385 d75b55d41798ae5eb0390ce083e074b7 344 Gene3D G3DSA:3.90.650.10 163 344 6.9E-42 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 Gene3D G3DSA:1.10.275.10 1 196 3.8E-70 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 507 1.2E-219 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 503 44.869 T 29-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 Gene3D G3DSA:1.20.200.10 197 508 3.3E-122 T 29-03-2018 AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 29-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 Pfam PF00221 Aromatic amino acid lyase 10 469 9.5E-185 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AM474_RS17380 31395e30af56c781f50908cad0bf04d3 509 SUPERFAMILY SSF48557 3 505 4.87E-191 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 SUPERFAMILY SSF53850 87 284 5.43E-32 T 29-03-2018 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 Gene3D G3DSA:3.40.190.10 175 262 4.5E-22 T 29-03-2018 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 Pfam PF03466 LysR substrate binding domain 87 284 1.5E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 Gene3D G3DSA:3.40.190.10 89 174 8.6E-16 T 29-03-2018 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.1E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 SUPERFAMILY SSF46785 1 84 9.54E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 Gene3D G3DSA:1.10.10.10 1 88 8.5E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25610 293a05f9126d9abb10a4b61293998a9b 286 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 284 1.3E-121 T 29-03-2018 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 SUPERFAMILY SSF46785 5 88 1.84E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 Pfam PF03466 LysR substrate binding domain 88 292 1.0E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 Gene3D G3DSA:3.40.190.10 82 203 4.3E-13 T 29-03-2018 AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 SUPERFAMILY SSF53850 89 293 2.17E-26 T 29-03-2018 AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.4E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS02010 c85e9e793ff00086a009a2d82f123802 295 Gene3D G3DSA:1.10.10.10 1 81 4.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 SUPERFAMILY SSF53474 282 522 7.13E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 Pfam PF11806 Domain of unknown function (DUF3327) 171 281 1.2E-18 T 29-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 Gene3D G3DSA:2.60.40.10 142 264 1.1E-26 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 Gene3D G3DSA:3.40.50.1820 272 526 2.7E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 SUPERFAMILY SSF81296 146 277 1.06E-18 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS31860 72e7e77dca0ba9bcd4346cf8cc1fecca 526 Pfam PF00756 Putative esterase 300 520 4.2E-33 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 Pfam PF13410 Glutathione S-transferase, C-terminal domain 131 203 2.1E-6 T 29-03-2018 AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 Gene3D G3DSA:1.20.1050.10 97 206 6.7E-18 T 29-03-2018 AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 2.0E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 Gene3D G3DSA:3.40.30.10 4 96 2.5E-19 T 29-03-2018 AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 SUPERFAMILY SSF47616 84 201 2.52E-13 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS21390 1ac336db0843cfb217dbed25e4747290 211 SUPERFAMILY SSF52833 5 87 1.14E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS07895 349ee05a43f8340b7c20fd75a76ca727 171 Pfam PF01584 CheW-like domain 17 155 6.4E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07895 349ee05a43f8340b7c20fd75a76ca727 171 SUPERFAMILY SSF50341 17 158 3.27E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07895 349ee05a43f8340b7c20fd75a76ca727 171 Gene3D G3DSA:2.40.50.180 33 116 3.3E-16 T 29-03-2018 AM474_RS07895 349ee05a43f8340b7c20fd75a76ca727 171 SMART SM00260 12 153 1.6E-10 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS16185 031af5448b7f7ae6478632389d8ff7a2 316 Gene3D G3DSA:2.40.170.20 36 202 0.004 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS16185 031af5448b7f7ae6478632389d8ff7a2 316 Pfam PF13557 Putative MetA-pathway of phenol degradation 76 310 1.7E-57 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AM474_RS16185 031af5448b7f7ae6478632389d8ff7a2 316 Gene3D G3DSA:2.40.160.20 203 298 1.0E-4 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS15010 5f3a5503b06d0d97c05ca8b157a10d8b 394 Gene3D G3DSA:3.40.50.150 96 376 2.7E-69 T 29-03-2018 AM474_RS15010 5f3a5503b06d0d97c05ca8b157a10d8b 394 SUPERFAMILY SSF53335 109 377 2.52E-84 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS15010 5f3a5503b06d0d97c05ca8b157a10d8b 394 PIRSF PIRSF003085 1 394 2.5E-128 T 29-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AM474_RS15010 5f3a5503b06d0d97c05ca8b157a10d8b 394 Pfam PF02353 Mycolic acid cyclopropane synthetase 98 372 2.0E-105 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10665 4c9c487b8c1cce2411c2347a0d09ff8a 265 Gene3D G3DSA:3.40.50.300 1 241 4.8E-57 T 29-03-2018 AM474_RS10665 4c9c487b8c1cce2411c2347a0d09ff8a 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS10665 4c9c487b8c1cce2411c2347a0d09ff8a 265 SUPERFAMILY SSF52540 5 230 5.0E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10665 4c9c487b8c1cce2411c2347a0d09ff8a 265 Pfam PF00005 ABC transporter 21 168 2.1E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10665 4c9c487b8c1cce2411c2347a0d09ff8a 265 SMART SM00382 29 238 5.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 Gene3D G3DSA:2.30.38.10 345 421 4.8E-16 T 29-03-2018 AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 Gene3D G3DSA:3.40.50.980 173 344 8.3E-41 T 29-03-2018 AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 Gene3D G3DSA:3.40.50.980 6 172 3.9E-36 T 29-03-2018 AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 SUPERFAMILY SSF56801 8 540 2.22E-113 T 29-03-2018 AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 Pfam PF00501 AMP-binding enzyme 12 428 3.5E-91 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS27260 037b5ed737b399b43dd189658f1e98c4 555 Gene3D G3DSA:3.30.300.30 423 546 3.7E-12 T 29-03-2018 AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 TIGRFAM TIGR00595 priA: primosomal protein N' 225 736 5.5E-184 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 Pfam PF00270 DEAD/DEAH box helicase 207 367 1.8E-14 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 SMART SM00490 496 593 2.0E-9 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 SMART SM00487 199 395 2.7E-25 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 SUPERFAMILY SSF52540 175 383 1.2E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 SUPERFAMILY SSF52540 499 616 1.78E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 SUPERFAMILY SSF52540 413 438 1.78E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 Gene3D G3DSA:3.40.50.300 404 617 4.3E-21 T 29-03-2018 AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 738 25.209 T 29-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 Pfam PF00271 Helicase conserved C-terminal domain 522 592 4.6E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS17630 2dafd01ac5bcd4c8f25a771be91e66dd 739 Gene3D G3DSA:3.40.50.300 200 365 3.7E-29 T 29-03-2018 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Gene3D G3DSA:1.10.540.10 23 159 1.2E-21 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 493 598 2.4E-22 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 SUPERFAMILY SSF47203 287 474 1.43E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 2.3E-19 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 27 7.1E-8 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 SUPERFAMILY SSF56645 38 279 8.12E-61 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 454 6.1E-19 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Gene3D G3DSA:1.20.140.10 278 464 1.2E-39 T 29-03-2018 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Gene3D G3DSA:2.40.110.10 161 274 4.0E-25 T 29-03-2018 AM474_RS25485 315792cde2e8c6993f05e5beceeda624 606 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 157 2.6E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS14470 12ea1757853b0a5f5c20bddeb6ef9940 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 189 1.6E-25 T 29-03-2018 IPR023214 HAD-like domain AM474_RS14470 12ea1757853b0a5f5c20bddeb6ef9940 221 SUPERFAMILY SSF56784 8 220 3.81E-55 T 29-03-2018 IPR023214 HAD-like domain AM474_RS14470 12ea1757853b0a5f5c20bddeb6ef9940 221 Gene3D G3DSA:1.10.150.240 24 79 8.4E-20 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS14470 12ea1757853b0a5f5c20bddeb6ef9940 221 Gene3D G3DSA:3.40.50.1000 80 221 5.4E-29 T 29-03-2018 IPR023214 HAD-like domain AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF13522 Glutamine amidotransferase domain 64 208 5.4E-15 T 29-03-2018 AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.742 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.0E-161 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF53271 250 483 1.27E-70 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.60.20.10 2 257 6.1E-54 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 Pfam PF00156 Phosphoribosyl transferase domain 276 393 5.5E-9 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 SUPERFAMILY SSF56235 2 257 4.55E-70 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 PIRSF PIRSF000485 1 481 5.3E-159 T 29-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM474_RS04775 fb2c5dfe1b19287cf44507511e221891 501 Gene3D G3DSA:3.40.50.2020 275 444 2.2E-35 T 29-03-2018 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 PIRSF PIRSF000525 1 361 4.8E-151 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 Gene3D G3DSA:3.40.640.10 17 258 2.7E-26 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 Gene3D G3DSA:3.90.1150.10 259 359 3.2E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 360 51.871 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 Pfam PF00266 Aminotransferase class-V 6 349 1.9E-49 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 6 360 1.8E-166 T 29-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AM474_RS05065 a30c261c0313c31cacf44c22cbc5d88b 361 SUPERFAMILY SSF53383 4 359 1.64E-117 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS03825 1b70562bdb0d066a08ab4059cd543481 443 SUPERFAMILY SSF53474 3 192 1.5E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03825 1b70562bdb0d066a08ab4059cd543481 443 Gene3D G3DSA:3.40.50.1820 2 390 2.3E-13 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 Gene3D G3DSA:2.40.170.20 259 801 8.1E-79 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 Gene3D G3DSA:2.170.130.10 105 258 1.0E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 SMART SM00965 47 97 2.8E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 Pfam PF00593 TonB dependent receptor 341 801 8.5E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 149 250 3.2E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 SUPERFAMILY SSF56935 141 801 1.9E-125 T 29-03-2018 AM474_RS10710 5f92dd8388e211e9b692bc3e5fe13fa6 802 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 800 5.9E-108 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS32130 d4dcc7f8eadee3215d6610bbc54f283d 171 SUPERFAMILY SSF109854 15 161 2.75E-20 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AM474_RS32130 d4dcc7f8eadee3215d6610bbc54f283d 171 Pfam PF05163 DinB family 1 170 4.9E-41 T 29-03-2018 IPR007837 DNA damage-inducible protein DinB AM474_RS32130 d4dcc7f8eadee3215d6610bbc54f283d 171 Gene3D G3DSA:1.20.120.450 13 164 7.3E-15 T 29-03-2018 AM474_RS20845 32ffd81aa453052f3341299191c1a718 210 PIRSF PIRSF006324 2 209 4.7E-55 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS20845 32ffd81aa453052f3341299191c1a718 210 Pfam PF01810 LysE type translocator 12 206 8.3E-37 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 100 4.7E-10 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 Pfam PF01106 NifU-like domain 114 180 2.3E-21 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 Gene3D G3DSA:2.60.300.12 1 102 4.1E-16 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 Gene3D G3DSA:3.30.300.130 105 190 9.3E-28 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF89360 3 100 1.57E-19 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 42.281 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 3.0E-28 T 29-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 SUPERFAMILY SSF117916 98 188 3.05E-26 T 29-03-2018 IPR034904 Fe-S cluster assembly domain AM474_RS28525 67ab129867d0761b776a0d2b1f698782 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 6.8E-96 T 29-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 AM474_RS27925 0b55afd6bf8a4d5d6577eb2eda76e5d4 332 Gene3D G3DSA:2.120.10.30 22 109 0.0043 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27925 0b55afd6bf8a4d5d6577eb2eda76e5d4 332 Gene3D G3DSA:2.120.10.30 114 306 2.0E-17 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27925 0b55afd6bf8a4d5d6577eb2eda76e5d4 332 SUPERFAMILY SSF63829 39 302 1.77E-27 T 29-03-2018 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SUPERFAMILY SSF52172 443 563 2.85E-21 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SMART SM00388 202 267 2.2E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SUPERFAMILY SSF55785 30 155 2.97E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Gene3D G3DSA:3.30.450.20 38 182 1.2E-18 T 29-03-2018 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SMART SM00387 311 422 1.2E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 420 6.7E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Gene3D G3DSA:3.30.565.10 271 429 5.5E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SMART SM00448 445 557 2.0E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 4.2E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 164 2.7E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Pfam PF00072 Response regulator receiver domain 448 557 1.2E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Gene3D G3DSA:3.30.450.20 183 206 0.091 T 29-03-2018 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Gene3D G3DSA:3.40.50.2300 440 570 2.9E-19 T 29-03-2018 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Pfam PF13188 PAS domain 44 91 2.6E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 Gene3D G3DSA:1.10.287.130 207 263 8.8E-8 T 29-03-2018 AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SUPERFAMILY SSF55874 257 422 1.11E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29275 576aa88a5ebbdd207699aee057033b45 594 SUPERFAMILY SSF47384 185 266 2.94E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23135 52d597b6e1778f39c9d71ddbdcd35605 370 SUPERFAMILY SSF53187 145 363 6.95E-43 T 29-03-2018 AM474_RS23135 52d597b6e1778f39c9d71ddbdcd35605 370 SUPERFAMILY SSF53187 18 109 6.95E-43 T 29-03-2018 AM474_RS23135 52d597b6e1778f39c9d71ddbdcd35605 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 145 357 1.4E-16 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM474_RS23135 52d597b6e1778f39c9d71ddbdcd35605 370 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 109 1.2E-8 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM474_RS23135 52d597b6e1778f39c9d71ddbdcd35605 370 Gene3D G3DSA:3.40.630.10 24 315 3.0E-23 T 29-03-2018 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 SUPERFAMILY SSF53720 8 420 6.02E-122 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Gene3D G3DSA:3.40.605.10 245 421 6.5E-43 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 410 5.6E-159 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Gene3D G3DSA:3.40.605.10 3 244 2.0E-46 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 PIRSF PIRSF000151 1 421 3.6E-182 T 29-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Pfam PF00171 Aldehyde dehydrogenase family 14 283 4.3E-14 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Pfam PF00171 Aldehyde dehydrogenase family 311 377 1.0E-5 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 327 349 - T 29-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS09905 9496bab6c1fc4f477d98ea6f2bcbaa21 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 420 42.798 T 29-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.922 T 29-03-2018 IPR033747 Class I PurE AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 SUPERFAMILY SSF52255 4 160 3.4E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Gene3D G3DSA:3.40.50.7700 1 160 2.9E-65 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 Pfam PF00731 AIR carboxylase 5 152 5.2E-64 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 PIRSF PIRSF001338 1 161 6.9E-66 T 29-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 SMART SM01001 3 154 3.4E-102 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM474_RS15645 5ca13609e1a3a8b761c3ffb76e5ec6a8 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 1.4E-67 T 29-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM474_RS31265 3ac67f33145661bc9414a466e546b05b 186 SUPERFAMILY SSF69118 1 183 1.14E-46 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS31265 3ac67f33145661bc9414a466e546b05b 186 Gene3D G3DSA:1.20.5.810 10 42 5.4E-12 T 29-03-2018 AM474_RS31265 3ac67f33145661bc9414a466e546b05b 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 43 108 3.2E-10 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS31265 3ac67f33145661bc9414a466e546b05b 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 63 105 7.5E-9 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS31265 3ac67f33145661bc9414a466e546b05b 186 Gene3D G3DSA:1.20.1290.10 43 180 2.9E-23 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 2.0E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.0E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 2.0E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 2.0E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 2.0E-36 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 Pfam PF00361 Proton-conducting membrane transporter 134 433 2.9E-72 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01085 4fa8abeb1f3c4880a421174419a847bc 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 497 1.1E-175 T 29-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS03010 8348778dd710a168dbbb6b32d48d1338 182 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 78 182 2.3E-42 T 29-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 AM474_RS03010 8348778dd710a168dbbb6b32d48d1338 182 Pfam PF11072 Protein of unknown function (DUF2859) 34 180 3.9E-54 T 29-03-2018 IPR021300 Integrating conjugative element protein, PFL4695 AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 SUPERFAMILY SSF52540 12 203 1.53E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 203 1.3E-68 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 26 1.6E-9 T 29-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 PIRSF PIRSF015617 6 203 2.4E-71 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 203 6.1E-59 T 29-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AM474_RS25425 5ceec8146b243e5dbbbd6b02170d9dd4 203 Gene3D G3DSA:3.40.50.300 11 203 6.8E-70 T 29-03-2018 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 Pfam PF00561 alpha/beta hydrolase fold 35 143 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 3.0E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 3.0E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 3.0E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 3.0E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 Gene3D G3DSA:3.40.50.1820 3 265 2.2E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 SUPERFAMILY SSF53474 8 262 3.8E-59 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12285 4df0a4199d01e4a34b061fa11a6181d7 265 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 15 262 2.6E-80 T 29-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 AM474_RS04715 bdcd80e7a362e5eef53284526546aeeb 382 PIRSF PIRSF015761 36 382 3.5E-48 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM474_RS04715 bdcd80e7a362e5eef53284526546aeeb 382 Pfam PF05134 Type II secretion system (T2SS), protein L 7 222 6.1E-57 T 29-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain AM474_RS04715 bdcd80e7a362e5eef53284526546aeeb 382 Pfam PF12693 GspL periplasmic domain 226 381 8.9E-46 T 29-03-2018 IPR025691 GspL periplasmic domain AM474_RS04715 bdcd80e7a362e5eef53284526546aeeb 382 SUPERFAMILY SSF53067 6 139 7.51E-26 T 29-03-2018 AM474_RS04715 bdcd80e7a362e5eef53284526546aeeb 382 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 7 381 1.6E-107 T 29-03-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 AM474_RS28400 e56d6c0032d2a56a28eef3e64b735acc 259 Pfam PF01925 Sulfite exporter TauE/SafE 15 249 6.7E-41 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS24890 5e2f7a3acae4fa59353d4d3d78fa2193 165 Pfam PF10263 SprT-like family 10 111 3.6E-19 T 29-03-2018 IPR006640 SprT-like AM474_RS24890 5e2f7a3acae4fa59353d4d3d78fa2193 165 SMART SM00731 7 159 9.7E-62 T 29-03-2018 IPR006640 SprT-like AM474_RS24890 5e2f7a3acae4fa59353d4d3d78fa2193 165 Hamap MF_00746 Protein SprT [sprT]. 3 159 36.608 T 29-03-2018 IPR023483 Uncharacterised protein family SprT AM474_RS24890 5e2f7a3acae4fa59353d4d3d78fa2193 165 Pfam PF17283 SprT-like zinc ribbon domain 118 159 6.5E-10 T 29-03-2018 IPR035240 SprT-like, zinc ribbon domain AM474_RS08275 1d3cf5d01555b901d4279792804c31d7 350 SUPERFAMILY SSF52540 25 292 8.5E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08275 1d3cf5d01555b901d4279792804c31d7 350 Pfam PF00437 Type II/IV secretion system protein 27 294 1.4E-78 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS08275 1d3cf5d01555b901d4279792804c31d7 350 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 314 7.7E-120 T 29-03-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 AM474_RS08275 1d3cf5d01555b901d4279792804c31d7 350 Gene3D G3DSA:3.40.50.300 147 305 5.5E-12 T 29-03-2018 AM474_RS08275 1d3cf5d01555b901d4279792804c31d7 350 Gene3D G3DSA:3.30.450.90 19 123 1.9E-18 T 29-03-2018 AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 Pfam PF13177 DNA polymerase III, delta subunit 20 159 2.1E-45 T 29-03-2018 AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 Gene3D G3DSA:1.20.272.10 208 327 1.2E-16 T 29-03-2018 AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 199 1.6E-65 T 29-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 321 5.4E-8 T 29-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 SUPERFAMILY SSF52540 5 203 4.0E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04005 456541ee9c39aa4c3d1669aa3f5443d2 328 Gene3D G3DSA:3.40.50.300 8 163 6.1E-28 T 29-03-2018 AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 SUPERFAMILY SSF52172 5 190 9.6E-45 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 SMART SM01012 135 190 4.2E-15 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 Gene3D G3DSA:1.10.10.10 154 191 5.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 PIRSF PIRSF036382 2 196 5.8E-51 T 29-03-2018 IPR008327 Signal transduction response regulator, antiterminator AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 Pfam PF03861 ANTAR domain 137 190 5.0E-14 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AM474_RS06155 2d082550262fe576e9c7fa1872ab3612 196 Gene3D G3DSA:3.40.50.2300 10 153 7.6E-6 T 29-03-2018 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PIRSF PIRSF001336 1 636 2.9E-250 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF51419 75 352 1.23E-67 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 14 636 3.9E-276 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 107 125 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 SUPERFAMILY SSF50621 459 567 1.81E-6 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 350 1.5E-43 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 12 636 41.846 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 468 489 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 546 567 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 153 168 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 179 200 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 493 518 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 203 225 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 99 113 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 75 90 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01180 Arginine decarboxylase signature 330 347 5.1E-69 T 29-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:2.40.37.10 404 584 8.2E-66 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:2.40.37.10 6 89 1.5E-17 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 130 142 2.4E-16 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.4E-16 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 125 2.4E-16 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.4E-16 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 2.4E-16 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 282 297 - T 29-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AM474_RS19020 2b3b664b3ddbaa450286e18ab7433d74 636 Gene3D G3DSA:3.20.20.10 90 352 4.7E-41 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS12345 c4650ee412636ec177ec4f069aeab7d1 316 PIRSF PIRSF026412 1 316 9.0E-123 T 29-03-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 AM474_RS12345 c4650ee412636ec177ec4f069aeab7d1 316 Gene3D G3DSA:2.120.10.30 15 107 1.4E-6 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS12345 c4650ee412636ec177ec4f069aeab7d1 316 Gene3D G3DSA:2.120.10.30 242 305 0.034 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS12345 c4650ee412636ec177ec4f069aeab7d1 316 Gene3D G3DSA:2.120.10.30 108 241 4.2E-16 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS12345 c4650ee412636ec177ec4f069aeab7d1 316 SUPERFAMILY SSF101898 31 274 2.12E-31 T 29-03-2018 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 Gene3D G3DSA:3.40.190.10 95 226 4.7E-17 T 29-03-2018 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 SUPERFAMILY SSF53850 101 291 6.52E-27 T 29-03-2018 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 Gene3D G3DSA:1.10.10.10 7 94 7.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 3.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 Pfam PF03466 LysR substrate binding domain 101 288 1.4E-28 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 SUPERFAMILY SSF46785 6 119 1.74E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24630 a343ccaba3fb008e6622d8829d2149ec 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32105 e093facd347178d0047dc59838358d5c 339 SMART SM00829 11 335 2.1E-13 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS32105 e093facd347178d0047dc59838358d5c 339 Gene3D G3DSA:3.90.180.10 1 140 1.3E-28 T 29-03-2018 AM474_RS32105 e093facd347178d0047dc59838358d5c 339 Gene3D G3DSA:3.40.50.720 141 321 1.4E-27 T 29-03-2018 AM474_RS32105 e093facd347178d0047dc59838358d5c 339 Pfam PF13602 Zinc-binding dehydrogenase 189 335 2.7E-17 T 29-03-2018 AM474_RS32105 e093facd347178d0047dc59838358d5c 339 SUPERFAMILY SSF50129 3 151 2.65E-28 T 29-03-2018 IPR011032 GroES-like AM474_RS32105 e093facd347178d0047dc59838358d5c 339 SUPERFAMILY SSF51735 119 274 4.99E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS32105 e093facd347178d0047dc59838358d5c 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 9.5E-8 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 1.9E-224 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 2.9E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.90.180.10 1 188 2.0E-61 T 29-03-2018 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 320 370 5.18E-11 T 29-03-2018 IPR011032 GroES-like AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SMART SM00829 11 368 2.3E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.90.180.10 307 370 2.9E-5 T 29-03-2018 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF50129 2 185 1.08E-72 T 29-03-2018 IPR011032 GroES-like AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Gene3D G3DSA:3.40.50.720 189 306 3.1E-26 T 29-03-2018 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 Pfam PF00107 Zinc-binding dehydrogenase 198 325 5.4E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS07505 8e9564a9cac7d4e23f9a1af9ecfc7911 370 SUPERFAMILY SSF51735 161 334 8.0E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03165 f12c314d861afba12601b66a8030483b 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 274 4.3E-126 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM474_RS03165 f12c314d861afba12601b66a8030483b 276 Gene3D G3DSA:3.40.50.1820 1 275 1.4E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03165 f12c314d861afba12601b66a8030483b 276 Pfam PF00756 Putative esterase 21 267 2.1E-64 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM474_RS03165 f12c314d861afba12601b66a8030483b 276 SUPERFAMILY SSF53474 1 275 5.1E-91 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 6.2E-258 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Pfam PF01380 SIS domain 291 418 3.4E-33 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Pfam PF01380 SIS domain 464 593 1.5E-25 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 SUPERFAMILY SSF53697 246 611 4.17E-118 T 29-03-2018 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Pfam PF13522 Glutamine amidotransferase domain 67 182 1.9E-20 T 29-03-2018 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Gene3D G3DSA:3.60.20.10 2 239 6.1E-67 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Gene3D G3DSA:3.40.50.10490 461 609 8.3E-48 T 29-03-2018 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 SUPERFAMILY SSF56235 2 235 2.57E-73 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Gene3D G3DSA:3.40.50.10490 240 460 2.3E-65 T 29-03-2018 AM474_RS14995 6ea3d458ed534df444b1ed8827acd75d 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.695 T 29-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 Gene3D G3DSA:3.55.50.10 98 189 5.5E-33 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 6.5E-208 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS14315 86222098fe2007882843a99159fbb69b 741 Gene3D G3DSA:2.40.50.230 370 452 1.7E-39 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS14315 86222098fe2007882843a99159fbb69b 741 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 2.0E-213 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS14315 86222098fe2007882843a99159fbb69b 741 SUPERFAMILY SSF69279 189 363 6.8E-37 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 529 552 2.5E-5 T 29-03-2018 IPR010609 Gp5, C-terminal AM474_RS14315 86222098fe2007882843a99159fbb69b 741 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 633 656 5.6E-5 T 29-03-2018 IPR010609 Gp5, C-terminal AM474_RS14315 86222098fe2007882843a99159fbb69b 741 SUPERFAMILY SSF69279 11 184 7.65E-64 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 SUPERFAMILY SSF69255 365 452 3.92E-35 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 SUPERFAMILY SSF69349 442 608 2.04E-48 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 Pfam PF05954 Phage late control gene D protein (GPD) 29 330 3.3E-105 T 29-03-2018 AM474_RS14315 86222098fe2007882843a99159fbb69b 741 SUPERFAMILY SSF69349 580 723 8.63E-24 T 29-03-2018 AM474_RS03910 5dbc249effaadf4a898afe1a0499f777 364 PIRSF PIRSF001361 14 364 5.1E-144 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS03910 5dbc249effaadf4a898afe1a0499f777 364 SUPERFAMILY SSF51569 28 359 7.22E-117 T 29-03-2018 AM474_RS03910 5dbc249effaadf4a898afe1a0499f777 364 Gene3D G3DSA:3.20.20.70 26 364 1.5E-111 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS03910 5dbc249effaadf4a898afe1a0499f777 364 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 27 360 3.4E-129 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS03910 5dbc249effaadf4a898afe1a0499f777 364 Pfam PF00793 DAHP synthetase I family 60 353 1.7E-78 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS13725 75ee2709fe8958aea9b1e388f3530816 230 Hamap MF_00650 Phosphoribosyl-dephospho-CoA transferase [mdcG]. 26 227 37.145 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM474_RS13725 75ee2709fe8958aea9b1e388f3530816 230 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 29 221 1.6E-57 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM474_RS13725 75ee2709fe8958aea9b1e388f3530816 230 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 29 222 9.9E-55 T 29-03-2018 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 99 596 2.4E-239 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:1.10.8.60 334 412 8.7E-24 T 29-03-2018 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 SUPERFAMILY SSF52540 145 393 7.98E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 SUPERFAMILY SSF140990 404 606 2.35E-77 T 29-03-2018 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF01434 Peptidase family M41 384 595 1.0E-81 T 29-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 625 37.77 T 29-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 29-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Gene3D G3DSA:3.40.50.300 134 333 2.1E-63 T 29-03-2018 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 9.8E-46 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 Pfam PF06480 FtsH Extracellular 5 91 1.2E-12 T 29-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AM474_RS19480 df0cdcf7573af69298f2bab61f0be212 639 SMART SM00382 186 325 6.4E-26 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 SUPERFAMILY SSF69304 496 702 1.7E-6 T 29-03-2018 AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Gene3D G3DSA:2.120.10.30 141 648 0.022 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Gene3D G3DSA:2.130.10.10 649 947 0.016 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 PRINTS PR00394 RHS protein signature 1112 1132 3.0E-15 T 29-03-2018 IPR001826 RHS protein AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 PRINTS PR00394 RHS protein signature 1059 1079 3.0E-15 T 29-03-2018 IPR001826 RHS protein AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 PRINTS PR00394 RHS protein signature 1135 1154 3.0E-15 T 29-03-2018 IPR001826 RHS protein AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1105 1168 1.1E-23 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Pfam PF05593 RHS Repeat 636 671 5.4E-6 T 29-03-2018 IPR031325 RHS repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Pfam PF05593 RHS Repeat 531 566 1.2E-6 T 29-03-2018 IPR031325 RHS repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Pfam PF05593 RHS Repeat 595 630 3.1E-6 T 29-03-2018 IPR031325 RHS repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Pfam PF05593 RHS Repeat 489 524 4.5E-8 T 29-03-2018 IPR031325 RHS repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 Pfam PF03527 RHS protein 1065 1101 1.9E-14 T 29-03-2018 IPR001826 RHS protein AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 594 634 2.1E-7 T 29-03-2018 IPR006530 YD repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 531 570 5.6E-8 T 29-03-2018 IPR006530 YD repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 669 5.5E-7 T 29-03-2018 IPR006530 YD repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 489 528 5.9E-7 T 29-03-2018 IPR006530 YD repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 367 399 7.5E-5 T 29-03-2018 IPR006530 YD repeat AM474_RS01275 b2dcf7d7e1dd5b6865f09052e11f913e 1317 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 381 415 9.9E-5 T 29-03-2018 IPR006530 YD repeat AM474_RS29690 61d862239fc0e3ab545a1523d9dbaf3e 91 SUPERFAMILY SSF56317 1 46 7.46E-14 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS29690 61d862239fc0e3ab545a1523d9dbaf3e 91 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 10 30 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM474_RS29690 61d862239fc0e3ab545a1523d9dbaf3e 91 Gene3D G3DSA:3.60.110.10 1 76 5.1E-12 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS29690 61d862239fc0e3ab545a1523d9dbaf3e 91 Pfam PF00795 Carbon-nitrogen hydrolase 1 39 9.7E-6 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 Pfam PF01134 Glucose inhibited division protein A 8 399 1.2E-169 T 29-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 Pfam PF13932 GidA associated domain 402 614 6.3E-77 T 29-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 622 42.535 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 620 1.6E-278 T 29-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 SMART SM01228 544 615 3.5E-42 T 29-03-2018 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 29-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.4E-5 T 29-03-2018 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 8.4E-5 T 29-03-2018 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 SUPERFAMILY SSF51905 97 261 1.04E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 SUPERFAMILY SSF51905 7 66 1.04E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14915 0a9e54a5afd2652cd7e75eefd11031c9 630 Gene3D G3DSA:3.50.50.60 5 264 1.5E-76 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10465 684fc83e131d938f3e853843a9a66494 268 Pfam PF01636 Phosphotransferase enzyme family 29 259 4.7E-35 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS10465 684fc83e131d938f3e853843a9a66494 268 Gene3D G3DSA:3.30.200.20 1 96 1.6E-20 T 29-03-2018 AM474_RS10465 684fc83e131d938f3e853843a9a66494 268 Gene3D G3DSA:3.90.1200.10 107 268 8.1E-19 T 29-03-2018 AM474_RS10465 684fc83e131d938f3e853843a9a66494 268 PIRSF PIRSF000706 3 268 4.0E-98 T 29-03-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 AM474_RS10465 684fc83e131d938f3e853843a9a66494 268 SUPERFAMILY SSF56112 14 267 3.06E-54 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.4E-20 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.340.30 19 117 2.0E-24 T 29-03-2018 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00525 186 206 5.2E-5 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.2E-4 T 29-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SMART SM00478 38 185 1.8E-59 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.768 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 SUPERFAMILY SSF48150 3 208 1.88E-73 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 TIGRFAM TIGR01083 nth: endonuclease III 5 194 2.6E-86 T 29-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 PIRSF PIRSF001435 1 212 1.3E-52 T 29-03-2018 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Pfam PF00633 Helix-hairpin-helix motif 100 127 7.1E-10 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM474_RS06890 e86adf6dd629f3aabff5ed9cbb0e7a6b 212 Gene3D G3DSA:1.10.1670.10 118 212 1.2E-30 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 302 19.295 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Gene3D G3DSA:3.30.2350.10 10 226 2.6E-85 T 29-03-2018 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 SUPERFAMILY SSF88697 245 303 1.54E-13 T 29-03-2018 IPR015947 PUA-like domain AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 3.1E-20 T 29-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 5.3E-57 T 29-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 SUPERFAMILY SSF55120 11 241 4.03E-84 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 302 2.0E-19 T 29-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 Gene3D G3DSA:2.30.130.10 244 304 1.2E-18 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS19535 227a0707d7c3a566441f93673c124465 304 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.7E-80 T 29-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS00995 3bdad92dc65e294eb2ae020afe5975df 141 Gene3D G3DSA:3.40.630.30 1 141 6.9E-32 T 29-03-2018 AM474_RS00995 3bdad92dc65e294eb2ae020afe5975df 141 Pfam PF13673 Acetyltransferase (GNAT) domain 24 138 3.3E-23 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS00995 3bdad92dc65e294eb2ae020afe5975df 141 SUPERFAMILY SSF55729 3 140 3.43E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS13795 ea068c537a1d3898e40dd06ad3a5e34a 299 SUPERFAMILY SSF51197 19 293 3.57E-69 T 29-03-2018 AM474_RS13795 ea068c537a1d3898e40dd06ad3a5e34a 299 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 20 291 4.6E-54 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS13795 ea068c537a1d3898e40dd06ad3a5e34a 299 Gene3D G3DSA:3.60.130.10 15 296 1.4E-66 T 29-03-2018 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 SUPERFAMILY SSF88946 11 102 3.77E-16 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 Pfam PF08281 Sigma-70, region 4 113 165 4.1E-14 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 Pfam PF04542 Sigma-70 region 2 17 81 7.9E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 Gene3D G3DSA:1.10.1740.10 6 86 8.2E-18 T 29-03-2018 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 Gene3D G3DSA:1.10.10.10 89 165 1.1E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 162 1.0E-20 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31985 058532d992decb69e6d57210e8c726c7 172 SUPERFAMILY SSF88659 91 165 3.36E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 Gene3D G3DSA:1.10.10.10 13 105 4.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 7.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 7.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 7.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 Gene3D G3DSA:3.40.190.10 106 192 2.8E-16 T 29-03-2018 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 Pfam PF03466 LysR substrate binding domain 103 308 3.9E-34 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 SUPERFAMILY SSF46785 16 127 2.88E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 2.9E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 SUPERFAMILY SSF53850 105 312 9.59E-29 T 29-03-2018 AM474_RS17445 0260e88c2a1aee615efe3b1af7da4dd9 318 Gene3D G3DSA:3.40.190.10 193 280 2.5E-11 T 29-03-2018 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 PIRSF PIRSF000388 2 266 1.5E-97 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 SUPERFAMILY SSF51621 4 264 1.94E-101 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 41.269 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 1.2E-105 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 Gene3D G3DSA:3.20.20.60 1 264 2.0E-78 T 29-03-2018 AM474_RS19605 47c6aff6252669f9073a300921ffc100 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 6.8E-100 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS04650 2b975243ffc49f60d592a9f7e626b120 286 SUPERFAMILY SSF144091 82 285 7.32E-36 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM474_RS04650 2b975243ffc49f60d592a9f7e626b120 286 Gene3D G3DSA:1.20.1540.10 82 279 2.2E-31 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM474_RS04650 2b975243ffc49f60d592a9f7e626b120 286 Pfam PF16733 Rhomboid N-terminal domain 2 68 2.7E-32 T 29-03-2018 IPR031976 Rhomboid protease, N-terminal AM474_RS04650 2b975243ffc49f60d592a9f7e626b120 286 Pfam PF01694 Rhomboid family 136 277 8.7E-30 T 29-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 16.08 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 Pfam PF02609 Exonuclease VII small subunit 9 60 4.8E-20 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 3.0E-11 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 SUPERFAMILY SSF116842 3 68 4.18E-21 T 29-03-2018 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 Gene3D G3DSA:1.10.287.1040 6 73 4.1E-24 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 PIRSF PIRSF006488 1 80 1.7E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS10080 6b217a10f7fda159a50473a7c2a6e6d4 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 7.4E-22 T 29-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54211 81 160 7.33E-26 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 29-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 2.6E-65 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.768 T 29-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 75 7.0E-27 T 29-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 SUPERFAMILY SSF54768 10 77 1.05E-22 T 29-03-2018 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.160.20 12 73 7.5E-25 T 29-03-2018 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 158 8.7E-31 T 29-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM474_RS11085 fc08e04c3799517c32a377844260ffc9 166 Gene3D G3DSA:3.30.230.10 77 166 1.1E-31 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1039 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:3.30.70.1440 676 770 8.9E-21 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:3.30.70.1430 40 142 1.5E-27 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82714 185 273 3.27E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 137 184 4.45E-25 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 276 332 4.45E-25 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Pfam PF00873 AcrB/AcrD/AcrF family 4 1031 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82866 835 1030 4.19E-43 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 812 861 8.89E-27 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 676 725 8.89E-27 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 569 675 7.59E-25 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82714 726 811 4.71E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82866 298 499 6.67E-51 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 625 639 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.7E-84 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:3.30.70.1430 573 672 2.4E-17 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:3.30.70.1320 771 848 5.3E-6 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 SUPERFAMILY SSF82693 40 134 1.15E-27 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:1.20.1640.10 849 1032 9.5E-39 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:1.20.1640.10 278 500 8.2E-50 T 29-03-2018 AM474_RS06935 03c0502c74d4f73b24bc1cdf8bddaf03 1053 Gene3D G3DSA:3.30.2090.10 183 277 5.4E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS01265 84f7d41e6f5c5a83daf4f10c707d6fb9 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 306 2.9E-82 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS01265 84f7d41e6f5c5a83daf4f10c707d6fb9 320 Gene3D G3DSA:3.40.50.1100 17 160 1.7E-41 T 29-03-2018 AM474_RS01265 84f7d41e6f5c5a83daf4f10c707d6fb9 320 SUPERFAMILY SSF53686 6 313 1.06E-97 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS01265 84f7d41e6f5c5a83daf4f10c707d6fb9 320 Gene3D G3DSA:3.40.50.1100 161 320 2.2E-38 T 29-03-2018 AM474_RS20560 d5d04df6c8387db7f9cd224dcbc8dd24 314 Pfam PF02401 LytB protein 3 283 1.5E-92 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM474_RS20560 d5d04df6c8387db7f9cd224dcbc8dd24 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.006 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM474_RS20560 d5d04df6c8387db7f9cd224dcbc8dd24 314 Gene3D G3DSA:3.40.50.720 106 246 0.01 T 29-03-2018 AM474_RS20560 d5d04df6c8387db7f9cd224dcbc8dd24 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 5.2E-100 T 29-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM474_RS23125 73c909924871aaac24fb4ce6acdc0411 229 Gene3D G3DSA:1.10.3720.10 2 224 9.4E-38 T 29-03-2018 AM474_RS23125 73c909924871aaac24fb4ce6acdc0411 229 SUPERFAMILY SSF161098 9 206 5.76E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS23125 73c909924871aaac24fb4ce6acdc0411 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 220 2.3E-22 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS23125 73c909924871aaac24fb4ce6acdc0411 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 6.8E-20 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS20590 7b34f6d100a79aa4c44ad1a81d5b5534 174 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 5 151 4.5E-39 T 29-03-2018 IPR013362 Pilus modification type IV, PilV AM474_RS20590 7b34f6d100a79aa4c44ad1a81d5b5534 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 6.6E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20590 7b34f6d100a79aa4c44ad1a81d5b5534 174 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.9E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS05335 7e6d33516885fd7883be750b388595b3 463 Gene3D G3DSA:3.30.70.1230 219 416 3.1E-59 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS05335 7e6d33516885fd7883be750b388595b3 463 SUPERFAMILY SSF55073 221 410 1.21E-61 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS05335 7e6d33516885fd7883be750b388595b3 463 SMART SM00044 188 398 2.0E-34 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS05335 7e6d33516885fd7883be750b388595b3 463 Pfam PF05230 MASE2 domain 19 108 1.9E-29 T 29-03-2018 IPR007894 MASE2 AM474_RS05335 7e6d33516885fd7883be750b388595b3 463 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 407 1.2E-39 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS14750 5385aa3ffa196a7f316a6852f6814a19 185 Pfam PF01300 Telomere recombination 13 184 4.8E-43 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM474_RS14750 5385aa3ffa196a7f316a6852f6814a19 185 Gene3D G3DSA:3.90.870.10 4 183 8.6E-52 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS14750 5385aa3ffa196a7f316a6852f6814a19 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 183 38.39 T 29-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 AM474_RS14750 5385aa3ffa196a7f316a6852f6814a19 185 SUPERFAMILY SSF55821 7 184 1.46E-52 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 78 9.4E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 Gene3D G3DSA:1.10.10.60 21 65 1.1E-16 T 29-03-2018 AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 Gene3D G3DSA:1.10.10.60 66 162 1.0E-8 T 29-03-2018 AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 8.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 8.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00590 e460e6cde436cecdd90441128270ce7f 207 SUPERFAMILY SSF46689 25 83 2.96E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29095 31cf48a4003949f6613933c8e0aca8e0 175 SUPERFAMILY SSF52540 2 169 1.05E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29095 31cf48a4003949f6613933c8e0aca8e0 175 Pfam PF13521 AAA domain 5 160 2.2E-30 T 29-03-2018 AM474_RS29095 31cf48a4003949f6613933c8e0aca8e0 175 Gene3D G3DSA:3.40.50.300 1 165 5.6E-19 T 29-03-2018 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-58 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF54826 3 138 1.69E-56 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01193 4 134 2.0E-92 T 29-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PIRSF PIRSF001400 1 429 1.2E-192 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 367 384 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 107 123 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 37 51 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 165 178 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 338 352 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 PRINTS PR00148 Enolase signature 315 326 1.2E-44 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.30.390.10 3 127 5.0E-52 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.7E-205 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SUPERFAMILY SSF51604 143 427 3.14E-129 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 29-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Gene3D G3DSA:3.20.20.120 128 428 1.4E-105 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 SMART SM01192 143 429 1.2E-221 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 426 1.9E-137 T 29-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS07535 f8037c3f3a86fdfb4f6e6b4ae5c16036 429 Hamap MF_00318 Enolase [eno]. 2 415 44.578 T 29-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 742 1.7E-87 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 Pfam PF00593 TonB dependent receptor 273 740 4.3E-55 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 SUPERFAMILY SSF56935 50 742 1.31E-130 T 29-03-2018 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 725 742 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 2.0E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 Gene3D G3DSA:2.40.170.20 192 742 1.5E-82 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS23365 e6de53fc0047ab1376c6640dc5851361 742 Gene3D G3DSA:2.170.130.10 56 191 3.7E-36 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:3.40.50.280 749 902 8.0E-54 T 29-03-2018 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SUPERFAMILY SSF82282 15 406 1.31E-116 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 PIRSF PIRSF000381 8 1203 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:3.20.20.330 9 344 3.8E-114 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:1.10.1240.10 651 745 2.9E-36 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SUPERFAMILY SSF47644 657 744 3.66E-28 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:3.20.20.20 352 650 3.4E-70 T 29-03-2018 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 946 1216 2.6E-122 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 TIGRFAM TIGR02082 metH: methionine synthase 20 1200 0.0 T 29-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SMART SM01018 662 745 7.7E-40 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SUPERFAMILY SSF56507 909 1233 1.07E-126 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:3.10.196.10 964 1088 6.5E-46 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Gene3D G3DSA:3.10.196.10 1089 1234 3.6E-62 T 29-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Pfam PF02310 B12 binding domain 754 847 1.9E-19 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Pfam PF02607 B12 binding domain 664 737 2.4E-24 T 29-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Pfam PF00809 Pterin binding enzyme 367 605 4.0E-56 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 Pfam PF02574 Homocysteine S-methyltransferase 24 332 9.6E-79 T 29-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SUPERFAMILY SSF51717 363 636 2.22E-87 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS28505 a84ed19d1f66b7b131fca1d9a8793134 1234 SUPERFAMILY SSF52242 748 900 3.01E-44 T 29-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AM474_RS29760 6ddf65010a25ba967ecbadeea5b9a0bc 169 SUPERFAMILY SSF54427 7 160 2.16E-36 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS29760 6ddf65010a25ba967ecbadeea5b9a0bc 169 Gene3D G3DSA:3.10.450.50 9 168 1.5E-23 T 29-03-2018 AM474_RS29760 6ddf65010a25ba967ecbadeea5b9a0bc 169 Pfam PF00866 Ring hydroxylating beta subunit 23 160 1.3E-38 T 29-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 606 5.9E-134 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 Pfam PF02355 Protein export membrane protein 443 606 1.9E-17 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 619 50.117 T 29-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 Pfam PF13721 SecD export protein N-terminal TM region 2 104 8.5E-34 T 29-03-2018 IPR027398 SecD export protein N-terminal TM domain AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 SUPERFAMILY SSF82866 325 346 2.09E-42 T 29-03-2018 AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 SUPERFAMILY SSF82866 416 611 2.09E-42 T 29-03-2018 AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 Pfam PF07549 SecD/SecF GG Motif 117 141 4.1E-6 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 343 599 7.0E-70 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS08805 3b11f888fbee436d88c3300e3330c123 620 Gene3D G3DSA:1.20.1640.10 377 611 1.7E-32 T 29-03-2018 AM474_RS23755 90b334d1d18ef83041af82f7b4ebb0b4 149 SUPERFAMILY SSF55729 1 149 6.28E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS23755 90b334d1d18ef83041af82f7b4ebb0b4 149 Gene3D G3DSA:3.40.630.30 1 86 1.2E-10 T 29-03-2018 AM474_RS23755 90b334d1d18ef83041af82f7b4ebb0b4 149 Gene3D G3DSA:3.40.630.30 87 149 1.9E-11 T 29-03-2018 AM474_RS23755 90b334d1d18ef83041af82f7b4ebb0b4 149 Pfam PF13673 Acetyltransferase (GNAT) domain 30 139 2.2E-14 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 SUPERFAMILY SSF46785 15 86 4.17E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 SMART SM00346 15 104 1.7E-12 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 Gene3D G3DSA:1.10.10.10 1 76 3.6E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 Gene3D G3DSA:3.30.450.40 87 265 3.9E-28 T 29-03-2018 IPR029016 GAF domain-like AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 Pfam PF01614 Bacterial transcriptional regulator 134 253 3.2E-10 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 Pfam PF09339 IclR helix-turn-helix domain 17 65 1.4E-12 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS23920 c9ffd6f220da8f6b0c82b37e1d88fcba 266 SUPERFAMILY SSF55781 73 255 6.54E-26 T 29-03-2018 IPR029016 GAF domain-like AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 SUPERFAMILY SSF52518 5 320 7.23E-122 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 29-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 333 9.1E-166 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Gene3D G3DSA:3.40.50.920 541 662 4.0E-28 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 8.4E-16 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 SUPERFAMILY SSF52518 347 526 1.01E-67 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 SMART SM00861 354 525 1.3E-69 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 525 1.3E-45 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 SUPERFAMILY SSF52922 533 664 1.83E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Gene3D G3DSA:3.40.50.970 364 540 1.2E-42 T 29-03-2018 AM474_RS11940 53a9e3fefd9bd056e9051ff59be6a7d9 665 Gene3D G3DSA:3.40.50.970 1 363 1.5E-126 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.8E-13 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 4.8E-13 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.8E-13 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.8E-13 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PIRSF PIRSF037149 1 815 0.0 T 29-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 122 252 3.6E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF51905 2 306 7.07E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 772 4.9E-27 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 798 1.1E-286 T 29-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 625 1.4E-14 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF55124 522 642 4.91E-25 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 1.8E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 1.8E-7 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 253 314 9.7E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 488 538 3.6E-15 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 7.7E-14 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 8.9E-20 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-20 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 8.9E-20 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.9E-20 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 8.9E-20 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 SUPERFAMILY SSF56014 634 800 3.27E-50 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.30.413.10 632 808 3.7E-37 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.90.480.10 380 627 1.0E-16 T 29-03-2018 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 3.2E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28145 e4d4a416dc4c3b5e6b05f98ed4109dbb 816 Gene3D G3DSA:3.50.50.60 2 121 4.0E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09985 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 TIGRFAM TIGR00908 2A0305: ethanolamine permease 26 470 7.2E-220 T 29-03-2018 IPR004757 Ethanolamine permease AM474_RS09985 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 Pfam PF13520 Amino acid permease 63 451 6.2E-40 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS09985 4acb9c3b05bf16a6291a8db8eb0e6c3c 482 PIRSF PIRSF006060 11 479 3.4E-70 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 Pfam PF00186 Dihydrofolate reductase 5 167 9.7E-55 T 29-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 100 114 6.8E-16 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 30 38 6.8E-16 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 16 26 6.8E-16 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 PRINTS PR00070 Dihydrofolate reductase signature 43 54 6.8E-16 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 29-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 Gene3D G3DSA:3.40.430.10 41 168 5.4E-37 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 Gene3D G3DSA:3.40.430.10 1 40 1.3E-12 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 SUPERFAMILY SSF53597 4 168 2.11E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS12970 21b0c7617b286ab416ea7f6d54fecf47 168 PIRSF PIRSF000194 1 168 1.1E-58 T 29-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 PIRSF PIRSF036431 9 631 3.4E-206 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AM474_RS25755 54a9296722e76010df5813936ba640e6 633 SUPERFAMILY SSF103190 80 204 1.67E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS25755 54a9296722e76010df5813936ba640e6 633 SMART SM00388 407 475 1.7E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 SUPERFAMILY SSF55874 478 624 3.54E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 409 472 4.8E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Gene3D G3DSA:1.10.287.130 378 471 2.2E-7 T 29-03-2018 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 5.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 5.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 5.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Pfam PF02743 Cache domain 53 238 1.0E-19 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Gene3D G3DSA:3.30.565.10 477 629 1.5E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 622 3.5E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25755 54a9296722e76010df5813936ba640e6 633 SMART SM00387 514 624 1.6E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS25755 54a9296722e76010df5813936ba640e6 633 SUPERFAMILY SSF47384 396 473 7.85E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Gene3D G3DSA:3.30.450.20 73 183 9.6E-22 T 29-03-2018 AM474_RS25755 54a9296722e76010df5813936ba640e6 633 Gene3D G3DSA:3.30.450.20 184 318 2.6E-11 T 29-03-2018 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:2.60.40.10 339 444 4.8E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 ProSitePatterns PS01095 Chitinases family 18 active site. 135 143 - T 29-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:2.10.10.20 445 481 3.5E-10 T 29-03-2018 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF51055 438 481 5.1E-14 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 SMART SM00060 343 417 3.6E-6 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF51445 25 321 7.0E-47 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 Pfam PF00704 Glycosyl hydrolases family 18 29 311 2.7E-27 T 29-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 SMART SM00495 436 482 2.7E-4 T 29-03-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 Gene3D G3DSA:3.20.20.80 22 337 2.2E-41 T 29-03-2018 AM474_RS31110 6665d5e885674ab10eaee5752476e78c 483 SUPERFAMILY SSF49265 342 427 4.43E-11 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM474_RS21295 d23a2dd63695431d8c931cd4ceeae15d 97 Hamap MF_00910 Cell division protein FtsL [ftsL]. 12 95 15.538 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM474_RS21295 d23a2dd63695431d8c931cd4ceeae15d 97 Pfam PF04999 Cell division protein FtsL 1 96 2.1E-32 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM474_RS21295 d23a2dd63695431d8c931cd4ceeae15d 97 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 13 95 9.3E-24 T 29-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 702 745 4.76E-9 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00436 138 226 1.5E-50 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 636 8.4E-250 T 29-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 826 865 6.7E-20 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF08272 Topoisomerase I zinc-ribbon-like 760 795 1.7E-11 T 29-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 111 124 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 3.6E-37 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF56712 3 612 4.32E-202 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 811 867 1.07E-23 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.460.10 473 587 1.9E-24 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:1.10.460.10 169 348 2.7E-47 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.70.20.10 351 472 1.8E-37 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01131 DNA topoisomerase 162 569 2.3E-128 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01751 Toprim domain 5 147 2.3E-32 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00493 3 137 7.2E-31 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:2.20.25.10 811 865 7.6E-30 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 748 809 1.1E-9 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 698 747 9.0E-12 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.30.65.10 588 651 3.7E-12 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 314 328 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Gene3D G3DSA:3.40.50.140 1 168 4.9E-50 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 712 747 1.3E-11 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 625 2.5E-4 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SUPERFAMILY SSF57783 746 806 1.7E-16 T 29-03-2018 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 SMART SM00437 277 532 5.6E-119 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM474_RS04265 766c40ef3a3dc288f6b4f68dbaa5c473 868 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 725 58.964 T 29-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 196 1.1E-50 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 62 76 9.5E-6 T 29-03-2018 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 37 53 9.5E-6 T 29-03-2018 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 128 140 9.5E-6 T 29-03-2018 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 Gene3D G3DSA:3.40.50.150 6 198 2.2E-39 T 29-03-2018 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 PIRSF PIRSF004553 17 198 5.5E-48 T 29-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 Pfam PF03602 Conserved hypothetical protein 95 18 195 4.1E-59 T 29-03-2018 AM474_RS12860 115225bfe9336b6e35b42c7da41127b9 198 SUPERFAMILY SSF53335 18 195 1.67E-49 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 Pfam PF08238 Sel1 repeat 184 214 1.5 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 Pfam PF08238 Sel1 repeat 77 112 0.0021 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SMART SM00671 114 149 310.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SMART SM00671 150 182 110.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SMART SM00671 183 215 2.1 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SMART SM00671 76 113 0.0074 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SUPERFAMILY SSF81901 135 227 4.45E-13 T 29-03-2018 AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 Gene3D G3DSA:2.60.40.1180 58 132 2.1E-12 T 29-03-2018 AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 Gene3D G3DSA:2.60.40.1180 133 162 0.15 T 29-03-2018 AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 Gene3D G3DSA:2.60.40.1180 163 228 2.6E-5 T 29-03-2018 AM474_RS17430 02395c5fc5523d5d0bf64da2114e6390 291 SUPERFAMILY SSF81901 40 162 2.09E-19 T 29-03-2018 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Hamap MF_00195 GTPase Der [der]. 2 456 38.055 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 453 1.1E-173 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 363 6.3E-24 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 153 1.2E-20 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Gene3D G3DSA:3.30.300.20 387 454 1.0E-24 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 4.3E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.3E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Gene3D G3DSA:1.20.120.430 266 386 4.9E-13 T 29-03-2018 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Gene3D G3DSA:1.20.120.430 68 265 4.6E-47 T 29-03-2018 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Pfam PF01926 50S ribosome-binding GTPase 5 119 8.3E-28 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Pfam PF01926 50S ribosome-binding GTPase 199 317 2.8E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 373 453 4.9E-25 T 29-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 Gene3D G3DSA:1.20.120.430 2 67 4.8E-16 T 29-03-2018 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 PIRSF PIRSF006485 1 461 2.8E-171 T 29-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 SUPERFAMILY SSF52540 4 168 7.46E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 SUPERFAMILY SSF52540 195 459 4.09E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08695 ef87f640ddced1b1eaa76d880b3965bc 492 SUPERFAMILY SSF52540 137 166 4.09E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14695 d80c0675550cc2dd5570b4b29a101528 125 Pfam PF08883 Dopa 4,5-dioxygenase family 12 111 2.2E-33 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase AM474_RS14695 d80c0675550cc2dd5570b4b29a101528 125 Gene3D G3DSA:3.30.70.1240 3 113 1.6E-40 T 29-03-2018 IPR023389 DOPA-like domain AM474_RS14695 d80c0675550cc2dd5570b4b29a101528 125 PIRSF PIRSF028139 2 115 5.9E-47 T 29-03-2018 IPR014980 Dopa 4,5-dioxygenase AM474_RS14695 d80c0675550cc2dd5570b4b29a101528 125 SUPERFAMILY SSF143410 2 113 9.15E-45 T 29-03-2018 IPR023389 DOPA-like domain AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 PIRSF PIRSF002808 4 441 5.9E-77 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 Gene3D G3DSA:1.20.1250.20 14 211 3.1E-27 T 29-03-2018 AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 SUPERFAMILY SSF103473 13 427 1.57E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 Gene3D G3DSA:1.20.1250.20 239 434 3.9E-18 T 29-03-2018 AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 Pfam PF07690 Major Facilitator Superfamily 287 425 1.7E-9 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS27010 7fe6a223f4e29cd61229ababd5391c32 453 Pfam PF07690 Major Facilitator Superfamily 29 274 1.1E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS14045 9910b26eaf453b8a1141ec7923dfe80b 365 SUPERFAMILY SSF53822 174 245 5.18E-5 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS14045 9910b26eaf453b8a1141ec7923dfe80b 365 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 36 302 2.3E-52 T 29-03-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 AM474_RS14045 9910b26eaf453b8a1141ec7923dfe80b 365 Gene3D G3DSA:3.40.50.2300 151 365 1.8E-51 T 29-03-2018 AM474_RS14045 9910b26eaf453b8a1141ec7923dfe80b 365 Gene3D G3DSA:3.40.50.2300 33 150 1.8E-28 T 29-03-2018 AM474_RS14430 0266189c8a85df163de97fdd7ad07e5b 239 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS14430 0266189c8a85df163de97fdd7ad07e5b 239 SMART SM00382 30 225 1.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14430 0266189c8a85df163de97fdd7ad07e5b 239 Pfam PF00005 ABC transporter 26 176 7.5E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS14430 0266189c8a85df163de97fdd7ad07e5b 239 Gene3D G3DSA:3.40.50.300 2 225 1.3E-43 T 29-03-2018 AM474_RS14430 0266189c8a85df163de97fdd7ad07e5b 239 SUPERFAMILY SSF52540 26 212 3.64E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 PIRSF PIRSF006621 1 324 6.1E-75 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 Gene3D G3DSA:3.20.20.70 6 247 6.1E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 91 109 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 Pfam PF01207 Dihydrouridine synthase (Dus) 12 305 4.0E-83 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 325 50.874 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 SUPERFAMILY SSF51395 9 319 9.16E-73 T 29-03-2018 AM474_RS02590 3c207c0b7d57f03a256180e8f79ff307 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 8 323 3.7E-139 T 29-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 SMART SM01008 216 294 3.3E-23 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Gene3D G3DSA:3.30.365.10 331 430 4.8E-28 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 PIRSF PIRSF036389 6 731 2.0E-267 T 29-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 SUPERFAMILY SSF56003 14 249 8.72E-51 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Gene3D G3DSA:3.30.365.10 593 727 6.2E-33 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Gene3D G3DSA:3.90.1170.50 193 330 1.0E-36 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 SUPERFAMILY SSF56003 318 724 6.93E-117 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Gene3D G3DSA:3.30.365.10 25 192 1.3E-45 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Gene3D G3DSA:3.30.365.10 431 592 2.6E-41 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 320 560 2.9E-30 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 679 2.3E-15 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS28700 202ec3c571c08ea98b2d69cb00985580 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 25 194 4.0E-18 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS06780 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 35 131 3.53E-9 T 29-03-2018 AM474_RS06780 6f406665b324d8c41983b2acb767056a 286 SUPERFAMILY SSF103481 176 282 1.7E-9 T 29-03-2018 AM474_RS06780 6f406665b324d8c41983b2acb767056a 286 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 5.5E-90 T 29-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 AM474_RS06780 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 139 277 2.8E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS06780 6f406665b324d8c41983b2acb767056a 286 Pfam PF00892 EamA-like transporter family 3 128 1.1E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS11930 23294c78eaec8a7f8dc39b0f0237e9ad 265 Pfam PF01261 Xylose isomerase-like TIM barrel 21 217 1.5E-34 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS11930 23294c78eaec8a7f8dc39b0f0237e9ad 265 SUPERFAMILY SSF51658 1 258 5.5E-85 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS11930 23294c78eaec8a7f8dc39b0f0237e9ad 265 PIRSF PIRSF006241 1 262 1.1E-94 T 29-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AM474_RS11930 23294c78eaec8a7f8dc39b0f0237e9ad 265 Gene3D G3DSA:3.20.20.150 1 261 3.4E-59 T 29-03-2018 AM474_RS28605 bf78ea211c0a560525b583670b440deb 226 Gene3D G3DSA:1.10.3720.10 3 222 4.9E-34 T 29-03-2018 AM474_RS28605 bf78ea211c0a560525b583670b440deb 226 SUPERFAMILY SSF161098 5 216 9.94E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS28605 bf78ea211c0a560525b583670b440deb 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 217 1.6E-71 T 29-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AM474_RS28605 bf78ea211c0a560525b583670b440deb 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 215 3.7E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS10500 90918117f170f33d62632c9c2167a0de 434 Gene3D G3DSA:1.20.1250.20 16 224 5.5E-37 T 29-03-2018 AM474_RS10500 90918117f170f33d62632c9c2167a0de 434 Pfam PF07690 Major Facilitator Superfamily 30 392 2.5E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS10500 90918117f170f33d62632c9c2167a0de 434 SUPERFAMILY SSF103473 18 426 3.14E-81 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10500 90918117f170f33d62632c9c2167a0de 434 Gene3D G3DSA:1.20.1250.20 238 429 1.0E-23 T 29-03-2018 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 SUPERFAMILY SSF82866 203 392 3.53E-28 T 29-03-2018 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 PRINTS PR00702 Acriflavin resistance protein family signature 629 652 2.4E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 PRINTS PR00702 Acriflavin resistance protein family signature 756 779 2.4E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 PRINTS PR00702 Acriflavin resistance protein family signature 336 360 2.4E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 PRINTS PR00702 Acriflavin resistance protein family signature 681 705 2.4E-5 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 Gene3D G3DSA:1.20.1640.10 580 793 1.2E-34 T 29-03-2018 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 Gene3D G3DSA:1.20.1640.10 202 403 6.0E-26 T 29-03-2018 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 SUPERFAMILY SSF82866 584 787 1.7E-33 T 29-03-2018 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 Pfam PF03176 MMPL family 171 422 1.3E-7 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AM474_RS30540 1071280a80e04d6f0a8865200d27b5d6 800 Pfam PF03176 MMPL family 584 790 7.7E-16 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AM474_RS00925 1835951af902ddf850d1b3fb19ebdff6 226 SUPERFAMILY SSF55729 2 220 1.91E-93 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS00925 1835951af902ddf850d1b3fb19ebdff6 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 99.87 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM474_RS00925 1835951af902ddf850d1b3fb19ebdff6 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 203 1.9E-75 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM474_RS00925 1835951af902ddf850d1b3fb19ebdff6 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 215 2.4E-63 T 29-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 SUPERFAMILY SSF51735 1 246 6.41E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 Gene3D G3DSA:3.40.50.720 1 37 4.7E-7 T 29-03-2018 AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 Gene3D G3DSA:2.60.120.10 243 369 5.0E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 SUPERFAMILY SSF51182 238 365 4.25E-21 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 Gene3D G3DSA:3.40.50.720 38 143 7.9E-9 T 29-03-2018 AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 185 1.5E-17 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS04990 7281773d95a0cc68eecf6747f42494bb 372 Gene3D G3DSA:3.90.25.10 144 225 1.7E-9 T 29-03-2018 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 SMART SM00862 161 238 1.2E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 SMART SM00448 11 122 6.9E-44 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 3.5E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:3.40.50.2300 2 132 8.6E-40 T 29-03-2018 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 Gene3D G3DSA:1.10.10.10 134 245 3.2E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF52172 7 132 8.25E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 SUPERFAMILY SSF46894 140 240 6.52E-26 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS16830 9ea9dc4796be49889408ed925fba373f 247 Pfam PF00072 Response regulator receiver domain 13 123 3.8E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05005 fea541107c1fb8d54e2a3af1183674e8 334 Pfam PF00535 Glycosyl transferase family 2 4 111 2.1E-21 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS05005 fea541107c1fb8d54e2a3af1183674e8 334 SUPERFAMILY SSF53448 1 228 9.09E-38 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS05005 fea541107c1fb8d54e2a3af1183674e8 334 Gene3D G3DSA:3.90.550.10 1 252 9.9E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.2E-24 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:3.30.930.10 485 690 1.1E-39 T 29-03-2018 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Pfam PF03483 B3/4 domain 211 383 1.9E-70 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SMART SM00896 698 791 1.9E-46 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SUPERFAMILY SSF54991 692 791 2.09E-32 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:3.30.70.380 694 791 3.0E-27 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SUPERFAMILY SSF55681 467 683 1.04E-53 T 29-03-2018 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SMART SM00874 402 471 1.8E-27 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 2.3E-258 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SUPERFAMILY SSF50249 39 190 2.08E-49 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:2.40.50.140 38 141 1.6E-44 T 29-03-2018 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SMART SM00873 211 384 2.1E-95 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Pfam PF03484 tRNA synthetase B5 domain 405 471 4.6E-19 T 29-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:3.50.40.10 196 394 2.7E-72 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 7.5E-31 T 29-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SUPERFAMILY SSF46955 403 475 8.33E-18 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 SUPERFAMILY SSF56037 195 392 2.88E-74 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:3.30.56.10 142 183 6.6E-8 T 29-03-2018 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 46.896 T 29-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM474_RS01615 e46b2abb33f9132ce50ac58d2b0e792c 792 Gene3D G3DSA:3.30.56.10 402 475 7.8E-22 T 29-03-2018 AM474_RS31415 d2d6d094b126aaecc3ea215749e2db76 181 PIRSF PIRSF028301 1 175 6.1E-65 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS31415 d2d6d094b126aaecc3ea215749e2db76 181 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 163 1.4E-58 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS31415 d2d6d094b126aaecc3ea215749e2db76 181 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 160 4.1E-54 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS09125 2891068abcb2a1361b39c59dc2ba74b5 249 Gene3D G3DSA:3.40.50.150 2 244 7.7E-24 T 29-03-2018 AM474_RS09125 2891068abcb2a1361b39c59dc2ba74b5 249 SUPERFAMILY SSF53335 3 171 1.32E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS09125 2891068abcb2a1361b39c59dc2ba74b5 249 Pfam PF08241 Methyltransferase domain 41 128 1.5E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS10475 70d1c85033a7a3836af2d0b3eafdab20 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 14 216 3.4E-51 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10475 70d1c85033a7a3836af2d0b3eafdab20 219 Gene3D G3DSA:3.90.850.10 3 219 1.4E-60 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10475 70d1c85033a7a3836af2d0b3eafdab20 219 SUPERFAMILY SSF56529 11 217 3.66E-61 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10475 70d1c85033a7a3836af2d0b3eafdab20 219 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 11 216 3.9E-96 T 29-03-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 AM474_RS12550 5c7d537a2debf913d7fb42d74e33ebdc 290 SUPERFAMILY SSF51730 8 288 9.02E-96 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM474_RS12550 5c7d537a2debf913d7fb42d74e33ebdc 290 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 16 287 1.8E-100 T 29-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AM474_RS12550 5c7d537a2debf913d7fb42d74e33ebdc 290 Gene3D G3DSA:3.20.20.220 3 290 9.8E-97 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM474_RS12550 5c7d537a2debf913d7fb42d74e33ebdc 290 Pfam PF02219 Methylenetetrahydrofolate reductase 9 286 1.9E-88 T 29-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 36.599 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 29-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.40.50.300 1 48 1.5E-4 T 29-03-2018 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 Pfam PF00625 Guanylate kinase 4 182 3.6E-54 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 SUPERFAMILY SSF52540 3 186 1.63E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.30.63.10 49 80 6.6E-26 T 29-03-2018 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 SMART SM00072 2 184 9.5E-62 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.0E-74 T 29-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM474_RS16130 7baf81fa66da5d662e0023e48a6072b6 203 Gene3D G3DSA:3.40.50.300 81 184 7.3E-30 T 29-03-2018 AM474_RS31420 82ab2dd21f200e1248d36a36c2dd5558 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 489 2.0E-192 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS31420 82ab2dd21f200e1248d36a36c2dd5558 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 489 1.4E-214 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.0E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.0E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.0E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.0E-19 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 Gene3D G3DSA:3.30.565.10 309 460 1.6E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 SMART SM00387 351 460 1.4E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 459 1.4E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 Gene3D G3DSA:3.40.50.2300 20 155 1.5E-5 T 29-03-2018 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 SUPERFAMILY SSF47384 278 309 1.92E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 SUPERFAMILY SSF47384 203 243 1.92E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 SUPERFAMILY SSF55874 300 460 4.71E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 Gene3D G3DSA:1.10.287.130 186 306 5.7E-10 T 29-03-2018 AM474_RS00165 70b897bd54a9a83b17f6dd0f51f621ec 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 309 9.6E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS28205 13b8cab3e1033138fe58b79c8e5a6e99 240 SUPERFAMILY SSF56300 1 224 1.52E-29 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS28205 13b8cab3e1033138fe58b79c8e5a6e99 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 233 4.2E-115 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM474_RS28205 13b8cab3e1033138fe58b79c8e5a6e99 240 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 2.2E-9 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS28205 13b8cab3e1033138fe58b79c8e5a6e99 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 129.836 T 29-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 AM474_RS28205 13b8cab3e1033138fe58b79c8e5a6e99 240 Gene3D G3DSA:3.60.21.10 1 237 2.7E-22 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 Gene3D G3DSA:2.60.120.10 107 212 1.2E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 Pfam PF07883 Cupin domain 160 210 1.0E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 Gene3D G3DSA:1.10.260.40 40 106 2.6E-15 T 29-03-2018 AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 SUPERFAMILY SSF47413 43 104 1.42E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 SMART SM00530 48 103 6.1E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 Pfam PF01381 Helix-turn-helix 49 98 8.0E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS25870 5195ad3493a0a15d83d24b7e96b5b184 216 SUPERFAMILY SSF51182 120 211 5.6E-16 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.530.10 250 376 2.9E-36 T 29-03-2018 AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 Pfam PF13406 Transglycosylase SLT domain 75 369 2.0E-111 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.101.10 388 448 3.4E-13 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 75 373 7.0E-119 T 29-03-2018 IPR011970 Lytic murein transglycosylase AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 SUPERFAMILY SSF53955 65 375 4.69E-105 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 SUPERFAMILY SSF47090 377 446 3.4E-17 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 Pfam PF01471 Putative peptidoglycan binding domain 391 445 3.1E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS09835 ace02d04aa5629497ad86907221a2645 448 Gene3D G3DSA:1.10.8.350 140 244 9.8E-32 T 29-03-2018 AM474_RS06055 b3c6d734fdebe074e5f70d86ea4119e2 389 SUPERFAMILY SSF55073 227 388 2.04E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS06055 b3c6d734fdebe074e5f70d86ea4119e2 389 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 388 9.9E-49 T 29-03-2018 IPR000160 GGDEF domain AM474_RS06055 b3c6d734fdebe074e5f70d86ea4119e2 389 Gene3D G3DSA:3.30.70.270 215 389 2.6E-52 T 29-03-2018 AM474_RS06055 b3c6d734fdebe074e5f70d86ea4119e2 389 SMART SM00267 211 389 7.5E-57 T 29-03-2018 IPR000160 GGDEF domain AM474_RS06055 b3c6d734fdebe074e5f70d86ea4119e2 389 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 386 5.3E-49 T 29-03-2018 IPR000160 GGDEF domain AM474_RS31030 c1248e31360f4fc82b7faeec615ae5d7 485 Gene3D G3DSA:3.30.2010.10 216 316 1.4E-8 T 29-03-2018 AM474_RS31030 c1248e31360f4fc82b7faeec615ae5d7 485 Pfam PF01435 Peptidase family M48 285 450 5.6E-12 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS03880 2aadd292088d7419dd82f3dcf220d7fc 485 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 328 348 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS03880 2aadd292088d7419dd82f3dcf220d7fc 485 Pfam PF00860 Permease family 2 380 7.8E-90 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS03880 2aadd292088d7419dd82f3dcf220d7fc 485 TIGRFAM TIGR03173 pbuX: xanthine permease 3 413 1.3E-152 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM474_RS03880 2aadd292088d7419dd82f3dcf220d7fc 485 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 2 410 3.2E-100 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS14620 c567648722a7e1fc54eed61e63988c34 230 Pfam PF01797 Transposase IS200 like 11 123 7.0E-17 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS14620 c567648722a7e1fc54eed61e63988c34 230 Gene3D G3DSA:3.30.70.1290 2 133 1.6E-30 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS14620 c567648722a7e1fc54eed61e63988c34 230 SUPERFAMILY SSF143422 3 128 2.88E-31 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS14620 c567648722a7e1fc54eed61e63988c34 230 SMART SM01321 9 125 6.9E-44 T 29-03-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 AM474_RS11555 d753bbeeb23d6a9108eaa956b78c5522 149 Pfam PF16085 Bacteriophage holin Hol, superfamily III 33 144 6.0E-62 T 29-03-2018 IPR032128 Pyocin R2, holin AM474_RS10045 bd27c34d276988fc4748b98e423aba7c 333 PIRSF PIRSF029644 1 333 5.5E-107 T 29-03-2018 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 AM474_RS10045 bd27c34d276988fc4748b98e423aba7c 333 Pfam PF04773 FecR protein 90 184 1.7E-15 T 29-03-2018 IPR006860 FecR protein AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 SMART SM00345 10 69 5.8E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 2.7E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 SUPERFAMILY SSF46785 3 73 5.74E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 SMART SM00895 94 225 3.6E-26 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 Pfam PF07729 FCD domain 94 224 5.6E-26 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 Gene3D G3DSA:1.10.10.10 1 77 9.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 SUPERFAMILY SSF48008 91 232 2.56E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.9E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.9E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16025 0c2d41a6119bf164749e8b5e59f5bcd3 251 Gene3D G3DSA:1.20.120.530 86 245 1.9E-31 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 SUPERFAMILY SSF52540 4 249 5.1E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 Pfam PF00005 ABC transporter 19 179 2.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 PIRSF PIRSF039085 1 255 1.6E-114 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 Gene3D G3DSA:3.40.50.300 2 254 8.6E-71 T 29-03-2018 AM474_RS03815 b161a47bb32b51e83a9da04d693a6746 255 SMART SM00382 28 227 1.9E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS19245 e462faf45778b436a14fc69a89f2610a 155 Pfam PF01597 Glycine cleavage H-protein 16 132 2.3E-23 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM474_RS19245 e462faf45778b436a14fc69a89f2610a 155 SUPERFAMILY SSF51230 10 120 9.94E-23 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS19245 e462faf45778b436a14fc69a89f2610a 155 Gene3D G3DSA:2.40.50.100 13 138 1.2E-21 T 29-03-2018 AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 Gene3D G3DSA:1.20.1050.10 95 216 7.4E-26 T 29-03-2018 AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 SUPERFAMILY SSF52833 1 102 1.7E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 Gene3D G3DSA:3.40.30.10 1 94 6.1E-28 T 29-03-2018 AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 79 1.4E-25 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 Pfam PF14497 Glutathione S-transferase, C-terminal domain 129 204 6.1E-13 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS03285 9c524ad6d011c3737c8b14f94650d668 220 SUPERFAMILY SSF47616 78 209 5.87E-27 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS23390 adf37ad590ba42a26959446a70f92993 312 Gene3D G3DSA:2.60.120.330 66 240 1.6E-42 T 29-03-2018 IPR027443 Isopenicillin N synthase-like AM474_RS23390 adf37ad590ba42a26959446a70f92993 312 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 75 228 5.2E-47 T 29-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 AM474_RS23390 adf37ad590ba42a26959446a70f92993 312 SUPERFAMILY SSF51197 105 227 3.02E-17 T 29-03-2018 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 PIRSF PIRSF002599 1 84 2.7E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 Gene3D G3DSA:2.40.50.140 1 76 1.9E-24 T 29-03-2018 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 67 6.5E-38 T 29-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 SMART SM00357 3 67 3.9E-23 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 SUPERFAMILY SSF50249 1 65 2.4E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS00950 369e4e9b07834af497b8a61b3a4a6c1a 90 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.6E-27 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS31835 668246e173fcdf56fbeb855b40c642cb 127 Gene3D G3DSA:2.40.50.100 2 126 5.2E-38 T 29-03-2018 AM474_RS31835 668246e173fcdf56fbeb855b40c642cb 127 Pfam PF01597 Glycine cleavage H-protein 4 122 3.7E-37 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM474_RS31835 668246e173fcdf56fbeb855b40c642cb 127 SUPERFAMILY SSF51230 2 122 8.11E-36 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS31835 668246e173fcdf56fbeb855b40c642cb 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 38.365 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM474_RS31835 668246e173fcdf56fbeb855b40c642cb 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 123 8.5E-42 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Gene3D G3DSA:1.10.3170.10 160 362 2.0E-47 T 29-03-2018 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52540 123 207 7.57E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52540 555 802 7.57E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52540 839 863 7.57E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52540 5 82 7.57E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52540 343 519 7.57E-110 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Gene3D G3DSA:3.40.50.300 363 423 0.0014 T 29-03-2018 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 461 2.3E-57 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Gene3D G3DSA:3.90.320.10 931 1245 4.8E-75 T 29-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Gene3D G3DSA:3.40.50.300 633 862 1.6E-24 T 29-03-2018 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1238 21.729 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1011 1214 1.3E-6 T 29-03-2018 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Pfam PF13361 UvrD-like helicase C-terminal domain 469 671 2.6E-6 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Pfam PF13361 UvrD-like helicase C-terminal domain 724 859 2.8E-12 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 Gene3D G3DSA:3.40.50.300 471 632 1.6E-17 T 29-03-2018 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1237 0.0 T 29-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 AM474_RS21995 f996be5399137593ed49b051a0f037c8 1245 SUPERFAMILY SSF52980 942 1239 1.02E-71 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 Pfam PF13411 MerR HTH family regulatory protein 6 67 3.2E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 Gene3D G3DSA:1.10.1660.10 58 133 8.3E-11 T 29-03-2018 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 SMART SM00422 4 72 5.1E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 6.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 6.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.1E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 SUPERFAMILY SSF46955 5 123 9.89E-25 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS17290 844399290c4e638a226b8588e7e0aa3e 141 Gene3D G3DSA:1.10.1660.10 1 57 6.7E-17 T 29-03-2018 AM474_RS14370 af55f09929ed2e94d1582a23ac294bfb 162 Gene3D G3DSA:2.30.110.20 1 162 1.9E-51 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS14370 af55f09929ed2e94d1582a23ac294bfb 162 SUPERFAMILY SSF141452 2 160 2.88E-58 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS14370 af55f09929ed2e94d1582a23ac294bfb 162 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 13 144 9.0E-17 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS14370 af55f09929ed2e94d1582a23ac294bfb 162 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 1.2E-43 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 SUPERFAMILY SSF103473 8 420 1.83E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 Gene3D G3DSA:1.20.1250.20 224 427 6.3E-20 T 29-03-2018 AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 Gene3D G3DSA:1.20.1250.20 7 221 3.0E-23 T 29-03-2018 AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS15365 53a1f71169181c210ce9139daa41b5d9 429 Pfam PF07690 Major Facilitator Superfamily 16 370 7.5E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 251 1.3E-94 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 Gene3D G3DSA:3.40.190.10 138 259 8.7E-20 T 29-03-2018 AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 252 2.4E-66 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 SUPERFAMILY SSF53850 1 255 3.03E-70 T 29-03-2018 AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 SMART SM00062 25 254 2.1E-81 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS23120 83a71b07e1fbdcbed0f7e382b1b06eee 259 Gene3D G3DSA:3.40.190.10 16 137 3.5E-37 T 29-03-2018 AM474_RS02585 7fbae60727fae23d20a9f2f52dd8a0d2 371 Pfam PF00589 Phage integrase family 175 332 4.5E-18 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS02585 7fbae60727fae23d20a9f2f52dd8a0d2 371 Gene3D G3DSA:1.10.443.10 171 339 6.4E-28 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS02585 7fbae60727fae23d20a9f2f52dd8a0d2 371 SUPERFAMILY SSF56349 58 333 9.42E-38 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS02585 7fbae60727fae23d20a9f2f52dd8a0d2 371 Gene3D G3DSA:1.10.150.130 48 170 1.6E-4 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS10755 20f9db3b155c6e9d1d1ffc5027eff9f7 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 112 1.1E-16 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM474_RS10755 20f9db3b155c6e9d1d1ffc5027eff9f7 133 SUPERFAMILY SSF51316 1 132 1.78E-43 T 29-03-2018 IPR011057 Mss4-like AM474_RS10755 20f9db3b155c6e9d1d1ffc5027eff9f7 133 Gene3D G3DSA:3.90.1590.10 1 133 4.2E-38 T 29-03-2018 AM474_RS31145 551f1d74e6e018f33a712b932c1af7b0 288 SUPERFAMILY SSF161098 86 269 1.83E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31145 551f1d74e6e018f33a712b932c1af7b0 288 Gene3D G3DSA:1.10.3720.10 34 284 2.3E-19 T 29-03-2018 AM474_RS31145 551f1d74e6e018f33a712b932c1af7b0 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 283 1.5E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS11980 d486da688892f67fbae13c101a785bc8 128 Pfam PF01124 MAPEG family 3 127 7.0E-22 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM474_RS11980 d486da688892f67fbae13c101a785bc8 128 SUPERFAMILY SSF161084 2 125 9.03E-23 T 29-03-2018 AM474_RS11980 d486da688892f67fbae13c101a785bc8 128 Gene3D G3DSA:1.20.120.550 1 128 3.1E-19 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 SMART SM00829 10 316 5.1E-38 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 100 3.9E-13 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 Pfam PF13602 Zinc-binding dehydrogenase 186 315 9.0E-27 T 29-03-2018 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 Gene3D G3DSA:3.90.180.10 1 138 2.1E-44 T 29-03-2018 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 SUPERFAMILY SSF51735 116 285 4.13E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 Gene3D G3DSA:3.40.50.720 139 284 7.6E-32 T 29-03-2018 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM474_RS08935 e32253c7e9384288f6dac76fa334e617 330 SUPERFAMILY SSF50129 1 148 4.41E-40 T 29-03-2018 IPR011032 GroES-like AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 SUPERFAMILY SSF53901 268 389 1.28E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 3.7E-139 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 Pfam PF00108 Thiolase, N-terminal domain 4 259 2.8E-72 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 Gene3D G3DSA:3.40.47.10 1 264 2.7E-58 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 Gene3D G3DSA:3.40.47.10 265 387 4.2E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 SUPERFAMILY SSF53901 1 264 1.85E-73 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 Pfam PF02803 Thiolase, C-terminal domain 267 389 1.2E-47 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS00305 e7dde6c7138ba2d3f56ae341fad1de22 391 PIRSF PIRSF000429 1 391 1.1E-130 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.2E-60 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.12 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.7E-47 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 29-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 Gene3D G3DSA:3.90.1170.10 1 137 9.5E-48 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-39 T 29-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11135 eea4470f9113d11957d63cc6a572200f 137 SUPERFAMILY SSF54686 1 134 4.19E-53 T 29-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 SUPERFAMILY SSF48452 30 135 1.59E-13 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 Gene3D G3DSA:1.25.40.10 20 161 2.2E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 PIRSF PIRSF003165 1 162 1.9E-59 T 29-03-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 154 1.5E-43 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 48 67 2.8E-48 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 23 46 2.8E-48 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 104 126 2.8E-48 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM474_RS27755 bc45455fe8a054194fe19b91a651f7bf 168 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 72 94 2.8E-48 T 29-03-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 Pfam PF03109 ABC1 family 114 233 1.7E-36 T 29-03-2018 IPR004147 UbiB domain AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 Gene3D G3DSA:3.30.200.20 106 246 1.8E-24 T 29-03-2018 AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 533 54.219 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 447 1.6E-177 T 29-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 SUPERFAMILY SSF56112 97 160 1.86E-47 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS17545 d671422f9ab5d8423cd8f0ff25039ee2 533 SUPERFAMILY SSF56112 195 438 1.86E-47 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SUPERFAMILY SSF58104 228 412 1.96E-56 T 29-03-2018 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Gene3D G3DSA:1.10.287.950 236 415 7.7E-47 T 29-03-2018 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Pfam PF13426 PAS domain 14 109 3.5E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Pfam PF08447 PAS fold 142 227 5.2E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 413 3.0E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SMART SM00091 3 65 2.3 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SMART SM00091 117 186 9.5 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SUPERFAMILY SSF55785 129 231 5.76E-25 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SMART SM00086 70 112 0.022 T 29-03-2018 IPR001610 PAC motif AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SMART SM00086 192 234 2.3E-6 T 29-03-2018 IPR001610 PAC motif AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SMART SM00283 223 417 1.7E-24 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 SUPERFAMILY SSF55785 7 109 1.14E-26 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Gene3D G3DSA:3.40.50.10600 112 235 2.7E-31 T 29-03-2018 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 Gene3D G3DSA:3.40.50.10600 1 111 1.3E-31 T 29-03-2018 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 303 330 6.0E-19 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 361 6.0E-19 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 118 1.6E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS26175 4b7134de58e7a7ee35ef0c7501950081 417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 237 2.9E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SMART SM00073 8 105 3.4E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SUPERFAMILY SSF50341 486 618 5.89E-25 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Gene3D G3DSA:1.20.120.160 4 176 3.6E-29 T 29-03-2018 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Pfam PF01584 CheW-like domain 493 621 1.4E-18 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Gene3D G3DSA:3.40.50.2300 641 768 2.1E-31 T 29-03-2018 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 3.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Gene3D G3DSA:3.30.565.10 181 486 2.3E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SUPERFAMILY SSF55874 303 485 3.41E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 486 7.0E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SMART SM00448 646 760 4.4E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SUPERFAMILY SSF47226 8 118 2.75E-24 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SMART SM00387 344 487 9.9E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Pfam PF01627 Hpt domain 11 101 1.3E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SUPERFAMILY SSF52172 644 764 4.7E-31 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Pfam PF00072 Response regulator receiver domain 648 759 1.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Gene3D G3DSA:2.30.30.40 487 547 0.2 T 29-03-2018 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 Gene3D G3DSA:2.30.30.40 553 618 2.8E-15 T 29-03-2018 AM474_RS07880 16f87a2bb8f767bbdcc4a5054685d5ec 769 SMART SM00260 479 618 3.0E-11 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 SUPERFAMILY SSF82689 983 1083 3.79E-21 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 SUPERFAMILY SSF50182 916 981 4.58E-17 T 29-03-2018 IPR010920 LSM domain AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 945 979 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 Gene3D G3DSA:2.30.30.60 932 982 9.3E-13 T 29-03-2018 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 493 812 1.8E-105 T 29-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 Gene3D G3DSA:3.30.70.100 983 1077 6.8E-17 T 29-03-2018 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 SUPERFAMILY SSF82861 830 914 2.22E-7 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 Pfam PF12795 Mechanosensitive ion channel porin domain 38 273 6.0E-56 T 29-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain AM474_RS18045 9e07c4976b2a83603c008138bc918f64 1118 Pfam PF00924 Mechanosensitive ion channel 873 1071 1.4E-51 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 9.3E-102 T 29-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 Pfam PF00106 short chain dehydrogenase 6 194 1.1E-54 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.3E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.3E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.3E-14 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 SUPERFAMILY SSF51735 1 255 4.45E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 Gene3D G3DSA:3.40.50.720 41 256 1.4E-59 T 29-03-2018 AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 Gene3D G3DSA:3.40.50.720 1 40 5.2E-8 T 29-03-2018 AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29330 25cdd8b45f1333a98c6e1a2bc770eb5e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.2E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS20385 d4d5389d822c8bc0c34ac280bfb10a3c 425 Gene3D G3DSA:1.20.1600.10 63 346 6.2E-16 T 29-03-2018 AM474_RS20385 d4d5389d822c8bc0c34ac280bfb10a3c 425 SUPERFAMILY SSF111369 56 124 1.96E-7 T 29-03-2018 AM474_RS20385 d4d5389d822c8bc0c34ac280bfb10a3c 425 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 314 2.0E-11 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00158 Sigma-54 interaction domain 145 310 4.5E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52172 5 187 1.85E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF02954 Bacterial regulatory protein, Fis family 394 433 1.1E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.300 144 315 5.8E-27 T 29-03-2018 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Pfam PF00072 Response regulator receiver domain 5 113 7.0E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.10.60 397 441 1.4E-10 T 29-03-2018 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:3.40.50.2300 3 143 1.0E-32 T 29-03-2018 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00382 164 307 4.2E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF46689 355 436 3.76E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 Gene3D G3DSA:1.10.8.60 316 396 1.7E-21 T 29-03-2018 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 SMART SM00448 3 114 1.0E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 SUPERFAMILY SSF52540 144 373 4.49E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15190 2ee032b71f1432ca04bf81882ebc8ead 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 475 36.751 T 29-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Gene3D G3DSA:1.25.40.10 215 356 2.8E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Gene3D G3DSA:3.30.2010.10 49 145 5.2E-17 T 29-03-2018 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Pfam PF14559 Tetratricopeptide repeat 281 336 3.9E-6 T 29-03-2018 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 SUPERFAMILY SSF48452 284 447 2.67E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Gene3D G3DSA:1.25.40.10 357 475 1.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS23865 a7164cc8db2817771ad3444e1a09d72c 477 Pfam PF01435 Peptidase family M48 67 250 5.0E-32 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 Gene3D G3DSA:1.10.510.10 125 317 1.3E-43 T 29-03-2018 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 SUPERFAMILY SSF56112 39 307 1.97E-60 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 SMART SM00220 51 323 8.0E-44 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 179 191 - T 29-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 PIRSF PIRSF000654 80 297 1.1E-17 T 29-03-2018 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 Pfam PF00069 Protein kinase domain 51 280 1.0E-38 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 57 86 - T 29-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AM474_RS27570 8dd3b4fd0383f4e5385d9420ba317f7f 329 Gene3D G3DSA:3.30.200.20 43 124 2.2E-16 T 29-03-2018 AM474_RS25315 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:1.10.1530.10 2 74 1.6E-22 T 29-03-2018 AM474_RS25315 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:1.10.1530.10 277 323 2.2E-5 T 29-03-2018 AM474_RS25315 2476316002f63fb0f816fed0beb7d424 334 SUPERFAMILY SSF89733 2 333 3.4E-101 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM474_RS25315 2476316002f63fb0f816fed0beb7d424 334 Pfam PF02615 Malate/L-lactate dehydrogenase 5 329 3.7E-101 T 29-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 AM474_RS25315 2476316002f63fb0f816fed0beb7d424 334 Gene3D G3DSA:3.30.1370.60 75 274 8.6E-75 T 29-03-2018 AM474_RS02135 6cd0251b320a229c63b4763b521acc10 318 Gene3D G3DSA:1.20.1080.10 73 318 4.6E-47 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM474_RS02135 6cd0251b320a229c63b4763b521acc10 318 Pfam PF01226 Formate/nitrite transporter 78 310 2.0E-43 T 29-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69075 315 416 1.7E-27 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 31.249 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF69742 1 156 6.02E-49 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 PIRSF PIRSF000445 1 422 7.8E-158 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.2E-50 T 29-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 29-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Gene3D G3DSA:1.10.1200.70 330 416 7.7E-25 T 29-03-2018 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 SUPERFAMILY SSF51735 160 313 3.38E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Gene3D G3DSA:3.40.50.720 159 312 2.2E-23 T 29-03-2018 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 415 1.7E-23 T 29-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.1E-141 T 29-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 AM474_RS19980 fbe12e0416aebd409fddcfc1704da6ce 422 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.2E-50 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 SUPERFAMILY SSF50249 3 123 3.48E-51 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.4E-70 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-60 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.6E-42 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 PIRSF PIRSF002133 1 123 9.8E-53 T 29-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 Gene3D G3DSA:2.40.50.140 1 123 1.5E-63 T 29-03-2018 AM474_RS11195 d35b6f1d8024dfdd575ece7c4321a1d8 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.002 T 29-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS29635 ab45e3cc43e23eab638abec453ec6b95 407 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 23 286 2.4E-75 T 29-03-2018 IPR018712 Domain of unknown function DUF2235 AM474_RS29635 ab45e3cc43e23eab638abec453ec6b95 407 Gene3D G3DSA:3.40.50.1820 5 391 3.7E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29635 ab45e3cc43e23eab638abec453ec6b95 407 SUPERFAMILY SSF53474 14 139 7.3E-8 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS23640 d3ec2769200b86fec58834a97193f1f8 347 Gene3D G3DSA:2.60.120.10 31 347 8.5E-37 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS23640 d3ec2769200b86fec58834a97193f1f8 347 SUPERFAMILY SSF51182 7 342 5.73E-106 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS23640 d3ec2769200b86fec58834a97193f1f8 347 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 7 344 1.3E-161 T 29-03-2018 IPR011960 Gentisate 1,2-dioxygenase AM474_RS23640 d3ec2769200b86fec58834a97193f1f8 347 Pfam PF07883 Cupin domain 89 150 2.4E-22 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 SUPERFAMILY SSF53187 5 173 2.26E-60 T 29-03-2018 AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 SUPERFAMILY SSF53187 304 379 2.26E-60 T 29-03-2018 AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 Pfam PF07687 Peptidase dimerisation domain 171 280 3.2E-25 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 Gene3D G3DSA:3.40.630.10 2 281 1.5E-60 T 29-03-2018 AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 SUPERFAMILY SSF55031 174 279 1.09E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 Pfam PF01546 Peptidase family M20/M25/M40 66 378 6.1E-37 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 137 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM474_RS15825 2638578ff8c73871a0c92ab04b63716f 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 6 377 8.2E-124 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Gene3D G3DSA:3.50.50.60 317 432 1.5E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Gene3D G3DSA:3.50.50.60 3 308 5.1E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 PIRSF PIRSF000171 1 580 1.6E-48 T 29-03-2018 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 6.2E-41 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 29-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 SUPERFAMILY SSF51905 6 262 4.33E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 SUPERFAMILY SSF51905 361 427 4.33E-74 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 SUPERFAMILY SSF46977 454 590 2.35E-49 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Pfam PF00890 FAD binding domain 10 407 1.6E-117 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 SUPERFAMILY SSF56425 240 358 8.52E-40 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 4.7E-258 T 29-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 0.0 T 29-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Gene3D G3DSA:4.10.80.40 544 590 3.1E-14 T 29-03-2018 AM474_RS27090 4b5b36c069df26584e0fe3adc0ecb7bc 590 Gene3D G3DSA:1.20.58.100 433 543 1.2E-34 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.4E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SUPERFAMILY SSF46785 5 75 2.57E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SUPERFAMILY SSF48008 78 215 3.66E-9 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SMART SM00345 13 71 5.4E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Pfam PF07729 FCD domain 88 202 3.8E-10 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 SMART SM00895 81 207 0.0076 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Gene3D G3DSA:1.20.120.530 74 219 3.4E-17 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS26755 4ef715ef2220a454c1d2aa5fe4fc5cb8 219 Gene3D G3DSA:1.10.10.10 1 73 5.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29395 352ebdd38253781d834369952ed91d04 134 Gene3D G3DSA:1.10.1660.10 2 58 1.0E-18 T 29-03-2018 AM474_RS29395 352ebdd38253781d834369952ed91d04 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS29395 352ebdd38253781d834369952ed91d04 134 SMART SM00422 5 72 2.4E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS29395 352ebdd38253781d834369952ed91d04 134 Gene3D G3DSA:1.10.1660.10 59 134 5.6E-14 T 29-03-2018 AM474_RS29395 352ebdd38253781d834369952ed91d04 134 Pfam PF13411 MerR HTH family regulatory protein 5 70 4.2E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS29395 352ebdd38253781d834369952ed91d04 134 SUPERFAMILY SSF46955 5 121 2.49E-24 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 PIRSF PIRSF038885 1 403 6.7E-161 T 29-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81648 281 396 5.01E-33 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 SUPERFAMILY SSF81342 13 279 1.27E-96 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 379 1.3E-43 T 29-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 Gene3D G3DSA:1.20.810.10 6 400 8.7E-164 T 29-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 AM474_RS21235 58e0e807954272da9903afe6d817e2ac 403 Pfam PF00033 Cytochrome b/b6/petB 24 211 8.7E-68 T 29-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:3.40.50.300 1 238 4.1E-72 T 29-03-2018 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 Pfam PF08402 TOBE domain 281 355 4.6E-11 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 SMART SM00382 28 211 1.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:2.40.50.100 239 291 3.4E-8 T 29-03-2018 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 Gene3D G3DSA:2.40.50.140 292 348 1.9E-13 T 29-03-2018 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 SUPERFAMILY SSF52540 4 240 4.62E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 Pfam PF00005 ABC transporter 20 161 3.9E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS31295 f209834afdb5be0a4e703896101cef94 370 SUPERFAMILY SSF50331 236 362 1.34E-27 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF00403 Heavy-metal-associated domain 4 63 4.0E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.30.70.100 1 68 5.2E-18 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 184 276 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 88 136 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 303 444 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 132 151 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 521 540 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 259 276 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 279 294 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 97 115 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 13 23 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 224 241 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 456 476 1.7E-92 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.30.390.30 435 548 1.1E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF55008 2 64 7.85E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 PIRSF PIRSF000350 1 548 4.5E-264 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 87 405 2.5E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 424 532 2.0E-29 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 120 130 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 TIGRFAM TIGR02053 MerA: mercury(II) reductase 87 548 3.9E-187 T 29-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.40.50.720 249 434 4.6E-31 T 29-03-2018 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.50.50.60 85 248 1.2E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26245 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF55424 423 546 3.09E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF00403 Heavy-metal-associated domain 4 63 4.0E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.30.70.100 1 68 5.2E-18 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 184 276 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 88 136 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF51905 303 444 1.08E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 132 151 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 521 540 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 259 276 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 279 294 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 97 115 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 13 23 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 224 241 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PRINTS PR00945 Mercuric reductase class II signature 456 476 1.7E-92 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.30.390.30 435 548 1.1E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF55008 2 64 7.85E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 PIRSF PIRSF000350 1 548 4.5E-264 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 87 405 2.5E-63 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 424 532 2.0E-29 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 120 130 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 TIGRFAM TIGR02053 MerA: mercury(II) reductase 87 548 3.9E-187 T 29-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.40.50.720 249 434 4.6E-31 T 29-03-2018 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 Gene3D G3DSA:3.50.50.60 85 248 1.2E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01780 ec75476d41e60049e6a180e6c89afc88 548 SUPERFAMILY SSF55424 423 546 3.09E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 713 730 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 Gene3D G3DSA:2.170.130.10 26 174 1.0E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 730 2.0E-71 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 Pfam PF00593 TonB dependent receptor 264 728 5.7E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 Gene3D G3DSA:2.40.170.20 183 730 8.5E-75 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 SUPERFAMILY SSF56935 30 730 6.8E-122 T 29-03-2018 AM474_RS12530 0d77042f7ecf04c186ec1c9ae93f4c39 730 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 167 5.0E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS18600 e1ef486465ae82017fe70a44f2dab472 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 27 273 1.0E-67 T 29-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM474_RS18600 e1ef486465ae82017fe70a44f2dab472 275 Gene3D G3DSA:3.40.50.620 3 275 3.1E-60 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18600 e1ef486465ae82017fe70a44f2dab472 275 SUPERFAMILY SSF52402 20 272 3.45E-77 T 29-03-2018 AM474_RS18600 e1ef486465ae82017fe70a44f2dab472 275 Pfam PF02540 NAD synthase 28 272 8.4E-65 T 29-03-2018 IPR022310 NAD/GMP synthase AM474_RS18600 e1ef486465ae82017fe70a44f2dab472 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 22 275 32.708 T 29-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 Gene3D G3DSA:1.10.3210.10 40 320 7.1E-48 T 29-03-2018 AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 Pfam PF01966 HD domain 158 279 3.0E-15 T 29-03-2018 IPR006674 HD domain AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 SMART SM00471 153 289 1.0E-11 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 Pfam PF11871 Domain of unknown function (DUF3391) 2 125 7.7E-34 T 29-03-2018 IPR021812 Protein of unknown function DUF3391 AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 TIGRFAM TIGR00277 HDIG: HDIG domain 155 246 2.1E-8 T 29-03-2018 IPR006675 HDIG domain AM474_RS10405 40f0212e45a42d97229ee0dbc124de77 414 SUPERFAMILY SSF109604 150 317 2.07E-33 T 29-03-2018 AM474_RS24600 528b724b628953cd74ba5dc27bc864f3 291 Gene3D G3DSA:3.40.50.880 3 290 1.7E-55 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS24600 528b724b628953cd74ba5dc27bc864f3 291 Hamap MF_01046 Protein deglycase HchA [hchA]. 3 291 67.869 T 29-03-2018 IPR017283 Protein deglycase HchA AM474_RS24600 528b724b628953cd74ba5dc27bc864f3 291 SUPERFAMILY SSF52317 50 285 1.5E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS24600 528b724b628953cd74ba5dc27bc864f3 291 Pfam PF01965 DJ-1/PfpI family 77 196 3.4E-7 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS24600 528b724b628953cd74ba5dc27bc864f3 291 PIRSF PIRSF037798 1 291 2.7E-166 T 29-03-2018 IPR017283 Protein deglycase HchA AM474_RS05450 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 179 204 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS05450 786c328242cb4e67af5967e4116c488f 551 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 452 472 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS05450 786c328242cb4e67af5967e4116c488f 551 Pfam PF00474 Sodium:solute symporter family 64 470 8.0E-129 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS05450 786c328242cb4e67af5967e4116c488f 551 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 64 469 1.3E-61 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 168 710 2.9E-210 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 40 146 5.5E-22 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Gene3D G3DSA:3.30.365.10 621 783 4.5E-63 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Gene3D G3DSA:3.30.365.10 460 620 8.8E-53 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 782 0.0 T 29-03-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Gene3D G3DSA:3.30.365.10 169 277 6.3E-33 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 SUPERFAMILY SSF56003 148 780 6.41E-209 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 SUPERFAMILY SSF54665 24 148 5.63E-38 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Gene3D G3DSA:3.90.1170.50 24 147 3.8E-27 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 SMART SM01008 40 147 4.8E-38 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS26740 5d9867d3608a4698ef07b756b51e1a0e 799 Gene3D G3DSA:3.30.365.10 278 440 7.1E-60 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 SUPERFAMILY SSF52733 4 347 8.63E-120 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 Gene3D G3DSA:3.40.50.10210 71 329 2.2E-103 T 29-03-2018 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 Pfam PF02277 Phosphoribosyltransferase 12 346 2.2E-130 T 29-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 348 37.069 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 346 4.9E-134 T 29-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25460 9a662334f686f114c58654ee833bf30a 351 Gene3D G3DSA:1.10.1610.10 6 70 1.9E-29 T 29-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS20675 5b9538301191435381ca0e5f63e3e9cd 363 SUPERFAMILY SSF52540 55 181 6.35E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20675 5b9538301191435381ca0e5f63e3e9cd 363 Gene3D G3DSA:3.40.50.300 36 340 1.0E-10 T 29-03-2018 AM474_RS20675 5b9538301191435381ca0e5f63e3e9cd 363 Pfam PF03969 AFG1-like ATPase 18 360 1.7E-135 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM474_RS01465 6fcd48a554058decdbb09a0d93f15938 311 PIRSF PIRSF018266 2 310 1.1E-86 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS01465 6fcd48a554058decdbb09a0d93f15938 311 Pfam PF16220 Domain of unknown function (DUF4880) 9 51 3.6E-13 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS01465 6fcd48a554058decdbb09a0d93f15938 311 Pfam PF04773 FecR protein 108 196 7.1E-17 T 29-03-2018 IPR006860 FecR protein AM474_RS04415 6757c1e0681b52b8358fc0740685987a 460 ProSitePatterns PS01219 Ammonium transporters signature. 221 246 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM474_RS04415 6757c1e0681b52b8358fc0740685987a 460 SUPERFAMILY SSF111352 71 438 3.14E-91 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM474_RS04415 6757c1e0681b52b8358fc0740685987a 460 Gene3D G3DSA:1.10.3430.10 66 438 4.9E-86 T 29-03-2018 AM474_RS04415 6757c1e0681b52b8358fc0740685987a 460 Pfam PF00909 Ammonium Transporter Family 77 453 1.5E-85 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 SUPERFAMILY SSF46689 275 320 4.48E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 SMART SM00342 239 322 6.5E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 Gene3D G3DSA:1.10.10.60 280 329 1.2E-10 T 29-03-2018 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 Pfam PF06719 AraC-type transcriptional regulator N-terminus 60 210 5.4E-51 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 SUPERFAMILY SSF46689 223 273 9.86E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 Gene3D G3DSA:1.10.10.60 220 279 1.5E-17 T 29-03-2018 AM474_RS29550 54784cbf2d95dfee2113f68a6d21d688 329 Pfam PF12833 Helix-turn-helix domain 245 319 1.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 Gene3D G3DSA:1.10.1040.10 190 287 6.8E-18 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 256 4.2E-15 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 SUPERFAMILY SSF51735 6 185 9.45E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 184 7.4E-40 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 PIRSF PIRSF000105 4 301 9.9E-55 T 29-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 Gene3D G3DSA:3.40.50.720 4 189 3.5E-36 T 29-03-2018 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 8 318 54.028 T 29-03-2018 IPR026578 L-carnitine dehydrogenase KEGG: 00040+1.1.1.10|MetaCyc: PWY-3602|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7472 AM474_RS15845 45f820ae6333e4867f030b045fc3ed0f 321 SUPERFAMILY SSF48179 188 275 1.28E-14 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS14240 5bff5e48a661b647e616302b656e2e4c 69 Pfam PF11137 Protein of unknown function (DUF2909) 2 60 1.4E-20 T 29-03-2018 IPR021313 Protein of unknown function DUF2909 AM474_RS06985 670a8f342c47841e89fce46e222d406d 383 SUPERFAMILY SSF103473 11 381 3.4E-39 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS06985 670a8f342c47841e89fce46e222d406d 383 Pfam PF07690 Major Facilitator Superfamily 14 318 4.7E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS06985 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 198 379 4.8E-14 T 29-03-2018 AM474_RS06985 670a8f342c47841e89fce46e222d406d 383 Gene3D G3DSA:1.20.1250.20 5 193 2.1E-16 T 29-03-2018 AM474_RS10025 b134aa69193204bf8e5603a8619f9980 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.083 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM474_RS10025 b134aa69193204bf8e5603a8619f9980 175 SUPERFAMILY SSF50324 3 174 2.09E-68 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM474_RS10025 b134aa69193204bf8e5603a8619f9980 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM474_RS10025 b134aa69193204bf8e5603a8619f9980 175 Gene3D G3DSA:3.90.80.10 1 175 1.1E-53 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM474_RS10025 b134aa69193204bf8e5603a8619f9980 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.5E-54 T 29-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM474_RS17000 18126d7d6463bbb99172d1d1e89601f5 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 3.9E-22 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM474_RS00355 0960eb0d07901642296190b0fe97a857 333 Gene3D G3DSA:3.90.850.10 56 332 6.0E-66 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00355 0960eb0d07901642296190b0fe97a857 333 SUPERFAMILY SSF56529 132 327 1.44E-61 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00355 0960eb0d07901642296190b0fe97a857 333 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 140 325 1.4E-57 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF52540 73 152 8.76E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF52540 188 373 8.76E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:1.20.120.430 282 455 1.7E-33 T 29-03-2018 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF01926 50S ribosome-binding GTPase 219 307 4.6E-24 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 455 32.781 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 5.2E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 5.2E-5 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 455 5.5E-103 T 29-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 367 5.1E-20 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 2.5E-36 T 29-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF116878 121 220 8.63E-50 T 29-03-2018 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 SUPERFAMILY SSF116878 380 455 8.63E-50 T 29-03-2018 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Pfam PF12631 MnmE helical domain 123 452 4.6E-58 T 29-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:3.30.1360.120 1 121 1.7E-43 T 29-03-2018 AM474_RS14895 be0dc511ea5dadb6f4f1b260c9a868f5 455 Gene3D G3DSA:1.20.120.430 122 281 6.1E-28 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 Gene3D G3DSA:1.10.287.470 140 197 1.4E-8 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 Gene3D G3DSA:2.40.50.100 64 135 3.4E-14 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 Pfam PF13533 Biotin-lipoyl like 65 109 3.6E-11 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 SUPERFAMILY SSF111369 63 158 2.29E-10 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 SUPERFAMILY SSF111369 189 296 1.31E-10 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 1.7E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 1.7E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 288 312 1.7E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 360 375 1.7E-10 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 Gene3D G3DSA:2.40.50.100 236 373 2.5E-7 T 29-03-2018 AM474_RS25185 e28df56746f82e31074009189d839e1d 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 188 320 3.2E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 SUPERFAMILY SSF51735 162 356 1.28E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 Gene3D G3DSA:3.40.50.720 184 338 7.6E-24 T 29-03-2018 AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 1.7E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 Pfam PF00107 Zinc-binding dehydrogenase 197 265 8.2E-9 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 395 8.2E-229 T 29-03-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 SUPERFAMILY SSF50129 4 187 2.6E-64 T 29-03-2018 IPR011032 GroES-like AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 Gene3D G3DSA:3.90.180.10 5 183 8.8E-39 T 29-03-2018 AM474_RS15670 63438a00d4ee341d1f60036ebca74e86 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS02635 af94e70ff67304009baba9017442898b 193 SUPERFAMILY SSF109604 29 103 1.41E-8 T 29-03-2018 AM474_RS02635 af94e70ff67304009baba9017442898b 193 Pfam PF01966 HD domain 32 91 2.8E-8 T 29-03-2018 IPR006674 HD domain AM474_RS02635 af94e70ff67304009baba9017442898b 193 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 7 180 8.2E-76 T 29-03-2018 IPR017670 Phosphonate degradation operon associated HDIG domain protein AM474_RS02635 af94e70ff67304009baba9017442898b 193 Gene3D G3DSA:1.10.3210.10 14 140 4.0E-9 T 29-03-2018 AM474_RS10350 91016643371dcd5f8993309534206577 370 Pfam PF00355 Rieske [2Fe-2S] domain 30 111 3.1E-15 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS10350 91016643371dcd5f8993309534206577 370 Gene3D G3DSA:2.102.10.10 28 122 5.3E-18 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS10350 91016643371dcd5f8993309534206577 370 SUPERFAMILY SSF55961 129 365 2.75E-35 T 29-03-2018 AM474_RS10350 91016643371dcd5f8993309534206577 370 SUPERFAMILY SSF50022 25 142 2.49E-30 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS10350 91016643371dcd5f8993309534206577 370 Gene3D G3DSA:3.90.380.10 123 366 1.1E-37 T 29-03-2018 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 SUPERFAMILY SSF103473 21 430 4.84E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 29 415 4.3E-135 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 Gene3D G3DSA:1.20.1250.20 13 226 8.5E-30 T 29-03-2018 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 Pfam PF07690 Major Facilitator Superfamily 58 376 3.7E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS15090 ef7ff4b6c107f2af303fe6e7547b6582 435 Gene3D G3DSA:1.20.1250.20 227 432 3.6E-27 T 29-03-2018 AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 SUPERFAMILY SSF103473 7 192 3.79E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 SUPERFAMILY SSF103473 251 422 3.79E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 SUPERFAMILY SSF103473 476 500 3.79E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 Gene3D G3DSA:1.20.1250.20 262 503 2.2E-25 T 29-03-2018 AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 494 1.3E-107 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 Pfam PF07690 Major Facilitator Superfamily 19 412 5.9E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25180 6638ee976399c7b307c61ad04aac2c60 503 Gene3D G3DSA:1.20.1250.20 2 203 6.5E-33 T 29-03-2018 AM474_RS20075 1033571216109fce47f5ef175da4b66c 427 Pfam PF00860 Permease family 12 378 1.1E-92 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS20075 1033571216109fce47f5ef175da4b66c 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 407 9.2E-111 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS20075 1033571216109fce47f5ef175da4b66c 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF12833 Helix-turn-helix domain 238 319 3.0E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 Gene3D G3DSA:1.10.10.60 214 266 2.9E-12 T 29-03-2018 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 Pfam PF14525 AraC-binding-like domain 26 199 5.2E-14 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 Gene3D G3DSA:1.10.10.60 267 319 2.2E-16 T 29-03-2018 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 267 318 7.94E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 SMART SM00342 232 317 1.8E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 SUPERFAMILY SSF46689 216 265 2.42E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 9.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 9.5E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10360 2dc50d8bb9ef5819cc4795aab33523dd 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 313 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS28425 bede2eccbc21081021dd6526c0a7d2f6 356 Gene3D G3DSA:3.30.200.20 15 116 4.1E-27 T 29-03-2018 AM474_RS28425 bede2eccbc21081021dd6526c0a7d2f6 356 SUPERFAMILY SSF56112 18 340 1.48E-60 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS28425 bede2eccbc21081021dd6526c0a7d2f6 356 Pfam PF01636 Phosphotransferase enzyme family 38 273 4.5E-50 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS28425 bede2eccbc21081021dd6526c0a7d2f6 356 Gene3D G3DSA:3.90.1200.10 120 355 2.6E-32 T 29-03-2018 AM474_RS08685 4502b45b4ffec3188d8f98d225ebb48a 264 SUPERFAMILY SSF56317 6 258 5.89E-65 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS08685 4502b45b4ffec3188d8f98d225ebb48a 264 Gene3D G3DSA:3.60.110.10 7 264 1.6E-60 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS08685 4502b45b4ffec3188d8f98d225ebb48a 264 Pfam PF00795 Carbon-nitrogen hydrolase 12 249 6.6E-31 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS26655 6d1ebce0ddf712a99bcdc4b07c437724 455 Pfam PF00860 Permease family 22 400 1.0E-99 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS26655 6d1ebce0ddf712a99bcdc4b07c437724 455 TIGRFAM TIGR03173 pbuX: xanthine permease 26 434 1.1E-160 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM474_RS26655 6d1ebce0ddf712a99bcdc4b07c437724 455 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 349 369 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS26655 6d1ebce0ddf712a99bcdc4b07c437724 455 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 432 2.1E-113 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 Gene3D G3DSA:3.40.190.10 178 264 1.1E-19 T 29-03-2018 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.1E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 Gene3D G3DSA:1.10.10.10 1 85 1.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 SUPERFAMILY SSF46785 2 112 7.08E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 Gene3D G3DSA:3.40.190.10 88 177 8.1E-25 T 29-03-2018 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 SUPERFAMILY SSF53850 91 295 7.97E-46 T 29-03-2018 AM474_RS15865 2902b9605fe4132781f6ae87c098b5af 297 Pfam PF03466 LysR substrate binding domain 88 293 4.4E-49 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 PIRSF PIRSF004848 1 228 3.1E-70 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 Pfam PF01168 Alanine racemase, N-terminal domain 9 223 4.3E-34 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 SUPERFAMILY SSF51419 1 221 1.57E-81 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 Gene3D G3DSA:3.20.20.10 1 230 3.7E-74 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS12735 2239967f08b2775c8a97ca07e3cfe807 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 223 2.1E-74 T 29-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:3.40.30.10 1 93 2.5E-28 T 29-03-2018 AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 2.6E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF52833 1 76 1.25E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 Pfam PF00043 Glutathione S-transferase, C-terminal domain 109 189 1.6E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 Gene3D G3DSA:1.20.1050.10 94 200 4.6E-26 T 29-03-2018 AM474_RS27460 a31ab9f96595388412245f0df50e4ee6 200 SUPERFAMILY SSF47616 77 200 6.0E-30 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS30180 f0553ff2b9e714f9fbd611aed83489d9 365 SUPERFAMILY SSF56059 122 255 1.27E-7 T 29-03-2018 AM474_RS30180 f0553ff2b9e714f9fbd611aed83489d9 365 Pfam PF11379 Protein of unknown function (DUF3182) 10 360 1.3E-140 T 29-03-2018 IPR021519 Protein of unknown function DUF3182 AM474_RS30180 f0553ff2b9e714f9fbd611aed83489d9 365 Gene3D G3DSA:3.30.470.20 113 315 4.0E-5 T 29-03-2018 AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 Gene3D G3DSA:3.40.50.1220 277 404 1.2E-42 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 Gene3D G3DSA:3.40.50.620 89 269 6.1E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 SUPERFAMILY SSF52467 281 396 2.17E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 SMART SM00893 95 269 1.8E-5 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 Pfam PF01012 Electron transfer flavoprotein domain 101 244 1.3E-15 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 SUPERFAMILY SSF52402 95 219 1.36E-19 T 29-03-2018 AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 PIRSF PIRSF000089 92 403 2.6E-69 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM474_RS15775 c4b2808ad0508d1214690334658516cf 410 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 283 358 4.6E-24 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00204 DNA gyrase B 217 384 1.4E-38 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 30 45 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 108 122 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 65 78 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 7.4E-59 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 191 212 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 148 163 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 134 148 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 237 260 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 25 38 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 PRINTS PR01098 Topoisomerase IV subunit B signature 173 190 1.3E-116 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.565.10 16 215 6.7E-67 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00433 33 623 1.4E-207 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 623 0.0 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF01751 Toprim domain 412 521 7.5E-13 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF54211 216 381 6.83E-45 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 170 4.0E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 1 627 46.883 T 29-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF55874 4 214 1.69E-68 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.30.230.10 216 390 9.4E-41 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Gene3D G3DSA:3.40.50.670 394 626 8.4E-76 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 SUPERFAMILY SSF56719 387 620 7.59E-76 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 SMART SM00387 26 172 8.6E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18340 bb892b926a4cdda2c050853e35d79aa9 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 6.2E-24 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.605.10 2 263 4.6E-86 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 Gene3D G3DSA:3.40.309.10 264 459 3.2E-62 T 29-03-2018 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 SUPERFAMILY SSF53720 3 483 3.67E-149 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 Pfam PF00171 Aldehyde dehydrogenase family 15 477 5.5E-140 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS14135 279fd18557dcb2de7c978a27209ef2bf 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 1.7E-210 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AM474_RS30960 57db0b079963a2bbcec5bbdcba7e246f 401 Gene3D G3DSA:1.20.1250.20 204 395 1.9E-14 T 29-03-2018 AM474_RS30960 57db0b079963a2bbcec5bbdcba7e246f 401 Gene3D G3DSA:1.20.1250.20 6 203 5.5E-10 T 29-03-2018 AM474_RS30960 57db0b079963a2bbcec5bbdcba7e246f 401 SUPERFAMILY SSF103473 17 389 3.27E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30960 57db0b079963a2bbcec5bbdcba7e246f 401 Pfam PF07690 Major Facilitator Superfamily 20 229 1.3E-8 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 Pfam PF01544 CorA-like Mg2+ transporter protein 41 328 1.9E-56 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF144083 267 329 5.75E-16 T 29-03-2018 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 SUPERFAMILY SSF143865 9 260 2.88E-49 T 29-03-2018 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 265 332 1.4E-19 T 29-03-2018 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:3.30.460.20 2 141 1.7E-14 T 29-03-2018 AM474_RS28105 52470094570ee1232651e4d111f75cb0 332 Gene3D G3DSA:1.20.58.340 142 264 4.8E-18 T 29-03-2018 AM474_RS14675 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 204 400 6.8E-39 T 29-03-2018 AM474_RS14675 28e798fab1488045615d6e039570f443 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 395 5.0E-196 T 29-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14675 28e798fab1488045615d6e039570f443 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 3.0E-46 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS14675 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 74 203 3.4E-38 T 29-03-2018 AM474_RS14675 28e798fab1488045615d6e039570f443 402 Gene3D G3DSA:3.40.50.1100 14 73 8.2E-8 T 29-03-2018 AM474_RS14675 28e798fab1488045615d6e039570f443 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 396 52.811 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14675 28e798fab1488045615d6e039570f443 402 SUPERFAMILY SSF53686 8 394 1.7E-151 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS14675 28e798fab1488045615d6e039570f443 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 29-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14675 28e798fab1488045615d6e039570f443 402 PIRSF PIRSF001413 4 402 5.3E-163 T 29-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF00460 Flagella basal body rod protein 5 35 9.5E-11 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 8.7E-117 T 29-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 5.3E-32 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.2E-49 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 257 3.8E-26 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 SUPERFAMILY SSF117143 92 222 2.48E-36 T 29-03-2018 AM474_RS24285 2aaaa5346e87c49bf9be3dc3a579885b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 PIRSF PIRSF005650 7 245 7.3E-89 T 29-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 Gene3D G3DSA:3.40.1160.10 1 244 4.4E-44 T 29-03-2018 AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 SUPERFAMILY SSF53633 10 242 7.99E-73 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 Pfam PF00696 Amino acid kinase family 13 222 1.0E-26 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 8.9E-99 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM474_RS07630 cbfb8b68f9452577f28cbbc4968e9e3f 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 44.024 T 29-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM474_RS28995 12a7fc58c9dff72e95842ce5785d7500 542 Gene3D G3DSA:3.40.50.300 2 294 3.3E-9 T 29-03-2018 AM474_RS28995 12a7fc58c9dff72e95842ce5785d7500 542 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 416 527 4.2E-14 T 29-03-2018 IPR018760 Protein of unknown function DUF2326 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 SUPERFAMILY SSF75620 12 355 6.28E-135 T 29-03-2018 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 Pfam PF00472 RF-1 domain 216 323 3.5E-42 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 4.6E-167 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.015 T 29-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 SMART SM00937 65 180 1.4E-67 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 Pfam PF03462 PCRF domain 13 205 1.3E-73 T 29-03-2018 IPR005139 Peptide chain release factor GO:0006415 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 Gene3D G3DSA:1.20.58.410 2 95 5.6E-18 T 29-03-2018 AM474_RS19985 9dd36d82ec73896d8306d91384ba7485 360 Gene3D G3DSA:3.30.160.20 211 293 2.0E-34 T 29-03-2018 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 3.9E-89 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 4.6E-99 T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 SUPERFAMILY SSF51366 4 217 7.85E-76 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 PIRSF PIRSF001461 1 224 7.7E-103 T 29-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 Gene3D G3DSA:3.20.20.70 1 220 2.6E-86 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS11590 66d94483da397e4f92f50c44fae48e39 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 29-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Pfam PF13426 PAS domain 154 253 4.0E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Pfam PF13426 PAS domain 36 132 1.5E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 9.7E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 9.7E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 9.7E-25 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Gene3D G3DSA:3.40.50.10600 11 133 4.8E-30 T 29-03-2018 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Gene3D G3DSA:3.40.50.10600 134 255 3.3E-27 T 29-03-2018 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SUPERFAMILY SSF55785 152 252 3.84E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SMART SM00283 226 431 3.2E-16 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 134 7.9E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 260 1.7E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SMART SM00086 212 254 0.029 T 29-03-2018 IPR001610 PAC motif AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SMART SM00086 92 134 1.3E-4 T 29-03-2018 IPR001610 PAC motif AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SUPERFAMILY SSF58104 250 428 1.83E-49 T 29-03-2018 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Gene3D G3DSA:1.10.287.950 256 430 3.3E-40 T 29-03-2018 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 427 5.3E-33 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SMART SM00091 17 87 9.4 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SMART SM00091 139 207 0.0036 T 29-03-2018 IPR000014 PAS domain AM474_RS28965 a90df95e2f15b5570172aac54d52c6d1 431 SUPERFAMILY SSF55785 30 132 9.07E-24 T 29-03-2018 IPR000014 PAS domain AM474_RS18460 5684a283cd8e9ba9a6076879ff3cbce4 82 Pfam PF17209 Hfq protein 7 69 1.8E-31 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM474_RS18460 5684a283cd8e9ba9a6076879ff3cbce4 82 Gene3D G3DSA:2.30.30.100 4 73 5.6E-34 T 29-03-2018 AM474_RS18460 5684a283cd8e9ba9a6076879ff3cbce4 82 SUPERFAMILY SSF50182 7 69 2.31E-24 T 29-03-2018 IPR010920 LSM domain AM474_RS18460 5684a283cd8e9ba9a6076879ff3cbce4 82 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.384 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM474_RS18460 5684a283cd8e9ba9a6076879ff3cbce4 82 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 4.1E-30 T 29-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AM474_RS04590 0e091fee5841e36fb1c8539f03e612c7 359 SUPERFAMILY SSF53474 26 253 1.13E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04590 0e091fee5841e36fb1c8539f03e612c7 359 Pfam PF12740 Chlorophyllase enzyme 61 188 8.3E-14 T 29-03-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 AM474_RS04590 0e091fee5841e36fb1c8539f03e612c7 359 Gene3D G3DSA:3.40.50.1820 16 261 1.3E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS20575 e831dac7cdd0d1fcd0158fd07ba5b028 1158 Pfam PF05567 Neisseria PilC beta-propeller domain 626 997 3.7E-150 T 29-03-2018 IPR008707 PilC beta-propeller domain AM474_RS20575 e831dac7cdd0d1fcd0158fd07ba5b028 1158 SUPERFAMILY SSF50998 667 944 1.39E-8 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS20575 e831dac7cdd0d1fcd0158fd07ba5b028 1158 Gene3D G3DSA:3.40.50.410 43 500 5.7E-34 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 Gene3D G3DSA:1.20.1260.10 2 78 1.7E-15 T 29-03-2018 IPR012347 Ferritin-related AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 Gene3D G3DSA:1.20.5.420 85 139 3.7E-24 T 29-03-2018 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 Pfam PF00210 Ferritin-like domain 8 143 5.4E-40 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.2E-78 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 SUPERFAMILY SSF47240 1 154 7.93E-54 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.0E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 PIRSF PIRSF002560 1 157 2.8E-73 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS06980 e9858ce5bdf1b8029c2df44b2926fcd5 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS13780 947f5aad2cd3bd2b2cabd967fb434c82 478 PIRSF PIRSF000204 1 478 1.9E-217 T 29-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 AM474_RS13780 947f5aad2cd3bd2b2cabd967fb434c82 478 Gene3D G3DSA:3.40.50.1220 304 478 5.2E-83 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS13780 947f5aad2cd3bd2b2cabd967fb434c82 478 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 475 3.6E-191 T 29-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM474_RS13780 947f5aad2cd3bd2b2cabd967fb434c82 478 SUPERFAMILY SSF52467 306 478 6.27E-75 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 ProSitePatterns PS00356 LacI-type HTH domain signature. 37 55 - T 29-03-2018 AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01380 SIS domain 125 252 8.1E-16 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF46689 2 76 2.87E-20 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:1.10.10.10 1 94 5.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Gene3D G3DSA:3.40.50.10490 95 290 9.2E-32 T 29-03-2018 AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 76 2.8E-24 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM474_RS15570 b93eb4b6e1fa0f6a301cd43eacb1ce09 293 SUPERFAMILY SSF53697 84 278 2.43E-37 T 29-03-2018 AM474_RS00720 d2b6f9320b5a3c4990a9210a20ac5b64 506 Pfam PF07916 TraG-like protein, N-terminal region 10 487 9.2E-92 T 29-03-2018 IPR012931 TraG-like, N-terminal AM474_RS17575 30892e75011faa4de2099c54c278de72 205 SUPERFAMILY SSF46689 2 65 3.75E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS17575 30892e75011faa4de2099c54c278de72 205 Gene3D G3DSA:1.10.357.10 2 203 6.4E-31 T 29-03-2018 AM474_RS17575 30892e75011faa4de2099c54c278de72 205 Pfam PF13972 Bacterial transcriptional repressor 56 192 1.3E-31 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR AM474_RS17575 30892e75011faa4de2099c54c278de72 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 1.6E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS17575 30892e75011faa4de2099c54c278de72 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS17575 30892e75011faa4de2099c54c278de72 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.9E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25495 754ec030ab8baea6b129b432a7f7dab2 399 Gene3D G3DSA:1.20.1250.20 201 395 3.8E-22 T 29-03-2018 AM474_RS25495 754ec030ab8baea6b129b432a7f7dab2 399 Pfam PF07690 Major Facilitator Superfamily 14 312 2.1E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25495 754ec030ab8baea6b129b432a7f7dab2 399 Gene3D G3DSA:1.20.1250.20 1 200 1.1E-21 T 29-03-2018 AM474_RS25495 754ec030ab8baea6b129b432a7f7dab2 399 SUPERFAMILY SSF103473 3 388 1.2E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS07485 7e8c75274b20cf78644806a1b57df0f9 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 2.8E-60 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM474_RS07485 7e8c75274b20cf78644806a1b57df0f9 249 Pfam PF01975 Survival protein SurE 3 181 7.9E-55 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM474_RS07485 7e8c75274b20cf78644806a1b57df0f9 249 SUPERFAMILY SSF64167 1 246 4.05E-80 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM474_RS07485 7e8c75274b20cf78644806a1b57df0f9 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 38.027 T 29-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM474_RS07485 7e8c75274b20cf78644806a1b57df0f9 249 Gene3D G3DSA:3.40.1210.10 1 248 6.9E-78 T 29-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM474_RS14400 3c5aa74a2df585607f9ff5646547d130 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 7.4E-158 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS14400 3c5aa74a2df585607f9ff5646547d130 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.8E-160 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 Gene3D G3DSA:1.10.10.10 6 82 1.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 SMART SM00895 95 218 8.8E-21 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 SUPERFAMILY SSF46785 22 89 1.21E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 Pfam PF07729 FCD domain 95 217 5.3E-23 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 SUPERFAMILY SSF48008 91 219 8.11E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 Gene3D G3DSA:1.20.120.530 83 233 4.2E-30 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 SMART SM00345 27 85 7.6E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS26725 3fd86c64ac22b7b68002004116af678c 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 85 4.3E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS09580 f9323fe9c11763fd8107b11aa15c2d5a 422 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 291 3.1E-46 T 29-03-2018 IPR000477 Reverse transcriptase domain AM474_RS09580 f9323fe9c11763fd8107b11aa15c2d5a 422 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 15 380 1.3E-125 T 29-03-2018 IPR030931 Group II intron reverse transcriptase/maturase AM474_RS09580 f9323fe9c11763fd8107b11aa15c2d5a 422 SUPERFAMILY SSF56672 25 297 5.78E-58 T 29-03-2018 AM474_RS09580 f9323fe9c11763fd8107b11aa15c2d5a 422 Gene3D G3DSA:3.30.70.270 107 290 1.3E-30 T 29-03-2018 AM474_RS09580 f9323fe9c11763fd8107b11aa15c2d5a 422 Pfam PF08388 Group II intron, maturase-specific domain 316 390 1.8E-14 T 29-03-2018 IPR013597 Group II intron, maturase-specific AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF00206 Lyase 15 347 4.1E-97 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.40.30 420 467 1.7E-19 T 29-03-2018 AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.9E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.9E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.9E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.9E-28 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 8 467 1.7E-206 T 29-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.10.275.10 5 142 2.3E-53 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 Pfam PF10415 Fumarase C C-terminus 413 465 3.1E-19 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 SUPERFAMILY SSF48557 7 465 1.31E-144 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS15625 a4bdbb1007e4faeaba40299645b7c143 474 Gene3D G3DSA:1.20.200.10 143 419 1.7E-78 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 ProSitePatterns PS01229 Hypothetical cof family signature 2. 685 707 - T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF55008 75 145 2.09E-20 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Gene3D G3DSA:3.40.1110.10 498 647 4.0E-37 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Gene3D G3DSA:3.30.70.100 75 142 1.3E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF81653 289 386 3.27E-26 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Pfam PF00403 Heavy-metal-associated domain 11 69 4.3E-16 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Pfam PF00403 Heavy-metal-associated domain 77 136 2.2E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF56784 540 785 3.51E-60 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF56784 485 504 3.51E-60 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 500 6.9E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 720 6.9E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 685 704 6.9E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 6.9E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 642 6.9E-23 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 765 1.4E-87 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 469 484 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 276 294 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 409 423 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 206 225 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 662 679 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 89 103 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 PRINTS PR00943 Copper-transporting ATPase signature 256 275 4.8E-13 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Gene3D G3DSA:1.20.1110.10 233 497 3.7E-51 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Gene3D G3DSA:1.20.1110.10 648 786 2.0E-35 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 42 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 221 787 2.8E-192 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 488 494 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF81665 734 762 1.05E-15 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF81665 257 286 1.05E-15 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF81665 387 480 1.05E-15 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 10 70 6.3E-9 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 76 137 5.8E-11 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 202 788 1.2E-179 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 SUPERFAMILY SSF55008 6 71 4.71E-18 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Gene3D G3DSA:3.30.70.100 3 74 2.7E-20 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Pfam PF00122 E1-E2 ATPase 287 466 5.0E-56 T 29-03-2018 AM474_RS09350 8ddacc6817f6b4932f43c06407b93543 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 484 699 1.0E-42 T 29-03-2018 AM474_RS27415 1a1a603f7e7f0e52a2ca78f07dbbf248 573 Gene3D G3DSA:3.30.750.24 427 562 8.8E-23 T 29-03-2018 IPR002645 STAS domain AM474_RS27415 1a1a603f7e7f0e52a2ca78f07dbbf248 573 SUPERFAMILY SSF52091 441 552 1.29E-15 T 29-03-2018 IPR002645 STAS domain AM474_RS27415 1a1a603f7e7f0e52a2ca78f07dbbf248 573 Pfam PF01740 STAS domain 439 546 4.8E-18 T 29-03-2018 IPR002645 STAS domain AM474_RS27415 1a1a603f7e7f0e52a2ca78f07dbbf248 573 Pfam PF00916 Sulfate permease family 21 388 2.8E-92 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS27415 1a1a603f7e7f0e52a2ca78f07dbbf248 573 TIGRFAM TIGR00815 sulP: sulfate permease 8 547 6.9E-126 T 29-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AM474_RS13820 e061fc137a52e6b30e9ef534f77222da 241 Pfam PF01569 PAP2 superfamily 120 212 3.2E-12 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS13820 e061fc137a52e6b30e9ef534f77222da 241 SMART SM00014 110 215 0.0055 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS13820 e061fc137a52e6b30e9ef534f77222da 241 Gene3D G3DSA:1.20.144.10 33 236 1.0E-28 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS13820 e061fc137a52e6b30e9ef534f77222da 241 SUPERFAMILY SSF48317 3 232 1.26E-33 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS13820 e061fc137a52e6b30e9ef534f77222da 241 PIRSF PIRSF000897 1 241 4.5E-69 T 29-03-2018 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 AM474_RS10785 b8e3668f796ed3a36c97681798e6f7fe 212 Gene3D G3DSA:2.30.110.10 1 210 7.9E-62 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS10785 b8e3668f796ed3a36c97681798e6f7fe 212 PIRSF PIRSF010372 1 212 7.1E-83 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type AM474_RS10785 b8e3668f796ed3a36c97681798e6f7fe 212 SUPERFAMILY SSF50475 9 192 1.3E-38 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS10785 b8e3668f796ed3a36c97681798e6f7fe 212 Pfam PF04299 Putative FMN-binding domain 1 168 3.9E-64 T 29-03-2018 IPR007396 Transcriptional regulator PAI 2-type AM474_RS16745 11793dfb0708e8b1f29f9316c906e2c0 332 Gene3D G3DSA:3.40.190.10 22 120 1.6E-8 T 29-03-2018 AM474_RS16745 11793dfb0708e8b1f29f9316c906e2c0 332 Gene3D G3DSA:3.40.190.10 121 292 5.1E-32 T 29-03-2018 AM474_RS16745 11793dfb0708e8b1f29f9316c906e2c0 332 SUPERFAMILY SSF53850 24 328 2.08E-79 T 29-03-2018 AM474_RS16745 11793dfb0708e8b1f29f9316c906e2c0 332 PIRSF PIRSF002825 1 332 2.6E-107 T 29-03-2018 IPR026045 Ferric binding protein AM474_RS16745 11793dfb0708e8b1f29f9316c906e2c0 332 Pfam PF13343 Bacterial extracellular solute-binding protein 71 297 2.0E-21 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Gene3D G3DSA:3.30.70.100 80 165 5.1E-25 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF55008 82 148 4.58E-22 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 681 697 5.2E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 709 725 5.2E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 740 765 5.2E-9 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 787 7.9E-93 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF56784 567 816 4.38E-62 T 29-03-2018 IPR023214 HAD-like domain AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF56784 508 528 4.38E-62 T 29-03-2018 IPR023214 HAD-like domain AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 83 143 1.6E-9 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 78 2.3E-11 T 29-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Pfam PF00403 Heavy-metal-associated domain 85 142 1.1E-18 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Pfam PF00403 Heavy-metal-associated domain 18 77 2.2E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Gene3D G3DSA:3.30.70.100 13 79 6.6E-21 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Gene3D G3DSA:3.40.50.1000 635 773 6.6E-46 T 29-03-2018 IPR023214 HAD-like domain AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 223 819 4.3E-181 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF81665 409 504 2.48E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF81665 274 312 2.48E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF81665 758 782 2.48E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 512 518 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Pfam PF00122 E1-E2 ATPase 309 489 9.3E-58 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Gene3D G3DSA:1.20.1110.10 273 524 7.0E-49 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 ProSitePatterns PS01047 Heavy-metal-associated domain. 87 116 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF55008 15 78 6.94E-18 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Gene3D G3DSA:3.40.1110.10 525 634 1.6E-33 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 SUPERFAMILY SSF81653 312 408 1.96E-30 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 Pfam PF00702 haloacid dehalogenase-like hydrolase 507 723 8.9E-42 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 744 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 524 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 645 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 728 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 666 3.7E-29 T 29-03-2018 AM474_RS08330 49d62d267e67a5bbf37bdea10657f830 831 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 241 818 1.4E-189 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 SUPERFAMILY SSF56784 1 229 5.35E-47 T 29-03-2018 IPR023214 HAD-like domain AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 1 200 2.1E-66 T 29-03-2018 IPR006328 L-2-Haloacid dehalogenase GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 5.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 5.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 5.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 5.9E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 Gene3D G3DSA:3.40.50.1000 1 233 8.6E-21 T 29-03-2018 IPR023214 HAD-like domain AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 81 187 1.5E-18 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS22705 1ecc2a623651010d9f3848b7c056930c 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 194 8.3E-12 T 29-03-2018 IPR023214 HAD-like domain AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 Pfam PF13188 PAS domain 173 222 5.6E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:1.10.287.950 300 439 1.1E-19 T 29-03-2018 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:1.10.287.950 440 637 3.2E-49 T 29-03-2018 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 SUPERFAMILY SSF55785 167 275 8.38E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 Gene3D G3DSA:3.30.450.20 158 299 5.4E-14 T 29-03-2018 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 SUPERFAMILY SSF58104 353 634 1.29E-73 T 29-03-2018 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 SMART SM00283 386 633 1.2E-90 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 601 3.1E-54 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 4.1E-56 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 4.1E-56 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 484 511 4.1E-56 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS13890 8bdfe72522470224e597eeb53ff9a78e 679 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 4.1E-56 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS29005 b1411c817b48bfc543871b2164faa265 259 Gene3D G3DSA:3.40.1800.10 3 103 2.5E-7 T 29-03-2018 AM474_RS29005 b1411c817b48bfc543871b2164faa265 259 Pfam PF13391 HNH endonuclease 38 91 2.8E-8 T 29-03-2018 IPR003615 HNH nuclease AM474_RS23915 805f2ef45280929f805fe43ca22c49ee 330 Pfam PF00535 Glycosyl transferase family 2 37 155 5.8E-25 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS23915 805f2ef45280929f805fe43ca22c49ee 330 Gene3D G3DSA:3.90.550.10 18 296 2.1E-43 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS23915 805f2ef45280929f805fe43ca22c49ee 330 SUPERFAMILY SSF53448 34 252 7.72E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07770 4394fbd93de4190c46ccfff3c4c079cd 274 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 252 1.4E-71 T 29-03-2018 AM474_RS07770 4394fbd93de4190c46ccfff3c4c079cd 274 Gene3D G3DSA:3.20.20.60 1 274 3.3E-57 T 29-03-2018 AM474_RS07770 4394fbd93de4190c46ccfff3c4c079cd 274 SUPERFAMILY SSF51621 5 268 3.54E-62 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 Gene3D G3DSA:1.25.40.10 132 222 4.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SUPERFAMILY SSF81901 127 223 1.67E-11 T 29-03-2018 AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SUPERFAMILY SSF81901 37 155 3.84E-19 T 29-03-2018 AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 Gene3D G3DSA:2.60.40.1180 59 131 2.0E-12 T 29-03-2018 AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SMART SM00671 148 180 88.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SMART SM00671 112 147 310.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SMART SM00671 181 213 35.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17440 2c58d2d8a9f1f62af36d0fcdbb44bf56 289 SMART SM00671 74 111 0.012 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS06960 c215aefc354b29767ec74f0847081903 348 SUPERFAMILY SSF51556 3 343 6.43E-147 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS06960 c215aefc354b29767ec74f0847081903 348 Gene3D G3DSA:3.20.20.140 11 345 2.2E-54 T 29-03-2018 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 3.0E-141 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 PIRSF PIRSF001237 1 346 2.2E-140 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 45.008 T 29-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS06960 c215aefc354b29767ec74f0847081903 348 Pfam PF01979 Amidohydrolase family 12 310 4.5E-14 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 Gene3D G3DSA:3.40.190.10 183 269 2.4E-16 T 29-03-2018 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 Gene3D G3DSA:1.10.10.10 2 89 3.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 SUPERFAMILY SSF53850 96 301 3.69E-36 T 29-03-2018 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.6E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 Pfam PF03466 LysR substrate binding domain 94 300 1.0E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 SUPERFAMILY SSF46785 5 116 5.99E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13620 f5255825b794e488d1f71a7c38242b6c 313 Gene3D G3DSA:3.40.190.10 93 182 5.3E-21 T 29-03-2018 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:1.10.10.10 3 54 3.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS20840 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF46785 2 89 3.27E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS20840 724644666e54309d42a01c8caf268db2 157 Gene3D G3DSA:3.30.70.920 56 148 2.2E-26 T 29-03-2018 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM474_RS20840 724644666e54309d42a01c8caf268db2 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 8.8E-23 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS20840 724644666e54309d42a01c8caf268db2 157 SMART SM00344 3 112 5.6E-45 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.0E-19 T 29-03-2018 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.9E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.9E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.9E-17 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS20840 724644666e54309d42a01c8caf268db2 157 SUPERFAMILY SSF54909 63 152 1.47E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 Pfam PF08468 Methyltransferase small domain N-terminal 5 153 1.3E-39 T 29-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 260 266 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 Gene3D G3DSA:3.40.50.150 146 332 7.8E-30 T 29-03-2018 AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 Pfam PF05175 Methyltransferase small domain 161 327 2.6E-54 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 SUPERFAMILY SSF53335 93 306 2.28E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS20185 24281e07ac4ebc5f0a2977eb88098eb9 332 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 331 41.237 T 29-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.1480 3 150 1.2E-69 T 29-03-2018 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.1480 151 211 3.7E-25 T 29-03-2018 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF51735 199 381 1.47E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 PIRSF PIRSF001109 2 469 1.4E-184 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF52283 10 198 8.5E-108 T 29-03-2018 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 SUPERFAMILY SSF52283 382 469 8.5E-108 T 29-03-2018 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 149 1.9E-70 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 SMART SM00996 12 468 1.0E-276 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 SMART SM00997 199 381 4.8E-82 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 461 43.835 T 29-03-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 221 237 - T 29-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 461 2.8E-153 T 29-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 199 381 1.5E-56 T 29-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 29-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AM474_RS12540 52da69c76fbcdb743fff971145cbd520 469 Gene3D G3DSA:3.40.50.1480 212 442 5.9E-60 T 29-03-2018 AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 SUPERFAMILY SSF53850 140 296 1.3E-18 T 29-03-2018 AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 Pfam PF03466 LysR substrate binding domain 139 292 6.4E-14 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 Gene3D G3DSA:1.10.10.10 3 81 5.7E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.0E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 SUPERFAMILY SSF46785 3 78 7.07E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23855 24a8b1dc561ebdbd95ed2831e230073e 332 Gene3D G3DSA:3.40.190.10 166 260 1.4E-9 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 SMART SM00436 122 217 1.9E-35 T 29-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF57783 622 656 1.67E-9 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 SMART SM00493 1 122 2.7E-25 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01751 Toprim domain 3 128 1.5E-16 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 623 657 8.9E-10 T 29-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 653 6.4E-215 T 29-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 SMART SM00437 271 561 1.8E-61 T 29-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 485 615 2.5E-15 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 6.0E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 6.0E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 6.0E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 6.0E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 6.0E-25 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.30.65.10 616 666 1.9E-14 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Pfam PF01131 DNA topoisomerase 151 592 5.9E-110 T 29-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:2.70.20.10 362 484 2.0E-19 T 29-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:1.10.460.10 151 361 7.9E-40 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 Gene3D G3DSA:3.40.50.140 1 150 2.8E-40 T 29-03-2018 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 29-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM474_RS02815 896716f46bfb543eb7064207e19e7d82 676 SUPERFAMILY SSF56712 1 608 7.85E-178 T 29-03-2018 IPR023405 DNA topoisomerase, type IA, core domain AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF46689 1 71 2.31E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.10.60 2 61 2.3E-14 T 29-03-2018 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 Gene3D G3DSA:1.10.357.10 62 181 6.8E-11 T 29-03-2018 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 7.5E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS02060 c0060837d1537e54bec55cd833a15b27 193 SUPERFAMILY SSF48498 76 174 2.36E-23 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 TIGRFAM TIGR00492 alr: alanine racemase 4 356 3.1E-103 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 SMART SM01005 233 357 1.7E-66 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 121 133 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 192 219 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 155 166 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 287 304 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 266 281 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 249 264 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 339 352 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 61 79 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 PRINTS PR00992 Alanine racemase signature 26 42 1.6E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 SUPERFAMILY SSF50621 227 356 1.05E-46 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 SUPERFAMILY SSF51419 8 234 2.62E-68 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 Hamap MF_01201 Alanine racemase. 1 357 34.896 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 Gene3D G3DSA:3.20.20.10 5 203 5.4E-37 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 Gene3D G3DSA:2.40.37.10 204 359 1.2E-61 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.5E-60 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS18540 4e5926abf40833633a80c5d9a98169dd 363 Pfam PF00842 Alanine racemase, C-terminal domain 233 355 2.4E-41 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 Gene3D G3DSA:1.10.10.60 228 276 9.6E-14 T 29-03-2018 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 Gene3D G3DSA:2.60.120.280 10 148 5.0E-15 T 29-03-2018 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 SMART SM00342 188 270 1.7E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 Pfam PF02311 AraC-like ligand binding domain 16 148 8.0E-31 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 SUPERFAMILY SSF46689 175 222 6.54E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 SUPERFAMILY SSF46689 224 274 3.32E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 Pfam PF12833 Helix-turn-helix domain 194 272 3.7E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 SUPERFAMILY SSF51215 16 154 1.2E-27 T 29-03-2018 AM474_RS03770 d8f243a236be4beaf5a52d397cea8d7b 278 Gene3D G3DSA:1.10.10.60 149 227 8.8E-15 T 29-03-2018 AM474_RS23975 2c6d5e6e3b9fe8e8c44801730ccbc1af 328 SUPERFAMILY SSF51412 5 318 1.27E-66 T 29-03-2018 AM474_RS23975 2c6d5e6e3b9fe8e8c44801730ccbc1af 328 Gene3D G3DSA:3.20.20.70 3 322 1.4E-62 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS23975 2c6d5e6e3b9fe8e8c44801730ccbc1af 328 Pfam PF03060 Nitronate monooxygenase 6 311 2.2E-53 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF01568 Molydopterin dinucleotide binding domain 644 754 1.9E-16 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:2.40.40.20 552 768 1.9E-23 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.50.740 378 508 5.5E-19 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF00384 Molybdopterin oxidoreductase 63 452 2.5E-35 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 SUPERFAMILY SSF50692 628 762 2.03E-24 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 58 3.5E-16 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 SUPERFAMILY SSF53706 7 494 7.33E-113 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.50.740 64 153 1.4E-9 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 425 442 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:2.20.25.90 1 63 9.3E-15 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 Gene3D G3DSA:3.40.228.10 154 377 1.3E-41 T 29-03-2018 AM474_RS01430 455c1098990431dacf8d2cc546e01f9c 769 SMART SM00926 6 59 1.3E-12 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS04015 ef87cb800404fbede838058a831ae9f6 349 Gene3D G3DSA:3.30.160.60 303 336 4.7E-15 T 29-03-2018 AM474_RS04015 ef87cb800404fbede838058a831ae9f6 349 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 334 32.143 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM474_RS04015 ef87cb800404fbede838058a831ae9f6 349 Pfam PF02618 YceG-like family 43 327 4.4E-76 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM474_RS04015 ef87cb800404fbede838058a831ae9f6 349 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 329 8.6E-81 T 29-03-2018 IPR003770 Endolytic murein transglycosylase AM474_RS04015 ef87cb800404fbede838058a831ae9f6 349 Gene3D G3DSA:3.30.160.60 79 108 2.9E-8 T 29-03-2018 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 253 492 9.06E-78 T 29-03-2018 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 1.8E-73 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 447 4.4E-56 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 491 2.4E-217 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 54.257 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 248 494 2.3E-74 T 29-03-2018 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 Gene3D G3DSA:3.30.420.40 1 247 1.6E-88 T 29-03-2018 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 SUPERFAMILY SSF53067 4 253 2.85E-93 T 29-03-2018 AM474_RS07240 f0467fa7f80f8f3b03d6e54f21ed5f2a 494 PIRSF PIRSF000538 2 494 3.1E-169 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Gene3D G3DSA:3.30.300.30 398 513 6.9E-23 T 29-03-2018 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Gene3D G3DSA:3.40.50.980 166 314 3.2E-35 T 29-03-2018 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Pfam PF00501 AMP-binding enzyme 18 404 2.0E-72 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 493 1.4E-8 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Gene3D G3DSA:3.40.50.980 1 165 2.3E-27 T 29-03-2018 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 Gene3D G3DSA:2.30.38.10 315 397 1.1E-21 T 29-03-2018 AM474_RS23820 333719f11de143a6e8af71e558e6d101 517 SUPERFAMILY SSF56801 14 505 4.45E-112 T 29-03-2018 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 2.6E-18 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 Gene3D G3DSA:3.40.50.720 1 160 3.6E-31 T 29-03-2018 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 SUPERFAMILY SSF48179 164 287 5.89E-26 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 Gene3D G3DSA:1.10.1040.10 161 290 1.2E-23 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 3.8E-34 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 PIRSF PIRSF000103 1 290 9.1E-76 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS30320 5e346d3bab84623ea11c7cb58d4f813a 291 SUPERFAMILY SSF51735 1 159 4.76E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SMART SM00831 11 84 1.3E-32 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Pfam PF00122 E1-E2 ATPase 121 312 3.6E-52 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Pfam PF00689 Cation transporting ATPase, C-terminus 721 893 3.0E-45 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF56784 330 350 3.2E-62 T 29-03-2018 IPR023214 HAD-like domain AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF56784 490 740 3.2E-62 T 29-03-2018 IPR023214 HAD-like domain AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 6.0E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 6.0E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 6.0E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 511 6.0E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 353 6.7E-41 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 607 728 1.1E-35 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 546 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 1.5E-41 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 78 6.8E-16 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Gene3D G3DSA:1.20.1110.10 572 902 1.3E-90 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF81653 122 229 2.48E-30 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF81660 339 539 1.29E-53 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 650 2.2E-21 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Gene3D G3DSA:2.70.150.10 20 232 2.4E-44 T 29-03-2018 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 Gene3D G3DSA:3.40.1110.10 295 542 1.1E-45 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF81665 232 326 1.57E-121 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF81665 686 898 1.57E-121 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS26205 2b67209be8ca0f6a3322063de0a27f9e 902 SUPERFAMILY SSF81665 11 122 1.57E-121 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Gene3D G3DSA:2.120.10.30 441 756 0.0033 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Gene3D G3DSA:2.120.10.30 758 909 0.079 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 821 861 2.5E-8 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 863 900 3.8E-7 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1261 1293 9.5E-8 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 739 766 5.4E-7 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1037 1067 9.8E-5 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 791 820 5.9E-4 T 29-03-2018 IPR006530 YD repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 SUPERFAMILY SSF69304 812 975 6.02E-10 T 29-03-2018 AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 SUPERFAMILY SSF69304 671 754 6.02E-10 T 29-03-2018 AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF03527 RHS protein 1344 1376 1.0E-13 T 29-03-2018 IPR001826 RHS protein AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Gene3D G3DSA:2.120.10.30 910 1368 0.019 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 SUPERFAMILY SSF69304 1245 1337 2.88E-5 T 29-03-2018 AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 SUPERFAMILY SSF69304 1088 1208 2.88E-5 T 29-03-2018 AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 870 899 7.4E-5 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 739 774 3.7E-7 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 1261 1290 1.9E-5 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 842 877 1.1E-5 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 905 942 8.0E-5 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 1238 1276 2.2E-5 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 801 836 1.7E-7 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 Pfam PF05593 RHS Repeat 1017 1049 5.5E-8 T 29-03-2018 IPR031325 RHS repeat AM474_RS27470 3110633e835e4eb55a501d39025b6905 1614 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1369 1445 1.7E-28 T 29-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 AM474_RS10135 bdabc59ef86cebeec4adebf4aa60e3a6 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 8.4E-54 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10135 bdabc59ef86cebeec4adebf4aa60e3a6 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 1.7E-56 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10135 bdabc59ef86cebeec4adebf4aa60e3a6 158 Gene3D G3DSA:3.40.50.960 3 156 4.7E-62 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10135 bdabc59ef86cebeec4adebf4aa60e3a6 158 SUPERFAMILY SSF52121 5 155 7.2E-61 T 29-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10135 bdabc59ef86cebeec4adebf4aa60e3a6 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 30.962 T 29-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:3.40.190.10 177 267 3.3E-22 T 29-03-2018 AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 Pfam PF03466 LysR substrate binding domain 90 294 1.2E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.2E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 SUPERFAMILY SSF53850 90 300 7.06E-42 T 29-03-2018 AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:3.40.190.10 89 176 1.4E-20 T 29-03-2018 AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 Gene3D G3DSA:1.10.10.10 3 84 1.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10740 c4b61fdf1791b7821809c50801a427c1 307 SUPERFAMILY SSF46785 4 112 1.87E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 PIRSF PIRSF018063 12 177 1.2E-63 T 29-03-2018 IPR014490 DNA-binding protein from starved cells-like AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 PRINTS PR00601 Bacterioferritin signature 73 93 2.1E-6 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 PRINTS PR00601 Bacterioferritin signature 32 51 2.1E-6 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 PRINTS PR00601 Bacterioferritin signature 163 177 2.1E-6 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 SUPERFAMILY SSF47240 31 175 1.26E-37 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 Pfam PF00210 Ferritin-like domain 39 176 1.1E-27 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM474_RS18800 34fd07f6997e55e26f92f58d917e0e9e 177 Gene3D G3DSA:1.20.1260.10 10 177 1.5E-42 T 29-03-2018 IPR012347 Ferritin-related AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00684 DnaJ central domain 149 209 4.1E-14 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 29-03-2018 IPR018253 DnaJ domain, conserved site AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 257 366 1.7E-30 T 29-03-2018 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SMART SM00271 4 62 5.7E-33 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 215 269 6.8E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 116 154 6.8E-21 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF57938 136 213 3.79E-22 T 29-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 3.1E-140 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:1.10.287.110 1 115 1.3E-36 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.10.230.10 149 195 1.2E-13 T 29-03-2018 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 25 40 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 42 62 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 62 81 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 PRINTS PR00625 DnaJ domain signature 7 25 1.7E-33 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Gene3D G3DSA:2.60.260.20 196 256 1.4E-18 T 29-03-2018 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF49493 261 346 3.01E-22 T 29-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 42.81 T 29-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF00226 DnaJ domain 5 67 4.3E-28 T 29-03-2018 IPR001623 DnaJ domain AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 Pfam PF01556 DnaJ C terminal domain 123 335 2.6E-44 T 29-03-2018 IPR002939 Chaperone DnaJ, C-terminal AM474_RS19435 8f9c33742bfb4bbd194ba1b92e9f1e90 377 SUPERFAMILY SSF46565 1 111 2.88E-36 T 29-03-2018 IPR001623 DnaJ domain AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Gene3D G3DSA:3.30.365.10 29 189 1.8E-35 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 SUPERFAMILY SSF56003 320 744 5.82E-115 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Gene3D G3DSA:3.30.365.10 421 569 3.8E-37 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Gene3D G3DSA:3.30.365.10 570 748 2.6E-47 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 599 673 3.2E-14 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 321 583 5.2E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 40 167 2.3E-22 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Gene3D G3DSA:3.30.365.10 320 420 3.1E-21 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 SMART SM01008 204 290 7.7E-21 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 PIRSF PIRSF036389 1 742 2.0E-247 T 29-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 SUPERFAMILY SSF56003 6 235 8.63E-39 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS27180 43c6f187cc26366d38f8495f155208ac 748 Gene3D G3DSA:3.90.1170.50 190 292 6.6E-26 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 SUPERFAMILY SSF50037 263 309 1.28E-6 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 1 309 32.846 T 29-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Pfam PF08279 HTH domain 2 54 5.6E-9 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 SUPERFAMILY SSF46785 3 55 4.62E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Pfam PF03099 Biotin/lipoate A/B protein ligase family 89 201 2.7E-18 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Gene3D G3DSA:2.30.30.100 263 309 1.8E-8 T 29-03-2018 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Gene3D G3DSA:1.10.10.10 1 59 1.7E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 Gene3D G3DSA:3.30.930.10 61 261 3.6E-64 T 29-03-2018 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 73 308 1.1E-56 T 29-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 AM474_RS11275 9159163f444a0e2e5fc9c39479f2a8fd 312 SUPERFAMILY SSF55681 70 260 4.29E-60 T 29-03-2018 AM474_RS18025 2f730fd8778376a39ed48db086d025d5 150 SUPERFAMILY SSF54637 11 145 3.64E-27 T 29-03-2018 IPR029069 HotDog domain AM474_RS18025 2f730fd8778376a39ed48db086d025d5 150 Gene3D G3DSA:3.10.129.10 2 147 1.5E-23 T 29-03-2018 AM474_RS18025 2f730fd8778376a39ed48db086d025d5 150 Pfam PF14539 Domain of unknown function (DUF4442) 13 138 7.7E-20 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AM474_RS15770 c617ce66ad227da6593576795fd68d4e 257 SUPERFAMILY SSF52402 25 217 1.4E-25 T 29-03-2018 AM474_RS15770 c617ce66ad227da6593576795fd68d4e 257 Pfam PF01012 Electron transfer flavoprotein domain 27 185 1.3E-17 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS15770 c617ce66ad227da6593576795fd68d4e 257 SMART SM00893 12 190 1.0E-5 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS15770 c617ce66ad227da6593576795fd68d4e 257 Gene3D G3DSA:3.40.50.620 16 257 3.4E-40 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Pfam PF00297 Ribosomal protein L3 44 182 3.3E-16 T 29-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 40.239 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 1.6E-92 T 29-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 29-03-2018 IPR019926 Ribosomal protein L3, conserved site AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 SUPERFAMILY SSF50447 1 208 1.24E-81 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS11170 c5c86202de5c0ef2ca46c2a2421e4f3d 211 Gene3D G3DSA:4.10.960.10 56 165 3.1E-33 T 29-03-2018 AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 ProSitePatterns PS00523 Sulfatases signature 1. 49 61 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 Gene3D G3DSA:3.30.1120.10 451 535 8.1E-18 T 29-03-2018 AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 SUPERFAMILY SSF53649 3 526 6.25E-151 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 Pfam PF00884 Sulfatase 5 420 2.9E-91 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 Gene3D G3DSA:3.40.720.10 1 450 7.6E-115 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS13855 d50ca2eff851bddb7fcdf92d871d9256 536 ProSitePatterns PS00149 Sulfatases signature 2. 105 115 - T 29-03-2018 IPR024607 Sulfatase, conserved site AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 Pfam PF07581 The GLUG motif 718 741 5.5E-5 T 29-03-2018 IPR011493 GLUG AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 Pfam PF07581 The GLUG motif 647 677 0.0025 T 29-03-2018 IPR011493 GLUG AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 Pfam PF05860 haemagglutination activity domain 53 165 5.3E-27 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 1.2E-8 T 29-03-2018 IPR024973 ESPR domain AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 SUPERFAMILY SSF51126 45 343 5.34E-43 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 SMART SM00912 51 166 4.2E-45 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 88 162 1.3E-27 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS10285 732f6f7503edffef6784d03d9e446c39 1018 Gene3D G3DSA:2.160.20.10 46 350 1.1E-53 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 Gene3D G3DSA:1.10.287.70 150 198 8.5E-14 T 29-03-2018 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 SUPERFAMILY SSF81324 24 234 1.71E-51 T 29-03-2018 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 59 82 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 85 105 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 121 147 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 150 173 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 208 234 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 17 45 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 PRINTS PR00169 Potassium channel signature 179 201 9.5E-30 T 29-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 Pfam PF00520 Ion transport protein 26 235 1.2E-28 T 29-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 Gene3D G3DSA:1.20.5.110 200 236 1.7E-13 T 29-03-2018 AM474_RS26600 adb6c61c484b4b96164dff917f5b1edd 283 Gene3D G3DSA:1.20.120.350 22 149 3.9E-25 T 29-03-2018 AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 SUPERFAMILY SSF46785 7 92 1.18E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:3.40.190.10 185 270 1.8E-20 T 29-03-2018 AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 SUPERFAMILY SSF53850 94 303 1.18E-38 T 29-03-2018 AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 9.9E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:3.40.190.10 97 184 7.2E-14 T 29-03-2018 AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 Pfam PF03466 LysR substrate binding domain 93 300 2.6E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31675 84a48bbcea19a24dbbd8d7ad5376c44d 312 Gene3D G3DSA:1.10.10.10 7 95 1.7E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 Gene3D G3DSA:3.40.190.10 201 297 4.7E-26 T 29-03-2018 AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 SUPERFAMILY SSF53850 28 529 5.27E-147 T 29-03-2018 AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 PIRSF PIRSF002741 19 528 1.0E-116 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 Gene3D G3DSA:3.10.105.10 298 503 1.2E-62 T 29-03-2018 AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 452 2.5E-98 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS20885 34d4435f9aaf1834a9122fe088ee242b 533 Gene3D G3DSA:3.90.76.10 35 200 4.2E-35 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 3.1E-120 T 29-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.50.30.10 357 474 1.6E-35 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.30.470.20 193 356 8.4E-47 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 6.2E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 29-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 PIRSF PIRSF000854 1 791 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 786 0.0 T 29-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF51621 461 786 1.05E-99 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.20.20.60 477 789 6.9E-105 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Gene3D G3DSA:3.30.1490.20 2 192 1.8E-54 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 1.4E-62 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF52009 347 464 5.36E-34 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 7.8E-6 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 7.8E-6 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 7.8E-6 T 29-03-2018 AM474_RS28090 5f743bc959a0ec218f53b001fc9537aa 791 SUPERFAMILY SSF56059 3 384 1.77E-108 T 29-03-2018 AM474_RS23645 bafcc434a653c1eaa03b933cbe30480b 314 Pfam PF00753 Metallo-beta-lactamase superfamily 75 292 5.6E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23645 bafcc434a653c1eaa03b933cbe30480b 314 Gene3D G3DSA:3.60.15.10 23 304 1.4E-39 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23645 bafcc434a653c1eaa03b933cbe30480b 314 SUPERFAMILY SSF56281 63 301 5.24E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23645 bafcc434a653c1eaa03b933cbe30480b 314 SMART SM00849 77 292 1.7E-19 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 Gene3D G3DSA:1.25.40.10 609 725 9.3E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 Gene3D G3DSA:1.25.40.10 223 353 5.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 SUPERFAMILY SSF48452 56 92 7.01E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 SUPERFAMILY SSF48452 267 345 7.01E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 Pfam PF13429 Tetratricopeptide repeat 448 727 7.2E-92 T 29-03-2018 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 Gene3D G3DSA:1.25.40.10 52 222 2.3E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 SUPERFAMILY SSF48452 591 716 1.45E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04540 70fc3ba2e4babc0c802fec5fae217284 1193 Gene3D G3DSA:1.25.40.120 380 608 1.3E-11 T 29-03-2018 AM474_RS04835 19e7cd6c632270b37615ef16d708edfb 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.3E-89 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM474_RS04835 19e7cd6c632270b37615ef16d708edfb 212 SUPERFAMILY SSF52016 1 203 4.12E-63 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS04835 19e7cd6c632270b37615ef16d708edfb 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.554 T 29-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AM474_RS04835 19e7cd6c632270b37615ef16d708edfb 212 Pfam PF00694 Aconitase C-terminal domain 1 132 2.9E-38 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04835 19e7cd6c632270b37615ef16d708edfb 212 Gene3D G3DSA:3.20.19.10 1 184 9.1E-50 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 SUPERFAMILY SSF51182 40 150 7.91E-12 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 Gene3D G3DSA:2.60.120.280 22 174 4.3E-14 T 29-03-2018 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 Gene3D G3DSA:1.10.10.60 240 287 1.6E-12 T 29-03-2018 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 8.2E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 8.2E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 Pfam PF12833 Helix-turn-helix domain 208 286 8.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 Gene3D G3DSA:1.10.10.60 177 238 3.5E-6 T 29-03-2018 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 Pfam PF02311 AraC-like ligand binding domain 32 161 3.1E-8 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 SUPERFAMILY SSF46689 241 287 8.8E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS13545 11641b0928ade837c87438df7ee5c30b 288 SMART SM00342 202 285 3.7E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF52777 306 547 1.25E-79 T 29-03-2018 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF47005 242 286 4.97E-12 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:3.90.1170.30 62 97 0.0061 T 29-03-2018 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:4.10.320.10 248 294 3.4E-17 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00364 Biotin-requiring enzyme 121 192 1.8E-23 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00364 Biotin-requiring enzyme 5 74 3.5E-23 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:2.40.50.100 178 247 9.5E-6 T 29-03-2018 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 4 547 1.2E-266 T 29-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF51230 5 93 6.15E-23 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 SUPERFAMILY SSF51230 118 212 6.41E-23 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF02817 e3 binding domain 247 282 5.6E-15 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 318 546 2.8E-76 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 143 172 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:2.40.50.100 113 177 5.7E-14 T 29-03-2018 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:2.40.50.100 12 61 2.2E-18 T 29-03-2018 AM474_RS18085 4ffba9e51c4e6da9a2eb64cb83d4d1b8 547 Gene3D G3DSA:3.30.559.10 305 547 6.8E-80 T 29-03-2018 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 SUPERFAMILY SSF53474 26 276 3.92E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 156 169 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 110 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 7.0E-8 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 Pfam PF12146 Serine aminopeptidase, S33 67 171 4.3E-15 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 Gene3D G3DSA:3.40.50.1820 25 276 7.3E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 98 109 3.0E-6 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 142 156 3.0E-6 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS07835 a7eee57660654e2b6dd531e3d69ca93d 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 71 79 3.0E-6 T 29-03-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AM474_RS08930 0e1ce59974556434a91faf453650c3ff 100 Gene3D G3DSA:1.10.10.10 6 87 4.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08930 0e1ce59974556434a91faf453650c3ff 100 Pfam PF12840 Helix-turn-helix domain 5 78 5.3E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08930 0e1ce59974556434a91faf453650c3ff 100 SMART SM00418 5 98 1.8E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08930 0e1ce59974556434a91faf453650c3ff 100 SUPERFAMILY SSF46785 2 96 2.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 SUPERFAMILY SSF54373 296 482 5.1E-41 T 29-03-2018 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 PIRSF PIRSF000137 1 548 2.2E-141 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:4.10.450.10 37 104 1.1E-24 T 29-03-2018 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Pfam PF05199 GMC oxidoreductase 396 534 4.6E-38 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Pfam PF00732 GMC oxidoreductase 6 302 1.7E-84 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 Gene3D G3DSA:3.30.560.10 105 497 2.1E-103 T 29-03-2018 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 SUPERFAMILY SSF51905 481 542 6.29E-91 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23650 4dfe65dee065ba225e9e51c0a5bf1b3b 564 SUPERFAMILY SSF51905 5 294 6.29E-91 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25845 537fe15e7803afacb69f1a2f4494f70b 141 Gene3D G3DSA:3.30.70.1060 1 118 1.2E-40 T 29-03-2018 AM474_RS25845 537fe15e7803afacb69f1a2f4494f70b 141 Pfam PF03795 YCII-related domain 1 114 2.9E-31 T 29-03-2018 IPR005545 YCII-related AM474_RS25845 537fe15e7803afacb69f1a2f4494f70b 141 SUPERFAMILY SSF54909 1 118 4.83E-37 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 Gene3D G3DSA:3.20.20.140 187 471 7.3E-36 T 29-03-2018 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 Gene3D G3DSA:2.30.40.10 1 116 4.8E-19 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 Pfam PF07969 Amidohydrolase family 50 532 1.2E-120 T 29-03-2018 IPR013108 Amidohydrolase 3 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 SUPERFAMILY SSF51338 1 62 4.61E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 SUPERFAMILY SSF51338 491 537 4.61E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 Gene3D G3DSA:2.30.40.10 472 540 1.2E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 SUPERFAMILY SSF51556 61 123 2.69E-43 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS01345 eaf08098575231cd0174b5e2a3c5e9ba 612 SUPERFAMILY SSF51556 203 491 2.69E-43 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 534 2.6E-166 T 29-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 SUPERFAMILY SSF103473 12 220 8.5E-20 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 SUPERFAMILY SSF103473 355 579 8.5E-20 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 364 594 1.0E-10 T 29-03-2018 AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 Gene3D G3DSA:1.20.1250.20 2 215 4.9E-17 T 29-03-2018 AM474_RS21430 e125440435a4fea631adba9b7284e34a 594 Pfam PF13000 Acetyl-coenzyme A transporter 1 21 107 2.9E-7 T 29-03-2018 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 Reactome: R-HSA-425397 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 Pfam PF00920 Dehydratase family 66 597 4.9E-162 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 29-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 SUPERFAMILY SSF143975 1 418 6.93E-148 T 29-03-2018 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS05215 f841c0375159c95063d06de619888c9b 608 SUPERFAMILY SSF52016 419 600 8.63E-58 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 PIRSF PIRSF004692 1 324 6.6E-133 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF01380 SIS domain 41 172 3.7E-32 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF00571 CBS domain 217 258 1.0E-4 T 29-03-2018 IPR000644 CBS domain AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Pfam PF00571 CBS domain 277 321 6.0E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Gene3D G3DSA:3.40.50.10490 2 199 8.6E-57 T 29-03-2018 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Gene3D G3DSA:3.10.580.10 200 270 5.9E-9 T 29-03-2018 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 SUPERFAMILY SSF53697 9 322 1.65E-69 T 29-03-2018 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 314 1.6E-113 T 29-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 SMART SM00116 210 258 3.0 T 29-03-2018 IPR000644 CBS domain AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 SMART SM00116 275 323 0.02 T 29-03-2018 IPR000644 CBS domain AM474_RS21100 590f1a6178501813f74dc44b5861d6f0 324 Gene3D G3DSA:3.10.580.10 271 323 4.2E-10 T 29-03-2018 AM474_RS04530 3904a094da34ae4fb305e8f1cbb391e5 455 SUPERFAMILY SSF55781 181 313 1.73E-8 T 29-03-2018 IPR029016 GAF domain-like AM474_RS04530 3904a094da34ae4fb305e8f1cbb391e5 455 Gene3D G3DSA:3.30.450.40 155 319 1.5E-6 T 29-03-2018 IPR029016 GAF domain-like AM474_RS04530 3904a094da34ae4fb305e8f1cbb391e5 455 Pfam PF16963 PelD GGDEF domain 321 444 3.6E-35 T 29-03-2018 IPR031583 PelD, GGDEF domain AM474_RS04530 3904a094da34ae4fb305e8f1cbb391e5 455 Pfam PF13492 GAF domain 181 304 6.4E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 Pfam PF00271 Helicase conserved C-terminal domain 241 344 2.7E-26 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 SMART SM00490 263 344 1.6E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 SUPERFAMILY SSF52540 80 365 3.4E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 Pfam PF00270 DEAD/DEAH box helicase 25 199 3.8E-45 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 SMART SM00487 20 227 8.3E-62 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 SUPERFAMILY SSF52540 24 102 2.92E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 Gene3D G3DSA:3.40.50.300 7 226 4.0E-58 T 29-03-2018 AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 566 50.606 T 29-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 Gene3D G3DSA:3.40.50.300 227 377 5.5E-44 T 29-03-2018 AM474_RS12560 a1f459716171b7425975864fd965f1fa 639 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 SUPERFAMILY SSF51905 1 290 7.2E-79 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 SUPERFAMILY SSF51905 474 533 7.2E-79 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 SUPERFAMILY SSF54373 292 475 1.47E-47 T 29-03-2018 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 Gene3D G3DSA:4.10.450.10 36 103 3.9E-20 T 29-03-2018 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 PIRSF PIRSF000137 1 541 2.0E-133 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 Gene3D G3DSA:3.30.560.10 104 486 6.3E-86 T 29-03-2018 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 Pfam PF00732 GMC oxidoreductase 5 297 4.3E-72 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS00575 f9bfecd8f20c0643f7df5838be01cc61 556 Pfam PF05199 GMC oxidoreductase 389 525 5.1E-37 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS27030 086b732b6b337fdf3f16121589a975dc 381 PIRSF PIRSF016907 2 371 2.0E-145 T 29-03-2018 IPR011386 Putative ATP-NAD kinase AM474_RS27030 086b732b6b337fdf3f16121589a975dc 381 Gene3D G3DSA:3.40.50.10330 1 177 6.9E-18 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM474_RS27030 086b732b6b337fdf3f16121589a975dc 381 SUPERFAMILY SSF111331 91 174 1.46E-5 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM474_RS27030 086b732b6b337fdf3f16121589a975dc 381 Pfam PF01513 ATP-NAD kinase 5 367 7.9E-68 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM474_RS16135 0c066e2e70e9547a7a28a2c737101a64 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.8E-90 T 29-03-2018 IPR005229 Conserved hypothetical protein CHP00255 AM474_RS16135 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.7E-34 T 29-03-2018 IPR013551 Domain of unknown function DUF1732 AM474_RS16135 0c066e2e70e9547a7a28a2c737101a64 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.7E-40 T 29-03-2018 IPR013527 YicC-like, N-terminal AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 Gene3D G3DSA:3.30.450.90 1 99 1.5E-20 T 29-03-2018 AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 1.5E-133 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 SUPERFAMILY SSF52540 4 337 6.59E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 Gene3D G3DSA:3.40.50.300 273 347 1.7E-13 T 29-03-2018 AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 Gene3D G3DSA:3.40.50.300 115 272 1.1E-21 T 29-03-2018 AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 Pfam PF00437 Type II/IV secretion system protein 112 269 3.9E-33 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS12725 b4062eaa38ca5d1b0b065d0e6e01a8ce 382 SMART SM00382 122 247 0.002 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 TIGRFAM TIGR03229 benzo_1_2_benA: benzoate 1,2-dioxygenase, large subunit 9 438 7.7E-262 T 29-03-2018 IPR017639 Benzoate 1,2-dioxygenase, large subunit AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 196 385 3.4E-18 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 60 75 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 30 55 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 102 122 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 148 174 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 81 101 6.1E-46 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 Gene3D G3DSA:3.90.380.10 154 454 4.2E-69 T 29-03-2018 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 Gene3D G3DSA:2.102.10.10 43 153 5.9E-20 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 Pfam PF00355 Rieske [2Fe-2S] domain 45 129 2.7E-20 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 88 111 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 SUPERFAMILY SSF55961 164 445 9.42E-71 T 29-03-2018 AM474_RS32250 e18c1f4b9fbaf3f77680a68a39c900db 455 SUPERFAMILY SSF50022 11 164 1.44E-44 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF53850 39 256 5.91E-51 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00267 797 969 2.1E-71 T 29-03-2018 IPR000160 GGDEF domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF141868 984 1231 6.93E-89 T 29-03-2018 IPR001633 EAL domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF55785 297 424 1.14E-20 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF55073 813 970 4.79E-54 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.40.50.10600 683 801 1.5E-27 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.40.190.10 149 263 4.7E-9 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00091 683 749 6.9E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00091 438 505 1.8E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00091 312 380 0.0043 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00091 562 629 6.6E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 432 4.3E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 687 804 5.5E-20 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 556 5.7E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 560 682 3.3E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF00990 Diguanylate cyclase, GGDEF domain 808 965 6.7E-54 T 29-03-2018 IPR000160 GGDEF domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00062 38 258 9.9E-33 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00086 510 550 3.5 T 29-03-2018 IPR001610 PAC motif AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00086 635 675 83.0 T 29-03-2018 IPR001610 PAC motif AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00086 386 426 1.0E-5 T 29-03-2018 IPR001610 PAC motif AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00086 755 797 5.5E-5 T 29-03-2018 IPR001610 PAC motif AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.40.190.10 22 148 8.4E-23 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 5.0E-37 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.30.450.20 287 427 5.3E-28 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.30.450.20 543 682 1.4E-23 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.30.450.20 428 542 9.8E-17 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 968 1.6E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SMART SM00052 979 1225 1.2E-122 T 29-03-2018 IPR001633 EAL domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF08447 PAS fold 336 408 2.9E-10 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF13426 PAS domain 572 674 2.0E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF13426 PAS domain 448 548 1.3E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF13426 PAS domain 694 795 7.3E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.30.70.270 802 972 5.0E-66 T 29-03-2018 AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF55785 423 548 2.09E-19 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Pfam PF00563 EAL domain 985 1220 1.5E-76 T 29-03-2018 IPR001633 EAL domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 Gene3D G3DSA:3.20.20.450 973 1238 7.2E-101 T 29-03-2018 IPR001633 EAL domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF55785 547 673 2.97E-19 T 29-03-2018 IPR000014 PAS domain AM474_RS11750 7f619510987f5821ddfbade68df9dba9 1245 SUPERFAMILY SSF55785 688 795 5.64E-29 T 29-03-2018 IPR000014 PAS domain AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF52440 3 119 2.52E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.30.1490.20 125 210 2.6E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF56059 89 350 1.61E-69 T 29-03-2018 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF00364 Biotin-requiring enzyme 586 650 3.0E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.30.470.20 211 452 5.1E-108 T 29-03-2018 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 116 8.5E-42 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 SMART SM00878 342 449 1.8E-56 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:3.40.50.20 7 124 1.9E-50 T 29-03-2018 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF51230 573 650 5.89E-22 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 2.9E-79 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 SUPERFAMILY SSF51246 337 454 4.55E-40 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Pfam PF02785 Biotin carboxylase C-terminal domain 342 449 1.5E-37 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS29375 ee727ba94fbb1069d51aa9a2fc8522c3 655 Gene3D G3DSA:2.40.50.100 581 651 3.0E-21 T 29-03-2018 AM474_RS20720 0085b7d1251fae2a66ce48c4f82e45ac 66 Gene3D G3DSA:3.30.50.10 2 60 4.5E-25 T 29-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 AM474_RS20720 0085b7d1251fae2a66ce48c4f82e45ac 66 Pfam PF03884 DNA gyrase inhibitor YacG 7 55 1.6E-26 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM474_RS20720 0085b7d1251fae2a66ce48c4f82e45ac 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 57 19.522 T 29-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AM474_RS20720 0085b7d1251fae2a66ce48c4f82e45ac 66 SUPERFAMILY SSF57716 2 55 1.3E-21 T 29-03-2018 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00005 ABC transporter 504 653 1.1E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.40.50.300 476 719 2.1E-62 T 29-03-2018 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF52540 483 709 3.27E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:1.20.1560.10 149 472 4.1E-37 T 29-03-2018 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 SMART SM00382 513 697 1.3E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF00664 ABC transporter transmembrane region 175 436 1.7E-38 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Gene3D G3DSA:3.90.70.10 17 148 2.9E-41 T 29-03-2018 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 Pfam PF03412 Peptidase C39 family 15 143 4.3E-37 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 SUPERFAMILY SSF90123 163 469 1.11E-56 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS10590 e7a7617665bbd96d2eebf210e34772a1 719 ProSitePatterns PS00211 ABC transporters family signature. 625 639 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20945 904e4656ee8a4632bb272cb7a2b4e98f 549 Pfam PF10062 Predicted secreted protein (DUF2300) 85 207 3.0E-38 T 29-03-2018 IPR018748 Domain of unknown function DUF2300, secreted AM474_RS20945 904e4656ee8a4632bb272cb7a2b4e98f 549 Pfam PF10062 Predicted secreted protein (DUF2300) 413 531 1.4E-43 T 29-03-2018 IPR018748 Domain of unknown function DUF2300, secreted AM474_RS20945 904e4656ee8a4632bb272cb7a2b4e98f 549 Pfam PF08486 Stage II sporulation protein 317 374 9.9E-6 T 29-03-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.40.50.980 511 662 1.3E-38 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF52777 66 262 5.78E-17 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:2.30.38.10 827 905 3.2E-23 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 ProSitePatterns PS00455 Putative AMP-binding domain signature. 657 668 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Pfam PF00501 AMP-binding enzyme 520 915 1.1E-89 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1437 1452 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 541 938 1.6E-117 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 PRINTS PR00154 AMP-binding signature 664 672 5.8E-5 T 29-03-2018 IPR020459 AMP-binding AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 PRINTS PR00154 AMP-binding signature 652 663 5.8E-5 T 29-03-2018 IPR020459 AMP-binding AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.30.300.30 906 990 9.4E-13 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:1.10.1200.10 1392 1488 3.8E-14 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:1.10.10.10 991 1085 7.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF53335 1133 1315 1.02E-15 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.30.300.30 1268 1391 2.6E-10 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF52777 250 492 3.45E-42 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.40.50.980 663 825 7.5E-38 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF47336 1407 1484 1.24E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Pfam PF00975 Thioesterase domain 1586 1797 3.6E-7 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Pfam PF00550 Phosphopantetheine attachment site 1415 1458 6.0E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF53474 1520 1798 9.92E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.30.559.10 24 268 1.8E-16 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Pfam PF08242 Methyltransferase domain 1162 1267 7.2E-9 T 29-03-2018 IPR013217 Methyltransferase type 12 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF56801 506 968 1.1E-132 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 SUPERFAMILY SSF56801 1345 1425 1.1E-132 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.40.50.150 1115 1267 1.6E-9 T 29-03-2018 AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Pfam PF00668 Condensation domain 69 490 7.2E-24 T 29-03-2018 IPR001242 Condensation domain AM474_RS10980 6e153bb1bfd172a5f87634960c6da276 1809 Gene3D G3DSA:3.40.50.1820 1524 1805 1.7E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 Pfam PF00809 Pterin binding enzyme 25 264 8.8E-86 T 29-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 Gene3D G3DSA:3.20.20.20 3 283 1.0E-110 T 29-03-2018 AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 SUPERFAMILY SSF51717 11 279 1.44E-104 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS19485 c244b2ee2a6213a3d2c6c0f4fc22597f 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 278 2.2E-100 T 29-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 PIRSF PIRSF000193 3 270 1.9E-83 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 6.6E-38 T 29-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 27.697 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:1.10.3730.10 165 272 1.5E-41 T 29-03-2018 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF51735 5 160 8.86E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.2E-23 T 29-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 Gene3D G3DSA:3.40.50.720 1 164 2.1E-36 T 29-03-2018 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 2.0E-80 T 29-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 AM474_RS12740 ad56c58e06650dd5a7ac0ee293f01d99 273 SUPERFAMILY SSF48179 162 270 1.87E-35 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS22415 a0f23251a8d15b222a67a909263b132f 427 Gene3D G3DSA:2.40.160.10 5 427 5.2E-131 T 29-03-2018 AM474_RS22415 a0f23251a8d15b222a67a909263b132f 427 Pfam PF03573 outer membrane porin, OprD family 37 425 1.7E-168 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS30755 62e98afbe65d550c571681771e9124e7 223 Gene3D G3DSA:1.10.530.10 57 218 5.0E-18 T 29-03-2018 AM474_RS30755 62e98afbe65d550c571681771e9124e7 223 SUPERFAMILY SSF53955 35 183 2.09E-24 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 PIRSF PIRSF000538 1 471 2.4E-101 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 241 428 1.3E-30 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 215 8.6E-49 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 342 362 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 Gene3D G3DSA:3.30.420.40 229 471 2.2E-48 T 29-03-2018 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 SUPERFAMILY SSF53067 234 470 5.72E-46 T 29-03-2018 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 Gene3D G3DSA:3.30.420.40 2 228 8.0E-64 T 29-03-2018 AM474_RS26555 bbef9ee2656a5234b46fe7c845020200 471 SUPERFAMILY SSF53067 3 235 2.2E-66 T 29-03-2018 AM474_RS08885 7599df1aca4aa5c44379813f0a705b1c 325 Gene3D G3DSA:3.40.50.2300 155 289 9.3E-23 T 29-03-2018 AM474_RS08885 7599df1aca4aa5c44379813f0a705b1c 325 Pfam PF04392 ABC transporter substrate binding protein 32 323 1.5E-123 T 29-03-2018 IPR007487 ABC transporter, substrate-binding protein AM474_RS08885 7599df1aca4aa5c44379813f0a705b1c 325 SUPERFAMILY SSF53822 37 286 1.73E-24 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS08885 7599df1aca4aa5c44379813f0a705b1c 325 Gene3D G3DSA:3.40.50.2300 29 154 1.9E-21 T 29-03-2018 AM474_RS22305 2440d3969005d97146889f868c36eda0 271 Pfam PF16106 Domain of unknown function (DUF4824) 19 265 8.0E-91 T 29-03-2018 IPR032249 Protein of unknown function DUF4824 AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 173 322 4.3E-26 T 29-03-2018 AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 3 309 7.5E-97 T 29-03-2018 IPR011862 Phosphate binding protein GO:0006810 AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 50 172 3.1E-32 T 29-03-2018 AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 Pfam PF12849 PBP superfamily domain 36 295 1.3E-33 T 29-03-2018 IPR024370 PBP domain AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 Gene3D G3DSA:3.40.190.10 17 49 0.26 T 29-03-2018 AM474_RS15960 3ee3011b07dd6d5bbd84285472ca9890 323 SUPERFAMILY SSF53850 37 320 9.86E-72 T 29-03-2018 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 499 599 2.9E-19 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 203 1.4E-31 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Gene3D G3DSA:1.10.1040.10 627 714 1.3E-16 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 SUPERFAMILY SSF51735 316 497 1.55E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 SUPERFAMILY SSF48179 498 640 1.45E-21 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Gene3D G3DSA:3.40.50.720 256 497 8.5E-63 T 29-03-2018 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 496 2.0E-59 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 SUPERFAMILY SSF52096 3 297 1.12E-61 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Gene3D G3DSA:1.10.1040.10 498 604 7.7E-16 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 Gene3D G3DSA:3.90.226.10 2 214 4.4E-48 T 29-03-2018 AM474_RS27910 eeb068e704539fbbf93b922e408b3481 714 SUPERFAMILY SSF48179 622 714 3.4E-18 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27635 4946816ba9149f85a011cc6e84ad9e68 181 Pfam PF03079 ARD/ARD' family 6 165 8.5E-36 T 29-03-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 AM474_RS27635 4946816ba9149f85a011cc6e84ad9e68 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 39.744 T 29-03-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 AM474_RS27635 4946816ba9149f85a011cc6e84ad9e68 181 SUPERFAMILY SSF51182 1 179 4.86E-42 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS27635 4946816ba9149f85a011cc6e84ad9e68 181 Gene3D G3DSA:2.60.120.10 2 157 7.9E-41 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25320 f6b1b51ffaef69069b461673cb02dfe6 526 Gene3D G3DSA:3.40.605.10 6 279 2.2E-48 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS25320 f6b1b51ffaef69069b461673cb02dfe6 526 Gene3D G3DSA:3.40.309.10 280 453 7.3E-23 T 29-03-2018 AM474_RS25320 f6b1b51ffaef69069b461673cb02dfe6 526 Pfam PF00171 Aldehyde dehydrogenase family 37 456 5.6E-47 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS25320 f6b1b51ffaef69069b461673cb02dfe6 526 SUPERFAMILY SSF53720 24 516 3.27E-98 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 51.444 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 PIRSF PIRSF000164 16 342 4.7E-94 T 29-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 29-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 SUPERFAMILY SSF51395 1 336 1.61E-106 T 29-03-2018 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 Gene3D G3DSA:3.20.20.70 1 341 8.6E-88 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 338 1.8E-132 T 29-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM474_RS04475 96d8d405783afd81df91f99516b3669c 342 Pfam PF01180 Dihydroorotate dehydrogenase 44 335 3.7E-87 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 Pfam PF01227 GTP cyclohydrolase I 4 180 1.7E-76 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 3.6E-78 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 SUPERFAMILY SSF55620 3 181 4.74E-79 T 29-03-2018 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:3.30.1130.10 51 181 1.8E-62 T 29-03-2018 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 Gene3D G3DSA:1.10.286.10 2 49 1.6E-19 T 29-03-2018 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 108 118 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS27585 34e6fa3509af1020796fbc27caf66f39 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 37.02 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS24020 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:1.10.439.10 30 189 1.0E-43 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 AM474_RS24020 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:3.60.20.10 265 645 5.5E-91 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS24020 766decd330e43a801085d84fc009ad29 847 Gene3D G3DSA:3.60.20.10 646 836 3.7E-28 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS24020 766decd330e43a801085d84fc009ad29 847 SUPERFAMILY SSF56235 52 840 3.34E-207 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS24020 766decd330e43a801085d84fc009ad29 847 Pfam PF01804 Penicillin amidase 56 833 3.8E-197 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AM474_RS24020 766decd330e43a801085d84fc009ad29 847 PIRSF PIRSF001227 17 842 5.2E-165 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AM474_RS13355 2b87055d5d513308337bbae22802b913 232 Gene3D G3DSA:1.10.10.10 6 94 1.1E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13355 2b87055d5d513308337bbae22802b913 232 Pfam PF12840 Helix-turn-helix domain 10 68 1.4E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13355 2b87055d5d513308337bbae22802b913 232 Gene3D G3DSA:1.10.10.10 106 231 0.37 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13355 2b87055d5d513308337bbae22802b913 232 SMART SM00418 9 88 1.6E-11 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS13355 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 7.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS13355 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 7.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS13355 2b87055d5d513308337bbae22802b913 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 7.5E-5 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS13355 2b87055d5d513308337bbae22802b913 232 SUPERFAMILY SSF46785 9 86 5.45E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 1 255 4.3E-61 T 29-03-2018 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 254 9.3E-45 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 258 500 8.03E-53 T 29-03-2018 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 Gene3D G3DSA:3.30.420.40 256 516 1.6E-49 T 29-03-2018 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 PIRSF PIRSF000538 4 513 2.3E-112 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 SUPERFAMILY SSF53067 6 257 5.29E-57 T 29-03-2018 AM474_RS04335 a577eddb7e20e6d2f4558237dde722f7 519 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 457 5.1E-29 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 Gene3D G3DSA:3.30.70.100 612 709 2.9E-8 T 29-03-2018 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF82861 463 545 1.44E-13 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 Gene3D G3DSA:2.30.30.60 563 611 1.8E-10 T 29-03-2018 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 Pfam PF00924 Mechanosensitive ion channel 504 703 7.7E-39 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF82689 612 712 7.72E-12 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM474_RS17260 624b09a51b744214f9b2c7fa90477e43 735 SUPERFAMILY SSF50182 547 610 1.83E-12 T 29-03-2018 IPR010920 LSM domain AM474_RS20920 fbbef7292287b7290c8316a577468834 186 SMART SM00448 13 124 5.3E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 148 165 2.6E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 165 185 2.6E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 Gene3D G3DSA:3.40.50.2300 7 133 2.9E-29 T 29-03-2018 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 Pfam PF02954 Bacterial regulatory protein, Fis family 148 181 8.0E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 Pfam PF00072 Response regulator receiver domain 16 124 4.7E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS20920 fbbef7292287b7290c8316a577468834 186 SUPERFAMILY SSF52172 13 171 7.97E-33 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS20920 fbbef7292287b7290c8316a577468834 186 Gene3D G3DSA:1.10.10.60 135 181 2.6E-15 T 29-03-2018 AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 162 261 4.4E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 SUPERFAMILY SSF54593 1 136 1.29E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 SUPERFAMILY SSF54593 139 288 1.19E-17 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 240 261 - T 29-03-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 Gene3D G3DSA:3.10.180.10 1 133 4.1E-10 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00390 07e432e98cbae0fddb57271ba53dd57f 314 Gene3D G3DSA:3.10.180.10 136 287 4.6E-12 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS16815 13d9d20befd9524003bafea5c11ef232 527 Pfam PF04262 Glutamate-cysteine ligase 10 377 4.4E-169 T 29-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS16815 13d9d20befd9524003bafea5c11ef232 527 Gene3D G3DSA:3.40.50.300 156 514 8.0E-4 T 29-03-2018 AM474_RS16815 13d9d20befd9524003bafea5c11ef232 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 228.689 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS16815 13d9d20befd9524003bafea5c11ef232 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 517 2.9E-269 T 29-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS16815 13d9d20befd9524003bafea5c11ef232 527 SUPERFAMILY SSF55931 8 514 1.05E-195 T 29-03-2018 AM474_RS07280 ef7f2ec25cc70415bae7dae92885fdd3 328 Pfam PF00561 alpha/beta hydrolase fold 49 299 4.3E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS07280 ef7f2ec25cc70415bae7dae92885fdd3 328 Gene3D G3DSA:3.40.50.1820 26 321 8.5E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07280 ef7f2ec25cc70415bae7dae92885fdd3 328 SUPERFAMILY SSF53474 26 317 9.21E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.7E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:3.40.190.10 179 266 9.3E-20 T 29-03-2018 AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 SUPERFAMILY SSF46785 7 111 1.04E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 SUPERFAMILY SSF53850 90 298 4.16E-40 T 29-03-2018 AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:1.10.10.10 4 84 8.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Pfam PF03466 LysR substrate binding domain 88 295 8.1E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS23060 7b9b6a30dc5c014ce9624c4c5db82c0d 314 Gene3D G3DSA:3.40.190.10 92 178 6.4E-12 T 29-03-2018 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 391 6.0E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SUPERFAMILY SSF55785 75 153 4.01E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Gene3D G3DSA:3.30.565.10 249 393 3.2E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SMART SM00091 75 138 3.2E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Gene3D G3DSA:1.10.287.130 174 243 3.0E-10 T 29-03-2018 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Pfam PF13188 PAS domain 76 130 3.4E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SUPERFAMILY SSF55874 251 394 1.31E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 245 4.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SUPERFAMILY SSF47384 175 245 3.14E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 Gene3D G3DSA:3.30.450.20 56 173 3.0E-12 T 29-03-2018 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SMART SM00387 287 393 3.8E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 SMART SM00388 181 247 5.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 1.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24395 e52d17587e0aaf95a82ab0112ef49568 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 390 1.5E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24380 cd8d587771b50fe735eefcc014aa9560 126 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 2.0E-27 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24380 cd8d587771b50fe735eefcc014aa9560 126 Gene3D G3DSA:1.20.120.340 2 126 1.1E-43 T 29-03-2018 AM474_RS24380 cd8d587771b50fe735eefcc014aa9560 126 SUPERFAMILY SSF101116 8 124 6.28E-39 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24380 cd8d587771b50fe735eefcc014aa9560 126 PIRSF PIRSF039090 1 126 1.4E-43 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24380 cd8d587771b50fe735eefcc014aa9560 126 Pfam PF02561 Flagellar protein FliS 8 124 9.8E-38 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 Gene3D G3DSA:3.40.50.410 616 823 2.6E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 Pfam PF00092 von Willebrand factor type A domain 619 783 8.9E-6 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 SMART SM00327 616 807 2.6E-9 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 SMART SM00220 8 263 3.6E-66 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 14 37 - T 29-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 Gene3D G3DSA:3.30.200.20 5 91 1.3E-22 T 29-03-2018 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 SUPERFAMILY SSF56112 6 339 1.04E-76 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 125 137 - T 29-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 SUPERFAMILY SSF53300 618 796 2.38E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 Gene3D G3DSA:1.10.510.10 92 405 5.4E-51 T 29-03-2018 AM474_RS14425 734d5bfc56a59964cd475b422a066d96 1035 Pfam PF00069 Protein kinase domain 9 250 2.1E-50 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 SUPERFAMILY SSF53623 100 303 2.22E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Gene3D G3DSA:3.90.190.20 310 446 1.5E-39 T 29-03-2018 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 380 1.3E-7 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Pfam PF08245 Mur ligase middle domain 114 285 5.3E-26 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 SUPERFAMILY SSF51984 11 97 5.62E-15 T 29-03-2018 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 445 7.4E-118 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Gene3D G3DSA:3.40.1190.10 99 305 6.6E-56 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 447 34.528 T 29-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 SUPERFAMILY SSF53244 305 447 7.1E-47 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21320 bb704653cd9ab19971d88d840b918925 448 Gene3D G3DSA:3.40.50.720 10 98 5.2E-12 T 29-03-2018 AM474_RS08795 5cf413743d303a07265d1615f1b2f460 182 Pfam PF05433 Glycine zipper 2TM domain 72 113 2.3E-10 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 Gene3D G3DSA:1.10.10.10 1 84 6.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 SUPERFAMILY SSF53850 93 295 4.16E-31 T 29-03-2018 AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 Gene3D G3DSA:3.40.190.10 88 194 8.7E-11 T 29-03-2018 AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 SUPERFAMILY SSF46785 2 83 2.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 Gene3D G3DSA:3.40.190.10 195 304 3.2E-9 T 29-03-2018 AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.8E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03350 52f4fd0019a8b9706e13966919371a5d 310 Pfam PF03466 LysR substrate binding domain 103 296 1.9E-16 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:4.10.1250.10 853 899 0.0016 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:3.30.1360.120 614 750 8.5E-30 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:3.30.1360.120 751 852 5.9E-19 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:2.40.30.110 908 1005 4.0E-20 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 SUPERFAMILY SSF51905 167 455 2.29E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 SUPERFAMILY SSF103025 613 895 2.51E-92 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1004 0.0 T 29-03-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 2.8E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 459 477 2.8E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 2.8E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 907 990 4.5E-11 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 SUPERFAMILY SSF101790 906 1003 1.16E-17 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 172 434 1.5E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:3.50.50.60 352 586 4.0E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 6.3E-23 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 4.5E-8 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 4.5E-8 T 29-03-2018 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Gene3D G3DSA:3.50.50.60 166 351 7.4E-17 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 PIRSF PIRSF037980 1 1004 0.0 T 29-03-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS15685 7a1e0c7fe7ffa3234faecf46658ba800 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 619 884 5.0E-75 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 PIRSF PIRSF500176 33 362 1.1E-77 T 29-03-2018 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 39 47 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 SUPERFAMILY SSF53774 34 361 1.31E-95 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 Gene3D G3DSA:3.40.50.40 248 361 1.4E-23 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 PIRSF PIRSF001220 31 362 5.8E-86 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 Pfam PF00710 Asparaginase, N-terminal 36 227 1.0E-53 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 SMART SM00870 36 356 3.1E-125 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 117 135 2.3E-21 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 295 313 2.3E-21 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 PRINTS PR00139 Asparaginase/glutaminase family signature 37 48 2.3E-21 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 Gene3D G3DSA:3.40.50.1170 32 244 1.5E-51 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 25 362 1.6E-113 T 29-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 AM474_RS25760 d00c0cdd7fd783a288327595cb2d6e0c 362 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 118 128 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF50447 208 304 1.56E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:2.40.30.10 303 396 6.8E-33 T 29-03-2018 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:2.40.30.10 209 302 3.9E-32 T 29-03-2018 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 2.6E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF52540 6 222 4.15E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 SUPERFAMILY SSF50465 301 396 3.74E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.1E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.831 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:3.40.50.300 1 74 2.5E-11 T 29-03-2018 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.2E-15 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 5.9E-227 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11245 833cfb1d858a815fe02652457ae86578 397 Gene3D G3DSA:3.40.50.300 75 206 2.3E-27 T 29-03-2018 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 6.4E-92 T 29-03-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 Pfam PF00813 FliP family 14 211 2.1E-68 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 5.7E-69 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS27685 bd5ef1571d2e73c778154d8771e3343d 219 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 78.039 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PIRSF PIRSF001263 3 156 2.7E-64 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 SUPERFAMILY SSF47413 2 85 5.63E-20 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 Pfam PF02560 Cyanate lyase C-terminal domain 88 154 1.1E-31 T 29-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 TIGRFAM TIGR00673 cynS: cyanase 4 156 8.3E-60 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 SUPERFAMILY SSF55234 88 155 2.09E-28 T 29-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 Gene3D G3DSA:1.10.260.40 1 88 9.5E-10 T 29-03-2018 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 SMART SM01116 83 156 1.7E-45 T 29-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 91 105 5.7E-35 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 141 151 5.7E-35 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 22 37 5.7E-35 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 42 59 5.7E-35 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 PRINTS PR01693 Cyanase signature 109 125 5.7E-35 T 29-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS29575 bc98e82c418935418ecc451efaae2985 156 Gene3D G3DSA:3.30.1160.10 89 155 7.1E-35 T 29-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS22185 e9d02624652723f12a758968f396c650 314 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 195 216 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM474_RS22185 e9d02624652723f12a758968f396c650 314 SUPERFAMILY SSF54534 157 260 1.24E-24 T 29-03-2018 AM474_RS22185 e9d02624652723f12a758968f396c650 314 Pfam PF13145 PPIC-type PPIASE domain 139 270 4.3E-22 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM474_RS22185 e9d02624652723f12a758968f396c650 314 Gene3D G3DSA:3.10.50.40 135 283 3.3E-29 T 29-03-2018 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Gene3D G3DSA:3.40.50.300 457 621 3.8E-22 T 29-03-2018 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 2 948 28.076 T 29-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Gene3D G3DSA:3.40.50.10810 155 372 6.9E-25 T 29-03-2018 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 SUPERFAMILY SSF52540 463 630 2.92E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 SUPERFAMILY SSF52540 270 334 2.92E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 SMART SM00487 149 346 5.0E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Pfam PF00176 SNF2 family N-terminal domain 173 357 2.6E-14 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 SMART SM00490 500 584 1.2E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 SUPERFAMILY SSF52540 152 346 2.2E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Pfam PF12137 RNA polymerase recycling family C-terminal 588 946 2.4E-139 T 29-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 AM474_RS05865 5792d9503494ef1cf237e2bc399a33cb 948 Pfam PF00271 Helicase conserved C-terminal domain 475 584 4.3E-13 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.0E-11 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF57716 108 145 2.71E-10 T 29-03-2018 AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 31.087 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 7.6E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 7.6E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.6E-52 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM474_RS19645 0e7c1ab49f2658f52944309cbfb9f33f 148 SUPERFAMILY SSF109635 11 106 6.8E-34 T 29-03-2018 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 909 1017 5.6E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF00512 His Kinase A (phospho-acceptor) domain 798 864 2.0E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF55785 629 751 1.9E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF47384 781 865 3.53E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.30.450.20 634 783 6.2E-21 T 29-03-2018 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.30.450.20 784 818 2.5E-5 T 29-03-2018 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF52172 1037 1157 1.71E-20 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF12860 PAS fold 644 758 2.1E-45 T 29-03-2018 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Pfam PF00072 Response regulator receiver domain 1041 1151 5.5E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00448 1039 1152 9.5E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00388 798 864 1.4E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SMART SM00387 908 1018 2.2E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.30.565.10 824 1017 7.0E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 Gene3D G3DSA:3.40.50.2300 1023 1159 1.0E-19 T 29-03-2018 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 996 6.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1002 1015 6.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 943 957 6.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 971 6.3E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05655 c50a04cb9586baa48dac84a101561eed 1159 SUPERFAMILY SSF55874 854 1017 2.1E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 1.3E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 1.3E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 1.3E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 1.3E-25 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 Gene3D G3DSA:1.10.240.10 228 328 5.4E-27 T 29-03-2018 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 Pfam PF00579 tRNA synthetases class I (W and Y) 36 325 1.4E-66 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 Gene3D G3DSA:3.40.50.620 5 227 4.8E-63 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 Gene3D G3DSA:3.10.290.10 332 410 7.1E-13 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 8 410 40.383 T 29-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 SUPERFAMILY SSF55174 306 409 7.06E-10 T 29-03-2018 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 409 1.1E-96 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS10560 5b61aea9a6eaa08cd26aa6cbb3e852ff 412 SUPERFAMILY SSF52374 9 322 1.93E-87 T 29-03-2018 AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 Gene3D G3DSA:3.30.450.40 24 137 9.9E-4 T 29-03-2018 IPR029016 GAF domain-like AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 SMART SM00267 136 307 3.8E-58 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 SUPERFAMILY SSF55073 152 305 1.18E-47 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 305 7.1E-49 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 303 2.0E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05115 3f93faa637cedce0fba13bbabe7f34a2 307 Gene3D G3DSA:3.30.70.270 140 307 4.5E-54 T 29-03-2018 AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:1.10.10.10 10 90 1.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 Pfam PF03466 LysR substrate binding domain 95 289 5.8E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 3.3E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:3.40.190.10 99 178 4.1E-6 T 29-03-2018 AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 SUPERFAMILY SSF53850 97 294 4.71E-26 T 29-03-2018 AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 SUPERFAMILY SSF46785 5 118 8.17E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31510 2c3e1f80da236138b000ea9c5d6264cf 306 Gene3D G3DSA:3.40.190.10 179 264 2.2E-16 T 29-03-2018 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF02824 TGS domain 4 61 4.7E-10 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF55681 242 525 2.11E-101 T 29-03-2018 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF81271 3 61 7.52E-15 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF52954 528 632 3.93E-30 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF03129 Anticodon binding domain 540 628 3.7E-19 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.980.10 68 227 3.8E-41 T 29-03-2018 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 3.6E-52 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 3.6E-52 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 3.6E-52 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 3.6E-52 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 3.6E-52 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 3.0E-14 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.30.930.10 228 530 1.6E-123 T 29-03-2018 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 SMART SM00863 169 218 2.1E-20 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.10.20.30 1 64 6.1E-17 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 7.7E-46 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.194 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 8.3E-224 T 29-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 Gene3D G3DSA:3.40.50.800 531 640 6.7E-25 T 29-03-2018 IPR004154 Anticodon-binding AM474_RS01640 d921b147675a8d38f8c8e72b56bd06a5 640 SUPERFAMILY SSF55186 63 240 2.62E-64 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.20.1640.10 280 502 1.2E-47 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 40 142 7.4E-26 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 816 1015 3.79E-44 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82866 290 490 2.22E-48 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 556 653 3.4E-16 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 40 133 6.02E-24 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.70.1430 558 657 3.9E-14 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-78 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 708 791 3.14E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 793 836 6.28E-10 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 666 706 6.28E-10 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:1.20.1640.10 798 1016 1.4E-35 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82714 183 266 3.27E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 707 795 1.7E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Gene3D G3DSA:3.30.2090.10 181 269 2.7E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 Pfam PF00873 AcrB/AcrD/AcrF family 6 1013 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 136 182 1.07E-24 T 29-03-2018 AM474_RS32300 e21399d570b5bde3f4a55ed53515ffc6 1043 SUPERFAMILY SSF82693 268 324 1.07E-24 T 29-03-2018 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 SUPERFAMILY SSF52172 5 134 9.39E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 Pfam PF00072 Response regulator receiver domain 7 120 4.9E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 SMART SM00448 5 120 4.7E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 Gene3D G3DSA:3.40.50.2300 3 136 1.2E-36 T 29-03-2018 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 SUPERFAMILY SSF46894 138 238 3.4E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 Gene3D G3DSA:1.10.10.10 137 244 2.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 237 6.8E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS18255 087745574a11ca179dfde69dbc35da59 244 SMART SM00862 162 237 2.1E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS19720 ebf05538215dd573ecb057f062ee5a6a 297 Gene3D G3DSA:3.40.50.1980 26 132 6.0E-26 T 29-03-2018 AM474_RS19720 ebf05538215dd573ecb057f062ee5a6a 297 Pfam PF01497 Periplasmic binding protein 31 263 2.5E-30 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM474_RS19720 ebf05538215dd573ecb057f062ee5a6a 297 SUPERFAMILY SSF53807 27 286 3.61E-48 T 29-03-2018 AM474_RS19720 ebf05538215dd573ecb057f062ee5a6a 297 Gene3D G3DSA:3.40.50.1980 133 295 6.9E-27 T 29-03-2018 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 2.6E-140 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 SUPERFAMILY SSF103263 4 354 2.49E-148 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 PIRSF PIRSF001456 3 359 8.8E-140 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 Pfam PF01264 Chorismate synthase 10 344 2.9E-139 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 Gene3D G3DSA:3.60.150.10 3 357 1.2E-157 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 37.167 T 29-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS27620 9d408bffe2a7c901e1f4e36aa3c957f1 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 29-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AM474_RS10910 877d7450b24ff61c5aa40704a412f33e 162 SUPERFAMILY SSF54427 19 148 1.43E-24 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS10910 877d7450b24ff61c5aa40704a412f33e 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 14 162 3.0E-85 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS10910 877d7450b24ff61c5aa40704a412f33e 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 1.3E-89 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS10910 877d7450b24ff61c5aa40704a412f33e 162 Gene3D G3DSA:3.10.450.50 10 153 5.5E-15 T 29-03-2018 AM474_RS09750 835ffa8256de2ba522e14377176d4b90 265 Gene3D G3DSA:3.40.1190.20 4 260 1.2E-46 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS09750 835ffa8256de2ba522e14377176d4b90 265 SUPERFAMILY SSF53613 6 255 9.0E-62 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS09750 835ffa8256de2ba522e14377176d4b90 265 Pfam PF08543 Phosphomethylpyrimidine kinase 17 253 5.3E-70 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Gene3D G3DSA:3.30.1020.10 152 212 2.2E-25 T 29-03-2018 AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 PIRSF PIRSF000239 1 209 1.2E-78 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Pfam PF00578 AhpC/TSA family 6 135 5.4E-31 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Gene3D G3DSA:3.40.30.10 1 151 1.3E-39 T 29-03-2018 AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 SUPERFAMILY SSF52833 3 209 4.17E-69 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS06650 59c44b6dc0aabe33fbb0d56cdd1714ad 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 7.5E-12 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 SUPERFAMILY SSF52540 8 252 8.23E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 SMART SM00382 32 230 1.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 Pfam PF00005 ABC transporter 23 182 2.1E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 Gene3D G3DSA:3.40.50.300 4 257 2.1E-72 T 29-03-2018 AM474_RS17085 c73a94fe37e0036f271c8ba150568efd 257 PIRSF PIRSF039085 4 257 2.1E-116 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 Gene3D G3DSA:3.30.470.20 357 470 2.1E-23 T 29-03-2018 AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 Gene3D G3DSA:3.30.1490.20 302 356 7.8E-12 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 Gene3D G3DSA:3.40.50.20 178 301 1.6E-20 T 29-03-2018 AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 Pfam PF08443 RimK-like ATP-grasp domain 286 463 9.7E-9 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 177 6.7E-49 T 29-03-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AM474_RS29030 dbfb25bed1788069e64c1b86315f0464 495 SUPERFAMILY SSF56059 277 484 1.86E-39 T 29-03-2018 AM474_RS01925 c722ae2eb0bd0c7d3d4752c47fd22cff 624 Gene3D G3DSA:1.10.443.10 200 472 7.7E-15 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS01925 c722ae2eb0bd0c7d3d4752c47fd22cff 624 Pfam PF00589 Phage integrase family 272 453 4.8E-9 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS01925 c722ae2eb0bd0c7d3d4752c47fd22cff 624 SUPERFAMILY SSF56349 373 452 3.83E-12 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS01925 c722ae2eb0bd0c7d3d4752c47fd22cff 624 SUPERFAMILY SSF56349 268 339 3.83E-12 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 147 1.6E-54 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 Hamap MF_00821 Protein-export protein SecB [secB]. 1 152 33.454 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 SUPERFAMILY SSF54611 8 148 7.19E-53 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 Pfam PF02556 Preprotein translocase subunit SecB 11 150 2.7E-54 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 80 100 5.6E-37 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 5.6E-37 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 130 148 5.6E-37 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 104 126 5.6E-37 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS17220 3267b9739b18c5a9b84a12c3c68e887c 163 Gene3D G3DSA:3.10.420.10 8 158 2.9E-50 T 29-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 Gene3D G3DSA:3.20.20.370 504 792 4.2E-12 T 29-03-2018 AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 SUPERFAMILY SSF88713 570 787 1.75E-6 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 Gene3D G3DSA:3.20.20.70 41 316 2.2E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 Pfam PF03537 Glycoside-hydrolase family GH114 72 292 1.9E-16 T 29-03-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 PIRSF PIRSF029570 5 948 0.0 T 29-03-2018 IPR016925 Uncharacterised conserved protein UCP029570 AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 SUPERFAMILY SSF51445 52 305 5.9E-36 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 253 263 1.8E-6 T 29-03-2018 IPR016062 Hypothetical protein TM1410-related AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 275 287 1.8E-6 T 29-03-2018 IPR016062 Hypothetical protein TM1410-related AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 147 166 1.8E-6 T 29-03-2018 IPR016062 Hypothetical protein TM1410-related AM474_RS04545 8ce3ce21015b466fcf1340e16533eb4d 948 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 90 109 1.8E-6 T 29-03-2018 IPR016062 Hypothetical protein TM1410-related AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF52402 441 562 9.04E-72 T 29-03-2018 AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF52402 234 388 9.04E-72 T 29-03-2018 AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.60.20.10 1 222 3.7E-51 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 Gene3D G3DSA:3.40.50.620 223 589 2.5E-68 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 SUPERFAMILY SSF56235 1 224 2.74E-60 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF13537 Glutamine amidotransferase domain 47 166 3.1E-43 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 586 0.0 T 29-03-2018 IPR017535 Asparagine synthase family amidotransferase AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 519 2.6E-118 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 PIRSF PIRSF001589 1 589 1.2E-204 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS06700 a07aa27091b66e6bc2cc2096c1af2a99 589 Pfam PF00733 Asparagine synthase 246 584 1.6E-80 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 294 50.146 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 Gene3D G3DSA:3.20.20.60 6 298 1.3E-88 T 29-03-2018 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 SUPERFAMILY SSF51621 8 292 2.02E-100 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 293 8.3E-133 T 29-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 20 256 1.0E-49 T 29-03-2018 AM474_RS22635 38cc00a7ec4f736b2784af4e77e9e71e 298 ProSitePatterns PS00161 Isocitrate lyase signature. 123 128 - T 29-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 8.3E-91 T 29-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 767 873 1.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SMART SM00388 650 718 1.2E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SUPERFAMILY SSF52402 248 358 1.47E-13 T 29-03-2018 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:3.40.50.620 223 360 3.6E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Pfam PF00582 Universal stress protein family 248 358 8.2E-11 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Pfam PF00512 His Kinase A (phospho-acceptor) domain 651 718 4.0E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:3.30.450.40 488 639 2.7E-8 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SUPERFAMILY SSF55874 708 876 1.7E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:1.10.287.130 640 712 7.5E-16 T 29-03-2018 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 851 8.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 799 813 8.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 871 8.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 817 827 8.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SMART SM00387 762 874 8.6E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:3.40.50.300 18 154 1.4E-17 T 29-03-2018 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:3.30.565.10 713 874 1.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SUPERFAMILY SSF55781 495 637 3.05E-5 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Gene3D G3DSA:1.20.120.620 389 487 3.9E-25 T 29-03-2018 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 SUPERFAMILY SSF47384 646 719 1.9E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27355 532b350f8e17e0666ab971ae4e186bf6 885 Pfam PF13493 Domain of unknown function (DUF4118) 390 494 2.3E-26 T 29-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain AM474_RS29825 7d81ab5f0749ac5cbff9119ad7668262 309 Pfam PF07859 alpha/beta hydrolase fold 76 276 8.9E-59 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM474_RS29825 7d81ab5f0749ac5cbff9119ad7668262 309 Gene3D G3DSA:3.40.50.1820 41 304 6.4E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29825 7d81ab5f0749ac5cbff9119ad7668262 309 SUPERFAMILY SSF53474 48 296 6.54E-56 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29825 7d81ab5f0749ac5cbff9119ad7668262 309 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 - T 29-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 AM474_RS29825 7d81ab5f0749ac5cbff9119ad7668262 309 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 144 156 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.10.450.70 21 84 2.6E-20 T 29-03-2018 AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 29 82 3.8E-18 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 ProSitePatterns PS00194 Thioredoxin family active site. 122 140 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 Pfam PF13098 Thioredoxin-like domain 114 237 9.8E-27 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF54423 25 86 1.24E-13 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 SUPERFAMILY SSF52833 96 236 1.16E-36 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08050 6458846b6e28ed42340cc963a0c4eea0 242 Gene3D G3DSA:3.40.30.10 110 242 9.8E-26 T 29-03-2018 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 Pfam PF02107 Flagellar L-ring protein 44 230 3.3E-61 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 228 31.326 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 207 221 4.4E-26 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 170 186 4.4E-26 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 66 78 4.4E-26 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 191 205 4.4E-26 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS24290 15cae870d2995e3813d2677c278f3010 231 PRINTS PR01008 Flagellar L-ring protein signature 144 159 4.4E-26 T 29-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 AM474_RS14555 678269bd9da39ccac9622bd8bcf14053 553 SUPERFAMILY SSF53182 210 335 6.54E-11 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM474_RS14555 678269bd9da39ccac9622bd8bcf14053 553 SUPERFAMILY SSF53182 380 401 6.54E-11 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM474_RS14555 678269bd9da39ccac9622bd8bcf14053 553 SUPERFAMILY SSF53182 459 507 6.54E-11 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM474_RS14555 678269bd9da39ccac9622bd8bcf14053 553 Gene3D G3DSA:3.40.630.20 205 539 5.6E-27 T 29-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:2.40.50.100 209 405 5.9E-7 T 29-03-2018 AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 117 337 5.6E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 97 419 7.6E-77 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 SUPERFAMILY SSF111369 108 344 5.75E-94 T 29-03-2018 AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 Gene3D G3DSA:2.40.50.100 121 208 2.0E-15 T 29-03-2018 AM474_RS12575 225c22e06b0519d5e10a78f392d4b3d8 442 Pfam PF00529 HlyD membrane-fusion protein of T1SS 119 405 6.0E-9 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS07760 d3b83d61848e414fee687beaa14b71b6 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 9 256 40.087 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM474_RS07760 d3b83d61848e414fee687beaa14b71b6 261 SUPERFAMILY SSF53335 14 256 1.91E-76 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS07760 d3b83d61848e414fee687beaa14b71b6 261 Pfam PF04445 Putative SAM-dependent methyltransferase 33 254 2.8E-92 T 29-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 AM474_RS07760 d3b83d61848e414fee687beaa14b71b6 261 Gene3D G3DSA:3.40.50.150 65 260 6.6E-42 T 29-03-2018 AM474_RS21980 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 150 281 1.4E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS21980 512bee9b822b933ccc48ab157463449c 296 Pfam PF00892 EamA-like transporter family 3 135 2.2E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS21980 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 185 286 7.59E-15 T 29-03-2018 AM474_RS21980 512bee9b822b933ccc48ab157463449c 296 SUPERFAMILY SSF103481 36 138 2.09E-10 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 Gene3D G3DSA:3.60.120.10 3 392 4.9E-80 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 1.6E-25 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 Pfam PF00425 chorismate binding enzyme 122 381 3.4E-47 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 Gene3D G3DSA:3.40.50.880 435 626 6.2E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 SUPERFAMILY SSF56322 66 390 3.14E-67 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 29-03-2018 AM474_RS10925 4f1a8444208438a6560d97e2e02804cf 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 SUPERFAMILY SSF55874 306 427 8.7E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 SMART SM00388 235 299 7.4E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 SMART SM00387 339 430 0.0054 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 SUPERFAMILY SSF47384 218 295 1.77E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 Gene3D G3DSA:3.30.565.10 304 431 4.3E-12 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 297 2.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS04605 5ceec91702325d2f26b6de48e803c3ea 431 Gene3D G3DSA:1.10.287.130 226 295 5.3E-12 T 29-03-2018 AM474_RS30520 34adcf19def7b44b866215d44e1d9162 455 SUPERFAMILY SSF51905 361 421 1.29E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30520 34adcf19def7b44b866215d44e1d9162 455 SUPERFAMILY SSF51905 39 262 1.29E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30520 34adcf19def7b44b866215d44e1d9162 455 Pfam PF01266 FAD dependent oxidoreductase 41 400 1.0E-52 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS30520 34adcf19def7b44b866215d44e1d9162 455 Gene3D G3DSA:3.50.50.60 30 423 6.3E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 233 6.0E-20 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF56645 1 258 1.44E-72 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:2.40.110.10 133 249 4.5E-35 T 29-03-2018 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 6.7E-18 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.20.140.10 250 407 9.0E-40 T 29-03-2018 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 393 1.9E-32 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 Gene3D G3DSA:1.10.540.10 1 132 4.6E-36 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00045 488bf81bed2c3378330cfc07d7968401 409 SUPERFAMILY SSF47203 243 401 3.87E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.8E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 Pfam PF03466 LysR substrate binding domain 89 293 4.6E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 Gene3D G3DSA:1.10.10.10 2 85 1.6E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 SUPERFAMILY SSF46785 4 113 3.53E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 Gene3D G3DSA:3.40.190.10 176 262 1.2E-22 T 29-03-2018 AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 Gene3D G3DSA:3.40.190.10 87 175 1.5E-20 T 29-03-2018 AM474_RS28590 2d44f02b37a2aa2edf482e33654c84e9 295 SUPERFAMILY SSF53850 90 294 8.32E-43 T 29-03-2018 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 624 6.5E-266 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 625 46.182 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 1.2E-120 T 29-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 SUPERFAMILY SSF52518 321 508 1.23E-56 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Gene3D G3DSA:3.40.50.970 6 303 3.2E-81 T 29-03-2018 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 SUPERFAMILY SSF52922 496 625 3.93E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Gene3D G3DSA:3.40.50.920 500 626 1.5E-34 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Gene3D G3DSA:3.40.50.970 304 491 2.3E-59 T 29-03-2018 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Pfam PF02779 Transketolase, pyrimidine binding domain 325 485 1.8E-37 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 ProSitePatterns PS00802 Transketolase signature 2. 430 446 - T 29-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 Pfam PF02780 Transketolase, C-terminal domain 500 616 4.9E-27 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 SUPERFAMILY SSF52518 15 206 7.41E-77 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 SUPERFAMILY SSF52518 250 386 7.41E-77 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10090 3269ab9f61f7497bc2989c513c0e1d5e 627 SMART SM00861 324 488 8.8E-63 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 SUPERFAMILY SSF111369 43 195 1.57E-22 T 29-03-2018 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 Gene3D G3DSA:1.10.287.470 130 158 0.017 T 29-03-2018 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 Pfam PF13533 Biotin-lipoyl like 45 90 2.7E-16 T 29-03-2018 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 228 1.1E-34 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 Pfam PF13437 HlyD family secretion protein 155 235 3.6E-10 T 29-03-2018 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 Gene3D G3DSA:2.40.50.100 159 288 7.3E-6 T 29-03-2018 AM474_RS09185 d3341be84b317df8f4f47e51db01a257 302 Gene3D G3DSA:2.40.50.100 45 116 4.1E-16 T 29-03-2018 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 Gene3D G3DSA:2.40.230.20 23 282 4.7E-57 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 2.4E-14 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 175 198 2.4E-14 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 143 168 2.4E-14 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 2.4E-14 T 29-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 SUPERFAMILY SSF111364 33 282 7.85E-74 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS14060 14f1a8b97eea2da77fe1ed131cef7774 282 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 282 1.6E-76 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Pfam PF00664 ABC transporter transmembrane region 31 306 2.9E-49 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SMART SM00382 382 575 4.6E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Gene3D G3DSA:3.40.50.300 343 598 1.0E-76 T 29-03-2018 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Gene3D G3DSA:1.20.1560.10 10 342 7.5E-67 T 29-03-2018 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SUPERFAMILY SSF52540 347 591 1.44E-94 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 Pfam PF00005 ABC transporter 373 523 2.3E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 15 595 7.0E-257 T 29-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 AM474_RS18185 6c2f24906ebfd1ff46d75e1a4c05c2db 603 SUPERFAMILY SSF90123 18 338 9.16E-72 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:1.10.3650.10 363 434 6.0E-31 T 29-03-2018 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 5.6E-30 T 29-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 SUPERFAMILY SSF54862 1 487 8.37E-178 T 29-03-2018 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:3.30.70.20 236 362 4.6E-29 T 29-03-2018 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 0.0 T 29-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:3.30.70.20 198 235 9.8E-20 T 29-03-2018 AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Pfam PF13247 4Fe-4S dicluster domain 175 271 8.0E-38 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS09085 2c26f2cfc5d8690160053118267388eb 513 Gene3D G3DSA:3.30.70.20 5 197 5.2E-29 T 29-03-2018 AM474_RS11640 1ebfc759e60116f826a4991321a33a43 224 Pfam PF00483 Nucleotidyl transferase 2 117 2.8E-15 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS11640 1ebfc759e60116f826a4991321a33a43 224 SUPERFAMILY SSF53448 1 220 1.04E-56 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS11640 1ebfc759e60116f826a4991321a33a43 224 Gene3D G3DSA:3.90.550.10 1 224 1.6E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 169 2.8E-53 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52518 3 179 2.54E-48 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 319 8.1E-30 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.970 336 532 2.3E-42 T 29-03-2018 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.970 1 177 4.2E-50 T 29-03-2018 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 7.0E-39 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52467 154 335 1.8E-38 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 SUPERFAMILY SSF52518 356 534 2.95E-58 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS10770 7bb1b847a5887a7a2133656ae53634a7 547 Gene3D G3DSA:3.40.50.1220 178 335 2.5E-33 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00679 Elongation factor G C-terminus 402 487 7.4E-19 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.870 291 370 5.3E-29 T 29-03-2018 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.8E-14 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 295 373 1.47E-18 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.6E-51 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF54980 403 496 4.65E-24 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.40.50.300 3 188 2.6E-35 T 29-03-2018 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 175 3.0E-18 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 2.1E-10 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 SUPERFAMILY SSF52540 3 235 5.7E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 302.884 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:3.30.70.240 392 552 3.2E-27 T 29-03-2018 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 8.6E-51 T 29-03-2018 IPR013842 GTP-binding protein LepA, C-terminal AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 Gene3D G3DSA:2.40.30.10 191 290 6.8E-24 T 29-03-2018 AM474_RS22480 e2fbd012fd7dcc8c3de2da414169ebe4 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 2.7E-295 T 29-03-2018 IPR006297 Elongation factor 4 GO:0005525 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 Gene3D G3DSA:1.25.40.20 20 94 1.4E-18 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 Pfam PF13857 Ankyrin repeats (many copies) 54 103 1.2E-7 T 29-03-2018 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 SMART SM00248 65 94 0.0063 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 SMART SM00248 98 127 34.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 SMART SM00248 32 61 620.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 SMART SM00248 131 160 16.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 SUPERFAMILY SSF48403 36 168 1.71E-30 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS20275 9b8525b809a9422c7d16188ff5f4d836 183 Gene3D G3DSA:1.25.40.20 95 175 6.0E-20 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS02620 6af0970088af234871bcda7d5ee878d8 134 Gene3D G3DSA:3.10.129.10 5 134 1.7E-30 T 29-03-2018 AM474_RS02620 6af0970088af234871bcda7d5ee878d8 134 SUPERFAMILY SSF54637 5 133 1.93E-31 T 29-03-2018 IPR029069 HotDog domain AM474_RS02620 6af0970088af234871bcda7d5ee878d8 134 Pfam PF13279 Thioesterase-like superfamily 14 133 2.1E-14 T 29-03-2018 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00267 460 629 1.7E-56 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.450.40 155 349 6.0E-20 T 29-03-2018 IPR029016 GAF domain-like AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 624 1.6E-39 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.20.20.450 638 895 1.3E-103 T 29-03-2018 IPR001633 EAL domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.70.270 486 637 2.3E-50 T 29-03-2018 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.450.20 350 485 1.3E-28 T 29-03-2018 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00086 418 460 8.1E-7 T 29-03-2018 IPR001610 PAC motif AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 467 628 2.2E-35 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 346 466 1.1E-17 T 29-03-2018 IPR000014 PAS domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Pfam PF00563 EAL domain 645 880 2.1E-78 T 29-03-2018 IPR001633 EAL domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Pfam PF01590 GAF domain 193 332 7.5E-13 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55781 195 335 3.05E-19 T 29-03-2018 IPR029016 GAF domain-like AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF141868 644 892 8.11E-92 T 29-03-2018 IPR001633 EAL domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00052 639 885 2.7E-123 T 29-03-2018 IPR001633 EAL domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Pfam PF13426 PAS domain 358 459 7.6E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55073 476 630 1.1E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 Gene3D G3DSA:3.30.450.20 33 154 1.0E-4 T 29-03-2018 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00065 192 343 5.2E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00091 346 412 3.8E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SMART SM00091 24 87 59.0 T 29-03-2018 IPR000014 PAS domain AM474_RS18075 ed940021801deaa2d02354e4b7b43534 899 SUPERFAMILY SSF55785 352 458 3.22E-22 T 29-03-2018 IPR000014 PAS domain AM474_RS26250 cf0814209b547b371a6bdf6e478e5ea6 81 Pfam PF11431 Membrane transport protein MerF 24 67 6.0E-26 T 29-03-2018 IPR021091 Mercury ion transport, MerF AM474_RS26250 cf0814209b547b371a6bdf6e478e5ea6 81 Gene3D G3DSA:1.10.287.910 24 67 7.8E-25 T 29-03-2018 AM474_RS01775 cf0814209b547b371a6bdf6e478e5ea6 81 Pfam PF11431 Membrane transport protein MerF 24 67 6.0E-26 T 29-03-2018 IPR021091 Mercury ion transport, MerF AM474_RS01775 cf0814209b547b371a6bdf6e478e5ea6 81 Gene3D G3DSA:1.10.287.910 24 67 7.8E-25 T 29-03-2018 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 PIRSF PIRSF000409 2 358 1.3E-141 T 29-03-2018 IPR016221 Bifunctional regulatory protein Ada AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Gene3D G3DSA:1.10.10.10 272 357 4.9E-34 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Gene3D G3DSA:3.40.10.10 7 82 8.0E-25 T 29-03-2018 IPR035451 Ada-like domain AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 SMART SM00342 105 188 5.2E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Gene3D G3DSA:3.30.160.70 189 271 2.8E-20 T 29-03-2018 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Pfam PF02805 Metal binding domain of Ada 16 77 8.9E-30 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 SUPERFAMILY SSF46689 90 137 9.86E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Pfam PF12833 Helix-turn-helix domain 111 189 7.3E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 326 332 - T 29-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 SUPERFAMILY SSF53155 196 274 1.37E-21 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Gene3D G3DSA:1.10.10.60 143 188 5.2E-5 T 29-03-2018 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Gene3D G3DSA:1.10.10.60 85 142 8.3E-18 T 29-03-2018 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 277 356 3.6E-32 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 SUPERFAMILY SSF46767 275 356 2.35E-30 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 276 355 7.5E-34 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS29895 2901e0ed3abbc0d69e93495f5b6d0821 358 SUPERFAMILY SSF57884 10 97 6.67E-29 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 Gene3D G3DSA:3.60.15.10 2 275 2.5E-50 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 397 459 1.6E-16 T 29-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 SMART SM01027 255 383 2.6E-56 T 29-03-2018 IPR022712 Beta-Casp domain AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 Pfam PF00753 Metallo-beta-lactamase superfamily 13 227 6.6E-12 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 SUPERFAMILY SSF56281 3 467 2.98E-130 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 SMART SM00849 14 250 2.1E-25 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS07425 2c749acffd136e7d4d360e5c4d00ff2d 467 Pfam PF10996 Beta-Casp domain 255 383 8.5E-26 T 29-03-2018 IPR022712 Beta-Casp domain AM474_RS13225 6a16a763926a27df7b16c4098fbdf5b5 289 SUPERFAMILY SSF161098 3 261 3.36E-50 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13225 6a16a763926a27df7b16c4098fbdf5b5 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 262 1.1E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13225 6a16a763926a27df7b16c4098fbdf5b5 289 Gene3D G3DSA:1.10.3720.10 3 268 2.3E-39 T 29-03-2018 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Gene3D G3DSA:1.10.8.60 350 561 1.6E-35 T 29-03-2018 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SUPERFAMILY SSF81923 20 128 1.02E-10 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 9.4E-10 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 660 678 2.0E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 689 707 2.0E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 722 736 2.0E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.0E-33 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Gene3D G3DSA:1.10.8.60 784 874 1.8E-9 T 29-03-2018 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Gene3D G3DSA:3.40.50.300 566 781 1.0E-37 T 29-03-2018 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 787 853 1.4E-10 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 865 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SMART SM01086 782 874 4.6E-8 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 776 8.2E-42 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Gene3D G3DSA:1.10.1780.10 7 151 2.8E-18 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SUPERFAMILY SSF52540 167 544 3.38E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SUPERFAMILY SSF52540 560 857 1.56E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SMART SM00382 205 350 1.3E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 SMART SM00382 611 772 2.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 645 663 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Gene3D G3DSA:3.40.50.300 164 349 1.6E-22 T 29-03-2018 AM474_RS27525 c72bacf1d5e444c0b4b9167e2352dff7 877 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 29 75 3.1E-4 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 31 108 2.9E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 PIRSF PIRSF000005 2 215 1.8E-60 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 SUPERFAMILY SSF46626 123 212 4.93E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 Pfam PF00034 Cytochrome c 128 213 9.9E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 Gene3D G3DSA:1.10.760.10 112 213 9.2E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 Gene3D G3DSA:1.10.760.10 18 111 2.5E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30900 b96c46933b943725d350d4a0505acbaa 215 SUPERFAMILY SSF46626 11 112 5.79E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:3.40.50.2300 775 918 9.7E-37 T 29-03-2018 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF55874 461 633 5.11E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF07696 7TMR-DISM extracellular 2 36 168 2.3E-32 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:3.30.565.10 476 643 3.7E-52 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF52172 789 913 1.71E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 472 1.8E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00448 789 907 3.4E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 3.0E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 3.0E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 3.0E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 3.0E-18 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF07695 7TM diverse intracellular signalling 183 383 5.3E-35 T 29-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00388 407 472 2.6E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SMART SM00387 519 635 8.2E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Gene3D G3DSA:1.10.287.130 397 468 1.2E-18 T 29-03-2018 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF00072 Response regulator receiver domain 791 907 7.5E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 SUPERFAMILY SSF47384 395 473 3.73E-20 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS06715 1bc1e07410d41a01518432c8d36ed910 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 519 634 2.4E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF53955 120 279 1.13E-41 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 420 462 1.44E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:1.10.530.10 37 264 1.4E-32 T 29-03-2018 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 140 168 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF06474 MltD lipid attachment motif 1 34 1.1E-15 T 29-03-2018 IPR010511 Lytic murein transglycosylase D , lipid attachment domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 407 479 2.1E-15 T 29-03-2018 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 276 339 0.0077 T 29-03-2018 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 480 534 2.2E-13 T 29-03-2018 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Gene3D G3DSA:3.10.350.10 347 394 6.4E-15 T 29-03-2018 AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 349 393 3.79E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SUPERFAMILY SSF54106 484 528 1.83E-10 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 420 463 3.2E-15 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 485 528 2.2E-8 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 SMART SM00257 350 393 8.3E-14 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 486 526 1.2E-8 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 421 462 9.2E-14 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01476 LysM domain 351 393 9.4E-13 T 29-03-2018 IPR018392 LysM domain AM474_RS28340 836a8a190e5724b747b049e7de6e78a2 534 Pfam PF01464 Transglycosylase SLT domain 131 230 4.3E-25 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS13680 0dccd6378f7f3d3e5b73e1f36066a457 460 Gene3D G3DSA:3.90.1150.10 2 185 8.1E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS13680 0dccd6378f7f3d3e5b73e1f36066a457 460 Pfam PF00202 Aminotransferase class-III 39 447 5.8E-81 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13680 0dccd6378f7f3d3e5b73e1f36066a457 460 Gene3D G3DSA:3.40.640.10 196 348 1.6E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS13680 0dccd6378f7f3d3e5b73e1f36066a457 460 SUPERFAMILY SSF53383 18 447 1.04E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS13680 0dccd6378f7f3d3e5b73e1f36066a457 460 PIRSF PIRSF000521 40 452 1.3E-22 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS09095 b265ef03eee2d5d9bacc977c6f17e420 468 Gene3D G3DSA:1.20.1250.20 246 466 1.2E-22 T 29-03-2018 AM474_RS09095 b265ef03eee2d5d9bacc977c6f17e420 468 Pfam PF07690 Major Facilitator Superfamily 46 378 1.2E-12 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS09095 b265ef03eee2d5d9bacc977c6f17e420 468 Gene3D G3DSA:1.20.1250.20 29 244 1.5E-14 T 29-03-2018 AM474_RS09095 b265ef03eee2d5d9bacc977c6f17e420 468 SUPERFAMILY SSF103473 21 460 1.57E-36 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS09095 b265ef03eee2d5d9bacc977c6f17e420 468 TIGRFAM TIGR00886 2A0108: nitrite transporter 38 420 1.7E-119 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 8.1E-125 T 29-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 Gene3D G3DSA:1.10.1040.10 165 298 9.6E-33 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 PIRSF PIRSF000103 1 298 3.5E-83 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 Gene3D G3DSA:3.40.50.720 1 164 1.3E-36 T 29-03-2018 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 3.1E-53 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 SUPERFAMILY SSF48179 164 293 5.55E-41 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 SUPERFAMILY SSF51735 1 162 2.06E-49 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS22355 d335f7287587dcb9a4c56f086c34bbe8 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 5.7E-33 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 Gene3D G3DSA:3.40.50.720 307 590 5.6E-58 T 29-03-2018 AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 Gene3D G3DSA:3.40.50.1820 5 306 7.8E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 SUPERFAMILY SSF51735 321 587 2.1E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 Pfam PF00561 alpha/beta hydrolase fold 37 121 7.2E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 462 490 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 475 494 1.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 496 513 1.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 449 465 1.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 327 344 1.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 401 412 1.0E-20 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 401 412 4.1E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 455 463 4.1E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 475 494 4.1E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 Pfam PF00106 short chain dehydrogenase 326 516 2.3E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05955 f699db44ec5d9f1cdd3a9e5cc3cf1b65 592 SUPERFAMILY SSF53474 8 300 4.92E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Gene3D G3DSA:1.10.287.130 206 272 5.9E-20 T 29-03-2018 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SMART SM00388 209 276 4.4E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Pfam PF11808 Domain of unknown function (DUF3329) 9 94 2.2E-28 T 29-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SUPERFAMILY SSF47384 195 276 8.04E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 430 4.2E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Gene3D G3DSA:3.30.565.10 280 442 2.7E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SMART SM00091 102 170 6.6E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SMART SM00387 321 433 2.4E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 98 429 3.5E-139 T 29-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 275 5.2E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Gene3D G3DSA:3.30.450.20 83 205 8.3E-11 T 29-03-2018 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SUPERFAMILY SSF55785 113 208 1.12E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 Pfam PF00989 PAS fold 102 156 1.6E-5 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS16000 671e218b34b73b907fba3c678c05f821 443 SUPERFAMILY SSF55874 265 429 1.31E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16545 064f1c45b32b7742ef34f1ad90e092e8 160 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 145 6.0E-53 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM474_RS16545 064f1c45b32b7742ef34f1ad90e092e8 160 PIRSF PIRSF016548 1 155 1.6E-68 T 29-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 SMART SM00345 12 71 5.1E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 6.0E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 SMART SM00866 92 231 3.7E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 SUPERFAMILY SSF46785 10 81 8.35E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24635 281907765607f736d3129b74e796232d 238 Gene3D G3DSA:1.10.10.10 1 70 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24635 281907765607f736d3129b74e796232d 238 Gene3D G3DSA:3.40.1410.10 71 237 4.0E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS24635 281907765607f736d3129b74e796232d 238 Pfam PF07702 UTRA domain 92 230 4.1E-37 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 SUPERFAMILY SSF64288 59 235 1.29E-41 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS24635 281907765607f736d3129b74e796232d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS24635 281907765607f736d3129b74e796232d 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.1E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS11180 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50447 208 304 1.56E-29 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 1.1E-33 T 29-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 303 396 6.8E-33 T 29-03-2018 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.678 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:3.40.50.300 75 206 2.3E-27 T 29-03-2018 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:2.40.30.10 209 302 3.9E-32 T 29-03-2018 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 2.6E-57 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF52540 6 222 4.15E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11180 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 1.7E-226 T 29-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 SUPERFAMILY SSF50465 301 396 3.74E-36 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM474_RS11180 dd971f6437737517386859d1c18ee849 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 3.1E-14 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.2E-15 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS11180 dd971f6437737517386859d1c18ee849 397 Gene3D G3DSA:3.40.50.300 2 74 2.8E-11 T 29-03-2018 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 Gene3D G3DSA:3.40.190.10 93 183 5.4E-15 T 29-03-2018 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 Gene3D G3DSA:1.10.10.10 1 86 4.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 SUPERFAMILY SSF46785 4 84 1.57E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 Gene3D G3DSA:3.40.190.10 184 269 1.5E-17 T 29-03-2018 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.5E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 Pfam PF03466 LysR substrate binding domain 94 296 3.5E-28 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS16890 59f7a08f9920edcf4a71079e38629606 302 SUPERFAMILY SSF53850 90 296 1.43E-39 T 29-03-2018 AM474_RS23625 f1c9a9314404985ec5e14f600fefc275 426 Gene3D G3DSA:1.10.443.10 112 305 5.3E-28 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS23625 f1c9a9314404985ec5e14f600fefc275 426 SUPERFAMILY SSF56349 1 303 3.24E-39 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS23625 f1c9a9314404985ec5e14f600fefc275 426 Pfam PF00589 Phage integrase family 145 296 1.5E-23 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS23625 f1c9a9314404985ec5e14f600fefc275 426 Gene3D G3DSA:1.10.150.130 1 111 1.6E-11 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF53850 96 281 1.19E-60 T 29-03-2018 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01842 ACT domain 283 348 9.9E-11 T 29-03-2018 IPR002912 ACT domain AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF00800 Prephenate dehydratase 97 274 1.4E-62 T 29-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:1.20.59.10 1 103 2.9E-36 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 PIRSF PIRSF001500 1 365 8.1E-149 T 29-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 310 317 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF55021 267 362 4.93E-28 T 29-03-2018 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 104 185 3.2E-32 T 29-03-2018 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 248 270 - T 29-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 SMART SM00830 11 95 1.1E-26 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.30.70.260 274 364 3.5E-28 T 29-03-2018 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 SUPERFAMILY SSF48600 6 99 2.75E-19 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Gene3D G3DSA:3.40.190.10 186 261 2.8E-29 T 29-03-2018 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 Pfam PF01817 Chorismate mutase type II 11 93 1.9E-22 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS05060 1152d5e4401b8095769bd361b4ce450a 365 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 85 5.4E-32 T 29-03-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 6.3E-115 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 Gene3D G3DSA:3.30.230.70 2 239 1.5E-64 T 29-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.6E-27 T 29-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 5.1E-10 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 Hamap MF_00564 Ribonuclease PH [rph]. 2 238 49.641 T 29-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF54211 3 182 6.07E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 SUPERFAMILY SSF55666 153 238 7.98E-27 T 29-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM474_RS16140 27586bd646c37c7307d4786e0b8af06e 239 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 29-03-2018 IPR018336 Ribonuclease PH, conserved site AM474_RS13085 66190e447736b2eaf8f7dd21cdb57bd8 241 Gene3D G3DSA:2.160.10.10 5 202 1.7E-35 T 29-03-2018 AM474_RS13085 66190e447736b2eaf8f7dd21cdb57bd8 241 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM474_RS13085 66190e447736b2eaf8f7dd21cdb57bd8 241 SUPERFAMILY SSF51161 40 198 4.57E-35 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS13085 66190e447736b2eaf8f7dd21cdb57bd8 241 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 157 1.3E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 SUPERFAMILY SSF47323 675 872 9.53E-34 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 413 8.8E-68 T 29-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Pfam PF08264 Anticodon-binding domain of tRNA 715 834 1.4E-14 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 631 665 3.9E-7 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 428 584 7.0E-8 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 872 23.393 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 536 558 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 PRINTS PR00985 Leucyl-tRNA synthetase signature 569 579 6.8E-51 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Gene3D G3DSA:3.40.50.620 412 660 8.0E-66 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Gene3D G3DSA:3.40.50.620 1 229 2.5E-74 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 SUPERFAMILY SSF50677 226 424 1.15E-49 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Gene3D G3DSA:1.10.730.10 661 809 2.8E-31 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 SUPERFAMILY SSF52374 426 681 8.96E-151 T 29-03-2018 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 SUPERFAMILY SSF52374 5 226 8.96E-151 T 29-03-2018 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 872 0.0 T 29-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.6E-19 T 29-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS09810 73ea7c49d8088490dc507ba9ba99e178 873 Gene3D G3DSA:3.90.740.10 230 411 4.0E-50 T 29-03-2018 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 SMART SM01134 73 234 7.0E-60 T 29-03-2018 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 Gene3D G3DSA:1.10.10.10 3 64 1.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 SUPERFAMILY SSF100950 77 234 2.51E-31 T 29-03-2018 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 2.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 2.7E-5 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 Gene3D G3DSA:3.40.50.1360 68 238 1.0E-34 T 29-03-2018 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 9.6E-15 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 Pfam PF00455 DeoR C terminal sensor domain 79 233 5.0E-44 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 SUPERFAMILY SSF46785 8 65 2.02E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14990 6b5dc5a42bd26a48b8f6f0db3eff3d8a 257 SMART SM00420 10 62 9.0E-14 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 ProSitePatterns PS00438 Catalase proximal active site signature. 79 95 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 Pfam PF06628 Catalase-related immune-responsive 461 524 3.0E-20 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 SUPERFAMILY SSF56634 21 551 8.24E-223 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 SMART SM01060 43 431 3.9E-275 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 Pfam PF00199 Catalase 44 428 3.6E-180 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 Gene3D G3DSA:2.40.180.10 13 398 3.0E-166 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 360 386 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 56 79 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 159 177 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 328 355 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 140 157 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PRINTS PR00067 Catalase signature 119 137 7.0E-70 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 373 381 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 PIRSF PIRSF038927 1 707 0.0 T 29-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 Pfam PF01965 DJ-1/PfpI family 558 665 1.0E-11 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 Gene3D G3DSA:3.40.50.880 555 705 1.2E-23 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS30065 4762c7da7ee52b490b6ee921036b2e3e 709 SUPERFAMILY SSF52317 555 682 5.24E-20 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:3.30.70.1430 562 668 2.0E-10 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82714 187 267 1.7E-11 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82693 140 184 6.28E-17 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82693 270 325 6.28E-17 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:1.20.1640.10 311 501 2.5E-31 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:1.20.1640.10 821 1025 3.8E-31 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82866 796 1020 3.79E-47 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82714 714 800 2.75E-14 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:3.30.70.1430 42 146 2.2E-28 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Pfam PF00873 AcrB/AcrD/AcrF family 7 1013 9.2E-172 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:3.30.70.1320 228 310 8.1E-16 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 Gene3D G3DSA:3.30.2090.10 711 801 3.7E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82693 42 136 1.83E-19 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82866 301 490 2.22E-36 T 29-03-2018 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 PRINTS PR00702 Acriflavin resistance protein family signature 547 564 3.0E-23 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS07740 c1df135102e8caa5c3dffe27eb18ff41 1025 SUPERFAMILY SSF82693 566 659 7.59E-5 T 29-03-2018 AM474_RS13485 eb2932a73d93c1e8764a71bd7fd34f1b 716 Gene3D G3DSA:3.40.50.1820 23 390 5.0E-13 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13485 eb2932a73d93c1e8764a71bd7fd34f1b 716 Pfam PF11678 Protein of unknown function (DUF3274) 386 685 4.8E-109 T 29-03-2018 IPR021692 Protein of unknown function DUF3274 AM474_RS13485 eb2932a73d93c1e8764a71bd7fd34f1b 716 SUPERFAMILY SSF53474 176 278 7.39E-12 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 315 8.9E-81 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:3.40.50.620 1 218 2.1E-65 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:1.10.240.10 219 309 1.8E-27 T 29-03-2018 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.2E-26 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.2E-26 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.2E-26 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.2E-26 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 Gene3D G3DSA:3.10.290.10 310 399 4.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 396 48.202 T 29-03-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 396 1.5E-119 T 29-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 SUPERFAMILY SSF55174 320 396 9.68E-14 T 29-03-2018 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 SUPERFAMILY SSF52374 4 310 2.43E-99 T 29-03-2018 AM474_RS11305 9f5777366d839fc0d87c559621a32a93 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS24270 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13861 FlgD Tudor-like domain 97 233 1.3E-17 T 29-03-2018 IPR025963 FlgD Tudor-like domain AM474_RS24270 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF13860 FlgD Ig-like domain 119 189 3.9E-22 T 29-03-2018 IPR025965 FlgD Ig-like domain AM474_RS24270 e190db32bf9778a9dfa861120c4b6437 237 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 89 7.7E-25 T 29-03-2018 IPR005648 Flagellar hook capping protein AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF46785 1 111 8.77E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF03466 LysR substrate binding domain 91 285 3.2E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:3.40.190.10 88 172 2.1E-12 T 29-03-2018 AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:3.40.190.10 173 256 3.9E-13 T 29-03-2018 AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 Gene3D G3DSA:1.10.10.10 1 87 3.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 SUPERFAMILY SSF53850 91 288 5.12E-37 T 29-03-2018 AM474_RS07915 5abcf013a0f47f78152817bc7a9ab234 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03290 b31b0365d98c5cd48a5616264d14906f 160 SUPERFAMILY SSF55781 19 153 4.17E-37 T 29-03-2018 IPR029016 GAF domain-like AM474_RS03290 b31b0365d98c5cd48a5616264d14906f 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 97 114 - T 29-03-2018 IPR000614 Free Met sulfoxide reductase conserved site AM474_RS03290 b31b0365d98c5cd48a5616264d14906f 160 Gene3D G3DSA:3.30.450.40 7 154 4.7E-21 T 29-03-2018 IPR029016 GAF domain-like AM474_RS03290 b31b0365d98c5cd48a5616264d14906f 160 Pfam PF13185 GAF domain 42 151 2.8E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 Gene3D G3DSA:3.50.50.60 184 318 2.0E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 294 2.6E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 Gene3D G3DSA:3.50.50.60 63 145 2.7E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 SUPERFAMILY SSF51905 2 315 9.33E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 Gene3D G3DSA:3.90.180.10 146 183 0.023 T 29-03-2018 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 1.1E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.1E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.1E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-8 T 29-03-2018 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.2E-8 T 29-03-2018 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.2E-8 T 29-03-2018 AM474_RS26560 f9ec38b06358bc8c15b69ddf253dd49a 412 Gene3D G3DSA:3.50.50.60 3 62 1.8E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 Gene3D G3DSA:3.40.1050.10 1 211 7.7E-70 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 SUPERFAMILY SSF53056 2 203 6.54E-67 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 SMART SM00947 27 193 2.4E-68 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 Pfam PF00484 Carbonic anhydrase 34 189 2.1E-51 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS29580 b77be9886f7342b83e6b6dbcd8e2564d 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS28065 4b572ebd887d4e43507177d405708550 327 Gene3D G3DSA:3.30.470.20 144 286 3.0E-17 T 29-03-2018 AM474_RS28065 4b572ebd887d4e43507177d405708550 327 SUPERFAMILY SSF56059 40 201 5.5E-19 T 29-03-2018 AM474_RS28065 4b572ebd887d4e43507177d405708550 327 SUPERFAMILY SSF56059 231 279 5.5E-19 T 29-03-2018 AM474_RS28065 4b572ebd887d4e43507177d405708550 327 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 4 323 6.8E-170 T 29-03-2018 IPR011758 Alpha-L-glutamate ligase-related protein AM474_RS28065 4b572ebd887d4e43507177d405708550 327 Gene3D G3DSA:3.30.1490.20 40 143 6.6E-7 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS28065 4b572ebd887d4e43507177d405708550 327 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 293 3.3E-103 T 29-03-2018 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Pfam PF09327 Domain of unknown function (DUF1983) 1066 1144 5.2E-22 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Pfam PF13550 Putative phage tail protein 339 505 6.3E-26 T 29-03-2018 IPR032876 Tip attachment protein J AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 SUPERFAMILY SSF49265 622 710 1.08E-5 T 29-03-2018 IPR003961 Fibronectin type III GO:0005515 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:2.60.40.10 620 822 1.6E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:2.10.10.20 861 905 8.9E-4 T 29-03-2018 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:3.10.450.50 948 1021 0.16 T 29-03-2018 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:2.60.40.10 101 595 0.1 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:1.20.5.730 1022 1093 0.034 T 29-03-2018 AM474_RS11420 466442839adb0bfdb94540f41693f0c6 1217 Gene3D G3DSA:1.20.5.170 906 937 0.39 T 29-03-2018 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF01895 PhoU domain 338 419 5.5E-7 T 29-03-2018 IPR026022 PhoU domain AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 Gene3D G3DSA:1.20.58.220 439 536 4.7E-10 T 29-03-2018 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 305 1.9E-63 T 29-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF02690 Na+/Pi-cotransporter 142 238 8.2E-11 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 Pfam PF02690 Na+/Pi-cotransporter 16 150 1.1E-33 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 SUPERFAMILY SSF109755 328 527 2.62E-25 T 29-03-2018 AM474_RS19105 a6c87a04bd6f0f4431a8d5373ebc527c 555 Gene3D G3DSA:1.20.58.220 329 421 2.2E-12 T 29-03-2018 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:1.10.10.60 217 267 5.6E-7 T 29-03-2018 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF51182 32 186 9.78E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:2.60.120.10 16 109 9.6E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 Gene3D G3DSA:1.10.10.60 113 216 6.0E-11 T 29-03-2018 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 SMART SM00342 177 259 4.6E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 Pfam PF12833 Helix-turn-helix domain 183 260 2.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 SUPERFAMILY SSF46689 216 261 1.57E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25145 fcd87624cecd2fde25c72e0167dc1e2f 268 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PIRSF PIRSF000094 1 263 1.4E-109 T 29-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 Gene3D G3DSA:3.40.50.720 3 261 7.9E-42 T 29-03-2018 AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 1.6E-83 T 29-03-2018 AM474_RS28310 f7666ac805e1eceeafbb1cc1791bedc5 265 SUPERFAMILY SSF51735 6 255 1.36E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 SUPERFAMILY SSF46785 6 138 1.03E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 Pfam PF01047 MarR family 35 92 9.1E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 3.3E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 3.3E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 3.3E-8 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 SMART SM00347 28 128 8.8E-31 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS12580 53798a33c4e62ab9b5413a6d973770e3 147 Gene3D G3DSA:1.10.10.10 9 142 4.0E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.10.20.70 8 119 1.2E-19 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF54368 17 119 3.14E-17 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 SMART SM01230 120 376 1.2E-93 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 SUPERFAMILY SSF55931 122 456 1.18E-99 T 29-03-2018 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 4.5E-107 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS29510 3deefc223ecd179d97ce46f003f9ed8d 458 Gene3D G3DSA:3.30.590.10 120 458 6.1E-96 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS27365 18bd32c94b7832943fa7cede502cb9bc 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 47.144 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM474_RS27365 18bd32c94b7832943fa7cede502cb9bc 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 9.7E-129 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM474_RS27365 18bd32c94b7832943fa7cede502cb9bc 302 Gene3D G3DSA:3.40.710.10 1 302 1.2E-122 T 29-03-2018 AM474_RS27365 18bd32c94b7832943fa7cede502cb9bc 302 Pfam PF04960 Glutaminase 19 302 4.3E-111 T 29-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 AM474_RS27365 18bd32c94b7832943fa7cede502cb9bc 302 SUPERFAMILY SSF56601 1 302 4.38E-109 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 Gene3D G3DSA:3.30.470.20 10 205 0.039 T 29-03-2018 AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 SUPERFAMILY SSF56059 15 210 1.94E-63 T 29-03-2018 AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 SUPERFAMILY SSF56059 315 461 1.94E-63 T 29-03-2018 AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 PIRSF PIRSF005522 1 470 3.2E-231 T 29-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 446 2.2E-165 T 29-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 AM474_RS27875 fe12709c82cf7e05351be7dc48a4b062 470 Gene3D G3DSA:3.30.470.20 335 464 1.4E-5 T 29-03-2018 AM474_RS07655 5f4b803128fd42f381bec3ef4583d063 402 Gene3D G3DSA:3.90.1150.10 289 402 3.6E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS07655 5f4b803128fd42f381bec3ef4583d063 402 Pfam PF00155 Aminotransferase class I and II 32 395 1.1E-43 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS07655 5f4b803128fd42f381bec3ef4583d063 402 Gene3D G3DSA:3.40.640.10 40 288 8.4E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS07655 5f4b803128fd42f381bec3ef4583d063 402 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 398 6.7E-201 T 29-03-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 AM474_RS07655 5f4b803128fd42f381bec3ef4583d063 402 SUPERFAMILY SSF53383 2 400 5.09E-88 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS05360 432bb227c9f96a93c5cfd063e14710b9 297 SUPERFAMILY SSF103481 181 281 8.11E-18 T 29-03-2018 AM474_RS05360 432bb227c9f96a93c5cfd063e14710b9 297 Pfam PF00892 EamA-like transporter family 12 135 2.8E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS05360 432bb227c9f96a93c5cfd063e14710b9 297 Pfam PF00892 EamA-like transporter family 147 277 3.0E-21 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS05360 432bb227c9f96a93c5cfd063e14710b9 297 SUPERFAMILY SSF103481 38 136 6.8E-9 T 29-03-2018 AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 Gene3D G3DSA:1.10.287.210 223 333 1.8E-25 T 29-03-2018 AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 SUPERFAMILY SSF160355 221 332 2.09E-14 T 29-03-2018 AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 Pfam PF02706 Chain length determinant protein 13 72 1.2E-12 T 29-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 Gene3D G3DSA:3.30.1890.10 48 222 2.4E-28 T 29-03-2018 AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 415 5.2E-9 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain AM474_RS23400 e61a367cd9db5007dd4c1d433771531b 442 SUPERFAMILY SSF160355 72 220 3.53E-11 T 29-03-2018 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 SUPERFAMILY SSF52540 194 436 3.0E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Gene3D G3DSA:1.10.8.60 368 439 2.7E-17 T 29-03-2018 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Gene3D G3DSA:3.40.50.300 191 367 3.9E-31 T 29-03-2018 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 SUPERFAMILY SSF55781 27 174 4.36E-8 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 SMART SM00382 215 358 1.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 219 232 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 477 497 1.3E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 477 1.3E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Gene3D G3DSA:1.10.10.60 440 500 3.3E-16 T 29-03-2018 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 SUPERFAMILY SSF46689 409 496 7.17E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Pfam PF02954 Bacterial regulatory protein, Fis family 454 493 7.6E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 Gene3D G3DSA:3.30.450.40 9 178 1.5E-13 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27530 ba49106274895c175af27e5c7b90c020 503 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS04575 24dff374206853f2fa5879da287fc015 340 SMART SM00327 89 289 7.4E-24 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04575 24dff374206853f2fa5879da287fc015 340 Gene3D G3DSA:3.40.50.410 86 305 7.0E-43 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04575 24dff374206853f2fa5879da287fc015 340 SUPERFAMILY SSF53300 86 266 9.79E-39 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04575 24dff374206853f2fa5879da287fc015 340 Pfam PF00092 von Willebrand factor type A domain 91 282 7.9E-32 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 PIRSF PIRSF000105 2 300 5.4E-82 T 29-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 SUPERFAMILY SSF48179 189 291 2.38E-32 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 SUPERFAMILY SSF51735 6 189 4.98E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 Gene3D G3DSA:1.10.1040.10 190 290 3.5E-31 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 Gene3D G3DSA:3.40.50.720 2 189 5.5E-54 T 29-03-2018 AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 4.6E-58 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS00310 2a1a4899ac83fc133db00d3299069861 301 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 192 285 3.3E-28 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS11630 2cf80dfb8fe4cc20c4e2ead50cea199e 353 Gene3D G3DSA:3.40.50.1820 47 349 2.5E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11630 2cf80dfb8fe4cc20c4e2ead50cea199e 353 Pfam PF12048 Protein of unknown function (DUF3530) 13 341 4.5E-106 T 29-03-2018 IPR022529 Protein of unknown function DUF3530 AM474_RS11630 2cf80dfb8fe4cc20c4e2ead50cea199e 353 SUPERFAMILY SSF53474 72 127 2.82E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11630 2cf80dfb8fe4cc20c4e2ead50cea199e 353 SUPERFAMILY SSF53474 207 319 2.82E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27805 5b37190bd7091542cd44af1ab1d005e5 432 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 3 415 4.6E-78 T 29-03-2018 IPR012843 Type III secretion system YscD/HrpQ AM474_RS27805 5b37190bd7091542cd44af1ab1d005e5 432 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 6 98 2.8E-20 T 29-03-2018 IPR032030 YscD, cytoplasmic domain AM474_RS27805 5b37190bd7091542cd44af1ab1d005e5 432 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 164 415 6.1E-95 T 29-03-2018 IPR032034 Yop protein translocation protein D, periplasmic domain AM474_RS27805 5b37190bd7091542cd44af1ab1d005e5 432 Gene3D G3DSA:2.60.200.20 1 65 1.1E-5 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 1.4E-15 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 1.4E-15 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 481 1.4E-15 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 400 1.4E-15 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 SUPERFAMILY SSF51905 562 657 1.46E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 SUPERFAMILY SSF51905 466 524 1.46E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 Gene3D G3DSA:3.20.20.70 6 373 3.3E-112 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 SUPERFAMILY SSF51395 4 366 9.3E-114 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 Gene3D G3DSA:3.40.50.720 378 484 1.0E-22 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 626 640 2.6E-6 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 380 402 2.6E-6 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 332 6.5E-87 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 641 2.9E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 SUPERFAMILY SSF51971 337 526 9.42E-43 T 29-03-2018 AM474_RS04680 0b0cec4a7f56e59da8b4cb6829850dd4 679 Gene3D G3DSA:3.50.50.60 485 632 1.4E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 33.615 T 29-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 Gene3D G3DSA:3.30.70.260 142 200 7.5E-24 T 29-03-2018 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 SUPERFAMILY SSF75445 131 202 7.98E-24 T 29-03-2018 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 9.8E-65 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 SUPERFAMILY SSF100950 1 150 2.14E-42 T 29-03-2018 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 Gene3D G3DSA:3.40.50.1360 1 141 1.3E-39 T 29-03-2018 AM474_RS13075 305debf3c488ab8421521cd6d6020e98 223 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 1.6E-57 T 29-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 PIRSF PIRSF039102 59 318 1.4E-82 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 PIRSF PIRSF039102 17 65 9.3E-8 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.30.470.20 181 318 1.4E-38 T 29-03-2018 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.40.50.20 12 93 2.3E-27 T 29-03-2018 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 315 35.054 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 313 4.8E-110 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 SUPERFAMILY SSF56059 113 312 5.48E-59 T 29-03-2018 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 SUPERFAMILY SSF52440 20 112 5.08E-30 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Pfam PF01820 D-ala D-ala ligase N-terminus 20 102 3.1E-18 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Gene3D G3DSA:3.30.1490.20 94 180 8.0E-31 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 Pfam PF07478 D-ala D-ala ligase C-terminus 120 311 2.4E-56 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21340 87a7f4bab32128f75d0cb30f439bda41 319 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 Pfam PF01019 Gamma-glutamyltranspeptidase 38 532 5.2E-158 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 SUPERFAMILY SSF56235 7 535 1.52E-173 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 114 132 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 237 253 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 427 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 45 70 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 132 151 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS13950 a3b0a34ad32c0f6eaec8d55ab14a3d3f 538 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 381 399 9.5E-42 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 29-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 PIRSF PIRSF002191 1 116 5.6E-49 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 SUPERFAMILY SSF50104 2 114 2.61E-45 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 Pfam PF01245 Ribosomal protein L19 5 114 2.3E-49 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.6E-41 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 3.7E-50 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08075 f4d4becb78b8492e132fdd007a6696e9 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.92 T 29-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS31465 e0456e25d5ff6511e143b106696a5a9c 178 Gene3D G3DSA:2.20.110.10 42 155 1.2E-17 T 29-03-2018 AM474_RS31465 e0456e25d5ff6511e143b106696a5a9c 178 SUPERFAMILY SSF82185 12 134 3.4E-26 T 29-03-2018 AM474_RS31465 e0456e25d5ff6511e143b106696a5a9c 178 Pfam PF07661 MORN repeat variant 96 117 8.7E-4 T 29-03-2018 IPR011652 MORN variant AM474_RS31465 e0456e25d5ff6511e143b106696a5a9c 178 Pfam PF07661 MORN repeat variant 48 65 0.22 T 29-03-2018 IPR011652 MORN variant AM474_RS31465 e0456e25d5ff6511e143b106696a5a9c 178 Pfam PF07661 MORN repeat variant 120 141 0.23 T 29-03-2018 IPR011652 MORN variant AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 SMART SM00345 25 84 5.8E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 SUPERFAMILY SSF46785 16 87 1.13E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 Pfam PF07702 UTRA domain 106 240 4.3E-34 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.9E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 Gene3D G3DSA:1.10.10.10 9 84 6.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 SUPERFAMILY SSF64288 72 247 4.4E-44 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 Gene3D G3DSA:3.40.1410.10 85 247 4.9E-40 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 SMART SM00866 104 240 2.1E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS08155 ce70cf95c596ce5c328024196225289d 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 84 9.4E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 207 8.4E-105 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 29-03-2018 IPR018215 ClpP, Ser active site AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 SUPERFAMILY SSF52096 27 210 6.84E-76 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 2.0E-52 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 2.0E-52 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 2.0E-52 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 2.0E-52 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 2.0E-52 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 Gene3D G3DSA:3.90.226.10 18 210 1.7E-45 T 29-03-2018 AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 Pfam PF00574 Clp protease 29 208 1.3E-88 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 29-03-2018 IPR033135 ClpP, histidine active site AM474_RS28280 07e51ed7ba21ae35f08f734999ec04a9 213 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 43.732 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS24180 6487f059e85cf92c0bbe26a4de13d66a 173 Pfam PF00583 Acetyltransferase (GNAT) family 14 139 2.9E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS24180 6487f059e85cf92c0bbe26a4de13d66a 173 Gene3D G3DSA:3.40.630.30 2 171 2.5E-28 T 29-03-2018 AM474_RS24180 6487f059e85cf92c0bbe26a4de13d66a 173 SUPERFAMILY SSF55729 3 162 2.4E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 489 1.2E-40 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SUPERFAMILY SSF55785 87 199 3.32E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 209 327 1.7E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 197 1.3E-11 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SUPERFAMILY SSF141868 506 749 2.88E-88 T 29-03-2018 IPR001633 EAL domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SUPERFAMILY SSF55073 336 492 1.18E-48 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00091 206 272 3.4E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00091 81 149 6.1E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Pfam PF00563 EAL domain 507 742 7.0E-76 T 29-03-2018 IPR001633 EAL domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SUPERFAMILY SSF55785 211 318 2.09E-29 T 29-03-2018 IPR000014 PAS domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Pfam PF08447 PAS fold 104 192 1.4E-21 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00267 320 491 1.5E-61 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00086 156 198 8.7E-10 T 29-03-2018 IPR001610 PAC motif AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00086 278 320 3.8E-5 T 29-03-2018 IPR001610 PAC motif AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Gene3D G3DSA:3.20.20.450 498 751 1.7E-101 T 29-03-2018 IPR001633 EAL domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Pfam PF00990 Diguanylate cyclase, GGDEF domain 331 486 3.7E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Gene3D G3DSA:3.30.450.20 206 326 2.2E-27 T 29-03-2018 AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 SMART SM00052 501 747 3.8E-121 T 29-03-2018 IPR001633 EAL domain AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Gene3D G3DSA:3.30.70.270 327 497 1.6E-58 T 29-03-2018 AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Gene3D G3DSA:3.30.450.20 57 205 8.9E-32 T 29-03-2018 AM474_RS13325 73e445aabaef2d0b03dbb5a9b33be534 760 Pfam PF00989 PAS fold 209 316 1.3E-15 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 SUPERFAMILY SSF46785 3 87 6.99E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 Gene3D G3DSA:3.40.190.10 89 175 1.3E-14 T 29-03-2018 AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 Gene3D G3DSA:1.10.10.10 2 84 3.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 SUPERFAMILY SSF53850 91 295 2.35E-40 T 29-03-2018 AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 Gene3D G3DSA:3.40.190.10 176 263 2.4E-25 T 29-03-2018 AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 Pfam PF03466 LysR substrate binding domain 88 292 4.2E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24205 4abaf59594115ca7f730db2c37f752a7 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56519 49 216 2.09E-37 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.90.1310.10 22 217 9.2E-37 T 29-03-2018 AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 SUPERFAMILY SSF56601 217 545 1.31E-87 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF00905 Penicillin binding protein transpeptidase domain 242 538 5.6E-81 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 Gene3D G3DSA:3.40.710.10 218 564 5.1E-81 T 29-03-2018 AM474_RS30975 02bc9adbb8dcd005d60c73ad26be226f 565 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 201 1.0E-11 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 SUPERFAMILY SSF53850 90 290 8.91E-41 T 29-03-2018 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 SUPERFAMILY SSF46785 1 86 3.76E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.1E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 Gene3D G3DSA:1.10.10.10 1 91 7.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 Pfam PF03466 LysR substrate binding domain 87 290 5.4E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 Gene3D G3DSA:3.40.190.10 174 263 6.7E-22 T 29-03-2018 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 Gene3D G3DSA:3.40.190.10 92 173 1.8E-19 T 29-03-2018 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06565 40aac18d72c2f79b14b99ed7d539a336 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07415 8c3b2b9d59dc54166b47e1f8a2092265 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-23 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM474_RS07415 8c3b2b9d59dc54166b47e1f8a2092265 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 3.5E-31 T 29-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor AM474_RS15515 544856bffa27a739a37b171212147b24 375 Pfam PF13439 Glycosyltransferase Family 4 16 171 2.2E-8 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS15515 544856bffa27a739a37b171212147b24 375 SUPERFAMILY SSF53756 11 373 1.21E-65 T 29-03-2018 AM474_RS15515 544856bffa27a739a37b171212147b24 375 Gene3D G3DSA:3.40.50.2000 156 366 3.7E-38 T 29-03-2018 AM474_RS15515 544856bffa27a739a37b171212147b24 375 Pfam PF00534 Glycosyl transferases group 1 198 335 5.3E-26 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 Pfam PF00593 TonB dependent receptor 284 740 8.5E-31 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 Gene3D G3DSA:2.170.130.10 28 151 7.0E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 Gene3D G3DSA:2.40.170.20 152 742 7.8E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 49 742 2.0E-91 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 SUPERFAMILY SSF56935 477 742 1.25E-93 T 29-03-2018 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 SUPERFAMILY SSF56935 35 446 1.25E-93 T 29-03-2018 AM474_RS19915 ffd8e06575464f3187aacbc707b90b35 742 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 150 2.2E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 Gene3D G3DSA:3.30.950.10 120 247 1.1E-28 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 4.8E-48 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 Gene3D G3DSA:3.40.1010.10 1 119 6.2E-33 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 247 2.8E-98 T 29-03-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 AM474_RS03940 dc87c866b6aad249624bbc809c463d30 250 SUPERFAMILY SSF53790 2 229 7.07E-69 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 SUPERFAMILY SSF55073 167 322 4.71E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 321 1.4E-43 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 SUPERFAMILY SSF55785 39 153 1.21E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 SMART SM00086 108 151 4.3E-5 T 29-03-2018 IPR001610 PAC motif AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 Gene3D G3DSA:3.30.70.270 166 323 2.9E-55 T 29-03-2018 AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 29 158 5.7E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 SMART SM00091 33 102 0.0022 T 29-03-2018 IPR000014 PAS domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 SMART SM00267 151 323 6.4E-52 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 Gene3D G3DSA:3.30.450.20 16 165 2.7E-28 T 29-03-2018 AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 318 2.5E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13295 77445a1d61f3110c3f64eb3e197dff5e 323 Pfam PF08447 PAS fold 57 145 3.3E-18 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS30790 c5e5972d97fbd0c690a9030053ce9c17 395 Gene3D G3DSA:3.40.50.2000 179 368 3.0E-23 T 29-03-2018 AM474_RS30790 c5e5972d97fbd0c690a9030053ce9c17 395 Pfam PF00534 Glycosyl transferases group 1 192 365 1.4E-14 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS30790 c5e5972d97fbd0c690a9030053ce9c17 395 SUPERFAMILY SSF53756 8 389 6.8E-35 T 29-03-2018 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 SUPERFAMILY SSF52283 5 103 1.34E-15 T 29-03-2018 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 SUPERFAMILY SSF51735 91 258 3.88E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Pfam PF11890 Domain of unknown function (DUF3410) 290 376 2.6E-22 T 29-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 33 277 9.8E-15 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Gene3D G3DSA:3.40.50.720 105 257 6.5E-38 T 29-03-2018 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 256 2.4E-35 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Gene3D G3DSA:3.40.50.720 1 104 2.8E-20 T 29-03-2018 AM474_RS25985 248b35ae0fa1147d181793613af9f524 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 363 44.961 T 29-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 AM474_RS18765 8d1494bd86ddfbba7ca449e440202a9d 438 SUPERFAMILY SSF103473 8 372 1.57E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS18765 8d1494bd86ddfbba7ca449e440202a9d 438 Pfam PF00083 Sugar (and other) transporter 39 158 9.6E-8 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS18765 8d1494bd86ddfbba7ca449e440202a9d 438 Gene3D G3DSA:1.20.1250.20 4 192 9.7E-13 T 29-03-2018 AM474_RS18765 8d1494bd86ddfbba7ca449e440202a9d 438 Gene3D G3DSA:1.20.1250.20 197 385 2.4E-21 T 29-03-2018 AM474_RS18765 8d1494bd86ddfbba7ca449e440202a9d 438 Pfam PF07690 Major Facilitator Superfamily 206 386 1.4E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 Gene3D G3DSA:1.10.10.10 7 151 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 SMART SM00347 32 132 5.5E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 SUPERFAMILY SSF46785 14 145 9.73E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 Pfam PF01047 MarR family 39 96 1.6E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 6.4E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 6.4E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 6.4E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS17060 897c9d3633b9f27494c0f24081323bf9 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 6.4E-17 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS24995 0669e102f71f0622071fafedfe50cb7e 135 SUPERFAMILY SSF82784 9 133 2.62E-36 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS24995 0669e102f71f0622071fafedfe50cb7e 135 Pfam PF02566 OsmC-like protein 36 130 1.1E-20 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS24995 0669e102f71f0622071fafedfe50cb7e 135 Gene3D G3DSA:3.30.300.20 1 134 1.6E-33 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 956 25.744 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 SUPERFAMILY SSF53383 929 951 3.99E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 SUPERFAMILY SSF53383 473 887 3.99E-96 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 950 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Gene3D G3DSA:3.40.640.10 532 772 5.4E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Pfam PF02347 Glycine cleavage system P-protein 18 441 1.3E-173 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Gene3D G3DSA:3.90.1150.10 773 905 2.2E-40 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Gene3D G3DSA:3.90.1150.10 343 444 1.9E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Pfam PF01212 Beta-eliminating lyase 546 711 8.2E-5 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 Gene3D G3DSA:3.40.640.10 98 342 1.9E-31 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS16765 e044ca9b149f5ed8a290246fd5eecf08 958 SUPERFAMILY SSF53383 19 442 4.13E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 3.2E-32 T 29-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 Gene3D G3DSA:1.20.1300.10 1 124 1.9E-29 T 29-03-2018 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 PIRSF PIRSF000178 1 124 1.9E-31 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 4.0E-42 T 29-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 29-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27080 3e5a9a9ad8161ca6dc3e70411bd4cffd 124 SUPERFAMILY SSF81343 2 124 6.05E-35 T 29-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 194 1.4E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 Gene3D G3DSA:1.20.1050.10 99 207 1.3E-29 T 29-03-2018 AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 SUPERFAMILY SSF52833 3 84 8.08E-24 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 SUPERFAMILY SSF47616 75 200 7.64E-33 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 Gene3D G3DSA:3.40.30.10 1 98 2.2E-31 T 29-03-2018 AM474_RS24870 5e6a55f5571f28d92292c170e2f2a3e0 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 78 2.1E-16 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS04980 7b9d53b4af6fe1490d37b3a0eded9679 400 Gene3D G3DSA:3.40.50.2000 210 364 2.6E-12 T 29-03-2018 AM474_RS04980 7b9d53b4af6fe1490d37b3a0eded9679 400 Pfam PF13579 Glycosyl transferase 4-like domain 21 191 1.5E-6 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS04980 7b9d53b4af6fe1490d37b3a0eded9679 400 Pfam PF13692 Glycosyl transferases group 1 219 358 1.1E-9 T 29-03-2018 AM474_RS04980 7b9d53b4af6fe1490d37b3a0eded9679 400 Gene3D G3DSA:3.40.50.2000 35 208 8.5E-4 T 29-03-2018 AM474_RS04980 7b9d53b4af6fe1490d37b3a0eded9679 400 SUPERFAMILY SSF53756 62 394 6.28E-23 T 29-03-2018 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 29-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 6.2E-134 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.5E-95 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 SUPERFAMILY SSF81442 43 559 3.53E-177 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 Gene3D G3DSA:1.20.210.10 43 561 1.7E-183 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 Gene3D G3DSA:1.10.287.70 576 640 5.8E-16 T 29-03-2018 AM474_RS25660 0c882b8b57b5928674bb3509b15b0d2f 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS22410 3b27edbaaed380e5c4f11a891bb6ee98 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 57 324 2.2E-24 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM474_RS22410 3b27edbaaed380e5c4f11a891bb6ee98 327 PIRSF PIRSF017082 1 327 3.4E-81 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM474_RS22410 3b27edbaaed380e5c4f11a891bb6ee98 327 SUPERFAMILY SSF53850 61 277 2.76E-11 T 29-03-2018 AM474_RS22410 3b27edbaaed380e5c4f11a891bb6ee98 327 Gene3D G3DSA:3.40.190.10 122 241 1.4E-14 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55681 109 290 1.33E-102 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55681 422 585 1.33E-102 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 33.862 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 4.7E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 4.7E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 4.7E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 4.7E-27 T 29-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 1.9E-243 T 29-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:3.30.930.10 134 375 2.8E-51 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:3.30.930.10 376 587 8.7E-51 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF55261 292 422 1.26E-44 T 29-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Gene3D G3DSA:2.40.50.140 1 109 9.8E-27 T 29-03-2018 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 1.8E-108 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF02938 GAD domain 310 409 1.3E-31 T 29-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 SUPERFAMILY SSF50249 2 106 7.43E-34 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS23550 ca848f453d01c7910a4a37195bcc4765 591 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 1.8E-16 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM474_RS10690 be295faa1302faba6a2ee674cc261519 108 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 106 9.0E-16 T 29-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like AM474_RS10690 be295faa1302faba6a2ee674cc261519 108 Gene3D G3DSA:3.10.490.10 1 108 8.6E-20 T 29-03-2018 AM474_RS10690 be295faa1302faba6a2ee674cc261519 108 SUPERFAMILY SSF110857 1 106 3.92E-21 T 29-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 Gene3D G3DSA:3.40.190.10 115 207 9.5E-18 T 29-03-2018 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 SUPERFAMILY SSF53850 1 206 1.87E-63 T 29-03-2018 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 56.773 T 29-03-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 Pfam PF01634 ATP phosphoribosyltransferase 51 202 1.5E-45 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 6.1E-53 T 29-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 29-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AM474_RS21140 4cb399af2ea13d89b839dbb2b812cb0c 211 Gene3D G3DSA:3.40.190.10 1 114 2.5E-35 T 29-03-2018 AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 SUPERFAMILY SSF103088 78 207 1.44E-35 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 Pfam PF00691 OmpA family 105 201 5.2E-24 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 Gene3D G3DSA:3.30.1330.60 76 210 3.9E-41 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 136 151 2.6E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 151 167 2.6E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS24065 8347a15af8bb9bcc94ca00029d781475 210 PRINTS PR01021 OMPA domain signature 105 127 2.6E-17 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00027 Cyclic nucleotide-binding domain 22 114 4.9E-22 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 93 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 Pfam PF00325 Bacterial regulatory proteins, crp family 170 200 3.0E-14 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 201 3.3E-9 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 170 186 3.3E-9 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:1.10.10.10 149 214 9.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00042 Crp-type HTH domain signature. 172 195 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 Gene3D G3DSA:2.60.120.10 8 148 5.3E-31 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 31 47 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF46785 143 211 6.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00419 164 212 6.6E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 SMART SM00100 3 126 2.5E-27 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS11385 d913cf1a8f4296daab521d724340c0d0 214 SUPERFAMILY SSF51206 12 141 1.22E-34 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS12255 3c6f77628b4c1e51ee87518ee7e67b78 324 Gene3D G3DSA:3.30.200.20 3 104 1.6E-17 T 29-03-2018 AM474_RS12255 3c6f77628b4c1e51ee87518ee7e67b78 324 Hamap MF_01497 Stress response kinase A [srkA]. 1 317 48.373 T 29-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 AM474_RS12255 3c6f77628b4c1e51ee87518ee7e67b78 324 Gene3D G3DSA:3.90.1200.10 108 320 4.3E-22 T 29-03-2018 AM474_RS12255 3c6f77628b4c1e51ee87518ee7e67b78 324 SUPERFAMILY SSF56112 1 322 1.25E-86 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS12255 3c6f77628b4c1e51ee87518ee7e67b78 324 Pfam PF01636 Phosphotransferase enzyme family 32 260 2.3E-38 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Gene3D G3DSA:2.30.40.10 19 141 3.7E-22 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Pfam PF07969 Amidohydrolase family 71 576 6.1E-75 T 29-03-2018 IPR013108 Amidohydrolase 3 AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51556 82 146 1.36E-30 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51556 226 536 1.36E-30 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51338 22 83 1.07E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 SUPERFAMILY SSF51338 535 577 1.07E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS31845 ab03cacd5f3d8a6caaedc1b181d4f4fd 580 Gene3D G3DSA:3.20.20.140 210 533 2.2E-46 T 29-03-2018 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 Gene3D G3DSA:1.10.10.60 219 265 4.4E-5 T 29-03-2018 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 Gene3D G3DSA:1.10.10.60 161 218 1.9E-12 T 29-03-2018 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 SUPERFAMILY SSF46689 217 263 2.46E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 Pfam PF12833 Helix-turn-helix domain 186 263 8.7E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 SUPERFAMILY SSF51182 12 189 7.56E-18 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 Gene3D G3DSA:2.60.120.10 5 111 2.2E-6 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 SMART SM00342 180 262 9.7E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS13955 9264dfbb8d6448a4b09517465d20538b 265 Pfam PF02311 AraC-like ligand binding domain 37 130 3.4E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS09530 c2f3fb7b4c7bb88d2148c24877fc460c 364 Pfam PF00296 Luciferase-like monooxygenase 9 328 3.5E-78 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS09530 c2f3fb7b4c7bb88d2148c24877fc460c 364 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 8 356 1.6E-193 T 29-03-2018 IPR024014 Dimethyl sulphone monooxygenase SfnG AM474_RS09530 c2f3fb7b4c7bb88d2148c24877fc460c 364 SUPERFAMILY SSF51679 5 355 1.14E-94 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS09530 c2f3fb7b4c7bb88d2148c24877fc460c 364 Gene3D G3DSA:3.20.20.30 4 361 1.0E-82 T 29-03-2018 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 243 2.3E-97 T 29-03-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 245 34.098 T 29-03-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 Gene3D G3DSA:3.40.50.1580 2 245 1.9E-43 T 29-03-2018 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 SUPERFAMILY SSF53167 4 243 4.03E-78 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 Pfam PF01048 Phosphorylase superfamily 4 243 1.4E-42 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM474_RS04230 ae4a6f095aa5cd74db630046e2ebf75d 245 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 50 90 - T 29-03-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 Gene3D G3DSA:3.40.30.10 1 99 6.7E-12 T 29-03-2018 AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 SUPERFAMILY SSF52833 4 91 1.51E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 Gene3D G3DSA:1.20.1050.10 100 218 1.2E-18 T 29-03-2018 AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 150 214 3.9E-8 T 29-03-2018 AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 SUPERFAMILY SSF47616 139 217 1.08E-13 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS08980 6657ee5dc9e59d4525d1490d9cbb12ef 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 1.6E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS31370 552ef0b35ce05afd187cf4713dc29098 381 Pfam PF00296 Luciferase-like monooxygenase 1 324 8.4E-93 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS31370 552ef0b35ce05afd187cf4713dc29098 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 379 71.661 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM474_RS31370 552ef0b35ce05afd187cf4713dc29098 381 SUPERFAMILY SSF51679 1 349 3.79E-102 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS31370 552ef0b35ce05afd187cf4713dc29098 381 Gene3D G3DSA:3.20.20.30 1 353 2.2E-94 T 29-03-2018 AM474_RS31370 552ef0b35ce05afd187cf4713dc29098 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 1.3E-192 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM474_RS19650 99e2a380ade5573095602c88dc02dfbd 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM474_RS19650 99e2a380ade5573095602c88dc02dfbd 390 Gene3D G3DSA:3.40.640.10 47 292 1.3E-56 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS19650 99e2a380ade5573095602c88dc02dfbd 390 Gene3D G3DSA:3.90.1150.10 293 388 2.5E-19 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19650 99e2a380ade5573095602c88dc02dfbd 390 SUPERFAMILY SSF53383 6 387 6.66E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS19650 99e2a380ade5573095602c88dc02dfbd 390 Pfam PF00155 Aminotransferase class I and II 33 381 3.8E-54 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF54373 270 360 1.11E-17 T 29-03-2018 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 50.179 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 1 54 2.07E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 360 416 2.07E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 SUPERFAMILY SSF51905 107 270 2.07E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.50.50.60 348 425 8.1E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.30.9.10 136 216 2.4E-6 T 29-03-2018 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Pfam PF01266 FAD dependent oxidoreductase 3 398 1.0E-70 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.30.9.10 217 347 7.5E-21 T 29-03-2018 AM474_RS16290 80ba7b1828922b7c1092a7f4435af112 432 Gene3D G3DSA:3.40.50.720 1 135 1.6E-10 T 29-03-2018 AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 SUPERFAMILY SSF51604 129 370 3.67E-61 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 Gene3D G3DSA:3.30.390.10 1 133 7.3E-33 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 SMART SM00922 147 245 3.5E-17 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 129 1.3E-35 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 Pfam PF13378 Enolase C-terminal domain-like 152 365 2.7E-44 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 Gene3D G3DSA:3.20.20.120 134 373 6.4E-49 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 104 129 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 195 226 - T 29-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 6 372 9.4E-152 T 29-03-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 AM474_RS32195 cf1432d1c64c6ad813e3f3a3d214c69c 373 SUPERFAMILY SSF54826 6 130 1.44E-32 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS24535 b8a71d4511ce558b9109ed181b917354 106 Pfam PF09634 Protein of unknown function (DUF2025) 1 105 3.6E-59 T 29-03-2018 IPR023117 PA1123-like domain AM474_RS24535 b8a71d4511ce558b9109ed181b917354 106 SUPERFAMILY SSF160477 1 105 6.8E-56 T 29-03-2018 IPR023117 PA1123-like domain AM474_RS24535 b8a71d4511ce558b9109ed181b917354 106 Gene3D G3DSA:3.90.1650.10 1 105 2.9E-56 T 29-03-2018 IPR023117 PA1123-like domain AM474_RS09930 4ded22c348d9b3b047c87fb00ab5e786 197 Gene3D G3DSA:2.30.130.40 1 111 1.5E-27 T 29-03-2018 AM474_RS09930 4ded22c348d9b3b047c87fb00ab5e786 197 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 188 8.6E-20 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS09930 4ded22c348d9b3b047c87fb00ab5e786 197 Gene3D G3DSA:1.10.4060.10 120 196 2.1E-4 T 29-03-2018 AM474_RS09930 4ded22c348d9b3b047c87fb00ab5e786 197 SUPERFAMILY SSF88697 1 188 6.46E-45 T 29-03-2018 IPR015947 PUA-like domain AM474_RS09930 4ded22c348d9b3b047c87fb00ab5e786 197 SMART SM00464 2 192 4.1E-9 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 3.3E-42 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 Pfam PF01252 Signal peptidase (SPase) II 16 158 3.3E-39 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 164 17.719 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 5.1E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 5.1E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS20550 b1c3b0acc8a50c20fc6a36e124eced9e 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 5.1E-19 T 29-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 AM474_RS03120 862d4cefac8d51dbaf3e7596b8590d32 505 Pfam PF07916 TraG-like protein, N-terminal region 10 487 9.4E-95 T 29-03-2018 IPR012931 TraG-like, N-terminal AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 Pfam PF06744 Type VI secretion protein IcmF C-terminal 923 1123 6.5E-57 T 29-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 Gene3D G3DSA:3.40.50.300 143 509 4.6E-7 T 29-03-2018 AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 SUPERFAMILY SSF52540 117 332 1.16E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 Pfam PF14331 ImcF-related N-terminal domain 198 452 9.5E-78 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 18 1172 0.0 T 29-03-2018 IPR017731 Type VI secretion system, IcmF AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 Gene3D G3DSA:3.40.50.300 64 142 0.0011 T 29-03-2018 AM474_RS27560 d94e44e2334fc803df6aa5af770bbf77 1175 Pfam PF06761 Intracellular multiplication and human macrophage-killing 518 792 1.1E-69 T 29-03-2018 IPR009612 ImcF-related AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Gene3D G3DSA:3.10.20.30 1 106 2.2E-20 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 SUPERFAMILY SSF63380 107 204 6.09E-24 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 SUPERFAMILY SSF54292 3 88 1.84E-22 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Gene3D G3DSA:2.40.30.10 107 205 1.6E-18 T 29-03-2018 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 SUPERFAMILY SSF52343 206 336 8.51E-37 T 29-03-2018 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 1.0E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 303 311 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 247 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 213 232 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 154 161 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00410 Phenol hydroxylase reductase family signature 137 149 3.8E-26 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Pfam PF00175 Oxidoreductase NAD-binding domain 214 317 8.1E-21 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Gene3D G3DSA:3.40.50.80 206 337 2.9E-26 T 29-03-2018 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 Pfam PF00970 Oxidoreductase FAD-binding domain 111 204 1.3E-21 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 303 311 1.8E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 232 1.8E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 161 1.8E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32230 94cc3c5ed2fb97c302654a7593ca9797 340 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 1.8E-6 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 Pfam PF12833 Helix-turn-helix domain 211 289 1.3E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 Gene3D G3DSA:3.90.1240.10 183 255 7.2E-13 T 29-03-2018 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 SMART SM00342 205 288 6.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.6E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.6E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF51215 29 174 9.68E-29 T 29-03-2018 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF46689 191 236 1.34E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 Gene3D G3DSA:1.10.10.60 256 292 3.0E-15 T 29-03-2018 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 SUPERFAMILY SSF46689 242 289 4.93E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 Pfam PF02311 AraC-like ligand binding domain 44 153 2.5E-20 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS22380 29f69d924300ae24598f35f8a8912275 293 Gene3D G3DSA:2.60.120.280 23 182 7.4E-22 T 29-03-2018 AM474_RS18260 5985f0898c424d3a2a9e9f4dc86ee5ae 258 Gene3D G3DSA:3.40.190.10 141 256 2.7E-5 T 29-03-2018 AM474_RS18260 5985f0898c424d3a2a9e9f4dc86ee5ae 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 238 2.4E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS18260 5985f0898c424d3a2a9e9f4dc86ee5ae 258 Gene3D G3DSA:3.40.190.10 17 140 1.4E-15 T 29-03-2018 AM474_RS18260 5985f0898c424d3a2a9e9f4dc86ee5ae 258 SMART SM00062 22 243 9.7E-11 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS18260 5985f0898c424d3a2a9e9f4dc86ee5ae 258 SUPERFAMILY SSF53850 23 241 2.8E-35 T 29-03-2018 AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 5 453 5.9E-179 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 SUPERFAMILY SSF53383 74 374 5.51E-43 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 Pfam PF12390 Selenocysteine synthase N terminal 5 42 1.4E-8 T 29-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 466 238.702 T 29-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 Gene3D G3DSA:3.40.640.10 91 350 6.9E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS19185 99904f5c6663786e166f8eb4ca30e6a3 468 Pfam PF03841 L-seryl-tRNA selenium transferase 79 450 1.6E-169 T 29-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 AM474_RS25190 04c7cab8ec68e0d38225f2447011d081 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 44 468 2.3E-72 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS25190 04c7cab8ec68e0d38225f2447011d081 482 Pfam PF02321 Outer membrane efflux protein 63 256 1.1E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS25190 04c7cab8ec68e0d38225f2447011d081 482 Pfam PF02321 Outer membrane efflux protein 288 466 5.7E-15 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS25190 04c7cab8ec68e0d38225f2447011d081 482 Gene3D G3DSA:1.20.1600.10 19 474 3.2E-70 T 29-03-2018 AM474_RS25190 04c7cab8ec68e0d38225f2447011d081 482 SUPERFAMILY SSF56954 6 471 3.4E-80 T 29-03-2018 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 Gene3D G3DSA:3.90.1150.10 302 417 1.6E-14 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 PIRSF PIRSF000521 1 129 2.2E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 PIRSF PIRSF000521 123 156 2.1 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 PIRSF PIRSF000521 183 414 6.6E-18 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 Gene3D G3DSA:3.40.640.10 48 301 2.6E-60 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 Pfam PF00202 Aminotransferase class-III 22 407 9.6E-74 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 SUPERFAMILY SSF53383 10 411 4.69E-100 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS30480 4039baa6878b2857bbc4f5a8a3a60bd1 417 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 233 269 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 640 681 6.7E-16 T 29-03-2018 IPR020011 Motility protein FimV, C-terminal AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 Gene3D G3DSA:1.25.40.10 615 683 0.0078 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 Gene3D G3DSA:1.25.40.10 434 572 9.2E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 Gene3D G3DSA:3.10.350.10 172 227 2.5E-5 T 29-03-2018 AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 Gene3D G3DSA:1.10.287.620 228 388 1.2E-7 T 29-03-2018 AM474_RS06035 efedb4210cc3e10f2cf5c144a5f36771 683 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 182 235 4.6E-12 T 29-03-2018 IPR020012 Motility protein FimV, N-terminal AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 247 5.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 231 5.7E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 Pfam PF12833 Helix-turn-helix domain 171 247 4.4E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 199 243 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 SMART SM00342 165 247 6.0E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 SUPERFAMILY SSF51182 20 213 4.36E-13 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 Gene3D G3DSA:1.10.10.60 145 204 1.4E-12 T 29-03-2018 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 Pfam PF02311 AraC-like ligand binding domain 18 79 6.4E-7 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 Gene3D G3DSA:2.60.120.10 8 84 4.5E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 Gene3D G3DSA:1.10.10.60 205 253 4.0E-10 T 29-03-2018 AM474_RS32090 f06fdd390244f69a6e9233bd98ac544a 255 SUPERFAMILY SSF46689 202 248 1.48E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04710 ffc84f2d9890bd039672dadf5dd0c75b 174 SUPERFAMILY SSF103054 99 171 5.1E-15 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM474_RS04710 ffc84f2d9890bd039672dadf5dd0c75b 174 Pfam PF04612 Type II secretion system (T2SS), protein M 18 171 4.3E-45 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM474_RS04710 ffc84f2d9890bd039672dadf5dd0c75b 174 Gene3D G3DSA:3.30.1360.100 100 172 2.1E-20 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM474_RS04710 ffc84f2d9890bd039672dadf5dd0c75b 174 PIRSF PIRSF006291 15 174 1.1E-26 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF47781 18 90 1.04E-8 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 SUPERFAMILY SSF102712 121 197 1.83E-5 T 29-03-2018 AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 Gene3D G3DSA:3.40.140.10 99 224 2.4E-46 T 29-03-2018 AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 7.4E-74 T 29-03-2018 IPR001405 RadC protein AM474_RS16215 24581ec7a8d0038bb40341c79ac17967 224 Pfam PF04002 RadC-like JAB domain 104 222 4.2E-43 T 29-03-2018 IPR025657 RadC-like JAB domain AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 Hamap MF_01932 AMP nucleosidase [amn]. 16 499 59.128 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 SUPERFAMILY SSF53167 22 499 1.44E-143 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 Gene3D G3DSA:3.30.1730.10 19 182 7.4E-48 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 Gene3D G3DSA:3.40.50.1580 188 482 8.4E-58 T 29-03-2018 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 25 179 5.6E-50 T 29-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 24 499 2.2E-251 T 29-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AM474_RS09725 a600e5a6183b9917a21ee9d161c54c67 499 Pfam PF01048 Phosphorylase superfamily 284 468 2.1E-16 T 29-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 22 221 1.4E-116 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 112.439 T 29-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 SMART SM00479 30 215 7.7E-24 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 Gene3D G3DSA:3.30.420.10 22 223 2.7E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 Pfam PF00929 Exonuclease 32 206 1.6E-32 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS06965 f35890dc9ed1ff32c385b91bf416066b 224 SUPERFAMILY SSF53098 21 219 3.19E-57 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS26830 6e374accd2f16b385c7fbdf080230e7f 109 SUPERFAMILY SSF103481 12 108 3.01E-17 T 29-03-2018 AM474_RS26830 6e374accd2f16b385c7fbdf080230e7f 109 Pfam PF00893 Small Multidrug Resistance protein 5 99 1.5E-26 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.40.50.720 162 333 3.3E-32 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF51905 4 318 3.65E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 SUPERFAMILY SSF55424 343 461 5.84E-29 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.30.390.30 334 460 2.1E-31 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 1.2E-62 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 73.11 T 29-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 5.0E-27 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 Gene3D G3DSA:3.50.50.60 3 161 9.0E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-50 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PIRSF PIRSF000350 2 459 6.4E-68 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-30 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 5.9E-30 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.9E-30 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-30 T 29-03-2018 AM474_RS04165 1f2b87d6dff7464b8d6387a7da584fe2 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 5.9E-30 T 29-03-2018 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SUPERFAMILY SSF55781 311 493 4.51E-42 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SMART SM00065 139 313 6.5E-10 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SUPERFAMILY SSF55781 128 307 2.55E-60 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Gene3D G3DSA:3.30.450.40 125 307 1.0E-37 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 716 7.3E-13 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 PRINTS PR01033 Phytochrome signature 456 474 2.1E-22 T 29-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 PRINTS PR01033 Phytochrome signature 241 262 2.1E-22 T 29-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 PRINTS PR01033 Phytochrome signature 339 359 2.1E-22 T 29-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 PRINTS PR01033 Phytochrome signature 422 441 2.1E-22 T 29-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 PRINTS PR01033 Phytochrome signature 154 173 2.1E-22 T 29-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Gene3D G3DSA:1.10.287.130 493 562 4.5E-14 T 29-03-2018 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Gene3D G3DSA:3.30.565.10 571 728 3.0E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Pfam PF00360 Phytochrome region 324 496 1.6E-47 T 29-03-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SUPERFAMILY SSF55785 6 115 1.62E-25 T 29-03-2018 IPR000014 PAS domain AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 566 1.3E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Gene3D G3DSA:3.30.450.20 3 113 2.0E-15 T 29-03-2018 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SUPERFAMILY SSF55874 556 721 1.83E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Pfam PF08446 PAS fold 12 76 1.0E-10 T 29-03-2018 IPR013654 PAS fold-2 GO:0006355 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SMART SM00388 503 566 1.2E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 Pfam PF01590 GAF domain 141 289 9.6E-18 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SMART SM00387 610 721 3.4E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10455 018688c088ced767bafcc32c90edbac4 728 SUPERFAMILY SSF47384 494 566 5.49E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19690 61c46cb4c3dbe890092c91ae7c2ea6a9 149 Pfam PF04214 Protein of unknown function, DUF 53 120 1.5E-27 T 29-03-2018 IPR007332 Protein of unknown function DUF411 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 6.3E-85 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 SUPERFAMILY SSF54506 2 277 2.27E-67 T 29-03-2018 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 PIRSF PIRSF016184 1 278 1.8E-81 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 125 267 2.6E-34 T 29-03-2018 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 1.0E-55 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS10930 6c0394fde8e2690c49765f7e901c3556 278 Gene3D G3DSA:3.10.310.10 1 124 3.6E-29 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 SMART SM00304 381 435 1.2E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Gene3D G3DSA:1.10.287.950 496 712 1.6E-53 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Gene3D G3DSA:1.10.287.1060 410 495 1.3E-5 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Pfam PF02743 Cache domain 49 287 3.3E-16 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 SUPERFAMILY SSF58104 403 712 3.14E-82 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Gene3D G3DSA:3.30.450.20 224 349 1.2E-10 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 SMART SM00283 450 711 7.9E-82 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Pfam PF00672 HAMP domain 383 431 3.0E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Gene3D G3DSA:3.30.450.20 96 223 2.8E-16 T 29-03-2018 AM474_RS20155 0395205772a6e4da53ae540d0647202c 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 495 678 6.5E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21640 c319c1a95ecd54434c9dcbe4e1921677 190 PIRSF PIRSF011489 1 190 4.5E-82 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM474_RS21640 c319c1a95ecd54434c9dcbe4e1921677 190 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 1.9E-34 T 29-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 SMART SM00304 183 236 9.6E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 408 1.8E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 SUPERFAMILY SSF55073 254 408 1.02E-44 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 Gene3D G3DSA:3.30.70.270 237 413 1.9E-58 T 29-03-2018 AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 Pfam PF17152 Periplasmic sensor domain 45 145 3.6E-34 T 29-03-2018 IPR033417 Periplasmic sensor domain CHASE8 AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 405 1.1E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24520 663e2fc9051627cd1080b53cd4335084 435 SMART SM00267 238 411 3.6E-56 T 29-03-2018 IPR000160 GGDEF domain AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 88 2.1E-22 T 29-03-2018 IPR005228 Conserved hypothetical protein CHP00251 AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 Gene3D G3DSA:3.30.1200.10 1 96 1.6E-30 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 8.6E-26 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 SMART SM01152 7 83 3.7E-38 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 20.444 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM474_RS12750 6fae3454bad0a04400a814b3519c8ec6 98 SUPERFAMILY SSF69786 2 91 4.19E-30 T 29-03-2018 IPR003746 Protein of unknown function DUF167 AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 SUPERFAMILY SSF74863 35 151 1.31E-38 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Pfam PF11412 Disulphide bond corrector protein DsbC 37 150 4.1E-35 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Gene3D G3DSA:3.40.30.10 478 591 2.3E-14 T 29-03-2018 AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 SUPERFAMILY SSF52833 474 585 8.93E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 588 37.644 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Gene3D G3DSA:2.60.40.1250 33 160 7.2E-39 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 180 385 1.5E-11 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM474_RS18985 b94f4d9a3075b93d8f6d1c946c4c3987 591 Pfam PF13899 Thioredoxin-like 479 561 4.0E-19 T 29-03-2018 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 8.6E-15 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 8.6E-15 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 8.6E-15 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 8.6E-15 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 SMART SM01130 2 290 1.9E-90 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.2E-55 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 Gene3D G3DSA:3.20.20.70 1 300 1.6E-82 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 PIRSF PIRSF001365 1 299 1.0E-80 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS10815 f6ab9b5e47933d5310cefca35af980e5 303 SUPERFAMILY SSF51569 2 289 7.64E-84 T 29-03-2018 AM474_RS08765 a8afbd032277a9587e7dfab3f481d1bd 128 SUPERFAMILY SSF82649 1 125 3.66E-49 T 29-03-2018 AM474_RS08765 a8afbd032277a9587e7dfab3f481d1bd 128 Pfam PF01592 NifU-like N terminal domain 2 125 3.5E-58 T 29-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM474_RS08765 a8afbd032277a9587e7dfab3f481d1bd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.5E-69 T 29-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM474_RS08765 a8afbd032277a9587e7dfab3f481d1bd 128 Gene3D G3DSA:3.90.1010.10 1 127 3.2E-52 T 29-03-2018 AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 468 3.2E-233 T 29-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 SUPERFAMILY SSF53448 1 281 8.56E-69 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 SUPERFAMILY SSF51182 184 469 4.67E-88 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 Gene3D G3DSA:2.60.120.10 337 446 1.6E-31 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 6.7E-77 T 29-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 Gene3D G3DSA:3.90.550.10 1 336 2.5E-93 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07085 88a3326f25027043d59e8cb7c28f413c 481 Pfam PF00483 Nucleotidyl transferase 3 286 6.0E-77 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 Gene3D G3DSA:1.10.240.10 214 301 2.1E-20 T 29-03-2018 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 SUPERFAMILY SSF52374 4 333 5.18E-76 T 29-03-2018 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 SUPERFAMILY SSF160113 356 398 2.49E-6 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 334 37.196 T 29-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 333 3.8E-93 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.4E-17 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.4E-17 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.4E-17 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.4E-17 T 29-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 Gene3D G3DSA:3.40.50.620 1 213 1.1E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21190 0bf038b2558c472a6ce7d20d636f97a5 448 Pfam PF00579 tRNA synthetases class I (W and Y) 3 243 9.3E-50 T 29-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS03495 3fe869f054f67a13fbb5438028739590 311 SUPERFAMILY SSF53474 29 307 2.7E-54 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03495 3fe869f054f67a13fbb5438028739590 311 Pfam PF00561 alpha/beta hydrolase fold 35 280 2.5E-25 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03495 3fe869f054f67a13fbb5438028739590 311 Gene3D G3DSA:3.40.50.1820 23 303 2.9E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 SUPERFAMILY SSF55021 667 743 5.0E-15 T 29-03-2018 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 SUPERFAMILY SSF81271 407 475 5.01E-22 T 29-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Gene3D G3DSA:3.10.20.30 410 484 7.9E-24 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Gene3D G3DSA:3.30.70.260 665 746 3.5E-12 T 29-03-2018 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 SUPERFAMILY SSF109604 18 218 2.57E-49 T 29-03-2018 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 69 742 1.6E-189 T 29-03-2018 IPR004811 RelA/SpoT family GO:0015969 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Pfam PF02824 TGS domain 416 475 7.3E-22 T 29-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 SUPERFAMILY SSF81301 207 420 2.62E-63 T 29-03-2018 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Pfam PF13291 ACT domain 666 743 2.5E-19 T 29-03-2018 IPR002912 ACT domain AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Pfam PF13328 HD domain 40 202 6.3E-46 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Pfam PF04607 Region found in RelA / SpoT proteins 262 370 7.2E-38 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 Gene3D G3DSA:3.30.460.10 219 352 7.5E-45 T 29-03-2018 AM474_RS23380 178f0d1ec695638eee112f1daba41fad 747 SMART SM00954 262 372 3.9E-66 T 29-03-2018 IPR007685 RelA/SpoT GO:0015969 AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 Gene3D G3DSA:3.40.190.10 179 264 6.5E-25 T 29-03-2018 AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 SUPERFAMILY SSF53850 90 294 8.69E-41 T 29-03-2018 AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 Gene3D G3DSA:1.10.10.10 1 93 3.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 Gene3D G3DSA:3.40.190.10 94 178 4.3E-12 T 29-03-2018 AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 Pfam PF03466 LysR substrate binding domain 89 293 2.6E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03370 39b92a7c0dfaf7b2208fc16429a8f7b4 323 SUPERFAMILY SSF46785 5 111 3.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 Gene3D G3DSA:3.20.20.70 1 331 2.0E-105 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 7.1E-217 T 29-03-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 6.1E-92 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 PIRSF PIRSF001359 1 329 1.4E-83 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 8.2E-98 T 29-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AM474_RS11905 4a1888f4f59c5cebc243ab1d0d538d93 354 SUPERFAMILY SSF51569 3 328 7.77E-107 T 29-03-2018 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 SUPERFAMILY SSF53335 135 431 1.02E-71 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS14775 fd072aca29115b7e05675238721b7439 434 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 29-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Gene3D G3DSA:1.10.287.730 143 169 4.4E-10 T 29-03-2018 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Gene3D G3DSA:3.40.50.150 228 434 2.0E-53 T 29-03-2018 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 SUPERFAMILY SSF48013 1 146 4.45E-35 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Pfam PF01029 NusB family 1 123 2.0E-21 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.6E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 1.6E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.6E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 1.6E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 1.6E-28 T 29-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Gene3D G3DSA:3.30.70.1170 170 227 2.6E-19 T 29-03-2018 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 428 1.7E-62 T 29-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 430 9.0E-129 T 29-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS14775 fd072aca29115b7e05675238721b7439 434 Gene3D G3DSA:1.10.940.10 1 142 5.5E-30 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS16445 37405507ebcc4689d3c63e0e1eaa0def 69 Pfam PF06945 Protein of unknown function (DUF1289) 16 61 1.9E-15 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AM474_RS20045 2160c2cd0c045ccf374f03203434f3a2 315 Pfam PF05229 Spore Coat Protein U domain 185 311 3.9E-32 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20045 2160c2cd0c045ccf374f03203434f3a2 315 Pfam PF05229 Spore Coat Protein U domain 14 160 5.6E-25 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20045 2160c2cd0c045ccf374f03203434f3a2 315 SMART SM00972 257 312 1.9E-15 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20045 2160c2cd0c045ccf374f03203434f3a2 315 SMART SM00972 97 162 5.0E-16 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 SMART SM00382 150 293 7.1E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:1.10.10.60 406 460 7.0E-11 T 29-03-2018 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:3.40.50.2300 1 136 7.9E-33 T 29-03-2018 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 1.5E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF46689 343 458 1.34E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF52172 4 174 2.85E-41 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 SUPERFAMILY SSF52540 132 371 1.62E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:3.40.50.300 137 302 8.4E-27 T 29-03-2018 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 SMART SM00448 3 114 1.3E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 7.0E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 7.0E-6 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Gene3D G3DSA:1.10.8.60 303 374 5.5E-22 T 29-03-2018 AM474_RS24400 0a64fbfeb1cb94d592a070fd1e9f278d 473 Pfam PF00158 Sigma-54 interaction domain 135 296 3.6E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS05390 e768c252af7b415b4dea79b8d28ceac0 244 SUPERFAMILY SSF52833 31 240 2.78E-28 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS05390 e768c252af7b415b4dea79b8d28ceac0 244 Gene3D G3DSA:3.40.30.10 30 243 4.5E-27 T 29-03-2018 AM474_RS21265 a939108c9c2183da2fbf196a8a0123b0 125 Pfam PF02021 Uncharacterised protein family UPF0102 14 105 5.5E-26 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM474_RS21265 a939108c9c2183da2fbf196a8a0123b0 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 7 118 23.86 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM474_RS21265 a939108c9c2183da2fbf196a8a0123b0 125 SUPERFAMILY SSF52980 8 118 3.31E-22 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS21265 a939108c9c2183da2fbf196a8a0123b0 125 Gene3D G3DSA:3.40.1350.10 13 125 2.4E-37 T 29-03-2018 AM474_RS21265 a939108c9c2183da2fbf196a8a0123b0 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 124 3.0E-31 T 29-03-2018 IPR003509 Uncharacterised protein family UPF0102 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Gene3D G3DSA:3.30.43.10 1 72 7.9E-24 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 216 338 2.9E-32 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Gene3D G3DSA:3.90.78.10 229 339 1.2E-38 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Gene3D G3DSA:3.30.465.10 77 228 6.2E-50 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 SUPERFAMILY SSF56176 10 197 1.54E-46 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 339 88.4 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 Pfam PF01565 FAD binding domain 24 156 1.6E-26 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 SUPERFAMILY SSF56194 212 338 2.88E-46 T 29-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS04090 7c86b0aa55d038470cae0a5714523a32 339 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 335 3.8E-71 T 29-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 SUPERFAMILY SSF52540 72 357 4.07E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 Gene3D G3DSA:3.40.50.300 9 219 4.5E-60 T 29-03-2018 AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 SMART SM00490 256 337 1.2E-27 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 Pfam PF00270 DEAD/DEAH box helicase 28 195 7.6E-47 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 Pfam PF00271 Helicase conserved C-terminal domain 230 337 1.3E-25 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 Gene3D G3DSA:3.40.50.300 220 366 1.7E-39 T 29-03-2018 AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 SMART SM00487 23 220 9.1E-59 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS12420 6d0c2ac1dd815fb0ee93e37afd966823 458 Pfam PF03880 DbpA RNA binding domain 386 456 7.0E-24 T 29-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.1E-34 T 29-03-2018 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.8E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.8E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.8E-24 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.0E-26 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS27680 b247c0ca323f93920f157942e67bf7fd 88 PIRSF PIRSF004669 1 88 1.7E-25 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 Gene3D G3DSA:3.40.50.2300 2 127 3.1E-36 T 29-03-2018 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 SUPERFAMILY SSF52172 3 133 3.98E-33 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS11620 ce19a4b647afb21915221c6001467326 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 SMART SM00448 3 116 3.4E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.7E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.7E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.7E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 SUPERFAMILY SSF46894 138 209 3.4E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 SMART SM00421 147 204 1.4E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS11620 ce19a4b647afb21915221c6001467326 210 Gene3D G3DSA:1.10.10.10 128 210 5.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11620 ce19a4b647afb21915221c6001467326 210 Pfam PF00072 Response regulator receiver domain 5 117 4.5E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03900 e1755d2f1459c9c8e1f6c89f876eb442 214 Pfam PF13519 von Willebrand factor type A domain 59 164 1.8E-9 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS03900 e1755d2f1459c9c8e1f6c89f876eb442 214 Gene3D G3DSA:3.40.50.410 27 201 4.4E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS03900 e1755d2f1459c9c8e1f6c89f876eb442 214 SUPERFAMILY SSF53300 60 176 2.63E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 SUPERFAMILY SSF53850 11 259 1.34E-52 T 29-03-2018 AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 136 215 3.7E-8 T 29-03-2018 AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 3.9E-40 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 Gene3D G3DSA:3.40.190.10 21 135 1.7E-30 T 29-03-2018 AM474_RS06785 55e303d8a190492b44af291bf6405af2 268 SMART SM00062 38 261 2.0E-56 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 Gene3D G3DSA:3.40.50.720 111 289 2.3E-58 T 29-03-2018 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 SUPERFAMILY SSF52283 1 133 1.4E-28 T 29-03-2018 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 318 2.0E-28 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 175 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 Gene3D G3DSA:3.40.50.720 1 110 1.6E-27 T 29-03-2018 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 4.4E-63 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS30930 87b76b988d5afbd805f6761b0ad241e2 328 SUPERFAMILY SSF51735 99 287 1.41E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS24495 19c151a2cfaf0e6aca05489f63dcf631 774 SUPERFAMILY SSF53649 222 551 2.02E-48 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS24495 19c151a2cfaf0e6aca05489f63dcf631 774 Gene3D G3DSA:3.40.720.10 223 536 6.4E-33 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS24495 19c151a2cfaf0e6aca05489f63dcf631 774 Pfam PF00884 Sulfatase 224 501 3.5E-37 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS05045 a99d31932c41b9129231357bbcd70d8f 229 Hamap MF_00238 Cytidylate kinase [cmk]. 6 226 34.652 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM474_RS05045 a99d31932c41b9129231357bbcd70d8f 229 Gene3D G3DSA:3.40.50.300 5 225 1.6E-50 T 29-03-2018 AM474_RS05045 a99d31932c41b9129231357bbcd70d8f 229 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 220 6.4E-82 T 29-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM474_RS05045 a99d31932c41b9129231357bbcd70d8f 229 SUPERFAMILY SSF52540 7 223 1.12E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05045 a99d31932c41b9129231357bbcd70d8f 229 Pfam PF02224 Cytidylate kinase 9 223 5.7E-77 T 29-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Pfam PF16124 RecQ zinc-binding 335 396 1.4E-20 T 29-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Gene3D G3DSA:1.10.150.80 519 612 1.3E-25 T 29-03-2018 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Gene3D G3DSA:3.40.50.300 1 200 8.4E-35 T 29-03-2018 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SUPERFAMILY SSF47819 527 602 3.05E-22 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Gene3D G3DSA:3.40.50.300 204 346 7.4E-28 T 29-03-2018 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Pfam PF09382 RQC domain 401 510 8.1E-36 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 1.3E-153 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 599 1.6E-245 T 29-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Pfam PF00271 Helicase conserved C-terminal domain 219 322 4.5E-16 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Pfam PF00270 DEAD/DEAH box helicase 21 180 4.2E-19 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Gene3D G3DSA:1.10.10.10 613 657 8.0E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SMART SM00490 242 323 4.6E-25 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SUPERFAMILY SSF52540 3 189 1.89E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Gene3D G3DSA:1.10.10.10 347 516 1.0E-50 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SMART SM00487 14 210 6.6E-31 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SUPERFAMILY SSF52540 200 444 4.62E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 Pfam PF00570 HRDC domain 533 598 1.7E-22 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SMART SM00956 404 507 6.9E-47 T 29-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 AM474_RS06060 00df60c7e50b3e7ce32e261455d8fed0 712 SMART SM00341 528 608 4.2E-20 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 ProSitePatterns PS00080 Multicopper oxidases signature 2. 596 607 - T 29-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 SUPERFAMILY SSF49503 464 613 5.1E-36 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 4.1E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Pfam PF07731 Multicopper oxidase 503 616 1.7E-25 T 29-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 SUPERFAMILY SSF49503 46 184 7.14E-39 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 SUPERFAMILY SSF49503 165 380 1.19E-56 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Pfam PF00394 Multicopper oxidase 171 346 5.6E-32 T 29-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 3 613 1.8E-296 T 29-03-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Gene3D G3DSA:2.60.40.420 388 614 7.6E-52 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 ProSitePatterns PS00079 Multicopper oxidases signature 1. 591 611 - T 29-03-2018 IPR033138 Multicopper oxidases, conserved site AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Gene3D G3DSA:2.60.40.420 36 159 3.0E-31 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Gene3D G3DSA:2.60.40.420 167 351 1.0E-44 T 29-03-2018 IPR008972 Cupredoxin AM474_RS29645 3068d10bcb64fa64f0f3f9ac7232aef0 619 Pfam PF07732 Multicopper oxidase 52 162 4.4E-40 T 29-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AM474_RS07305 4a745518570020922cf13e412545b894 265 SUPERFAMILY SSF52096 10 263 4.67E-85 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS07305 4a745518570020922cf13e412545b894 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 262 5.2E-69 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS07305 4a745518570020922cf13e412545b894 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS07305 4a745518570020922cf13e412545b894 265 Gene3D G3DSA:1.10.12.10 226 262 3.5E-20 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS07305 4a745518570020922cf13e412545b894 265 Gene3D G3DSA:3.90.226.10 10 225 9.6E-68 T 29-03-2018 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:3.90.199.10 34 286 1.5E-116 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 885 23.937 T 29-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 SMART SM00434 11 500 0.0 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 638 1.4E-298 T 29-03-2018 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:2.120.10.90 534 902 3.9E-126 T 29-03-2018 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:1.10.268.10 376 498 5.2E-48 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 SUPERFAMILY SSF56719 30 523 2.35E-184 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 837 883 2.1E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 586 1.2E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 788 833 2.1E-12 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.6E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 737 781 1.5E-13 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 689 732 3.1E-8 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 4.5E-153 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS05070 f951ad42c77688df030859159a66a40f 923 SUPERFAMILY SSF101904 683 898 1.7E-99 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM474_RS05070 f951ad42c77688df030859159a66a40f 923 SUPERFAMILY SSF101904 534 639 1.7E-99 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM474_RS05070 f951ad42c77688df030859159a66a40f 923 Gene3D G3DSA:3.90.199.10 287 375 7.8E-8 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 SUPERFAMILY SSF46785 5 88 1.25E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 Gene3D G3DSA:3.40.190.10 181 262 1.7E-8 T 29-03-2018 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 Gene3D G3DSA:3.40.190.10 91 180 1.8E-9 T 29-03-2018 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 SUPERFAMILY SSF53850 91 296 3.98E-25 T 29-03-2018 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 Pfam PF03466 LysR substrate binding domain 90 293 2.3E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 Gene3D G3DSA:1.10.10.10 1 85 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.7E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12290 ec7ae53d59ad306d5d9c0ded9916c32d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29385 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 237 517 5.97E-91 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS29385 888c3625c0936528bc1504de3305187e 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-155 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS29385 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 274 530 1.3E-72 T 29-03-2018 AM474_RS29385 888c3625c0936528bc1504de3305187e 535 SUPERFAMILY SSF52096 23 270 2.99E-74 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS29385 888c3625c0936528bc1504de3305187e 535 Gene3D G3DSA:3.90.226.10 9 273 5.6E-71 T 29-03-2018 AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 345 355 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 SUPERFAMILY SSF53335 10 362 1.91E-57 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 363 7.7E-178 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 363 5.0E-171 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 296 325 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 Gene3D G3DSA:3.40.50.150 160 363 5.7E-35 T 29-03-2018 AM474_RS19660 2e2c3761876c92515161bb79d6cb3b54 363 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 363 41.261 T 29-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 AM474_RS16995 4391c7b9ca167d75cb3003a2a8a9751d 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 1.8E-124 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM474_RS16995 4391c7b9ca167d75cb3003a2a8a9751d 427 PIRSF PIRSF006066 1 427 3.2E-157 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS16995 4391c7b9ca167d75cb3003a2a8a9751d 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 5.0E-149 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 Pfam PF12833 Helix-turn-helix domain 258 336 1.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 SUPERFAMILY SSF46689 287 337 1.43E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 5.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 5.7E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 208 3.7E-52 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 Gene3D G3DSA:1.10.10.60 277 338 1.3E-14 T 29-03-2018 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 Gene3D G3DSA:1.10.10.60 232 276 8.6E-4 T 29-03-2018 AM474_RS04350 da2651adf279c035ed25f9a356b9cf0e 343 SMART SM00342 252 334 2.0E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 SUPERFAMILY SSF55031 221 336 2.84E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 Gene3D G3DSA:3.40.630.10 250 422 2.5E-21 T 29-03-2018 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 PIRSF PIRSF001235 12 421 8.8E-135 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 Pfam PF07687 Peptidase dimerisation domain 220 319 1.6E-5 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 Gene3D G3DSA:3.40.630.10 10 249 3.4E-46 T 29-03-2018 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 Pfam PF01546 Peptidase family M20/M25/M40 88 414 8.4E-39 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 SUPERFAMILY SSF53187 6 231 1.09E-99 T 29-03-2018 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 SUPERFAMILY SSF53187 344 415 1.09E-99 T 29-03-2018 AM474_RS12470 0a600b627d8eb8f5b01a939b3a5f133c 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 18 415 2.3E-136 T 29-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 Gene3D G3DSA:1.10.405.10 134 211 1.1E-11 T 29-03-2018 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 SUPERFAMILY SSF54373 297 401 1.5E-17 T 29-03-2018 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 Gene3D G3DSA:3.90.660.10 233 393 5.6E-26 T 29-03-2018 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 1.6E-10 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 PRINTS PR00757 Flavin-containing amine oxidase signature 403 425 1.6E-10 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 PRINTS PR00757 Flavin-containing amine oxidase signature 434 451 1.6E-10 T 29-03-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 Gene3D G3DSA:3.40.50.720 19 133 7.6E-10 T 29-03-2018 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 SUPERFAMILY SSF51905 26 316 2.27E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 SUPERFAMILY SSF51905 413 456 2.27E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 Pfam PF01593 Flavin containing amine oxidoreductase 37 452 2.6E-47 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AM474_RS12595 3b32ab8655a6ee4c99e768281a3432e9 496 Gene3D G3DSA:3.50.50.60 394 461 6.2E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 176 268 2.7E-25 T 29-03-2018 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF46785 1 85 6.2E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:3.40.190.10 87 175 1.8E-18 T 29-03-2018 AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 Gene3D G3DSA:1.10.10.10 1 82 1.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 Pfam PF03466 LysR substrate binding domain 88 294 7.7E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS16090 935590f0a244a1c748ceaae8427e68fb 310 SUPERFAMILY SSF53850 88 294 1.02E-37 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:1.20.1110.10 391 689 1.5E-33 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 217 268 8.9E-5 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 288 345 7.0E-6 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 117 162 3.6E-6 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00403 Heavy-metal-associated domain 46 93 1.8E-5 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 284 354 1.44E-12 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 425 978 4.1E-180 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 28 113 7.8E-12 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 282 354 2.1E-12 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 213 281 5.6E-7 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 679 685 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 577 668 8.37E-13 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81665 424 479 8.37E-13 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00122 E1-E2 ATPase 476 657 1.6E-54 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 822 832 2.8E-23 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 875 894 2.8E-23 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 899 911 2.8E-23 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 691 2.8E-23 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 540 2.8E-23 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.1110.10 690 800 1.8E-27 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 448 959 1.3E-79 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 42 107 1.17E-11 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 214 278 2.62E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 676 695 6.34E-54 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF56784 733 975 6.34E-54 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF55008 115 177 2.62E-9 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 542 558 8.4E-16 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 218 227 8.4E-16 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 460 480 8.4E-16 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 406 418 8.4E-16 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 PRINTS PR00941 Cadmium-transporting ATPase signature 561 575 8.4E-16 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 SUPERFAMILY SSF81653 478 576 2.88E-23 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.40.50.1000 801 943 5.1E-36 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 407 978 4.4E-121 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Gene3D G3DSA:3.30.70.100 114 182 1.9E-8 T 29-03-2018 AM474_RS02835 115d34ce2b4a3ef17b29c5ebb3027ca9 984 Pfam PF00702 haloacid dehalogenase-like hydrolase 674 889 6.7E-42 T 29-03-2018 AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 Gene3D G3DSA:3.40.50.300 4 258 4.3E-65 T 29-03-2018 AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 Pfam PF00005 ABC transporter 23 164 3.9E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 SMART SM00382 31 213 2.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 SUPERFAMILY SSF50331 250 345 7.82E-12 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 SUPERFAMILY SSF52540 7 242 6.69E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 Gene3D G3DSA:2.40.50.140 279 337 2.3E-4 T 29-03-2018 AM474_RS07015 573a632998da21258f0e4c8af79fc30a 360 Pfam PF08402 TOBE domain 276 345 1.8E-10 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SMART SM00347 26 127 5.5E-23 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 6.3E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 6.3E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 6.3E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 6.3E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 SUPERFAMILY SSF46785 9 142 2.55E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Gene3D G3DSA:1.10.10.10 1 144 6.9E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06045 ed3f30ea2fc14f7b8d451f59e7eb20e4 144 Pfam PF12802 MarR family 31 91 1.1E-11 T 29-03-2018 AM474_RS00740 4273283d8fcab1c14607d4b3dee9a3d9 456 SUPERFAMILY SSF56349 98 398 2.44E-55 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS00740 4273283d8fcab1c14607d4b3dee9a3d9 456 Pfam PF13356 Arm DNA-binding domain 3 85 1.5E-17 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM474_RS00740 4273283d8fcab1c14607d4b3dee9a3d9 456 Gene3D G3DSA:1.10.150.130 88 209 4.8E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS00740 4273283d8fcab1c14607d4b3dee9a3d9 456 Pfam PF00589 Phage integrase family 210 388 8.6E-22 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS00740 4273283d8fcab1c14607d4b3dee9a3d9 456 Gene3D G3DSA:1.10.443.10 210 397 3.6E-24 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 81 110 0.52 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 48 77 3.3E-4 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 SMART SM00248 114 143 0.021 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 SUPERFAMILY SSF48403 23 167 3.59E-37 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF12796 Ankyrin repeats (3 copies) 24 109 1.9E-11 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.20 2 96 2.1E-26 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 Gene3D G3DSA:1.25.40.20 97 170 1.7E-20 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS05745 20b2cea525bd83a631edb10adb7bcdcf 171 Pfam PF00023 Ankyrin repeat 114 145 6.0E-5 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 29-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.4E-17 T 29-03-2018 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.4E-17 T 29-03-2018 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.4E-17 T 29-03-2018 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.4E-17 T 29-03-2018 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 Gene3D G3DSA:3.50.50.60 1 367 3.0E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 394 5.1E-136 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 Pfam PF01494 FAD binding domain 3 345 8.7E-24 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 SUPERFAMILY SSF51905 280 399 1.94E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16725 a3354bb136b04704a7695e3b238577b2 405 SUPERFAMILY SSF51905 1 177 1.94E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 379 399 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Gene3D G3DSA:3.40.50.280 135 206 0.052 T 29-03-2018 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 SUPERFAMILY SSF102114 469 620 4.58E-14 T 29-03-2018 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 SUPERFAMILY SSF102114 370 439 4.58E-14 T 29-03-2018 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 645 49.924 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Gene3D G3DSA:3.20.20.70 258 730 1.3E-37 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Pfam PF04055 Radical SAM superfamily 379 584 4.5E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 SMART SM00729 375 628 1.4E-7 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Pfam PF11842 Domain of unknown function (DUF3362) 593 730 4.3E-53 T 29-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 643 1.6E-264 T 29-03-2018 IPR022946 Uncharacterised protein family UPF0313 AM474_RS18560 024379bc1ac312dd3e29e9e8c15ddfcc 747 Pfam PF08497 Radical SAM N-terminal 23 378 2.0E-146 T 29-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal AM474_RS19540 31be409f61215d3456c3847c96991c27 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-36 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 SUPERFAMILY SSF47060 3 89 2.68E-34 T 29-03-2018 IPR009068 S15/NS1, RNA-binding AM474_RS19540 31be409f61215d3456c3847c96991c27 89 SMART SM01387 8 88 5.2E-50 T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 29-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-40 T 29-03-2018 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.97 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 Gene3D G3DSA:1.10.287.10 2 89 2.4E-34 T 29-03-2018 AM474_RS19540 31be409f61215d3456c3847c96991c27 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.2E-37 T 29-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS06555 461bc6ad0a8d42d296fe02df8415d2f0 228 Pfam PF04172 LrgB-like family 14 226 9.6E-70 T 29-03-2018 IPR007300 CidB/LrgB family AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF51735 123 283 7.77E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.0E-40 T 29-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.159 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 29-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.50.10860 11 140 1.6E-49 T 29-03-2018 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 3.6E-67 T 29-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 Gene3D G3DSA:3.40.50.720 141 264 3.1E-38 T 29-03-2018 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 7.5E-84 T 29-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 AM474_RS28225 ae52524c6292f844aebd870057fb6361 284 SUPERFAMILY SSF53223 1 122 4.7E-41 T 29-03-2018 AM474_RS19730 2e3e51ebcb600ccee9e883103a68aa32 255 Pfam PF00005 ABC transporter 17 167 2.6E-24 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS19730 2e3e51ebcb600ccee9e883103a68aa32 255 Gene3D G3DSA:3.40.50.300 1 236 1.9E-53 T 29-03-2018 AM474_RS19730 2e3e51ebcb600ccee9e883103a68aa32 255 SMART SM00382 26 214 9.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS19730 2e3e51ebcb600ccee9e883103a68aa32 255 SUPERFAMILY SSF52540 2 227 4.1E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09425 b3d698228532648550b5cb209048e3f7 678 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 7 632 9.8E-113 T 29-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AM474_RS09425 b3d698228532648550b5cb209048e3f7 678 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 636 2.1E-214 T 29-03-2018 IPR004814 Oligopeptide transporter OPT AM474_RS09425 b3d698228532648550b5cb209048e3f7 678 Pfam PF03169 OPT oligopeptide transporter protein 13 634 4.9E-110 T 29-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 Gene3D G3DSA:3.40.50.10730 176 309 7.8E-28 T 29-03-2018 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 Gene3D G3DSA:3.90.180.10 11 175 2.0E-49 T 29-03-2018 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 SUPERFAMILY SSF50129 9 192 1.31E-50 T 29-03-2018 IPR011032 GroES-like AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 SUPERFAMILY SSF51735 159 315 8.97E-39 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 Pfam PF00107 Zinc-binding dehydrogenase 194 320 4.4E-28 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 SMART SM00829 18 359 2.5E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 80 94 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 151 8.8E-32 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS10640 921fdda1c9c2234fe02122c83dfcfc4d 363 Pfam PF13823 Alcohol dehydrogenase GroES-associated 11 28 2.6E-6 T 29-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated AM474_RS28100 593c4af23b6a09f72659a5c2766d9cbd 162 Pfam PF03737 Aldolase/RraA 5 153 3.2E-46 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM474_RS28100 593c4af23b6a09f72659a5c2766d9cbd 162 SUPERFAMILY SSF89562 4 158 3.79E-52 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM474_RS28100 593c4af23b6a09f72659a5c2766d9cbd 162 Gene3D G3DSA:3.50.30.40 1 160 1.8E-50 T 29-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AM474_RS28100 593c4af23b6a09f72659a5c2766d9cbd 162 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.3E-73 T 29-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF47384 498 579 1.88E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF12860 PAS fold 113 213 2.7E-9 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF12860 PAS fold 232 333 5.9E-14 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00091 107 174 29.0 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00091 226 291 0.52 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00091 341 407 38.0 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.30.450.20 330 482 1.9E-26 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF55785 326 452 3.49E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 513 579 2.3E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF55874 570 734 6.29E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 337 461 3.1E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.30.565.10 583 742 7.3E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00448 757 871 2.8E-8 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00387 623 734 1.9E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF55785 212 327 3.66E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SMART SM00388 513 579 1.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF08448 PAS fold 348 456 4.1E-26 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF52172 756 877 5.41E-18 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.30.450.20 85 216 1.1E-9 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF00072 Response regulator receiver domain 759 871 1.2E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:1.10.287.130 517 575 2.6E-10 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.30.450.20 217 329 6.7E-17 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 624 733 1.1E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 712 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 731 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 687 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 673 1.2E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 SUPERFAMILY SSF55785 101 207 3.49E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.30.450.20 485 516 1.9E-4 T 29-03-2018 AM474_RS29195 b19a392c5fe27fcfe6def8de36a7a9c8 881 Gene3D G3DSA:3.40.50.2300 745 880 1.0E-17 T 29-03-2018 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 51.313 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 SUPERFAMILY SSF53649 5 79 2.36E-77 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 SUPERFAMILY SSF53649 312 512 2.36E-77 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 4.8E-245 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 Gene3D G3DSA:3.40.1450.10 79 299 1.1E-92 T 29-03-2018 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 SUPERFAMILY SSF64158 79 311 2.09E-83 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 5.3E-80 T 29-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 PIRSF PIRSF001492 1 514 9.5E-205 T 29-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 Pfam PF01676 Metalloenzyme superfamily 6 501 2.0E-79 T 29-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM474_RS17205 468fb842a01cadabb3bf767e25a4492f 515 Gene3D G3DSA:3.40.720.10 300 514 6.0E-41 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS07130 e7715807ed862924a61be829b819714d 585 Pfam PF02378 Phosphotransferase system, EIIC 246 508 1.4E-17 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM474_RS07130 e7715807ed862924a61be829b819714d 585 SUPERFAMILY SSF52794 121 218 3.31E-34 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM474_RS07130 e7715807ed862924a61be829b819714d 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 209 1.3E-17 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM474_RS07130 e7715807ed862924a61be829b819714d 585 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 3.5E-10 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM474_RS07130 e7715807ed862924a61be829b819714d 585 SUPERFAMILY SSF52794 2 97 7.32E-24 T 29-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AM474_RS07130 e7715807ed862924a61be829b819714d 585 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.7E-32 T 29-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 AM474_RS07130 e7715807ed862924a61be829b819714d 585 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 233 564 7.3E-134 T 29-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AM474_RS07130 e7715807ed862924a61be829b819714d 585 Gene3D G3DSA:3.40.50.2300 2 100 1.0E-23 T 29-03-2018 AM474_RS07130 e7715807ed862924a61be829b819714d 585 Gene3D G3DSA:3.40.50.2300 121 219 2.1E-38 T 29-03-2018 AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 SUPERFAMILY SSF46785 21 88 2.52E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 Gene3D G3DSA:1.10.10.10 5 82 3.1E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 Pfam PF09339 IclR helix-turn-helix domain 24 73 5.3E-7 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 SMART SM00346 21 111 0.0058 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 Pfam PF01614 Bacterial transcriptional regulator 140 254 6.9E-7 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 SUPERFAMILY SSF55781 98 262 3.53E-24 T 29-03-2018 IPR029016 GAF domain-like AM474_RS00375 154d3c22b4a79a28967d06cc942dc79c 264 Gene3D G3DSA:3.30.450.40 87 264 3.5E-27 T 29-03-2018 IPR029016 GAF domain-like AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 Gene3D G3DSA:3.30.465.10 76 188 7.8E-21 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 Pfam PF04030 D-arabinono-1,4-lactone oxidase 186 436 2.5E-68 T 29-03-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 SUPERFAMILY SSF56176 15 189 1.03E-40 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 Pfam PF01565 FAD binding domain 36 161 1.2E-22 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 Gene3D G3DSA:3.40.462.10 189 407 2.7E-21 T 29-03-2018 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 Gene3D G3DSA:3.30.43.10 12 75 4.1E-11 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 PIRSF PIRSF000136 11 441 4.1E-90 T 29-03-2018 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase GO:0016899|GO:0055114 AM474_RS16175 372216c9cceb5f6bebf23731e8d2fd38 442 TIGRFAM TIGR01679 bact_FAD_ox: FAD-linked oxidoreductase 19 440 4.4E-141 T 29-03-2018 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Gene3D G3DSA:2.40.30.10 543 701 2.4E-19 T 29-03-2018 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00369 Flavodoxin signature 471 481 5.4E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00369 Flavodoxin signature 392 405 5.4E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00369 Flavodoxin signature 440 451 5.4E-6 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Gene3D G3DSA:3.40.50.360 365 538 1.5E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 682 691 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 579 589 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 786 802 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 654 661 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 718 737 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 809 817 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 742 751 3.6E-12 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 SUPERFAMILY SSF63380 539 709 1.95E-24 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 SUPERFAMILY SSF52218 388 531 4.4E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Pfam PF00175 Oxidoreductase NAD-binding domain 719 823 5.6E-11 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Pfam PF00258 Flavodoxin 393 522 3.7E-24 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Pfam PF03929 PepSY-associated TM region 6 366 2.9E-66 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS20815 2d99233313a2d9faf997386125679b54 850 Gene3D G3DSA:3.40.50.80 705 849 1.6E-25 T 29-03-2018 AM474_RS20815 2d99233313a2d9faf997386125679b54 850 SUPERFAMILY SSF52343 707 850 3.67E-36 T 29-03-2018 AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 Pfam PF13360 PQQ-like domain 82 339 9.2E-17 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 282 303 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 34 586 1.7E-238 T 29-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 Pfam PF01011 PQQ enzyme repeat 532 568 1.2E-10 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 Gene3D G3DSA:2.140.10.10 32 615 2.0E-110 T 29-03-2018 AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SUPERFAMILY SSF50998 46 609 4.32E-149 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 51 79 - T 29-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 452 517 540.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 147 178 1.1E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 192 235 200.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 361 397 470.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 527 558 6.8E-7 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS29225 2bcced3763db2e1c7cbc048625edff16 623 SMART SM00564 97 129 8.2E-8 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 Gene3D G3DSA:3.40.190.10 23 127 1.2E-10 T 29-03-2018 AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 SUPERFAMILY SSF53850 51 233 2.61E-41 T 29-03-2018 AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 29 285 1.6E-113 T 29-03-2018 IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 271 2.0E-68 T 29-03-2018 AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 SMART SM00062 28 257 0.0056 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 Gene3D G3DSA:3.40.190.10 128 267 1.7E-33 T 29-03-2018 AM474_RS05895 1f2f697c64bbe5d3bcb77cdbd48a5686 285 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 244 1.7E-77 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM474_RS22985 3ac260cbca636a621fef8a35d80b26ab 57 Pfam PF07235 Protein of unknown function (DUF1427) 2 53 2.3E-23 T 29-03-2018 IPR009872 Protein of unknown function DUF1427 AM474_RS22985 3ac260cbca636a621fef8a35d80b26ab 57 TIGRFAM TIGR03510 XapX: XapX domain 2 48 7.1E-21 T 29-03-2018 IPR020017 XapX domain AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 Gene3D G3DSA:3.40.50.300 230 402 5.0E-30 T 29-03-2018 AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 SUPERFAMILY SSF52540 234 448 1.01E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 SMART SM00382 265 398 4.4E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 269 395 4.8E-27 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 SUPERFAMILY SSF52540 41 214 1.4E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 Gene3D G3DSA:1.10.8.60 403 483 9.4E-9 T 29-03-2018 AM474_RS11360 2f8e9118f8fc5f9d3bd716ddc18480c6 493 Gene3D G3DSA:3.40.50.300 25 210 0.082 T 29-03-2018 AM474_RS04210 8813cc7ff2be53bff7b70d03e870c4b4 469 Pfam PF00324 Amino acid permease 19 457 4.0E-116 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS04210 8813cc7ff2be53bff7b70d03e870c4b4 469 PIRSF PIRSF006060 1 468 1.0E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS04210 8813cc7ff2be53bff7b70d03e870c4b4 469 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 Pfam PF12161 HsdM N-terminal domain 13 140 2.0E-21 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 Pfam PF02384 N-6 DNA Methylase 152 457 4.9E-89 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 279 285 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 SUPERFAMILY SSF53335 11 500 1.08E-122 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 Gene3D G3DSA:3.40.50.150 173 455 7.9E-59 T 29-03-2018 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 1.0E-16 T 29-03-2018 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 288 1.0E-16 T 29-03-2018 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 199 213 1.0E-16 T 29-03-2018 AM474_RS01580 c82b9ee3df500aba36158b90f61ae35e 507 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 1.0E-16 T 29-03-2018 AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 Pfam PF00271 Helicase conserved C-terminal domain 263 356 7.0E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 SUPERFAMILY SSF52540 25 159 4.27E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 SUPERFAMILY SSF52540 230 360 4.27E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 Pfam PF13401 AAA domain 26 157 6.8E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 Gene3D G3DSA:3.40.50.300 2 169 1.5E-15 T 29-03-2018 AM474_RS01705 6bb8d656d3b7e7d5cb58a834498a3a2e 466 Gene3D G3DSA:3.40.50.300 250 406 5.5E-15 T 29-03-2018 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 SUPERFAMILY SSF103388 26 293 3.79E-99 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 108 128 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 250 269 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 30 55 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 87 105 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 206 226 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 156 179 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 131 153 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 228 249 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 PRINTS PR01592 Low calcium response V antigen signature 269 291 1.2E-69 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS27750 5336ba127a49dbade4ba5a21ea0ec112 294 Pfam PF04792 V antigen (LcrV) protein 74 294 2.2E-68 T 29-03-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 Gene3D G3DSA:3.30.1310.10 1 108 7.0E-44 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 PIRSF PIRSF004555 2 108 8.5E-38 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 SUPERFAMILY SSF82607 10 102 5.89E-36 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 9.4E-35 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 1.4E-33 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS26795 6ba06b9950648442ad3eb38e5d453384 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.277 T 29-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM474_RS16270 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF46785 10 69 1.56E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16270 5b105919850375226c4956c483327c26 162 SUPERFAMILY SSF54909 73 159 3.35E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS16270 5b105919850375226c4956c483327c26 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 1.6E-19 T 29-03-2018 AM474_RS16270 5b105919850375226c4956c483327c26 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.0E-20 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS16270 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:3.30.70.920 64 157 3.1E-24 T 29-03-2018 AM474_RS16270 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.3E-20 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS16270 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.3E-20 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS16270 5b105919850375226c4956c483327c26 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.3E-20 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS16270 5b105919850375226c4956c483327c26 162 Gene3D G3DSA:1.10.10.10 12 63 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16270 5b105919850375226c4956c483327c26 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM474_RS16270 5b105919850375226c4956c483327c26 162 SMART SM00344 11 120 5.9E-48 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SMART SM00388 305 370 2.2E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SMART SM00448 663 776 4.1E-41 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SUPERFAMILY SSF52172 542 645 1.46E-6 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SUPERFAMILY SSF55874 359 528 2.36E-48 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 480 1.3E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 1.3E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.3E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 1.3E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 306 370 1.1E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Gene3D G3DSA:3.30.565.10 374 532 2.3E-49 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SUPERFAMILY SSF52172 662 781 3.98E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Gene3D G3DSA:1.20.1600.10 8 301 2.5E-4 T 29-03-2018 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Gene3D G3DSA:1.10.287.130 302 366 8.2E-16 T 29-03-2018 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SUPERFAMILY SSF47384 290 371 1.04E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Gene3D G3DSA:3.40.50.2300 656 784 6.6E-45 T 29-03-2018 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Gene3D G3DSA:3.40.50.2300 578 649 0.076 T 29-03-2018 AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 526 1.3E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 SMART SM00387 416 527 8.2E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03300 511bf48f7cf8e2ace16ea43a797e1b57 786 Pfam PF00072 Response regulator receiver domain 665 776 1.7E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS17495 3a8404d75836b0c609fd317a4130d84d 320 Gene3D G3DSA:1.10.3720.10 8 320 8.7E-55 T 29-03-2018 AM474_RS17495 3a8404d75836b0c609fd317a4130d84d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 316 3.3E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17495 3a8404d75836b0c609fd317a4130d84d 320 SUPERFAMILY SSF161098 117 302 7.85E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17495 3a8404d75836b0c609fd317a4130d84d 320 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 117 211 7.2E-27 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 SUPERFAMILY SSF50998 427 511 1.41E-21 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 SUPERFAMILY SSF50998 19 121 1.41E-21 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 SUPERFAMILY SSF50998 207 262 1.41E-21 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 Gene3D G3DSA:2.130.10.10 10 179 7.1E-10 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 Gene3D G3DSA:2.120.10.30 207 433 1.3E-4 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS26195 aa0c05d72a83b724df166cd1b08af1e9 529 Gene3D G3DSA:2.130.10.10 434 523 5.1E-10 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS24230 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF11862 Domain of unknown function (DUF3382) 3 105 7.9E-20 T 29-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM474_RS24230 5ce1a30d745d10897cafffc27b2c1716 417 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 398 1.1E-51 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS24230 5ce1a30d745d10897cafffc27b2c1716 417 Gene3D G3DSA:1.10.3470.10 89 403 1.9E-41 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 SUPERFAMILY SSF55347 178 487 3.6E-116 T 29-03-2018 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 190 486 3.8E-119 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 SUPERFAMILY SSF51735 5 191 4.13E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 488 82.424 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 Gene3D G3DSA:3.40.50.720 7 189 3.6E-60 T 29-03-2018 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PIRSF PIRSF000110 2 488 2.7E-172 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 486 2.4E-174 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 188 1.5E-54 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 6.5E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 6.5E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 6.5E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 6.5E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 6.5E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS15565 c86dd2e5fe49465f357b6d53c86e23c1 488 Gene3D G3DSA:3.30.360.10 190 488 1.9E-131 T 29-03-2018 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 486 1.7E-13 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 20 37 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 2.3E-29 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:3.30.9.10 198 330 4.8E-36 T 29-03-2018 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:3.30.9.10 93 197 5.1E-21 T 29-03-2018 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 SUPERFAMILY SSF51905 15 306 7.93E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Pfam PF01266 FAD dependent oxidoreductase 16 369 3.5E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 Gene3D G3DSA:3.40.50.720 14 66 6.8E-6 T 29-03-2018 AM474_RS07270 cd2b91cfa8812cf1ab0a2378c6e35ae9 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 29-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 Pfam PF01144 Coenzyme A transferase 6 201 2.1E-41 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.9E-98 T 29-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 Gene3D G3DSA:3.40.1080.10 3 214 4.7E-64 T 29-03-2018 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 SUPERFAMILY SSF100950 4 216 2.86E-74 T 29-03-2018 AM474_RS29315 2626d173a60542eb603bacf3a3c9bac0 218 SMART SM00882 6 202 1.0E-71 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS10905 71aec11231bb4f3cf77a4bafbddbac18 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 17 162 2.0E-83 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS10905 71aec11231bb4f3cf77a4bafbddbac18 162 Gene3D G3DSA:3.10.450.50 14 152 1.4E-15 T 29-03-2018 AM474_RS10905 71aec11231bb4f3cf77a4bafbddbac18 162 SUPERFAMILY SSF54427 20 149 6.18E-25 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS10905 71aec11231bb4f3cf77a4bafbddbac18 162 Pfam PF03284 Phenazine biosynthesis protein A/B 14 162 1.5E-85 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS04000 8f8a4d1fd04e7227af180edbfabf906b 118 Gene3D G3DSA:2.40.10.220 32 113 2.0E-9 T 29-03-2018 AM474_RS04000 8f8a4d1fd04e7227af180edbfabf906b 118 Pfam PF07238 PilZ domain 17 106 2.4E-13 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 Gene3D G3DSA:1.20.1600.10 18 472 8.4E-118 T 29-03-2018 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 SUPERFAMILY SSF56954 57 468 1.26E-120 T 29-03-2018 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 SUPERFAMILY SSF56954 1 30 1.26E-120 T 29-03-2018 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 66 256 7.8E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 Pfam PF02321 Outer membrane efflux protein 284 464 4.2E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS12565 06ca28c3693c98048920910b0f18fa9d 485 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 466 7.5E-173 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 SUPERFAMILY SSF56014 133 287 4.06E-20 T 29-03-2018 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Gene3D G3DSA:3.90.480.10 220 374 1.3E-23 T 29-03-2018 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 SUPERFAMILY SSF56014 381 476 2.22E-11 T 29-03-2018 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Gene3D G3DSA:3.30.413.10 378 476 3.8E-10 T 29-03-2018 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 45 442 4.8E-111 T 29-03-2018 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 SUPERFAMILY SSF55124 38 123 2.29E-16 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Gene3D G3DSA:3.90.480.10 62 204 6.7E-19 T 29-03-2018 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 SUPERFAMILY SSF55124 245 372 2.13E-23 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 132 274 4.0E-14 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 302 361 3.9E-15 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS03715 38e37414cfa524dfe87129fa6d39461f 486 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 62 118 1.3E-10 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Gene3D G3DSA:3.30.300.20 202 304 5.6E-42 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Gene3D G3DSA:3.40.50.300 65 201 2.1E-19 T 29-03-2018 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 175 2.4E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 TIGRFAM TIGR00436 era: GTP-binding protein Era 15 285 4.5E-100 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 SUPERFAMILY SSF52540 17 210 8.83E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Hamap MF_00367 GTPase Era [era]. 12 302 36.228 T 29-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 SUPERFAMILY SSF54814 188 302 3.92E-42 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Pfam PF01926 50S ribosome-binding GTPase 17 131 1.5E-23 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 17 37 2.3E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 66 81 2.3E-6 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Pfam PF07650 KH domain 215 290 9.8E-21 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS22500 02d71d074e42a0534186864c05d50273 305 Gene3D G3DSA:3.40.50.300 11 64 3.9E-13 T 29-03-2018 AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.7E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 Gene3D G3DSA:3.40.190.10 91 177 1.6E-12 T 29-03-2018 AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 Gene3D G3DSA:3.40.190.10 178 264 3.3E-19 T 29-03-2018 AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 SUPERFAMILY SSF53850 90 296 1.28E-38 T 29-03-2018 AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 Gene3D G3DSA:1.10.10.10 3 84 1.1E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 SUPERFAMILY SSF46785 4 111 1.75E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14170 dc3a92863193fe0b004e4d7778cc3dd3 302 Pfam PF03466 LysR substrate binding domain 88 293 6.6E-41 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS15360 f6138226c776c015f3a9124c99e1de82 346 Pfam PF11141 Protein of unknown function (DUF2914) 279 344 2.6E-24 T 29-03-2018 IPR022606 Protein of unknown function DUF2914 AM474_RS15360 f6138226c776c015f3a9124c99e1de82 346 PIRSF PIRSF029727 1 346 5.1E-182 T 29-03-2018 IPR016937 Uncharacterised conserved protein UCP029727 AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 444 2.7E-97 T 29-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 383 461 1.0E-18 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 SUPERFAMILY SSF117143 80 257 3.66E-76 T 29-03-2018 AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 SUPERFAMILY SSF117143 300 423 3.66E-76 T 29-03-2018 AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Gene3D G3DSA:2.60.98.20 150 344 1.1E-30 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF00460 Flagella basal body rod protein 3 33 2.7E-7 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM474_RS24275 7b7c14a3ff4ef66e4d8ed7e3863fde9a 462 Pfam PF07559 Flagellar basal body protein FlaE 176 343 2.9E-27 T 29-03-2018 IPR011491 Flagellar hook protein FlgE AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 Gene3D G3DSA:1.10.1040.10 178 295 3.1E-27 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 SUPERFAMILY SSF48179 168 292 2.15E-27 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 7.8E-26 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 PIRSF PIRSF000103 4 296 1.2E-68 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 SUPERFAMILY SSF51735 8 168 4.7E-41 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 Gene3D G3DSA:3.40.50.720 6 177 1.5E-32 T 29-03-2018 AM474_RS05890 b3d85fda08da10fb62d01c7f889c3d72 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 1.8E-46 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS02490 12df4bd6af1551ebb8dbbd012f861a64 141 Pfam PF00583 Acetyltransferase (GNAT) family 40 118 3.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS02490 12df4bd6af1551ebb8dbbd012f861a64 141 Gene3D G3DSA:3.40.630.30 35 140 1.7E-19 T 29-03-2018 AM474_RS02490 12df4bd6af1551ebb8dbbd012f861a64 141 SUPERFAMILY SSF55729 36 140 2.87E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS20505 afffc16d668532bfbdd991c41758b044 103 SUPERFAMILY SSF141091 1 102 9.03E-39 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20505 afffc16d668532bfbdd991c41758b044 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.0E-40 T 29-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20505 afffc16d668532bfbdd991c41758b044 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.193 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20505 afffc16d668532bfbdd991c41758b044 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 7.6E-43 T 29-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20505 afffc16d668532bfbdd991c41758b044 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 29-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.1700.10 128 298 2.7E-70 T 29-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 47.077 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 Gene3D G3DSA:3.30.230.20 1 127 9.9E-51 T 29-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 7.5E-122 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 3 124 6.98E-43 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 SUPERFAMILY SSF54211 134 277 1.82E-52 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS21360 4c5afba7d803b5dbd2d90ff6fdb78903 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 4.1E-109 T 29-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 Pfam PF13487 HD domain 263 322 1.8E-17 T 29-03-2018 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 SUPERFAMILY SSF52172 15 179 3.42E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 Gene3D G3DSA:3.40.50.2300 7 174 4.3E-35 T 29-03-2018 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 SUPERFAMILY SSF109604 226 377 1.33E-11 T 29-03-2018 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 Gene3D G3DSA:1.10.3210.10 194 384 3.3E-14 T 29-03-2018 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 SMART SM00448 15 127 3.0E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00170 5bc98de1e7eea8f5809436acbe47e7f9 447 Pfam PF00072 Response regulator receiver domain 17 126 8.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 Pfam PF08448 PAS fold 28 130 7.0E-6 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 198 2.5E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 SMART SM00421 151 208 4.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 Gene3D G3DSA:1.10.10.10 36 214 2.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 SUPERFAMILY SSF46894 145 212 6.46E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.0E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.0E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS25810 e8e1c7ef37af7a85c7bb683764af5a07 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.0E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS16320 d2887c4f4dfad3fd22b1a7a98f6def17 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.026 T 29-03-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 AM474_RS16320 d2887c4f4dfad3fd22b1a7a98f6def17 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 188 1.3E-83 T 29-03-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 AM474_RS16320 d2887c4f4dfad3fd22b1a7a98f6def17 190 SUPERFAMILY SSF53271 2 188 1.08E-45 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS16320 d2887c4f4dfad3fd22b1a7a98f6def17 190 Gene3D G3DSA:3.40.50.2020 3 188 2.1E-24 T 29-03-2018 AM474_RS16320 d2887c4f4dfad3fd22b1a7a98f6def17 190 Pfam PF00156 Phosphoribosyl transferase domain 31 156 5.9E-8 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 Gene3D G3DSA:3.20.20.450 289 542 6.9E-97 T 29-03-2018 IPR001633 EAL domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 SUPERFAMILY SSF55073 129 284 1.65E-36 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 Gene3D G3DSA:3.30.70.270 118 288 7.9E-45 T 29-03-2018 AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 SUPERFAMILY SSF141868 298 543 1.18E-87 T 29-03-2018 IPR001633 EAL domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 Pfam PF00563 EAL domain 298 533 2.4E-73 T 29-03-2018 IPR001633 EAL domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 120 275 7.1E-20 T 29-03-2018 IPR000160 GGDEF domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 274 5.1E-32 T 29-03-2018 IPR000160 GGDEF domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 SMART SM00267 113 282 9.8E-39 T 29-03-2018 IPR000160 GGDEF domain AM474_RS16335 2b5f3ac96193cb62ec75c46efc310d57 558 SMART SM00052 292 538 7.1E-110 T 29-03-2018 IPR001633 EAL domain AM474_RS27170 af757487cbeffdede029b57458622624 260 Gene3D G3DSA:2.60.120.10 5 105 9.8E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS27170 af757487cbeffdede029b57458622624 260 Pfam PF02311 AraC-like ligand binding domain 30 92 1.8E-6 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS27170 af757487cbeffdede029b57458622624 260 Gene3D G3DSA:1.10.10.60 153 211 3.7E-12 T 29-03-2018 AM474_RS27170 af757487cbeffdede029b57458622624 260 Gene3D G3DSA:1.10.10.60 212 260 1.4E-9 T 29-03-2018 AM474_RS27170 af757487cbeffdede029b57458622624 260 SUPERFAMILY SSF51182 5 180 5.93E-18 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS27170 af757487cbeffdede029b57458622624 260 Pfam PF12833 Helix-turn-helix domain 177 254 1.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27170 af757487cbeffdede029b57458622624 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS27170 af757487cbeffdede029b57458622624 260 SUPERFAMILY SSF46689 207 256 2.11E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27170 af757487cbeffdede029b57458622624 260 SMART SM00342 171 253 5.2E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27170 af757487cbeffdede029b57458622624 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 5.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS27170 af757487cbeffdede029b57458622624 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 5.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.436 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 SUPERFAMILY SSF54919 1 140 6.29E-59 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 SMART SM00562 3 140 1.8E-91 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.8E-41 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.8E-41 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.8E-41 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.8E-41 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.8E-41 T 29-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 Gene3D G3DSA:3.30.70.141 1 55 4.7E-18 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 Gene3D G3DSA:3.30.70.141 56 140 2.2E-36 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 29-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS08735 1a9506468d2b48dad3c71056d6f65686 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 5.3E-58 T 29-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Gene3D G3DSA:3.30.450.20 29 161 1.6E-20 T 29-03-2018 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Pfam PF00672 HAMP domain 299 348 1.0E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 SMART SM00283 367 628 7.2E-96 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Pfam PF02743 Cache domain 38 260 4.1E-31 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 SMART SM00304 298 352 7.6E-15 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 SMART SM00304 387 447 18.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Gene3D G3DSA:1.10.287.950 296 400 7.3E-7 T 29-03-2018 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Gene3D G3DSA:1.10.287.950 401 629 9.6E-51 T 29-03-2018 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 594 1.0E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 Gene3D G3DSA:3.30.450.20 162 277 2.0E-28 T 29-03-2018 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 SUPERFAMILY SSF58104 320 629 8.63E-76 T 29-03-2018 AM474_RS21865 68398316a4ad5f710e4e39ecd972bef6 629 SUPERFAMILY SSF103190 84 184 3.92E-10 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 SUPERFAMILY SSF160246 17 81 2.43E-14 T 29-03-2018 AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 Gene3D G3DSA:3.30.450.90 96 227 9.3E-49 T 29-03-2018 AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 322 336 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 17 499 9.0E-217 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 SUPERFAMILY SSF52540 112 499 9.46E-106 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 Gene3D G3DSA:3.40.50.300 228 502 6.7E-62 T 29-03-2018 AM474_RS04750 3f608b07226f9d6d91c88b73f49dc89a 502 Pfam PF00437 Type II/IV secretion system protein 129 394 1.3E-92 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 SUPERFAMILY SSF51215 22 153 6.54E-22 T 29-03-2018 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 Gene3D G3DSA:1.10.10.60 121 228 3.8E-15 T 29-03-2018 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 SUPERFAMILY SSF46689 176 223 6.99E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 SUPERFAMILY SSF46689 225 274 5.38E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 Gene3D G3DSA:1.10.10.60 229 274 1.7E-12 T 29-03-2018 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 Pfam PF02311 AraC-like ligand binding domain 12 150 4.6E-27 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 7.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 7.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 Pfam PF12833 Helix-turn-helix domain 195 274 5.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 SMART SM00342 189 272 8.0E-28 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 Gene3D G3DSA:2.60.120.10 13 120 5.4E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS27270 64d594bb049e51f8573197e095f1f8f3 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS31730 11a2a67b3f4c001830ce81ea69b1b29d 304 PIRSF PIRSF028756 12 304 5.4E-138 T 29-03-2018 IPR016898 Polyphosphate kinase 2 AM474_RS31730 11a2a67b3f4c001830ce81ea69b1b29d 304 SUPERFAMILY SSF52540 80 268 3.32E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31730 11a2a67b3f4c001830ce81ea69b1b29d 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 49 274 1.2E-116 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related AM474_RS31730 11a2a67b3f4c001830ce81ea69b1b29d 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 49 274 4.5E-116 T 29-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AM474_RS31730 11a2a67b3f4c001830ce81ea69b1b29d 304 Gene3D G3DSA:3.40.50.300 5 294 3.1E-115 T 29-03-2018 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 Gene3D G3DSA:3.30.565.10 302 449 1.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 287 1.2E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SUPERFAMILY SSF47384 205 287 3.53E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SMART SM00387 336 447 4.9E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SUPERFAMILY SSF158472 169 219 6.67E-8 T 29-03-2018 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 444 1.2E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 399 7.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 7.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 7.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 7.1E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SMART SM00304 169 221 1.4E-13 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 Pfam PF00672 HAMP domain 173 218 8.1E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 Gene3D G3DSA:1.10.287.130 212 283 1.3E-11 T 29-03-2018 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SMART SM00388 222 287 2.2E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24730 b1635235d245339039ab38ed258cdc20 452 SUPERFAMILY SSF55874 276 445 2.1E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 SUPERFAMILY SSF160544 238 343 1.44E-31 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 Gene3D G3DSA:3.40.1690.10 212 347 3.8E-48 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 3.9E-142 T 29-03-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 Pfam PF01312 FlhB HrpN YscU SpaS Family 4 340 2.4E-110 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 8.4E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 8.4E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 8.4E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 8.4E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS27670 69f2e74ee303c40d95ada0d82a1d8dcb 349 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 8.4E-43 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:1.20.1640.10 820 1039 2.4E-39 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82866 814 1039 1.19E-58 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82693 155 191 8.72E-21 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82693 277 333 8.72E-21 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1046 0.0 T 29-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:3.30.70.1430 42 135 4.0E-25 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Pfam PF00873 AcrB/AcrD/AcrF family 5 1035 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82693 579 668 1.78E-6 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82714 726 817 3.79E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:3.30.2090.10 190 277 2.0E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:3.30.2090.10 725 818 2.5E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82866 299 506 2.62E-34 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:1.20.1640.10 293 518 8.6E-35 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.5E-20 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 Gene3D G3DSA:3.30.70.1430 568 670 5.6E-12 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82693 42 127 5.49E-24 T 29-03-2018 AM474_RS32260 f307eeb840a1f6e29726f2b8b8ddfc30 1051 SUPERFAMILY SSF82714 192 274 9.29E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS08940 90f6c597414239e750b4561e7f46008c 203 Gene3D G3DSA:1.20.1050.10 89 202 6.0E-11 T 29-03-2018 AM474_RS08940 90f6c597414239e750b4561e7f46008c 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.5E-20 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS08940 90f6c597414239e750b4561e7f46008c 203 SUPERFAMILY SSF52833 1 95 2.79E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08940 90f6c597414239e750b4561e7f46008c 203 Gene3D G3DSA:3.40.30.10 1 88 4.7E-18 T 29-03-2018 AM474_RS08940 90f6c597414239e750b4561e7f46008c 203 SUPERFAMILY SSF47616 69 200 3.08E-8 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 6 24 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 80 94 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 24 35 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 51 66 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 35 51 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 PRINTS PR00946 Mercury scavenger protein signature 66 80 3.1E-40 T 29-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 SUPERFAMILY SSF55008 21 93 3.4E-21 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 ProSitePatterns PS01047 Heavy-metal-associated domain. 32 61 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 5 95 2.8E-45 T 29-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 Pfam PF00403 Heavy-metal-associated domain 29 89 1.6E-15 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02895 cb5205d98947b298ee31e9331525692a 95 Gene3D G3DSA:3.30.70.100 24 95 4.2E-23 T 29-03-2018 AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 Pfam PF00582 Universal stress protein family 1 129 3.5E-31 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 Pfam PF00582 Universal stress protein family 139 282 5.3E-23 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 Gene3D G3DSA:3.40.50.620 1 134 3.1E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 Gene3D G3DSA:3.40.50.620 135 286 4.3E-28 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 SUPERFAMILY SSF52402 139 284 3.43E-25 T 29-03-2018 AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 SUPERFAMILY SSF52402 1 129 1.59E-30 T 29-03-2018 AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 1 18 4.7E-12 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 92 104 4.7E-12 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS21645 cb1a17577243ca5e970b4aa19c9db57d 286 PRINTS PR01438 Universal stress protein signature 110 132 4.7E-12 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS28945 9a3652e2913357644839048497a0ef68 756 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 29-03-2018 IPR019938 YcaO domain protein AM474_RS28945 9a3652e2913357644839048497a0ef68 756 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 3.6E-95 T 29-03-2018 IPR003776 YcaO-like domain AM474_RS28945 9a3652e2913357644839048497a0ef68 756 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.9E-70 T 29-03-2018 IPR003776 YcaO-like domain AM474_RS28945 9a3652e2913357644839048497a0ef68 756 Gene3D G3DSA:3.30.300.20 1 134 2.6E-15 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS28945 9a3652e2913357644839048497a0ef68 756 Pfam PF02566 OsmC-like protein 32 126 6.0E-10 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS28945 9a3652e2913357644839048497a0ef68 756 SUPERFAMILY SSF82784 2 127 4.32E-20 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 702 710 - T 29-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 SMART SM00382 375 520 3.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 379 517 1.6E-22 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Gene3D G3DSA:2.30.130.40 23 142 1.7E-15 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 748 1.6E-47 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 620 636 1.6E-47 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 383 402 1.6E-47 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 752 770 1.6E-47 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 1.6E-47 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 32 227 3.6E-25 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Gene3D G3DSA:3.30.230.10 614 798 1.3E-57 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Gene3D G3DSA:1.10.8.60 519 611 1.0E-29 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 TIGRFAM TIGR00763 lon: endopeptidase La 34 797 1.4E-277 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Gene3D G3DSA:1.10.4060.10 145 237 1.4E-11 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 597 797 4.1E-79 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Gene3D G3DSA:3.40.50.300 340 518 1.9E-31 T 29-03-2018 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 SUPERFAMILY SSF52540 337 614 1.01E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 PIRSF PIRSF001174 21 799 2.3E-273 T 29-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 SUPERFAMILY SSF88697 32 227 6.46E-19 T 29-03-2018 IPR015947 PUA-like domain AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 SMART SM00464 31 228 8.5E-23 T 29-03-2018 IPR003111 Lon, substrate-binding domain AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 Hamap MF_01973 Lon protease [lon]. 32 798 59.927 T 29-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM474_RS22540 d997468f8d08fb351e59ed9f2edc8f71 799 SUPERFAMILY SSF54211 620 797 5.31E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS22670 0e4223877254566a79a9d482472825c4 146 SUPERFAMILY SSF54593 15 145 5.24E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22670 0e4223877254566a79a9d482472825c4 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 139 1.4E-6 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS22670 0e4223877254566a79a9d482472825c4 146 Gene3D G3DSA:3.10.180.10 7 146 1.5E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 SMART SM00729 11 227 4.3E-57 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 SUPERFAMILY SSF102114 10 383 1.7E-106 T 29-03-2018 AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 Gene3D G3DSA:3.20.20.70 10 312 3.7E-45 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 13 346 1.6E-117 T 29-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 Pfam PF06969 HemN C-terminal domain 310 372 4.2E-13 T 29-03-2018 IPR010723 HemN, C-terminal AM474_RS12780 87567e5a53f6e1cb8dd4628da09b8cf0 384 Pfam PF04055 Radical SAM superfamily 16 182 5.1E-20 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 Pfam PF00561 alpha/beta hydrolase fold 30 251 1.4E-28 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 TIGRFAM TIGR02240 PHA_depoly_arom: poly(3-hydroxyalkanoate) depolymerase 4 279 7.2E-192 T 29-03-2018 IPR011942 Poly(3-hydroxyalkanoate) depolymerase AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 Gene3D G3DSA:3.40.50.1820 5 267 7.5E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 SUPERFAMILY SSF53474 3 267 9.4E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.9E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.9E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.9E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS17585 0dd70ae705fbbd14789ba267ebeb9280 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.9E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.50.10860 1 137 3.8E-45 T 29-03-2018 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 290 1.0E-8 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 SMART SM00839 138 339 1.9E-66 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 PIRSF PIRSF000188 1 341 1.4E-141 T 29-03-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 64 78 2.0E-11 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 280 291 2.0E-11 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 170 190 2.0E-11 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF51735 138 335 4.33E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 SUPERFAMILY SSF53223 2 134 7.68E-41 T 29-03-2018 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 129 5.9E-22 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06490 57dada7d741f4d4a5e5d7f1f047aad74 341 Gene3D G3DSA:3.40.50.720 138 330 5.5E-33 T 29-03-2018 AM474_RS25025 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 SMART SM00450 209 306 2.3E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25025 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Gene3D G3DSA:3.40.250.10 202 311 8.2E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25025 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Pfam PF00581 Rhodanese-like domain 209 302 1.6E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25025 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 SUPERFAMILY SSF52821 192 307 7.2E-20 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25025 8d242739cbbb7f7c05d89ba7bb3a9fb3 311 Pfam PF09335 SNARE associated Golgi protein 29 155 4.1E-14 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:1.10.287.130 273 344 1.2E-21 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SMART SM00304 191 243 1.4E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SMART SM00448 665 781 4.3E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF158472 191 240 1.27E-5 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF52172 663 786 5.12E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 348 5.9E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF47384 269 349 4.51E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 167 3.5E-20 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:3.30.565.10 352 514 1.7E-51 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:1.20.120.160 800 915 3.4E-13 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SMART SM00073 817 913 1.1E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Pfam PF01627 Hpt domain 826 907 5.3E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:3.30.450.20 29 115 1.4E-4 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SMART SM00387 395 511 3.4E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF55874 337 509 2.75E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 510 1.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SMART SM00388 283 348 4.0E-27 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:3.40.50.2300 515 610 8.0E-4 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Gene3D G3DSA:3.40.50.2300 658 798 1.4E-41 T 29-03-2018 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF47226 764 777 3.79E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 SUPERFAMILY SSF47226 806 901 3.79E-22 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 5.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 489 5.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 464 5.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 508 5.0E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS23350 79ef7ad4656273d56031125e80e0727f 925 Pfam PF00072 Response regulator receiver domain 668 781 1.1E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS08405 980c9d8db50c7dbef8678dacfe50a71b 199 Pfam PF10502 Signal peptidase, peptidase S26 51 195 2.5E-50 T 29-03-2018 IPR019533 Peptidase S26 AM474_RS08405 980c9d8db50c7dbef8678dacfe50a71b 199 Gene3D G3DSA:2.10.109.10 24 199 1.9E-10 T 29-03-2018 AM474_RS08405 980c9d8db50c7dbef8678dacfe50a71b 199 SUPERFAMILY SSF51306 74 194 5.75E-18 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS21800 5a284e8a732230a1522bccee43437fec 425 Gene3D G3DSA:3.40.50.880 26 318 9.9E-7 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21800 5a284e8a732230a1522bccee43437fec 425 Pfam PF14258 Domain of unknown function (DUF4350) 44 113 3.9E-13 T 29-03-2018 IPR025646 Domain of unknown function DUF4350 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:1.10.10.200 1 78 1.8E-29 T 29-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 Pfam PF01709 Transcriptional regulator 5 237 6.4E-94 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.288 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.70.980 83 178 2.7E-32 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 SUPERFAMILY SSF75625 3 246 3.79E-96 T 29-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 5.6E-102 T 29-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS23555 96bd86c41b7f9036d273a1e8368e7d84 248 Gene3D G3DSA:3.30.70.980 179 248 2.2E-13 T 29-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS22050 7eb91a99c92d7adbb589ec553e36abb6 201 SUPERFAMILY SSF52540 44 157 1.17E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22050 7eb91a99c92d7adbb589ec553e36abb6 201 Gene3D G3DSA:3.40.50.300 43 157 4.2E-28 T 29-03-2018 AM474_RS22050 7eb91a99c92d7adbb589ec553e36abb6 201 PIRSF PIRSF037290 1 199 4.4E-76 T 29-03-2018 IPR017166 Uncharacterised conserved protein UCP037290 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.0E-34 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 Gene3D G3DSA:3.30.70.60 1 100 4.3E-30 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 Pfam PF01250 Ribosomal protein S6 3 91 5.9E-27 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 SUPERFAMILY SSF54995 1 102 9.55E-37 T 29-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.601 T 29-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS18515 aad12833c84219f04c4381299e84a50b 139 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 29-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 SUPERFAMILY SSF158472 337 386 1.01E-9 T 29-03-2018 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 SMART SM00331 453 662 1.4E-9 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 SMART SM00304 337 389 4.0E-14 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 SUPERFAMILY SSF81606 448 659 4.71E-6 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 Gene3D G3DSA:3.60.40.10 404 663 1.7E-21 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 Gene3D G3DSA:3.30.450.20 163 303 1.2E-8 T 29-03-2018 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 466 663 1.1E-24 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS13910 90f74b460f27b804542047bd2148dcb2 663 Pfam PF00672 HAMP domain 337 386 1.1E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01310 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 6.2E-30 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM474_RS01310 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 29-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM474_RS01310 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 SUPERFAMILY SSF46785 5 146 3.37E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01310 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Gene3D G3DSA:1.10.10.10 1 153 1.1E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01310 1f01c947dbd8e7298d1cccb8d4d4c3ed 174 Pfam PF02082 Transcriptional regulator 4 85 3.4E-24 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 433 556 1.94E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:2.30.30.40 2260 2322 1.3E-17 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 1674 1782 4.19E-20 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 7 130 1.44E-23 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00448 2355 2468 2.9E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00260 2172 2322 2.0E-34 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 1014 1174 1.3E-16 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00073 862 959 1.8E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00073 1039 1134 0.51 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00073 1673 1770 6.4E-4 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00073 1526 1623 0.011 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00073 1360 1457 4.1E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2043 2179 5.8E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 862 987 6.8E-27 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 1041 1127 3.5E-11 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 10 98 3.5E-8 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 1362 1455 9.8E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 1675 1768 3.7E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 1528 1627 3.5E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01627 Hpt domain 864 951 9.6E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF55874 1996 2177 7.99E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.10.287.560 1858 1993 4.0E-11 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:3.30.565.10 1994 2183 3.2E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 859 998 4.2E-31 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 429 616 1.1E-15 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 1522 1657 4.2E-28 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 1356 1521 1.7E-27 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 6 147 4.3E-15 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 1177 1316 1.6E-12 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:1.20.120.160 1669 1857 1.9E-21 T 29-03-2018 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 1526 1648 1.28E-26 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2140 2158 1.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2084 2098 1.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2164 2177 1.5E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF00072 Response regulator receiver domain 2357 2469 1.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM01231 1855 1994 1.3E-11 T 29-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Pfam PF01584 CheW-like domain 2185 2324 9.0E-23 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF50341 2179 2318 1.7E-21 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 1360 1482 3.14E-27 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 1039 1162 2.88E-19 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF52172 2354 2473 3.98E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SUPERFAMILY SSF47226 1182 1302 3.83E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 SMART SM00387 2039 2180 1.3E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12640 baa3c2cb29bd0d3f126624939a8e303a 2476 Gene3D G3DSA:3.40.50.2300 2346 2476 2.0E-36 T 29-03-2018 AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 SUPERFAMILY SSF50814 18 183 4.99E-46 T 29-03-2018 IPR012674 Calycin AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 Pfam PF08212 Lipocalin-like domain 34 179 6.4E-62 T 29-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 170 180 2.1E-10 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 143 154 2.1E-10 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 51 67 2.1E-10 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 PRINTS PR01171 Bacterial lipocalin signature 34 48 2.1E-10 T 29-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 ProSitePatterns PS00213 Lipocalin signature. 35 46 - T 29-03-2018 IPR022272 Lipocalin family conserved site AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 Gene3D G3DSA:2.40.128.20 5 183 1.6E-38 T 29-03-2018 IPR012674 Calycin AM474_RS17335 0f95ed7040b829ec4ec839b217c57b21 189 PIRSF PIRSF036893 4 189 1.0E-55 T 29-03-2018 IPR022271 Lipocalin, ApoD type AM474_RS31205 3a4d048732a42fbeb855563967272940 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 2.3E-13 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 SUPERFAMILY SSF53822 72 327 1.16E-52 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS31205 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:1.10.260.40 17 67 5.6E-19 T 29-03-2018 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 18 36 - T 29-03-2018 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:3.40.50.2300 68 188 1.6E-27 T 29-03-2018 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 Pfam PF13377 Periplasmic binding protein-like domain 182 343 1.3E-29 T 29-03-2018 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 SMART SM00354 15 85 2.1E-21 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 Gene3D G3DSA:3.40.50.2300 189 331 2.4E-36 T 29-03-2018 AM474_RS31205 3a4d048732a42fbeb855563967272940 343 SUPERFAMILY SSF47413 15 73 5.06E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:1.10.8.60 345 416 4.5E-29 T 29-03-2018 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 258 1.8E-52 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 232 1.8E-52 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 276 290 1.8E-52 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 472 491 1.8E-52 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 310 337 1.8E-52 T 29-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 SMART SM00382 211 420 2.3E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 SUPERFAMILY SSF48295 410 512 6.28E-37 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 513 34.157 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:1.10.1750.10 417 513 4.1E-35 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 SUPERFAMILY SSF52540 180 390 2.21E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF00308 Bacterial dnaA protein 179 396 9.5E-100 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 423 491 9.3E-32 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 ProSitePatterns PS01008 DnaA protein signature. 472 491 - T 29-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 SMART SM00760 422 491 9.1E-44 T 29-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Gene3D G3DSA:3.40.50.300 176 343 1.5E-20 T 29-03-2018 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 512 1.8E-187 T 29-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM474_RS14875 87a53b7e3ab3c9efc5c08392ae3c894f 514 Pfam PF11638 DnaA N-terminal domain 4 63 6.4E-21 T 29-03-2018 IPR024633 DnaA N-terminal domain AM474_RS22235 8c7ebebfc0e0b9dac18338abebe4bb25 259 Gene3D G3DSA:3.20.20.450 19 256 1.1E-9 T 29-03-2018 IPR001633 EAL domain AM474_RS22235 8c7ebebfc0e0b9dac18338abebe4bb25 259 SUPERFAMILY SSF141868 21 252 1.83E-6 T 29-03-2018 IPR001633 EAL domain AM474_RS22235 8c7ebebfc0e0b9dac18338abebe4bb25 259 Pfam PF00563 EAL domain 22 248 3.1E-11 T 29-03-2018 IPR001633 EAL domain AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 2.5E-73 T 29-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 Gene3D G3DSA:1.20.5.510 4 33 3.6E-14 T 29-03-2018 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 SUPERFAMILY SSF50022 30 190 1.52E-44 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 Gene3D G3DSA:2.102.10.10 34 197 5.9E-43 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 5.4E-12 T 29-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.2E-9 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 2.2E-9 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 2.2E-9 T 29-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM474_RS21230 2a5a290983f41318407d5891d4572cfc 197 Pfam PF00355 Rieske [2Fe-2S] domain 114 178 2.4E-10 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 Gene3D G3DSA:1.10.10.10 1 91 3.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 Pfam PF03466 LysR substrate binding domain 88 286 7.2E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 Gene3D G3DSA:3.40.190.10 177 256 3.0E-9 T 29-03-2018 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 Gene3D G3DSA:3.40.190.10 92 176 1.6E-15 T 29-03-2018 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 SUPERFAMILY SSF53850 89 290 2.17E-38 T 29-03-2018 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24615 e6709967fb40536d0e2c1a17beef8e41 291 SUPERFAMILY SSF46785 1 87 8.27E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Gene3D G3DSA:3.50.50.60 126 239 1.0E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 SUPERFAMILY SSF55424 315 403 1.65E-24 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Gene3D G3DSA:3.50.50.60 246 322 3.0E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 3.5E-19 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.5E-19 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 3.5E-19 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 3.5E-19 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Gene3D G3DSA:3.50.50.60 4 125 2.2E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Pfam PF14759 Reductase C-terminal 322 403 8.7E-25 T 29-03-2018 IPR028202 Reductase, C-terminal AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 SUPERFAMILY SSF51905 4 192 3.89E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Gene3D G3DSA:3.30.390.30 323 411 1.7E-23 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 SUPERFAMILY SSF51905 145 315 5.0E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 303 6.3E-66 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.2E-25 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.2E-25 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.2E-25 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.2E-25 T 29-03-2018 AM474_RS00420 c05c73981d8460805cbb42439ddb847e 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-25 T 29-03-2018 AM474_RS29740 b9238cfd9157cbe67ca63f961159049d 213 Pfam PF04199 Putative cyclase 8 152 2.1E-17 T 29-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM474_RS29740 b9238cfd9157cbe67ca63f961159049d 213 Hamap MF_01969 Kynurenine formamidase [kynB]. 5 209 45.28 T 29-03-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM474_RS29740 b9238cfd9157cbe67ca63f961159049d 213 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 209 3.6E-104 T 29-03-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AM474_RS29740 b9238cfd9157cbe67ca63f961159049d 213 SUPERFAMILY SSF102198 4 207 7.59E-60 T 29-03-2018 AM474_RS29740 b9238cfd9157cbe67ca63f961159049d 213 Gene3D G3DSA:3.50.30.50 2 210 3.6E-47 T 29-03-2018 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF46689 228 277 1.33E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF46689 280 330 3.94E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 Gene3D G3DSA:3.40.50.880 2 243 1.8E-61 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 SUPERFAMILY SSF52317 6 208 9.67E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 Gene3D G3DSA:1.10.10.60 284 333 4.2E-11 T 29-03-2018 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 SMART SM00342 244 327 8.9E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 Pfam PF12833 Helix-turn-helix domain 250 329 2.9E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 Pfam PF01965 DJ-1/PfpI family 7 188 1.6E-21 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS28540 e44c0d7e2b1da1b8437e7db55249df28 334 Gene3D G3DSA:1.10.10.60 244 283 3.0E-13 T 29-03-2018 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:1.10.10.10 2 89 9.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.6E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 Pfam PF03466 LysR substrate binding domain 95 301 1.0E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:3.40.190.10 93 184 7.5E-19 T 29-03-2018 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 SUPERFAMILY SSF46785 5 116 4.17E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 Gene3D G3DSA:3.40.190.10 185 269 5.3E-13 T 29-03-2018 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 SUPERFAMILY SSF53850 97 304 3.43E-33 T 29-03-2018 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14015 901207b68b5990cfe862639a0c73cc13 305 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 6 302 4.3E-115 T 29-03-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 AM474_RS26135 e8a9c8b74375d89b6a021c2629da7c3e 242 Gene3D G3DSA:3.60.15.10 3 236 4.1E-31 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS26135 e8a9c8b74375d89b6a021c2629da7c3e 242 SUPERFAMILY SSF56281 15 233 1.54E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS26135 e8a9c8b74375d89b6a021c2629da7c3e 242 Pfam PF00753 Metallo-beta-lactamase superfamily 29 220 5.7E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS26135 e8a9c8b74375d89b6a021c2629da7c3e 242 SMART SM00849 32 220 1.4E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS25120 936fa0ee105def645b25c0e860edf8c2 372 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 40 368 6.6E-99 T 29-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AM474_RS25120 936fa0ee105def645b25c0e860edf8c2 372 SUPERFAMILY SSF55909 34 369 1.3E-110 T 29-03-2018 AM474_RS25120 936fa0ee105def645b25c0e860edf8c2 372 Gene3D G3DSA:3.75.10.10 28 372 3.7E-110 T 29-03-2018 AM474_RS27005 7d20b397a898b8b9488925d1860e2370 117 Pfam PF01042 Endoribonuclease L-PSP 17 114 1.5E-21 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS27005 7d20b397a898b8b9488925d1860e2370 117 SUPERFAMILY SSF55298 14 116 9.42E-30 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS27005 7d20b397a898b8b9488925d1860e2370 117 Gene3D G3DSA:3.30.1330.40 2 117 2.5E-27 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.5E-5 T 29-03-2018 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 1.5E-5 T 29-03-2018 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.5E-5 T 29-03-2018 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1250.20 6 202 2.0E-32 T 29-03-2018 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 Gene3D G3DSA:1.20.1250.20 260 476 7.5E-24 T 29-03-2018 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 417 4.4E-78 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 Pfam PF07690 Major Facilitator Superfamily 20 410 2.3E-48 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 SUPERFAMILY SSF103473 4 197 2.22E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS12405 c05998734a8d4c819971c5fae68fab74 477 SUPERFAMILY SSF103473 249 467 2.22E-62 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 Pfam PF00675 Insulinase (Peptidase family M16) 36 149 4.1E-14 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 Pfam PF05193 Peptidase M16 inactive domain 193 359 1.4E-16 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 SUPERFAMILY SSF63411 255 418 2.93E-17 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 Gene3D G3DSA:3.30.830.10 19 243 2.2E-33 T 29-03-2018 AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 SUPERFAMILY SSF63411 24 229 5.98E-28 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS15380 d6ed793573c70a45aa5fd27a2a847cf4 457 Gene3D G3DSA:3.30.830.10 255 423 1.7E-19 T 29-03-2018 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 7.6E-149 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 93 115 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 214 233 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 186 204 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 353 375 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 412 432 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 PRINTS PR00175 Sodium/alanine symporter signature 309 327 1.8E-53 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32340 0ad5b71963577fb567266c0cc4ad6f7b 449 Pfam PF01235 Sodium:alanine symporter family 56 447 1.9E-141 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Gene3D G3DSA:3.40.190.10 178 263 4.5E-24 T 29-03-2018 AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Gene3D G3DSA:3.40.190.10 92 177 3.2E-16 T 29-03-2018 AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 SUPERFAMILY SSF46785 4 83 1.54E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 SUPERFAMILY SSF53850 89 297 1.03E-46 T 29-03-2018 AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Gene3D G3DSA:1.10.10.10 3 83 2.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32345 bde0f0e124bb4b1a1beb64f53d5c4e89 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.9E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00945 ca47877d37aab3ee5589634c9a30f103 122 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 39 117 1.2E-34 T 29-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AM474_RS00945 ca47877d37aab3ee5589634c9a30f103 122 SUPERFAMILY SSF54736 37 120 8.37E-33 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM474_RS00945 ca47877d37aab3ee5589634c9a30f103 122 Gene3D G3DSA:3.30.1390.10 28 120 1.3E-36 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM474_RS00945 ca47877d37aab3ee5589634c9a30f103 122 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 17 116 29.359 T 29-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AM474_RS31925 be247ed58b615529c1efe3b14d79da22 115 Gene3D G3DSA:3.30.370.10 16 101 4.4E-16 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS31925 be247ed58b615529c1efe3b14d79da22 115 Pfam PF01337 Barstar (barnase inhibitor) 22 90 1.0E-15 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS31925 be247ed58b615529c1efe3b14d79da22 115 SUPERFAMILY SSF52038 22 90 8.89E-15 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 Gene3D G3DSA:1.20.20.10 2 78 9.4E-13 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.4E-29 T 29-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.5E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.5E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.5E-6 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 SUPERFAMILY SSF81333 3 78 1.15E-18 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 Pfam PF00137 ATP synthase subunit C 10 72 3.7E-9 T 29-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 29-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14945 7bf68f8f528bc902ec655bdd00814742 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.112 T 29-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 521 4.0E-116 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 Gene3D G3DSA:1.20.58.220 323 440 7.9E-19 T 29-03-2018 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.8E-106 T 29-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 Pfam PF02690 Na+/Pi-cotransporter 13 147 2.0E-35 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 Pfam PF02690 Na+/Pi-cotransporter 158 258 1.2E-8 T 29-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 Pfam PF01895 PhoU domain 340 422 9.2E-12 T 29-03-2018 IPR026022 PhoU domain AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 Gene3D G3DSA:1.20.58.220 441 534 4.1E-8 T 29-03-2018 AM474_RS15385 092ab44c83d6da8b90c91689b3aa6e6b 582 SUPERFAMILY SSF109755 320 532 3.66E-35 T 29-03-2018 AM474_RS23295 4048b13093f9fc7bd5377e4996778487 427 Pfam PF06057 Bacterial virulence protein (VirJ) 232 421 2.1E-81 T 29-03-2018 IPR010333 Bacterial virulence AM474_RS23295 4048b13093f9fc7bd5377e4996778487 427 SUPERFAMILY SSF53474 220 407 2.39E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS23295 4048b13093f9fc7bd5377e4996778487 427 Gene3D G3DSA:3.40.50.1820 201 404 1.0E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS23295 4048b13093f9fc7bd5377e4996778487 427 PIRSF PIRSF029063 3 426 3.1E-155 T 29-03-2018 IPR011225 Type IV secretory pathway, VirJ component AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 SMART SM00448 1 119 1.3E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 SUPERFAMILY SSF52172 1 177 2.02E-31 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 Pfam PF00072 Response regulator receiver domain 3 119 7.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 Gene3D G3DSA:3.40.50.2300 1 131 2.6E-31 T 29-03-2018 AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 Gene3D G3DSA:1.10.10.10 132 237 6.8E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 SMART SM00862 155 231 4.1E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS10030 7a14a7e134010925009e9bc478ccbdeb 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 7.7E-19 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 SUPERFAMILY SSF54373 465 543 5.89E-6 T 29-03-2018 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 SUPERFAMILY SSF53335 9 110 4.49E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 SUPERFAMILY SSF53335 138 204 4.49E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 SUPERFAMILY SSF51905 259 464 8.03E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 SUPERFAMILY SSF51905 582 650 8.03E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 258 651 1.3E-135 T 29-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 Gene3D G3DSA:3.50.50.60 244 654 1.2E-42 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 233 4.2E-45 T 29-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 Pfam PF01266 FAD dependent oxidoreductase 259 622 4.5E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 Gene3D G3DSA:3.40.50.150 7 243 6.1E-80 T 29-03-2018 AM474_RS06685 87af952c1c4d7f5b4c195a08f088f0b4 654 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 646 27.15 T 29-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 Gene3D G3DSA:1.10.10.60 2 58 1.5E-14 T 29-03-2018 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 Gene3D G3DSA:1.10.357.10 59 195 4.7E-21 T 29-03-2018 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 SUPERFAMILY SSF46689 3 75 1.28E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 SUPERFAMILY SSF48498 80 191 2.45E-21 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.7E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.9E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS22860 45537a1588a2fad542490aec7f9550a8 196 Pfam PF16925 Bacterial transcriptional repressor C-terminal 80 189 2.9E-18 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 Gene3D G3DSA:3.10.180.10 161 357 4.4E-62 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 SUPERFAMILY SSF54593 8 344 1.59E-80 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 Gene3D G3DSA:3.10.180.10 6 160 6.0E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 10 149 2.1E-51 T 29-03-2018 AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 277 1.4E-16 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 17 356 2.3E-124 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AM474_RS22995 8712afc2fa35021fefe7743b07c1302c 357 PIRSF PIRSF009283 1 357 6.9E-121 T 29-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 Gene3D G3DSA:3.40.50.720 1 257 6.6E-51 T 29-03-2018 AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 3.2E-41 T 29-03-2018 AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.7E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23680 f8d8e7eaf461a10e8bf3f46835b63445 257 SUPERFAMILY SSF51735 4 256 6.67E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS24915 e48639bfeec48691831b77f8136087e5 781 SUPERFAMILY SSF52540 336 397 6.1E-5 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24915 e48639bfeec48691831b77f8136087e5 781 Pfam PF13289 SIR2-like domain 121 216 3.8E-10 T 29-03-2018 AM474_RS24915 e48639bfeec48691831b77f8136087e5 781 Gene3D G3DSA:3.40.50.300 331 609 1.7E-4 T 29-03-2018 AM474_RS01320 8176e45e90147f56ebdb01ca956d5fdc 108 SUPERFAMILY SSF52833 19 106 5.46E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS01320 8176e45e90147f56ebdb01ca956d5fdc 108 Gene3D G3DSA:3.40.30.10 1 108 2.3E-20 T 29-03-2018 AM474_RS01320 8176e45e90147f56ebdb01ca956d5fdc 108 Pfam PF00085 Thioredoxin 19 99 3.0E-14 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM474_RS19380 278614c580a89be5f19537a19bd50b73 560 Pfam PF02652 L-lactate permease 16 548 4.3E-204 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM474_RS19380 278614c580a89be5f19537a19bd50b73 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 552 8.5E-222 T 29-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 1.8E-12 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF00593 TonB dependent receptor 323 806 2.5E-61 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 SUPERFAMILY SSF56935 108 808 2.01E-133 T 29-03-2018 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 Gene3D G3DSA:2.170.130.10 104 258 7.8E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 SMART SM00965 55 105 1.2E-11 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 Gene3D G3DSA:2.40.170.20 264 808 8.0E-79 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 807 7.3E-118 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS31585 8fb9a727e271f41e1efea86fa21fb52c 808 Pfam PF07715 TonB-dependent Receptor Plug Domain 146 251 7.5E-22 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SMART SM00382 199 347 5.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SMART SM00382 539 713 4.7E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:1.10.1780.10 3 81 3.0E-12 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:3.40.50.300 494 711 4.7E-51 T 29-03-2018 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:1.10.8.60 346 489 2.1E-42 T 29-03-2018 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SUPERFAMILY SSF52540 488 799 1.32E-78 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 65 9.5E-8 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 144 4.7E-15 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 573 591 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SUPERFAMILY SSF81923 5 146 4.61E-27 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 712 791 6.5E-22 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:1.10.8.60 712 817 1.6E-20 T 29-03-2018 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SUPERFAMILY SSF52540 160 505 3.21E-77 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Pfam PF07724 AAA domain (Cdc48 subfamily) 538 706 4.6E-54 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:3.40.50.300 192 344 4.0E-20 T 29-03-2018 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 1.1E-15 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 Gene3D G3DSA:1.10.1780.10 82 191 4.5E-24 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 617 635 4.5E-40 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 588 606 4.5E-40 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 4.5E-40 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 664 4.5E-40 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS12395 dacf044c45667e22dd65aa599e05fa89 850 SMART SM01086 712 802 1.7E-24 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS01570 b99713340e79abde5d065255764ba007 558 SUPERFAMILY SSF52540 14 378 9.94E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01570 b99713340e79abde5d065255764ba007 558 SUPERFAMILY SSF52540 418 528 9.94E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01570 b99713340e79abde5d065255764ba007 558 Pfam PF13245 AAA domain 24 204 9.4E-21 T 29-03-2018 AM474_RS01570 b99713340e79abde5d065255764ba007 558 Pfam PF13361 UvrD-like helicase C-terminal domain 418 523 8.6E-15 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS01570 b99713340e79abde5d065255764ba007 558 Pfam PF13361 UvrD-like helicase C-terminal domain 228 375 4.2E-9 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS01570 b99713340e79abde5d065255764ba007 558 Gene3D G3DSA:3.40.50.300 228 542 7.2E-32 T 29-03-2018 AM474_RS01570 b99713340e79abde5d065255764ba007 558 Gene3D G3DSA:3.40.50.300 13 227 1.2E-34 T 29-03-2018 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 SUPERFAMILY SSF47203 229 377 1.16E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 5.4E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:2.40.110.10 121 216 6.3E-36 T 29-03-2018 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 SUPERFAMILY SSF56645 5 241 1.96E-79 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:1.20.140.10 217 377 3.4E-51 T 29-03-2018 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.1E-29 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Gene3D G3DSA:1.10.540.10 1 120 2.4E-33 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS24880 37c830e3ebc6bede3db6eee57369001a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 4.0E-24 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS20425 6d3268e9c38cc641ea51944e24809cc5 404 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 31 60 - T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS20425 6d3268e9c38cc641ea51944e24809cc5 404 SUPERFAMILY SSF103365 7 404 2.35E-141 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS20425 6d3268e9c38cc641ea51944e24809cc5 404 Pfam PF01139 tRNA-splicing ligase RtcB 31 404 8.3E-134 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Gene3D G3DSA:2.40.50.140 11 116 2.1E-10 T 29-03-2018 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Gene3D G3DSA:3.40.50.1970 117 252 0.001 T 29-03-2018 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 360 1.7E-131 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Pfam PF02601 Exonuclease VII, large subunit 132 443 7.0E-100 T 29-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Gene3D G3DSA:3.90.20.10 253 399 5.3E-4 T 29-03-2018 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Pfam PF13742 OB-fold nucleic acid binding domain 16 108 2.7E-28 T 29-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM474_RS08580 bc97d9ff6d041f596b3e6133b77d6ea9 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 446 31.882 T 29-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 Pfam PF00067 Cytochrome P450 197 379 2.1E-28 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 Gene3D G3DSA:1.10.630.10 3 408 6.2E-73 T 29-03-2018 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 149 165 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 299 326 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 327 342 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 202 224 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 103 114 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 359 370 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 166 181 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00359 B-class P450 signature 350 359 2.3E-36 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 352 361 - T 29-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00385 P450 superfamily signature 350 359 3.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00385 P450 superfamily signature 248 265 3.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00385 P450 superfamily signature 359 370 3.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 PRINTS PR00385 P450 superfamily signature 283 294 3.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00585 3f999dd2313924ed82433a6d87224b88 415 SUPERFAMILY SSF48264 13 408 8.77E-91 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Pfam PF13646 HEAT repeats 108 191 6.3E-12 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Pfam PF13646 HEAT repeats 231 315 1.5E-14 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Pfam PF13646 HEAT repeats 17 97 4.3E-13 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Pfam PF02985 HEAT repeat 198 224 1.3E-4 T 29-03-2018 IPR000357 HEAT repeat GO:0005515 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Gene3D G3DSA:1.25.10.10 244 318 4.1E-10 T 29-03-2018 IPR011989 Armadillo-like helical AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Gene3D G3DSA:1.25.40.70 3 67 1.2E-8 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Gene3D G3DSA:1.25.40.70 193 243 1.4E-15 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Gene3D G3DSA:1.25.40.70 131 192 3.3E-8 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 Gene3D G3DSA:1.25.40.70 68 130 1.2E-8 T 29-03-2018 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SUPERFAMILY SSF48371 60 310 5.76E-46 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 86 115 120.0 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 117 146 1.6 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 273 302 1.1 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 180 209 0.27 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 211 240 6.6E-8 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 23 52 0.5 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 242 271 1.3E-5 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 55 84 0.0023 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS31085 8c6829e61bb590e4b9c7753cbf5d1b5f 321 SMART SM00567 E-Z type HEAT repeats 148 177 4.5 T 29-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.826 T 29-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 337 2.4E-107 T 29-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 6.9E-109 T 29-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 6.7E-28 T 29-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF46589 13 99 1.46E-23 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 SUPERFAMILY SSF55681 92 338 2.68E-82 T 29-03-2018 AM474_RS01620 9194027d1cbbebbe905d90106f8975fd 338 Gene3D G3DSA:3.30.930.10 7 338 1.1E-93 T 29-03-2018 AM474_RS27545 4f17a17fcd284951786ef859f35c54dd 168 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 151 3.6E-42 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM474_RS27545 4f17a17fcd284951786ef859f35c54dd 168 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 10 154 1.2E-46 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 SMART SM00936 276 366 1.5E-32 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 255 1.1E-87 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 4.3E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 4.3E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 4.3E-18 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 Gene3D G3DSA:2.60.410.10 276 366 1.3E-22 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 276 366 1.6E-24 T 29-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 SUPERFAMILY SSF69189 276 368 8.04E-25 T 29-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 SUPERFAMILY SSF56601 8 276 3.04E-90 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS09865 7fcd2f8580bc51cb80272962c9039e66 386 Gene3D G3DSA:3.40.710.10 23 275 2.0E-53 T 29-03-2018 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 SUPERFAMILY SSF69287 1 72 6.93E-17 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 PIRSF PIRSF036402 1 151 2.0E-52 T 29-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 Pfam PF02814 UreE urease accessory protein, N-terminal domain 6 66 7.6E-21 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 Gene3D G3DSA:3.30.70.790 72 157 1.0E-33 T 29-03-2018 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 Gene3D G3DSA:2.60.260.20 1 71 8.7E-21 T 29-03-2018 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 SMART SM00988 1 66 2.9E-24 T 29-03-2018 IPR004029 UreE urease accessory, N-terminal AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 24.271 T 29-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 Pfam PF05194 UreE urease accessory protein, C-terminal domain 73 150 3.8E-28 T 29-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM474_RS18745 bb174f3c63d12d7f87426feed5ea1a31 167 SUPERFAMILY SSF69737 72 139 3.01E-22 T 29-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 AM474_RS15415 ac368145f9c2473979af290e61a6fac9 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 6.7E-190 T 29-03-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 AM474_RS15415 ac368145f9c2473979af290e61a6fac9 434 Pfam PF03600 Citrate transporter 13 377 7.1E-56 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM474_RS19745 a2e21dfa245a3b04ed227be50bd583df 90 Pfam PF04994 TfoX C-terminal domain 1 80 1.0E-27 T 29-03-2018 IPR007077 TfoX, C-terminal AM474_RS19745 a2e21dfa245a3b04ed227be50bd583df 90 Gene3D G3DSA:1.10.150.20 3 81 3.1E-19 T 29-03-2018 AM474_RS17340 c4fa08b84de68e3fecfa432e9f93a5ec 453 Pfam PF01979 Amidohydrolase family 48 428 4.4E-36 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS17340 c4fa08b84de68e3fecfa432e9f93a5ec 453 SUPERFAMILY SSF51556 50 374 5.73E-73 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS17340 c4fa08b84de68e3fecfa432e9f93a5ec 453 Gene3D G3DSA:3.20.20.140 52 394 2.7E-56 T 29-03-2018 AM474_RS17340 c4fa08b84de68e3fecfa432e9f93a5ec 453 SUPERFAMILY SSF51338 359 436 1.02E-13 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS17340 c4fa08b84de68e3fecfa432e9f93a5ec 453 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 452 1.4E-218 T 29-03-2018 IPR010252 Formiminoglutamate deiminase AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 SUPERFAMILY SSF50022 24 167 4.71E-44 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 Gene3D G3DSA:2.102.10.10 47 155 5.2E-23 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 40 65 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 91 111 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 85 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 112 132 1.8E-27 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 Pfam PF00355 Rieske [2Fe-2S] domain 56 131 1.6E-16 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 188 412 3.0E-46 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 SUPERFAMILY SSF55961 168 416 3.38E-53 T 29-03-2018 AM474_RS15725 f83954f74eb4c7683f2645ce7c221290 429 Gene3D G3DSA:3.90.380.10 156 426 1.2E-62 T 29-03-2018 AM474_RS28860 066f3b0cb2f474cfdb97e62f7d13e639 316 PIRSF PIRSF018266 5 316 3.2E-93 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS28860 066f3b0cb2f474cfdb97e62f7d13e639 316 Pfam PF04773 FecR protein 114 204 5.8E-20 T 29-03-2018 IPR006860 FecR protein AM474_RS28860 066f3b0cb2f474cfdb97e62f7d13e639 316 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 7.1E-15 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS15045 82f885fa095cfeee1daa8ebbeaf8f43e 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 6 289 1.2E-68 T 29-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM474_RS15045 82f885fa095cfeee1daa8ebbeaf8f43e 298 Gene3D G3DSA:3.10.270.10 5 292 6.7E-83 T 29-03-2018 AM474_RS15045 82f885fa095cfeee1daa8ebbeaf8f43e 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 6 294 32.625 T 29-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 SUPERFAMILY SSF53795 200 513 1.95E-126 T 29-03-2018 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 SUPERFAMILY SSF68923 5 199 9.42E-69 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 Gene3D G3DSA:3.40.449.10 8 198 2.3E-60 T 29-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 1 513 52.301 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 467 8.2E-188 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 29-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 PIRSF PIRSF006294 1 513 1.4E-206 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 Gene3D G3DSA:3.90.228.20 280 511 3.3E-85 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 Gene3D G3DSA:3.90.228.20 200 279 7.7E-27 T 29-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AM474_RS16875 e9f9d9548f8b628ed8b1625f6555edf5 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 8.3E-183 T 29-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.984 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 Pfam PF00920 Dehydratase family 34 603 2.1E-219 T 29-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 SUPERFAMILY SSF52016 419 606 1.33E-59 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 SUPERFAMILY SSF143975 3 418 2.35E-137 T 29-03-2018 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 29-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 5.1E-252 T 29-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AM474_RS12955 54167a1d134de0df3960476e03ccfc27 612 Gene3D G3DSA:3.40.50.2300 54 176 1.3E-5 T 29-03-2018 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 Gene3D G3DSA:1.10.10.60 46 96 2.9E-7 T 29-03-2018 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 SUPERFAMILY SSF46689 2 81 4.67E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 Gene3D G3DSA:1.10.10.60 2 45 5.9E-17 T 29-03-2018 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.3E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.8E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25480 c19e0cd83fdbd83d22c73c85fac4c8e8 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.8E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 SUPERFAMILY SSF52317 2 208 4.3E-55 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 34.329 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 Pfam PF00117 Glutamine amidotransferase class-I 6 206 1.1E-18 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 207 4.9E-66 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 PIRSF PIRSF000495 2 210 4.3E-66 T 29-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AM474_RS17145 48eb1d2e7b0257e239de8edb05b3472c 212 Gene3D G3DSA:3.40.50.880 1 211 5.5E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21910 6bd25359afd04701cdfa66fd80d4f83a 294 Pfam PF00482 Type II secretion system (T2SS), protein F 127 253 4.1E-16 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 466 5.3E-24 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 500 620 1.2E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF00512 His Kinase A (phospho-acceptor) domain 764 829 1.5E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00387 876 992 1.6E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF52172 1007 1135 1.71E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00073 1306 1397 9.1E-5 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00086 418 460 0.0089 T 29-03-2018 IPR001610 PAC motif AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00086 572 614 5.3E-6 T 29-03-2018 IPR001610 PAC motif AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00086 702 744 0.012 T 29-03-2018 IPR001610 PAC motif AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF03924 CHASE domain 80 263 1.3E-44 T 29-03-2018 IPR006189 CHASE domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF08447 PAS fold 649 738 6.2E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00388 764 829 2.1E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF55874 818 988 1.7E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00091 626 696 0.0018 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00091 491 559 6.2E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00091 345 411 9.3E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF00072 Response regulator receiver domain 1161 1270 5.5E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF00072 Response regulator receiver domain 1012 1129 1.2E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF55785 344 450 2.62E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF01627 Hpt domain 1315 1398 2.1E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF47226 1256 1380 6.02E-17 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.30.565.10 833 999 1.2E-44 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF55785 611 742 5.41E-19 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.30.450.20 622 763 4.3E-29 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM01079 77 267 1.2E-60 T 29-03-2018 IPR006189 CHASE domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.40.50.2300 1153 1288 2.6E-35 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:1.10.287.130 764 825 1.4E-18 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF55785 504 621 6.63E-19 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.30.450.20 476 621 2.4E-25 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.30.450.20 329 475 5.9E-29 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:3.40.50.2300 1005 1152 1.6E-28 T 29-03-2018 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF00989 PAS fold 346 457 1.5E-14 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00448 1009 1130 1.5E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SMART SM00448 1158 1273 3.9E-33 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF52172 1155 1279 7.68E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF13426 PAS domain 502 613 6.0E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 SUPERFAMILY SSF47384 748 830 2.55E-21 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 970 3.4E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 935 945 3.4E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 917 931 3.4E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 989 3.4E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 876 991 3.6E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10430 fbb775c8e4926ccb3141ab863742ffc3 1417 Gene3D G3DSA:1.20.120.160 1289 1417 2.2E-15 T 29-03-2018 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 2.7E-17 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 4.6E-15 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 SUPERFAMILY SSF55124 1 125 3.76E-30 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 SUPERFAMILY SSF56014 409 548 5.5E-38 T 29-03-2018 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Gene3D G3DSA:3.90.480.10 239 405 1.7E-24 T 29-03-2018 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 547 2.5E-10 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 5.7E-41 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Gene3D G3DSA:3.30.413.10 406 550 5.6E-32 T 29-03-2018 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 SUPERFAMILY SSF55124 315 421 1.39E-24 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 SUPERFAMILY SSF55124 252 276 1.39E-24 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 Gene3D G3DSA:3.30.413.10 120 238 2.3E-26 T 29-03-2018 AM474_RS28470 41fb8fd25eea77ff27839b9751d58b71 552 SUPERFAMILY SSF56014 120 285 5.37E-47 T 29-03-2018 AM474_RS29910 af328264a2f5f6a3ba34dd96d9212ded 370 Pfam PF11017 Protein of unknown function (DUF2855) 42 356 8.8E-107 T 29-03-2018 IPR021276 Protein of unknown function DUF2855 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 SUPERFAMILY SSF52402 233 394 3.45E-69 T 29-03-2018 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 SUPERFAMILY SSF52402 452 574 3.45E-69 T 29-03-2018 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 SUPERFAMILY SSF56235 1 224 1.54E-62 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 4.9E-149 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 Pfam PF00733 Asparagine synthase 243 580 1.1E-95 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 Pfam PF13537 Glutamine amidotransferase domain 48 167 1.3E-45 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 PIRSF PIRSF001589 1 609 8.3E-142 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 Gene3D G3DSA:3.40.50.620 226 580 1.0E-62 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS29755 165e27c3e0f935c5ca0cd086338892d2 610 Gene3D G3DSA:3.60.20.10 1 225 6.4E-55 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 PIRSF PIRSF006232 3 285 2.9E-97 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 Gene3D G3DSA:2.60.120.10 246 285 1.8E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 Gene3D G3DSA:2.60.120.10 1 245 4.7E-80 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 SUPERFAMILY SSF51182 7 281 1.85E-85 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 Pfam PF02678 Pirin 22 122 1.2E-37 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM474_RS05480 08774e98d416bf2b789f5d86d4484c2a 285 Pfam PF05726 Pirin C-terminal cupin domain 181 282 9.6E-33 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 SMART SM01374 1 122 4.5E-86 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 Gene3D G3DSA:2.40.150.20 1 122 2.1E-53 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.6E-55 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 SUPERFAMILY SSF50193 1 122 3.92E-52 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.771 T 29-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.6E-58 T 29-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM474_RS11120 0f172d6b2e1dfd324cd372b9538696e4 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 29-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 Gene3D G3DSA:3.40.50.720 1 163 1.2E-73 T 29-03-2018 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 SUPERFAMILY SSF51735 1 182 1.5E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.4E-127 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 Gene3D G3DSA:3.30.360.10 164 314 4.9E-62 T 29-03-2018 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.3E-35 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 3.3E-35 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.3E-35 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 3.3E-35 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 3.3E-35 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 PIRSF PIRSF000149 1 334 2.5E-135 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 SMART SM00846 3 154 3.3E-94 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 312 2.0E-61 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 SUPERFAMILY SSF55347 154 313 4.76E-67 T 29-03-2018 AM474_RS05220 85b487092eab6472ee6491311a6710b8 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 6.0E-38 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS05600 683c747fa89c692545648b408245bde4 253 SUPERFAMILY SSF54534 30 228 1.79E-56 T 29-03-2018 AM474_RS05600 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:1.10.287.460 19 111 2.7E-26 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS05600 683c747fa89c692545648b408245bde4 253 Gene3D G3DSA:3.10.50.40 112 229 5.4E-43 T 29-03-2018 AM474_RS05600 683c747fa89c692545648b408245bde4 253 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 137 225 9.7E-26 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS05600 683c747fa89c692545648b408245bde4 253 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 130 1.7E-31 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 Pfam PF01545 Cation efflux family 32 222 1.3E-44 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 SUPERFAMILY SSF160240 228 300 1.02E-5 T 29-03-2018 AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 Gene3D G3DSA:1.20.1510.10 26 222 1.3E-56 T 29-03-2018 AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 Gene3D G3DSA:3.30.70.1350 224 302 8.8E-9 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 SUPERFAMILY SSF161111 27 223 4.58E-56 T 29-03-2018 AM474_RS08350 52bd0b4e14a11803a71d701a1c7876ba 365 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 27 299 1.0E-82 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 SMART SM00563 304 431 9.4E-27 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 PIRSF PIRSF500064 4 829 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 Pfam PF01553 Acyltransferase 292 428 8.5E-20 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 816 31.916 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 Gene3D G3DSA:3.40.1130.10 250 525 2.7E-33 T 29-03-2018 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 SUPERFAMILY SSF69593 263 523 7.19E-32 T 29-03-2018 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 812 0.0 T 29-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 AM474_RS07725 4d37bb70730e1aca94f44bb503207de9 834 PIRSF PIRSF000437 21 827 0.0 T 29-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 246 326 1.1E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 549 689 6.3E-37 T 29-03-2018 IPR020992 Tail specific protease, C-terminal AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Gene3D G3DSA:3.30.750.44 162 255 2.0E-24 T 29-03-2018 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 210 565 3.5E-96 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Gene3D G3DSA:3.90.226.10 354 661 1.8E-54 T 29-03-2018 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 SMART SM00245 336 545 3.1E-56 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 SUPERFAMILY SSF52096 188 271 2.15E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 SUPERFAMILY SSF52096 364 549 2.15E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Gene3D G3DSA:2.30.42.10 256 353 3.0E-11 T 29-03-2018 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 SMART SM00228 253 330 6.7E-5 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 SUPERFAMILY SSF50156 244 328 3.84E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS05565 1abbcb865a7dd83b3876b7af544b7b5e 698 Pfam PF03572 Peptidase family S41 370 543 3.6E-51 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.20.20.70 1 381 5.1E-102 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 SUPERFAMILY SSF51905 380 683 3.75E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.40.50.720 502 541 0.4 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.40.50.720 382 501 8.7E-21 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Gene3D G3DSA:3.50.50.60 542 686 1.2E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 642 3.2E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 414 3.9E-7 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 609 623 3.9E-7 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 667 3.9E-7 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 SUPERFAMILY SSF51395 4 370 5.64E-98 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 1.9E-5 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 412 1.9E-5 T 29-03-2018 AM474_RS15785 9c9a14dbacfd9ca5460b078f145a541e 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 1.1E-62 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SUPERFAMILY SSF52172 1 177 7.18E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00862 145 220 5.4E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 SMART SM00448 1 112 2.2E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:3.40.50.2300 1 116 5.3E-32 T 29-03-2018 AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Gene3D G3DSA:1.10.10.10 117 224 7.4E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24835 d49ae68fc4cf8fa4f5c33ea27aa552aa 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 8.3E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 Pfam PF11992 Domain of unknown function (DUF3488) 9 321 4.6E-109 T 29-03-2018 IPR021878 Protein of unknown function DUF3488 AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 Gene3D G3DSA:3.90.260.10 348 537 9.7E-21 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 Pfam PF01841 Transglutaminase-like superfamily 349 465 2.8E-23 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 SMART SM00460 396 467 3.2E-20 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 SUPERFAMILY SSF54001 270 600 1.82E-74 T 29-03-2018 AM474_RS03550 57c6f6167032ada3f9665d12775e1ed2 668 Pfam PF13559 Domain of unknown function (DUF4129) 581 642 1.5E-10 T 29-03-2018 IPR025403 Domain of unknown function DUF4129 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.9E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 3.4E-97 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00448 1 111 2.3E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SUPERFAMILY SSF52172 1 176 1.13E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:1.10.10.10 121 227 7.8E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Pfam PF00072 Response regulator receiver domain 3 111 8.5E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 SMART SM00862 145 220 9.6E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS26305 0ca6c558d7c9b4ebf6f1d166ea7e28a4 229 Gene3D G3DSA:3.40.50.2300 1 120 1.7E-34 T 29-03-2018 AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Pfam PF09102 Exotoxin A, targeting 277 409 3.0E-90 T 29-03-2018 IPR015186 Exotoxin A, middle domain AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Gene3D G3DSA:3.90.1350.10 266 423 3.2E-81 T 29-03-2018 IPR015186 Exotoxin A, middle domain AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Pfam PF09009 Exotoxin A catalytic 413 638 3.0E-156 T 29-03-2018 IPR015099 Exotoxin A catalytic domain GO:0047286 AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 SUPERFAMILY SSF49899 27 276 3.96E-135 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 SUPERFAMILY SSF56399 420 631 3.11E-79 T 29-03-2018 AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Pfam PF09101 Exotoxin A binding 27 275 2.1E-121 T 29-03-2018 IPR015185 Exotoxin A, binding AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 SUPERFAMILY SSF56864 277 419 4.97E-70 T 29-03-2018 IPR015186 Exotoxin A, middle domain AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Gene3D G3DSA:2.60.120.200 26 255 1.4E-124 T 29-03-2018 AM474_RS24665 1ad214353d87ace3300c3a7062b91ea7 638 Gene3D G3DSA:3.90.175.10 432 632 1.0E-61 T 29-03-2018 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 SUPERFAMILY SSF48452 150 265 3.8E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 Pfam PF13525 Outer membrane lipoprotein 153 274 6.2E-10 T 29-03-2018 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 Pfam PF16331 TolA binding protein trimerisation 61 116 4.4E-12 T 29-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 153 270 1.2E-41 T 29-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal AM474_RS23605 028bdd6488a6daf52815461b47949464 274 Gene3D G3DSA:1.20.5.50 60 123 4.7E-4 T 29-03-2018 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 1 273 18.832 T 29-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 AM474_RS23605 028bdd6488a6daf52815461b47949464 274 Gene3D G3DSA:1.25.40.10 154 274 4.0E-18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 Pfam PF00106 short chain dehydrogenase 4 192 3.4E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 Gene3D G3DSA:3.40.50.720 2 262 5.5E-57 T 29-03-2018 AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 6.6E-4 T 29-03-2018 AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 PIRSF PIRSF000126 1 260 1.9E-69 T 29-03-2018 AM474_RS11355 059ec4becca54abbe45a73345091d0a0 266 SUPERFAMILY SSF51735 3 256 5.8E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS28800 6998a8da09d1ef242a94cb325fb7ce2a 162 Gene3D G3DSA:3.10.450.50 10 153 1.3E-13 T 29-03-2018 AM474_RS28800 6998a8da09d1ef242a94cb325fb7ce2a 162 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 15 162 5.0E-85 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS28800 6998a8da09d1ef242a94cb325fb7ce2a 162 Pfam PF03284 Phenazine biosynthesis protein A/B 10 162 8.4E-91 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS28800 6998a8da09d1ef242a94cb325fb7ce2a 162 SUPERFAMILY SSF54427 19 148 9.83E-25 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS25020 29b5554ea4cc9eaf4d7750ce5223c243 499 SUPERFAMILY SSF51905 4 386 3.46E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25020 29b5554ea4cc9eaf4d7750ce5223c243 499 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 4.0E-6 T 29-03-2018 AM474_RS25020 29b5554ea4cc9eaf4d7750ce5223c243 499 Gene3D G3DSA:3.50.50.60 169 431 4.9E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25020 29b5554ea4cc9eaf4d7750ce5223c243 499 Gene3D G3DSA:3.50.50.60 6 168 1.2E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25020 29b5554ea4cc9eaf4d7750ce5223c243 499 Pfam PF00743 Flavin-binding monooxygenase-like 82 219 7.7E-9 T 29-03-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 101.231 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SMART SM00433 37 799 7.5E-272 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF55874 7 219 5.24E-75 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF54211 222 394 2.85E-57 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SMART SM00387 33 177 2.5E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.8E-83 T 29-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.40.50.670 403 803 3.2E-109 T 29-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 6.3E-303 T 29-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 175 1.6E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 795 2.8E-30 T 29-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF01751 Toprim domain 421 533 1.1E-17 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Pfam PF00204 DNA gyrase B 222 392 6.5E-57 T 29-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.30.230.10 226 394 5.5E-61 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 29-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 Gene3D G3DSA:3.30.565.10 2 225 1.1E-74 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF56719 732 796 2.59E-88 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 SUPERFAMILY SSF56719 396 562 2.59E-88 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS14860 198f6ef710d4f6a9fa96d428c423bf4c 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 9.7E-72 T 29-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 7.0E-223 T 29-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 SUPERFAMILY SSF52540 317 598 3.02E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Gene3D G3DSA:3.40.50.300 456 628 1.6E-27 T 29-03-2018 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Pfam PF17191 RecG wedge domain 11 170 1.1E-14 T 29-03-2018 IPR033454 RecG, wedge domain AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Pfam PF00271 Helicase conserved C-terminal domain 479 586 9.2E-16 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Gene3D G3DSA:3.40.50.300 251 455 8.0E-32 T 29-03-2018 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 SMART SM00490 503 587 1.1E-21 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Gene3D G3DSA:2.40.50.140 50 140 1.4E-11 T 29-03-2018 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Pfam PF00270 DEAD/DEAH box helicase 293 430 9.0E-18 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 SMART SM00487 265 458 5.7E-26 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 Gene3D G3DSA:1.10.150.20 1 49 0.0011 T 29-03-2018 AM474_RS16085 b6b308f1bce01f26a9413c2abf3802a9 691 SUPERFAMILY SSF50249 7 172 2.06E-35 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS02030 6254d8eb5766cc47d494be25ee825e84 114 Pfam PF05899 Protein of unknown function (DUF861) 39 111 6.2E-28 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS02030 6254d8eb5766cc47d494be25ee825e84 114 Gene3D G3DSA:2.60.120.10 10 114 2.8E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS02030 6254d8eb5766cc47d494be25ee825e84 114 SUPERFAMILY SSF51182 16 113 1.69E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS01750 ab4cef2e62586f9d145fce9a8a74e285 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 5.3E-55 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 AM474_RS01750 ab4cef2e62586f9d145fce9a8a74e285 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 3.7E-155 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM474_RS30000 2eebbeef8b4c623c93a9e30248787b99 149 Gene3D G3DSA:3.30.240.20 78 147 1.1E-15 T 29-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AM474_RS30000 2eebbeef8b4c623c93a9e30248787b99 149 Pfam PF04239 Protein of unknown function (DUF421) 85 146 1.4E-10 T 29-03-2018 IPR007353 Protein of unknown function DUF421 AM474_RS32245 76df8a8d2ebd3722dc4a5d886023d6e0 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 9 162 3.0E-83 T 29-03-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 AM474_RS32245 76df8a8d2ebd3722dc4a5d886023d6e0 162 Gene3D G3DSA:3.10.450.50 4 162 1.1E-29 T 29-03-2018 AM474_RS32245 76df8a8d2ebd3722dc4a5d886023d6e0 162 SUPERFAMILY SSF54427 5 161 1.16E-52 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS32245 76df8a8d2ebd3722dc4a5d886023d6e0 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 4.4E-47 T 29-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF02543 Carbamoyltransferase N-terminus 5 354 2.7E-57 T 29-03-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 Pfam PF16861 Carbamoyltransferase C-terminus 408 575 1.9E-61 T 29-03-2018 IPR031730 Carbamoyltransferase, C-terminal AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 22 83 8.42E-12 T 29-03-2018 AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 255 359 8.42E-12 T 29-03-2018 AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 SUPERFAMILY SSF53067 132 218 8.42E-12 T 29-03-2018 AM474_RS18145 f998d5cd7448d51fa00b4bbe7af16412 585 Gene3D G3DSA:3.30.420.40 2 152 4.7E-24 T 29-03-2018 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 1.9E-30 T 29-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 155 256 2.43E-31 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 2 153 6.9E-47 T 29-03-2018 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 9.0E-44 T 29-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 155 267 3.6E-33 T 29-03-2018 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 29-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 443 46.769 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 5.2E-19 T 29-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF55957 357 444 1.44E-20 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.40.120.10 268 372 3.9E-28 T 29-03-2018 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 257 363 1.18E-29 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 439 1.7E-11 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 441 5.8E-193 T 29-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 SUPERFAMILY SSF53738 2 180 9.81E-47 T 29-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 9.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 9.2E-15 T 29-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS19490 8d7e04a71b019cadae4aa6b0d3cb9362 445 Gene3D G3DSA:3.30.310.50 373 444 2.0E-18 T 29-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM474_RS30705 770099048c4f06a97c0fe129a72f4e4f 294 Gene3D G3DSA:1.10.10.10 13 75 2.1E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30705 770099048c4f06a97c0fe129a72f4e4f 294 SUPERFAMILY SSF46689 5 121 8.78E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30705 770099048c4f06a97c0fe129a72f4e4f 294 Pfam PF13565 Homeodomain-like domain 46 119 1.8E-11 T 29-03-2018 AM474_RS26315 5488e12f1dd778535d8ab646900c4647 135 Pfam PF04304 Protein of unknown function (DUF454) 15 129 5.7E-41 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AM474_RS26315 5488e12f1dd778535d8ab646900c4647 135 PIRSF PIRSF016789 14 134 5.0E-37 T 29-03-2018 IPR007401 Protein of unknown function DUF454 AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Pfam PF00571 CBS domain 67 118 1.8E-6 T 29-03-2018 IPR000644 CBS domain AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Pfam PF00571 CBS domain 3 53 2.9E-12 T 29-03-2018 IPR000644 CBS domain AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SUPERFAMILY SSF54631 1 120 7.45E-31 T 29-03-2018 AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 Gene3D G3DSA:3.20.20.70 1 127 4.2E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SMART SM00116 10 57 4.1E-8 T 29-03-2018 IPR000644 CBS domain AM474_RS30280 0052ff8d2dc16d2f926fa0b48e9d84f7 137 SMART SM00116 74 122 1.5E-4 T 29-03-2018 IPR000644 CBS domain AM474_RS03435 a7647a1e398569b18378d94138760b73 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 8.5E-61 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 130 185 4.6E-22 T 29-03-2018 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 SMART SM01185 67 122 3.1E-14 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 7.7E-13 T 29-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 130 186 6.17E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS03435 a7647a1e398569b18378d94138760b73 188 SMART SM00841 130 185 7.5E-25 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 PIRSF PIRSF005901 1 187 4.0E-57 T 29-03-2018 IPR020599 Translation elongation factor P/YeiP AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.3E-21 T 29-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50104 1 62 5.48E-17 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-21 T 29-03-2018 IPR013185 Translation elongation factor, KOW-like AM474_RS03435 a7647a1e398569b18378d94138760b73 188 SUPERFAMILY SSF50249 65 128 1.67E-12 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.30.30.30 2 61 3.3E-21 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 48.49 T 29-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM474_RS03435 a7647a1e398569b18378d94138760b73 188 Gene3D G3DSA:2.40.50.140 65 127 2.9E-17 T 29-03-2018 AM474_RS09595 b8102bd0aee9b131c557f51aa6f17399 287 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 247 9.0E-87 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM474_RS09595 b8102bd0aee9b131c557f51aa6f17399 287 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 34 270 1.0E-73 T 29-03-2018 AM474_RS09595 b8102bd0aee9b131c557f51aa6f17399 287 Gene3D G3DSA:3.40.190.10 20 124 5.2E-11 T 29-03-2018 AM474_RS09595 b8102bd0aee9b131c557f51aa6f17399 287 Gene3D G3DSA:3.40.190.10 125 266 5.5E-23 T 29-03-2018 AM474_RS09595 b8102bd0aee9b131c557f51aa6f17399 287 SUPERFAMILY SSF53850 45 239 5.81E-42 T 29-03-2018 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 SUPERFAMILY SSF50129 1 96 5.56E-34 T 29-03-2018 IPR011032 GroES-like AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 29-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.57 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.9E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.9E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.9E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.9E-31 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 Gene3D G3DSA:2.30.33.40 1 96 3.5E-36 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 4.4E-32 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS21465 5346c5c2f4ce088d6e5028068f1e4220 97 SMART SM00883 2 95 9.5E-56 T 29-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 87 102 4.7E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 4.7E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 70 4.7E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 4.7E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 SMART SM00418 38 116 5.6E-26 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 SUPERFAMILY SSF46785 27 113 1.13E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 Gene3D G3DSA:1.10.10.10 2 125 3.5E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08355 cdf74e6b147e13721e929a17f9cf344c 125 Pfam PF01022 Bacterial regulatory protein, arsR family 45 89 2.7E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 484 8.1E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SUPERFAMILY SSF47226 632 737 1.7E-12 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Gene3D G3DSA:1.20.120.160 635 739 1.2E-8 T 29-03-2018 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Gene3D G3DSA:3.40.50.2300 492 634 2.2E-32 T 29-03-2018 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SMART SM00448 502 617 9.7E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 35 141 5.4E-15 T 29-03-2018 IPR033414 Periplasmic sensor domain AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Gene3D G3DSA:3.30.565.10 327 491 1.0E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SUPERFAMILY SSF47384 243 321 3.73E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Pfam PF00072 Response regulator receiver domain 504 617 1.8E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 6.3E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SUPERFAMILY SSF55874 312 484 1.19E-43 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 4.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 4.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 4.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 4.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Pfam PF01627 Hpt domain 653 712 1.3E-7 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SUPERFAMILY SSF52172 502 620 4.7E-31 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 Gene3D G3DSA:1.10.287.130 248 319 1.7E-18 T 29-03-2018 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SMART SM00387 370 486 7.8E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SMART SM00388 258 323 1.1E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS18265 5ff442fbc86fb909e3069af5f4c0fb15 750 SMART SM00304 169 225 1.7E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 SUPERFAMILY SSF56645 33 235 2.88E-48 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 SUPERFAMILY SSF47203 237 410 9.99E-23 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Gene3D G3DSA:1.10.540.10 18 134 3.8E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 227 1.9E-9 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Gene3D G3DSA:2.40.110.10 136 226 3.4E-20 T 29-03-2018 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 PIRSF PIRSF016578 14 406 2.6E-36 T 29-03-2018 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 386 4.1E-22 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 126 1.0E-9 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 21 411 1.3E-198 T 29-03-2018 IPR023922 Sulphate-starvation-induced SfnB AM474_RS31235 3fb265888615c54cb3831d01dbf67945 411 Gene3D G3DSA:1.20.140.10 227 388 2.1E-23 T 29-03-2018 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 Gene3D G3DSA:1.10.1660.10 1 55 1.3E-21 T 29-03-2018 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF09278 MerR, DNA binding 44 108 2.5E-21 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 SMART SM00422 1 70 1.0E-32 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 Pfam PF00376 MerR family regulatory protein 2 39 6.8E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 Gene3D G3DSA:1.10.1660.10 56 130 6.8E-23 T 29-03-2018 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 2.7E-53 T 29-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 AM474_RS19340 b25115bb68686a75a18d18d8467ccf25 132 SUPERFAMILY SSF46955 1 126 5.13E-40 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS24015 3aa8760f0ea805d96720cdc06bd726f6 453 Pfam PF02646 RmuC family 136 432 2.9E-107 T 29-03-2018 IPR003798 DNA recombination RmuC AM474_RS24015 3aa8760f0ea805d96720cdc06bd726f6 453 Gene3D G3DSA:1.20.5.170 2 90 0.017 T 29-03-2018 AM474_RS24015 3aa8760f0ea805d96720cdc06bd726f6 453 Gene3D G3DSA:1.20.5.340 150 297 1.5E-25 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 Gene3D G3DSA:3.30.230.10 545 780 7.3E-28 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 SUPERFAMILY SSF52540 35 109 9.58E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 SUPERFAMILY SSF52540 313 536 9.58E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 SUPERFAMILY SSF54211 565 757 3.07E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 754 1.4E-7 T 29-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 Pfam PF13654 AAA domain 30 540 1.5E-179 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 Gene3D G3DSA:3.40.50.300 39 463 1.5E-6 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 6.1E-13 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 6.1E-13 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 6.1E-13 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 725 6.1E-13 T 29-03-2018 AM474_RS20465 c1185b2a06250a978b9aea1cd905f424 817 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 66 85 6.1E-13 T 29-03-2018 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF01225 Mur ligase family, catalytic domain 2 100 6.1E-19 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.40.50.720 1 90 1.7E-12 T 29-03-2018 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 60.768 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.90.190.20 314 451 1.1E-23 T 29-03-2018 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Gene3D G3DSA:3.40.1190.10 91 313 1.2E-42 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 360 1.1E-8 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF53244 311 448 5.49E-34 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF51984 1 90 1.57E-23 T 29-03-2018 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.7E-215 T 29-03-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 Pfam PF08245 Mur ligase middle domain 108 291 8.4E-22 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS09970 032c22f09a626daf4831fe3da023f7fb 451 SUPERFAMILY SSF53623 94 308 1.57E-52 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 9.9E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 9.9E-8 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 Pfam PF12833 Helix-turn-helix domain 191 268 3.6E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 167 217 3.76E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:1.10.10.60 225 278 1.3E-15 T 29-03-2018 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 Gene3D G3DSA:2.60.120.10 9 224 4.3E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 SMART SM00342 184 267 4.1E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 SUPERFAMILY SSF46689 220 269 4.21E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS27785 afb405577b63b4ca83abfec3e80382be 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 SUPERFAMILY SSF50331 238 363 7.05E-26 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 SMART SM00382 30 213 1.5E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 SUPERFAMILY SSF52540 4 245 6.55E-86 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 Gene3D G3DSA:3.40.50.300 1 240 2.4E-75 T 29-03-2018 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 Pfam PF00005 ABC transporter 21 163 2.8E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 Gene3D G3DSA:2.40.50.100 241 296 4.2E-11 T 29-03-2018 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 Gene3D G3DSA:2.40.50.140 297 348 1.5E-12 T 29-03-2018 AM474_RS05175 30dc967434e0cba656d0b51f85d55fd6 386 Pfam PF03459 TOBE domain 297 353 6.7E-9 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM474_RS18345 9afdc0a2dcf56c3e0105771d13ad846a 337 Pfam PF13449 Esterase-like activity of phytase 44 194 1.8E-12 T 29-03-2018 IPR027372 Phytase-like domain AM474_RS18345 9afdc0a2dcf56c3e0105771d13ad846a 337 Gene3D G3DSA:2.120.10.30 27 212 3.6E-5 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS18345 9afdc0a2dcf56c3e0105771d13ad846a 337 SUPERFAMILY SSF101898 44 276 3.92E-8 T 29-03-2018 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 2.9E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 2.9E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 2.9E-23 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 44.358 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.7E-105 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Gene3D G3DSA:3.90.230.10 2 261 4.6E-93 T 29-03-2018 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 SUPERFAMILY SSF55920 4 254 1.44E-95 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS07645 94d89c7b2d7f9dda8fb9b688b18b02eb 261 Pfam PF00557 Metallopeptidase family M24 12 241 1.0E-59 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 53.856 T 29-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 PIRSF PIRSF006621 1 319 5.8E-76 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 SUPERFAMILY SSF51395 3 311 4.21E-69 T 29-03-2018 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 Gene3D G3DSA:3.20.20.70 1 241 3.8E-43 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 Pfam PF01207 Dihydrouridine synthase (Dus) 5 242 2.2E-64 T 29-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS04880 a233378be42a38fcb13e8b3c43a94dc2 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 29-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 Pfam PF00797 N-acetyltransferase 26 261 5.5E-71 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 Gene3D G3DSA:3.30.2140.10 158 279 1.5E-17 T 29-03-2018 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 Gene3D G3DSA:3.30.2140.10 1 141 3.0E-39 T 29-03-2018 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 SUPERFAMILY SSF54001 3 263 9.22E-75 T 29-03-2018 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 49 72 2.3E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 73 95 2.3E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 25 48 2.3E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM474_RS19080 4f37df84e9ef1b7168cae3614df6b8f9 279 PRINTS PR01543 Arylamine N-acetyltransferase signature 107 132 2.3E-11 T 29-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 SUPERFAMILY SSF52402 1 138 5.09E-29 T 29-03-2018 AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 Gene3D G3DSA:3.40.50.620 1 139 2.2E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 PRINTS PR01438 Universal stress protein signature 100 112 4.9E-9 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 PRINTS PR01438 Universal stress protein signature 2 20 4.9E-9 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 PRINTS PR01438 Universal stress protein signature 118 140 4.9E-9 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS03345 87adb3acd2056fb6e3058fc595a66c31 148 Pfam PF00582 Universal stress protein family 1 138 7.6E-28 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 Pfam PF00005 ABC transporter 33 172 3.1E-16 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 Pfam PF00005 ABC transporter 357 486 2.8E-16 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 SUPERFAMILY SSF52540 7 231 1.96E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 SUPERFAMILY SSF52540 356 520 9.16E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 Gene3D G3DSA:3.40.50.300 337 524 1.8E-33 T 29-03-2018 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 Gene3D G3DSA:3.40.50.300 1 276 1.5E-40 T 29-03-2018 AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 SMART SM00382 365 532 2.5E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS26190 bb03efa20065f9733597fa33f52d210b 538 SMART SM00382 31 216 2.2E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS30495 38f1ea2cbace0fb358617538e52ec4a0 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM474_RS30495 38f1ea2cbace0fb358617538e52ec4a0 385 Gene3D G3DSA:1.20.1090.10 183 385 6.1E-57 T 29-03-2018 AM474_RS30495 38f1ea2cbace0fb358617538e52ec4a0 385 SUPERFAMILY SSF56796 3 381 1.57E-114 T 29-03-2018 AM474_RS30495 38f1ea2cbace0fb358617538e52ec4a0 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 371 1.0E-112 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM474_RS30495 38f1ea2cbace0fb358617538e52ec4a0 385 Gene3D G3DSA:3.40.50.1970 8 182 7.6E-45 T 29-03-2018 AM474_RS18400 bb5b36858471a644f11624a2203af487 271 SUPERFAMILY SSF52821 3 133 1.23E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 Gene3D G3DSA:3.40.250.10 142 271 2.0E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 SMART SM00450 149 267 6.1E-22 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 SMART SM00450 11 126 2.3E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM474_RS18400 bb5b36858471a644f11624a2203af487 271 ProSitePatterns PS00683 Rhodanese C-terminal signature. 251 261 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM474_RS18400 bb5b36858471a644f11624a2203af487 271 SUPERFAMILY SSF52821 145 270 2.23E-29 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 Gene3D G3DSA:3.40.250.10 2 141 4.0E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 Pfam PF00581 Rhodanese-like domain 151 263 1.9E-16 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS18400 bb5b36858471a644f11624a2203af487 271 Pfam PF00581 Rhodanese-like domain 13 122 1.1E-13 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 Gene3D G3DSA:1.10.800.10 1 249 4.5E-94 T 29-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 SUPERFAMILY SSF56534 3 248 3.27E-100 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 229 1.5E-46 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 74 96 1.9E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 138 157 1.9E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 178 196 1.9E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 1.9E-9 T 29-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 117 128 - T 29-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AM474_RS23030 8256d551a02da2e7a81cb2df2d01e652 262 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 9 254 9.4E-134 T 29-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AM474_RS21095 b6472aa73c7b03790e268dc66ce5b448 179 Gene3D G3DSA:3.40.50.1000 6 179 1.1E-28 T 29-03-2018 IPR023214 HAD-like domain AM474_RS21095 b6472aa73c7b03790e268dc66ce5b448 179 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 153 1.7E-6 T 29-03-2018 IPR023214 HAD-like domain AM474_RS21095 b6472aa73c7b03790e268dc66ce5b448 179 SUPERFAMILY SSF56784 13 172 2.23E-42 T 29-03-2018 IPR023214 HAD-like domain AM474_RS21095 b6472aa73c7b03790e268dc66ce5b448 179 PIRSF PIRSF006118 4 179 1.1E-68 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS21095 b6472aa73c7b03790e268dc66ce5b448 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 17 169 2.1E-50 T 29-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS14985 68235583c39f3d1924385eae27cd8177 169 SUPERFAMILY SSF51261 23 138 1.1E-26 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS14985 68235583c39f3d1924385eae27cd8177 169 Gene3D G3DSA:2.70.70.10 21 168 2.5E-23 T 29-03-2018 AM474_RS14985 68235583c39f3d1924385eae27cd8177 169 Pfam PF01551 Peptidase family M23 50 137 3.0E-19 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 SUPERFAMILY SSF55073 366 522 6.28E-49 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 359 522 3.1E-52 T 29-03-2018 IPR000160 GGDEF domain AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 SMART SM00267 350 523 2.5E-63 T 29-03-2018 IPR000160 GGDEF domain AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 Gene3D G3DSA:3.30.450.20 210 363 2.5E-9 T 29-03-2018 AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 519 2.4E-47 T 29-03-2018 IPR000160 GGDEF domain AM474_RS03535 00e14a7854ec3b6fd0585df469b6484a 525 Gene3D G3DSA:3.30.70.270 364 524 5.9E-57 T 29-03-2018 AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:1.10.287.470 238 280 1.4E-5 T 29-03-2018 AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 168 399 1.5E-41 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.50.100 290 453 0.016 T 29-03-2018 AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 SUPERFAMILY SSF111369 181 404 1.7E-22 T 29-03-2018 AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 Gene3D G3DSA:2.40.50.100 184 237 2.9E-11 T 29-03-2018 AM474_RS32265 3f60db454586883fe5615237b69c4ee8 484 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 162 471 4.2E-44 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF00406 Adenylate kinase 5 185 1.3E-56 T 29-03-2018 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 SUPERFAMILY SSF52540 1 212 1.01E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 81 97 5.1E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 4 17 5.1E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 32 46 5.1E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 156 171 5.1E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 PRINTS PR00094 Adenylate kinase signature 173 187 5.1E-36 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 Gene3D G3DSA:3.40.50.300 1 215 2.5E-65 T 29-03-2018 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 53.753 T 29-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-16 T 29-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 1.5E-77 T 29-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM474_RS07790 f0dc0c5191739deb9736065f8027b3d9 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 29-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM474_RS32335 cf8096f28a1c54530dfa1b92f9582272 165 SUPERFAMILY SSF52833 1 163 1.64E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32335 cf8096f28a1c54530dfa1b92f9582272 165 Gene3D G3DSA:3.40.30.10 6 165 3.6E-21 T 29-03-2018 AM474_RS32335 cf8096f28a1c54530dfa1b92f9582272 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 29-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 AM474_RS32335 cf8096f28a1c54530dfa1b92f9582272 165 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 165 38.273 T 29-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 AM474_RS32335 cf8096f28a1c54530dfa1b92f9582272 165 Pfam PF08534 Redoxin 19 162 1.1E-27 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 SUPERFAMILY SSF55205 1 419 2.78E-142 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 5.2E-178 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Gene3D G3DSA:3.65.10.10 21 222 1.9E-48 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 3.9E-119 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 45.313 T 29-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21135 e8ce8d0217dc95389f1892fc4e4ae7ca 421 Gene3D G3DSA:3.65.10.10 223 421 1.6E-43 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 Gene3D G3DSA:3.40.50.720 190 307 1.9E-24 T 29-03-2018 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.7E-219 T 29-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 SUPERFAMILY SSF50129 318 369 1.05E-11 T 29-03-2018 IPR011032 GroES-like AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 2.4E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 5.9E-23 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 SUPERFAMILY SSF50129 1 185 3.04E-71 T 29-03-2018 IPR011032 GroES-like AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 SUPERFAMILY SSF51735 161 333 5.16E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 SMART SM00829 10 367 1.4E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 Gene3D G3DSA:3.90.180.10 308 369 1.2E-5 T 29-03-2018 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS03180 318de278b6992e62d8e97370cb3df916 369 Gene3D G3DSA:3.90.180.10 1 189 1.9E-59 T 29-03-2018 AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 SMART SM00922 162 259 3.0E-12 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 SUPERFAMILY SSF54826 1 136 7.84E-27 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 38 133 2.8E-5 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 Gene3D G3DSA:3.30.390.10 1 114 4.7E-50 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 Gene3D G3DSA:3.20.20.120 115 371 1.3E-38 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 Pfam PF13378 Enolase C-terminal domain-like 166 374 1.5E-31 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS10075 babab076219cf1acacf7444146e9f98e 389 SUPERFAMILY SSF51604 122 376 2.15E-43 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS00320 75583b27c459d01e2ff446e2a3d06d2f 358 Gene3D G3DSA:3.20.20.140 1 355 2.4E-55 T 29-03-2018 AM474_RS00320 75583b27c459d01e2ff446e2a3d06d2f 358 Pfam PF04909 Amidohydrolase 3 348 4.6E-34 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS00320 75583b27c459d01e2ff446e2a3d06d2f 358 SUPERFAMILY SSF51556 1 31 1.55E-79 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS00320 75583b27c459d01e2ff446e2a3d06d2f 358 SUPERFAMILY SSF51556 65 352 1.55E-79 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.9E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.9E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 SUPERFAMILY SSF51735 5 229 9.3E-57 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PIRSF PIRSF000126 1 263 1.1E-72 T 29-03-2018 AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0061 T 29-03-2018 AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 Pfam PF00106 short chain dehydrogenase 9 197 2.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19055 db51ac04843e70a65582b50a8412aa8a 265 Gene3D G3DSA:3.40.50.720 6 265 3.0E-50 T 29-03-2018 AM474_RS20865 75675904831308b17845e5695b43157e 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 1.1E-47 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS20865 75675904831308b17845e5695b43157e 336 Gene3D G3DSA:1.10.3720.10 3 322 3.6E-49 T 29-03-2018 AM474_RS20865 75675904831308b17845e5695b43157e 336 SUPERFAMILY SSF161098 89 160 1.5E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS20865 75675904831308b17845e5695b43157e 336 SUPERFAMILY SSF161098 197 319 1.5E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS00505 5aa5bdb6cb3520382a288b8930e175f5 272 SUPERFAMILY SSF52096 16 271 6.01E-81 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS00505 5aa5bdb6cb3520382a288b8930e175f5 272 Gene3D G3DSA:3.90.226.10 15 223 4.2E-68 T 29-03-2018 AM474_RS00505 5aa5bdb6cb3520382a288b8930e175f5 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 271 4.4E-61 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS00505 5aa5bdb6cb3520382a288b8930e175f5 272 Gene3D G3DSA:1.10.12.10 224 272 4.6E-15 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS00505 5aa5bdb6cb3520382a288b8930e175f5 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 235 2.7E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 Gene3D G3DSA:3.40.50.2300 3 129 1.9E-34 T 29-03-2018 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 SMART SM00448 9 119 1.0E-41 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 Gene3D G3DSA:1.10.10.10 130 239 1.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 SMART SM00862 158 235 5.8E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 SUPERFAMILY SSF46894 154 235 1.22E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 SUPERFAMILY SSF52172 7 178 2.42E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS23355 0d5eed94524558b7a177a4d1e8dc922f 239 Pfam PF00072 Response regulator receiver domain 12 119 2.7E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS25370 ebc45dda55fa39bfe463a9c13eb2444b 314 Pfam PF13560 Helix-turn-helix domain 49 128 1.3E-14 T 29-03-2018 AM474_RS25370 ebc45dda55fa39bfe463a9c13eb2444b 314 SMART SM00530 53 125 6.9E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS25370 ebc45dda55fa39bfe463a9c13eb2444b 314 SUPERFAMILY SSF47413 73 121 2.75E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS25370 ebc45dda55fa39bfe463a9c13eb2444b 314 Gene3D G3DSA:1.10.260.40 43 130 1.6E-13 T 29-03-2018 AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Gene3D G3DSA:3.40.47.10 64 385 5.0E-35 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SMART SM00825 Beta-ketoacyl synthase 5 549 0.0015 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 154 380 8.3E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 382 496 1.1E-10 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Gene3D G3DSA:3.40.47.10 389 550 1.8E-28 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 182 371 9.1E-13 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM474_RS16970 34e1ebf5286dbc9d7a89414ab7a2c7f0 634 SUPERFAMILY SSF53901 344 546 2.99E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS17180 c210e4662b6a775b622a4bdd80d3c8a8 493 SUPERFAMILY SSF110296 145 262 2.25E-10 T 29-03-2018 AM474_RS17180 c210e4662b6a775b622a4bdd80d3c8a8 493 SUPERFAMILY SSF110296 425 482 2.25E-10 T 29-03-2018 AM474_RS17180 c210e4662b6a775b622a4bdd80d3c8a8 493 Gene3D G3DSA:2.130.10.10 128 484 2.8E-14 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 297 306 3.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 399 407 3.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 238 250 3.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 PRINTS PR00410 Phenol hydroxylase reductase family signature 313 332 3.0E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 Pfam PF01794 Ferric reductase like transmembrane component 40 165 2.0E-19 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 Gene3D G3DSA:3.40.50.80 308 434 3.5E-23 T 29-03-2018 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 SUPERFAMILY SSF52343 305 431 4.19E-24 T 29-03-2018 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 Pfam PF00175 Oxidoreductase NAD-binding domain 315 411 6.5E-6 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 Gene3D G3DSA:2.40.30.10 204 301 2.7E-16 T 29-03-2018 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 Pfam PF08022 FAD-binding domain 221 300 6.4E-8 T 29-03-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 AM474_RS11955 1d90e946dff3a99630e6f597b3644f32 434 SUPERFAMILY SSF63380 211 302 1.68E-18 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS24330 889319987f432779c3d669714069f14b 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 5.4E-55 T 29-03-2018 AM474_RS24330 889319987f432779c3d669714069f14b 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 192 0.0046 T 29-03-2018 AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 5.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 SUPERFAMILY SSF51735 10 254 1.3E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.0E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24330 889319987f432779c3d669714069f14b 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS24330 889319987f432779c3d669714069f14b 255 Gene3D G3DSA:3.40.50.720 1 255 4.9E-64 T 29-03-2018 AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 194 4.7E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 Gene3D G3DSA:3.40.30.10 1 97 2.9E-20 T 29-03-2018 AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 Gene3D G3DSA:1.20.1050.10 98 202 4.9E-20 T 29-03-2018 AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 2.7E-9 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 SUPERFAMILY SSF52833 1 78 2.24E-17 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS05375 c62d09aecddc42f316920b3d4383d3b8 205 SUPERFAMILY SSF47616 79 197 2.09E-24 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS24090 5a5bb36abe0b72713444afc4b63ad743 757 Gene3D G3DSA:3.20.20.80 349 734 2.4E-67 T 29-03-2018 AM474_RS24090 5a5bb36abe0b72713444afc4b63ad743 757 Gene3D G3DSA:3.20.20.80 221 348 8.9E-50 T 29-03-2018 AM474_RS24090 5a5bb36abe0b72713444afc4b63ad743 757 SUPERFAMILY SSF51445 387 714 5.39E-33 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS24090 5a5bb36abe0b72713444afc4b63ad743 757 Gene3D G3DSA:2.60.120.430 37 218 1.1E-29 T 29-03-2018 AM474_RS27255 abab0543899fe8330cca7d4f5d0606d0 154 SUPERFAMILY SSF53254 2 136 3.37E-23 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS27255 abab0543899fe8330cca7d4f5d0606d0 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 2 136 1.7E-26 T 29-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 AM474_RS27255 abab0543899fe8330cca7d4f5d0606d0 154 SMART SM00855 2 110 1.0E-9 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS27255 abab0543899fe8330cca7d4f5d0606d0 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 3.2E-14 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS27255 abab0543899fe8330cca7d4f5d0606d0 154 Gene3D G3DSA:3.40.50.1240 1 153 1.3E-23 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS13010 89fac71e486e96c45307372683095943 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.268 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 9.9E-48 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 9.9E-48 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 9.9E-48 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 9.9E-48 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 9.9E-48 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 Pfam PF00303 Thymidylate synthase 2 264 6.5E-126 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 29-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 4.2E-41 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 1.6E-96 T 29-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 Gene3D G3DSA:3.30.572.10 1 264 1.6E-132 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS13010 89fac71e486e96c45307372683095943 264 SUPERFAMILY SSF55831 1 264 2.09E-131 T 29-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 147 4.5E-43 T 29-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 148 2.3E-35 T 29-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 Pfam PF13242 HAD-hyrolase-like 101 170 2.6E-12 T 29-03-2018 AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 SUPERFAMILY SSF56784 2 177 4.61E-46 T 29-03-2018 IPR023214 HAD-like domain AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 Gene3D G3DSA:3.40.50.1000 5 178 4.1E-32 T 29-03-2018 IPR023214 HAD-like domain AM474_RS14830 97be6f6df84036d6ac28b9928598a9dc 178 PIRSF PIRSF004682 1 174 3.5E-53 T 29-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 SUPERFAMILY SSF55347 179 486 4.58E-114 T 29-03-2018 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Gene3D G3DSA:3.30.360.10 186 488 1.1E-126 T 29-03-2018 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Gene3D G3DSA:3.40.50.720 6 185 6.7E-59 T 29-03-2018 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 485 1.6E-116 T 29-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 485 4.6E-174 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 SUPERFAMILY SSF51735 7 187 8.86E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 1.7E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 1.7E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 1.7E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 1.7E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 1.7E-49 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 29-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 487 90.04 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 PIRSF PIRSF000110 2 488 1.7E-170 T 29-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS05150 adb99d4ddd70ac7b58d4c1a4bc0f5e4a 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 184 1.0E-52 T 29-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 70 82 - T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Pfam PF05524 PEP-utilising enzyme, N-terminal 285 403 6.7E-21 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR00107 Phosphocarrier protein signature 185 201 2.2E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR00107 Phosphocarrier protein signature 210 225 2.2E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR00107 Phosphocarrier protein signature 225 242 2.2E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 717 735 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 211 226 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 SUPERFAMILY SSF52009 402 514 6.28E-26 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Gene3D G3DSA:3.30.1340.10 170 254 9.8E-19 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 185 192 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Gene3D G3DSA:3.20.20.60 530 840 2.1E-91 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 SUPERFAMILY SSF51621 530 819 3.93E-96 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 527 811 2.6E-95 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 178 253 4.6E-17 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 9 128 6.3E-37 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 8 130 3.8E-40 T 29-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Gene3D G3DSA:2.70.70.10 1 153 1.4E-46 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 SUPERFAMILY SSF47831 313 420 4.71E-24 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Pfam PF00381 PTS HPr component phosphorylation site 178 254 1.7E-17 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 316 832 1.8E-129 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Pfam PF00391 PEP-utilising enzyme, mobile domain 427 500 8.4E-18 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 SUPERFAMILY SSF51261 2 150 1.92E-47 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 770 782 8.9E-20 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 717 732 8.9E-20 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 568 587 8.9E-20 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 734 749 8.9E-20 T 29-03-2018 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Gene3D G3DSA:3.50.30.10 413 529 2.1E-22 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 SUPERFAMILY SSF55594 178 255 1.22E-18 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS08170 62b705ea50a289fbf245a245ddb398a7 842 Gene3D G3DSA:1.10.274.10 310 412 6.2E-26 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Gene3D G3DSA:3.30.565.10 279 431 4.2E-42 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 4.5E-22 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.5E-22 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 4.5E-22 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 4.5E-22 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 275 4.7E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 SUPERFAMILY SSF47384 161 196 2.16E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Gene3D G3DSA:3.10.580.10 5 159 3.0E-15 T 29-03-2018 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 SUPERFAMILY SSF54631 11 136 2.85E-13 T 29-03-2018 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 4.9E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Pfam PF00571 CBS domain 11 57 1.1E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Pfam PF00571 CBS domain 76 134 2.3E-6 T 29-03-2018 IPR000644 CBS domain AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 Gene3D G3DSA:1.10.287.130 160 273 5.3E-9 T 29-03-2018 AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 SMART SM00387 317 425 4.5E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS03595 1e7417d12083afcd1152b03702f4ae1b 433 SUPERFAMILY SSF55874 268 424 7.33E-46 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 29-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 7.0E-43 T 29-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 5.3E-27 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 Gene3D G3DSA:3.100.10.10 41 143 4.0E-21 T 29-03-2018 AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 SUPERFAMILY SSF52080 4 142 4.19E-42 T 29-03-2018 IPR021131 Ribosomal protein L18e/L15P AM474_RS11075 ec061363ac92988b174c6f55f9f7833e 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 17.429 T 29-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM474_RS24265 be07e366e7fef4b6c911f932c5dccd28 146 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM474_RS24265 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 98 144 2.2E-14 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM474_RS24265 be07e366e7fef4b6c911f932c5dccd28 146 Pfam PF00460 Flagella basal body rod protein 7 34 1.5E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM474_RS24265 be07e366e7fef4b6c911f932c5dccd28 146 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 146 6.5E-49 T 29-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 AM474_RS28915 1956c7adfa899564495c63484de2b8c9 675 SUPERFAMILY SSF51998 127 660 2.96E-152 T 29-03-2018 AM474_RS28915 1956c7adfa899564495c63484de2b8c9 675 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 127 658 4.0E-167 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM474_RS28915 1956c7adfa899564495c63484de2b8c9 675 Pfam PF03477 ATP cone domain 14 96 4.3E-20 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM474_RS28915 1956c7adfa899564495c63484de2b8c9 675 Gene3D G3DSA:3.20.70.20 136 665 1.1E-182 T 29-03-2018 AM474_RS28915 1956c7adfa899564495c63484de2b8c9 675 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 126 659 5.6E-133 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 Gene3D G3DSA:3.40.50.720 1 256 3.4E-62 T 29-03-2018 AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 255 2.4E-48 T 29-03-2018 AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 SUPERFAMILY SSF51735 1 255 7.72E-67 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00535 d55b80220c8bbd9af5d4cf8accb91f81 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.2E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00110 ea32ce893908089dd56b890d3aa36a7a 170 Gene3D G3DSA:3.10.450.160 31 170 8.7E-21 T 29-03-2018 AM474_RS00110 ea32ce893908089dd56b890d3aa36a7a 170 Pfam PF11776 Nickel/cobalt transporter regulator 136 162 3.3E-6 T 29-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AM474_RS24830 59bb7f814d400f2394dec1701116a9a7 200 TIGRFAM TIGR03304 OMP85_target: outer membrane insertion C-terminal signal 191 200 0.22 T 29-03-2018 IPR017690 Outer membrane insertion C-terminal signal, omp85 target AM474_RS24830 59bb7f814d400f2394dec1701116a9a7 200 Gene3D G3DSA:2.40.160.20 20 200 4.4E-11 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS24830 59bb7f814d400f2394dec1701116a9a7 200 SUPERFAMILY SSF56925 45 200 1.86E-18 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS24830 59bb7f814d400f2394dec1701116a9a7 200 Pfam PF13505 Outer membrane protein beta-barrel domain 9 200 1.4E-9 T 29-03-2018 IPR027385 Outer membrane protein beta-barrel AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 Pfam PF08281 Sigma-70, region 4 98 149 2.3E-14 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 SUPERFAMILY SSF88659 67 155 8.07E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 152 1.5E-22 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 Gene3D G3DSA:1.10.1740.10 1 62 3.7E-13 T 29-03-2018 AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 Gene3D G3DSA:1.10.10.10 63 156 1.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 Pfam PF04542 Sigma-70 region 2 2 65 1.2E-9 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31530 c016b283568ffb7b9f8e820e54ff2547 159 SUPERFAMILY SSF88946 2 83 3.18E-13 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:2.60.40.10 18 115 1.0E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:1.20.58.280 116 184 3.1E-8 T 29-03-2018 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 SMART SM00642 213 651 7.7E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:2.60.40.1180 570 664 5.5E-24 T 29-03-2018 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Pfam PF00128 Alpha amylase, catalytic domain 227 332 4.2E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Pfam PF11896 Domain of unknown function (DUF3416) 21 203 3.9E-46 T 29-03-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 18 661 47.366 T 29-03-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 Gene3D G3DSA:3.20.20.80 205 568 1.9E-63 T 29-03-2018 AM474_RS30090 6fdc4d22d02137b789a89097c40c6427 664 SUPERFAMILY SSF51445 201 565 4.47E-89 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS02435 9afd8674eb2d439a13399bf12e7042fe 129 Pfam PF16931 Putative phage holin 1 111 6.3E-26 T 29-03-2018 IPR032637 Putative phage holin-like AM474_RS26020 61783e882582535711fea5f8803f1912 321 SMART SM00342 216 299 2.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS26020 61783e882582535711fea5f8803f1912 321 Gene3D G3DSA:1.10.10.60 126 254 2.7E-13 T 29-03-2018 AM474_RS26020 61783e882582535711fea5f8803f1912 321 Gene3D G3DSA:1.10.10.60 255 307 7.5E-11 T 29-03-2018 AM474_RS26020 61783e882582535711fea5f8803f1912 321 Pfam PF06719 AraC-type transcriptional regulator N-terminus 38 187 1.7E-39 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM474_RS26020 61783e882582535711fea5f8803f1912 321 SUPERFAMILY SSF46689 201 249 2.69E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26020 61783e882582535711fea5f8803f1912 321 SUPERFAMILY SSF46689 253 303 1.03E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26020 61783e882582535711fea5f8803f1912 321 Pfam PF12833 Helix-turn-helix domain 222 297 5.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 220 4.5E-49 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 SUPERFAMILY SSF50891 92 248 3.22E-26 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 Gene3D G3DSA:3.30.1360.40 1 86 5.3E-16 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 SUPERFAMILY SSF160467 6 96 9.94E-15 T 29-03-2018 AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 SMART SM00796 5 226 4.6E-74 T 29-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D AM474_RS12210 fb2f5377143c383ee26c059a6186f4c9 292 Gene3D G3DSA:2.40.100.10 90 250 1.4E-38 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS25735 7d4e4d03551c49aee9adc85c7862a314 207 Pfam PF13489 Methyltransferase domain 32 179 1.4E-14 T 29-03-2018 AM474_RS25735 7d4e4d03551c49aee9adc85c7862a314 207 Gene3D G3DSA:3.40.50.150 10 206 1.7E-30 T 29-03-2018 AM474_RS25735 7d4e4d03551c49aee9adc85c7862a314 207 SUPERFAMILY SSF53335 16 203 2.09E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS18935 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF51246 328 423 2.04E-33 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.90.600.10 329 423 6.4E-36 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 43.471 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF52440 1 102 1.18E-34 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 295 1.4E-82 T 29-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 SMART SM01209 102 295 4.4E-141 T 29-03-2018 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.40.50.20 2 94 3.4E-36 T 29-03-2018 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 SMART SM01210 329 422 3.2E-55 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.30.470.20 190 328 1.7E-58 T 29-03-2018 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 7.9E-30 T 29-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 7.0E-180 T 29-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 SUPERFAMILY SSF56059 103 319 3.01E-64 T 29-03-2018 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Gene3D G3DSA:3.30.1490.20 133 188 1.7E-23 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 29-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS18935 35238b1d1416e88a392103466f143b16 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 3.0E-33 T 29-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS16235 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.99 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS16235 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 29-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS16235 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 2.4E-25 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS16235 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 SUPERFAMILY SSF57829 1 49 2.93E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM474_RS16235 0c8b2ee8b1ac9d6f16c7ca263da8107d 51 Pfam PF00471 Ribosomal protein L33 4 49 3.6E-17 T 29-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS04850 a73fc4983a8b55e234b5db48f8a7d3d4 125 Gene3D G3DSA:3.30.1330.40 6 125 6.5E-33 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS04850 a73fc4983a8b55e234b5db48f8a7d3d4 125 SUPERFAMILY SSF55298 13 124 6.6E-34 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS04850 a73fc4983a8b55e234b5db48f8a7d3d4 125 Pfam PF01042 Endoribonuclease L-PSP 15 120 2.5E-28 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 607 736 3.6E-49 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 22 143 5.6E-24 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 388 402 - T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 SUPERFAMILY SSF53383 149 599 5.39E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 SUPERFAMILY SSF55904 602 751 1.24E-43 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Gene3D G3DSA:3.90.1150.10 455 631 1.4E-57 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Gene3D G3DSA:3.90.100.10 632 751 2.0E-35 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 PIRSF PIRSF009393 3 751 7.7E-290 T 29-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Gene3D G3DSA:3.40.640.10 149 454 6.4E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS28370 2cabf40104537edbc1bc86dd9cd6c8bc 751 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 582 1.9E-160 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 2.6E-17 T 29-03-2018 IPR013987 PhnA protein, N-terminal AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF57783 3 37 2.13E-15 T 29-03-2018 AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.20.25.10 2 40 2.8E-19 T 29-03-2018 AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.5E-50 T 29-03-2018 IPR004624 PhnA protein AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 Pfam PF03831 PhnA domain 46 113 6.3E-33 T 29-03-2018 IPR013988 PhnA protein, C-terminal AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 Gene3D G3DSA:2.30.30.40 45 112 1.6E-36 T 29-03-2018 AM474_RS14145 f48df482eaaaff8ac9096770d1b37901 113 SUPERFAMILY SSF82057 41 113 9.16E-29 T 29-03-2018 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM00878 336 441 1.6E-63 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 SMART SM01209 114 292 0.007 T 29-03-2018 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.3E-38 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF56059 83 346 3.01E-69 T 29-03-2018 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF52440 1 113 1.87E-46 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.3E-44 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.1490.20 124 210 1.3E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 SUPERFAMILY SSF51246 331 444 3.92E-42 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 1.6E-228 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.30.470.20 211 444 5.3E-96 T 29-03-2018 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Gene3D G3DSA:3.40.50.20 1 123 3.4E-52 T 29-03-2018 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 5.3E-87 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS18970 ede04ff4cf4dcbe747c14149e941e370 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 SUPERFAMILY SSF54292 6 90 7.08E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 Gene3D G3DSA:3.10.20.30 1 76 1.9E-25 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 SUPERFAMILY SSF47741 86 155 1.1E-29 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 55 2.9E-6 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 Pfam PF01799 [2Fe-2S] binding domain 75 147 2.8E-27 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS27185 07e202b974d5d8009d780c7c55f48f5a 163 Gene3D G3DSA:1.10.150.120 77 163 1.2E-32 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.2E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 251 4.9E-59 T 29-03-2018 AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 201 0.0056 T 29-03-2018 AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 Gene3D G3DSA:3.40.50.720 45 260 9.0E-61 T 29-03-2018 AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 Gene3D G3DSA:3.40.50.720 4 44 5.7E-6 T 29-03-2018 AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15125 cf277e4e053f76a9d5edf7bb20a02296 260 SUPERFAMILY SSF51735 9 253 2.15E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Pfam PF02754 Cysteine-rich domain 833 893 0.011 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Pfam PF02754 Cysteine-rich domain 704 795 0.0058 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Pfam PF12838 4Fe-4S dicluster domain 539 608 2.6E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 540 551 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Gene3D G3DSA:3.30.465.10 91 288 1.0E-29 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 SUPERFAMILY SSF46548 492 620 1.69E-20 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Gene3D G3DSA:3.30.43.10 2 90 1.2E-13 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 SUPERFAMILY SSF56176 7 264 7.36E-58 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 514 1.8E-62 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Gene3D G3DSA:1.10.45.10 476 515 2.4E-12 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Pfam PF01565 FAD binding domain 41 175 4.2E-33 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 SUPERFAMILY SSF55103 269 521 6.05E-58 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS19370 61442d6ca4ed3af52499b11423cba40b 938 Gene3D G3DSA:1.10.1060.10 527 632 5.2E-16 T 29-03-2018 AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 SUPERFAMILY SSF51735 5 244 1.37E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 2.1E-6 T 29-03-2018 AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.3E-59 T 29-03-2018 AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-37 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 Gene3D G3DSA:3.40.50.720 40 245 7.8E-61 T 29-03-2018 AM474_RS23670 f7056373b4b891e4dc51aba86962f37e 245 Gene3D G3DSA:3.40.50.720 1 39 8.1E-8 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 SUPERFAMILY SSF69349 424 640 2.51E-45 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 486 7.8E-128 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 19 504 2.4E-178 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 SUPERFAMILY SSF69279 19 183 7.37E-49 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 SUPERFAMILY SSF69255 347 434 2.22E-33 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 Pfam PF05954 Phage late control gene D protein (GPD) 30 322 5.3E-84 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 SUPERFAMILY SSF69279 188 347 1.19E-36 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 Gene3D G3DSA:2.40.50.230 352 434 1.1E-37 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 Gene3D G3DSA:3.55.50.10 96 187 2.7E-33 T 29-03-2018 AM474_RS31460 448b0e031250fb6016c64aa0868e43bd 668 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 560 583 1.1E-6 T 29-03-2018 IPR010609 Gp5, C-terminal AM474_RS11660 cc1828d4112b00cf2bb26195300884a4 328 Gene3D G3DSA:3.40.718.10 2 327 1.9E-132 T 29-03-2018 AM474_RS11660 cc1828d4112b00cf2bb26195300884a4 328 SUPERFAMILY SSF53659 3 326 3.9E-113 T 29-03-2018 AM474_RS11660 cc1828d4112b00cf2bb26195300884a4 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 324 36.624 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM474_RS11660 cc1828d4112b00cf2bb26195300884a4 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 7.1E-129 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM474_RS11660 cc1828d4112b00cf2bb26195300884a4 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 320 7.6E-110 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM474_RS18210 0430f341e63e3ad55022e3149176f7e6 270 Pfam PF00248 Aldo/keto reductase family 22 219 2.6E-30 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS18210 0430f341e63e3ad55022e3149176f7e6 270 Gene3D G3DSA:3.20.20.100 5 270 2.2E-50 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS18210 0430f341e63e3ad55022e3149176f7e6 270 SUPERFAMILY SSF51430 10 267 1.96E-47 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 SMART SM00862 145 216 9.3E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 Gene3D G3DSA:1.10.10.10 121 221 6.6E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 Gene3D G3DSA:3.40.50.2300 1 120 2.7E-30 T 29-03-2018 AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 SMART SM00448 1 112 1.3E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 SUPERFAMILY SSF52172 1 118 4.13E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 1.1E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 Pfam PF00072 Response regulator receiver domain 3 112 3.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19350 bb80baca4ca0365242d3cbcdc194991a 221 SUPERFAMILY SSF46894 125 216 2.24E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 Gene3D G3DSA:1.10.530.10 234 391 3.3E-36 T 29-03-2018 AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 Pfam PF10135 Rod binding protein 56 107 1.6E-16 T 29-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 19 385 1.9E-84 T 29-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 248 386 2.3E-22 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 SMART SM00047 229 389 2.9E-38 T 29-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 AM474_RS24300 33e0b783779654d95927b2aa725d57fa 400 SUPERFAMILY SSF53955 204 279 8.62E-5 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 322 7.4E-111 T 29-03-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 189 202 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 Gene3D G3DSA:3.40.640.10 48 221 7.9E-26 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 Pfam PF00155 Aminotransferase class I and II 54 308 1.1E-30 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 SUPERFAMILY SSF53383 12 313 2.07E-56 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS25445 f38bc2a11730b04f767f037ac36be8b9 331 Gene3D G3DSA:3.90.1150.10 222 320 3.0E-10 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 SUPERFAMILY SSF53927 5 146 7.03E-49 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 9 364 1.5E-116 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 148 367 1.3E-53 T 29-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 101 1.2E-19 T 29-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 Gene3D G3DSA:3.40.430.10 127 366 1.2E-69 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 SUPERFAMILY SSF53597 147 365 1.11E-55 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 Gene3D G3DSA:3.40.140.10 2 126 1.8E-34 T 29-03-2018 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 PIRSF PIRSF006769 1 370 3.3E-128 T 29-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 AM474_RS10150 e4b5e83157401252deec8cbb70887859 373 Pfam PF01872 RibD C-terminal domain 149 363 3.0E-47 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM474_RS18360 23eeb7aa138d043bc9ec1c224648db2e 236 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 186 1.7E-37 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM474_RS18360 23eeb7aa138d043bc9ec1c224648db2e 236 SUPERFAMILY SSF159594 28 189 2.17E-21 T 29-03-2018 AM474_RS18360 23eeb7aa138d043bc9ec1c224648db2e 236 Gene3D G3DSA:3.40.50.10610 17 204 7.6E-33 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 9 583 1.1E-285 T 29-03-2018 IPR011918 ABC transporter, ATP-binding/permease protein AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 SUPERFAMILY SSF52540 338 583 1.04E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 SUPERFAMILY SSF90123 16 323 5.36E-73 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 Gene3D G3DSA:3.40.50.300 342 579 4.6E-73 T 29-03-2018 AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 Gene3D G3DSA:1.20.1560.10 6 331 4.8E-68 T 29-03-2018 AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 Pfam PF00664 ABC transporter transmembrane region 30 297 1.1E-50 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 SMART SM00382 372 574 1.4E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24485 30bce8c6b2ae0165b78023bc2317bd11 588 Pfam PF00005 ABC transporter 364 512 9.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18305 687ce0a6529a4a7016b8b6157cb5e18d 482 Pfam PF02321 Outer membrane efflux protein 244 437 1.8E-30 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS18305 687ce0a6529a4a7016b8b6157cb5e18d 482 Pfam PF02321 Outer membrane efflux protein 36 217 2.5E-24 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS18305 687ce0a6529a4a7016b8b6157cb5e18d 482 Gene3D G3DSA:1.20.1600.10 16 443 2.2E-74 T 29-03-2018 AM474_RS18305 687ce0a6529a4a7016b8b6157cb5e18d 482 SUPERFAMILY SSF56954 32 451 5.23E-91 T 29-03-2018 AM474_RS18305 687ce0a6529a4a7016b8b6157cb5e18d 482 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 29 452 1.2E-142 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 6.9E-43 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 SUPERFAMILY SSF53901 277 400 3.12E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 SUPERFAMILY SSF53901 4 276 8.02E-87 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 PIRSF PIRSF000429 1 401 1.3E-135 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 6.2E-79 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 Gene3D G3DSA:3.40.47.10 279 398 2.1E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 3.3E-223 T 29-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 399 2.7E-138 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS13645 852e5ddda920523849ec3e3513a66b8c 401 Gene3D G3DSA:3.40.47.10 1 278 2.3E-58 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 Pfam PF01339 CheB methylesterase 154 330 2.0E-57 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 SMART SM00448 1 118 3.6E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 SUPERFAMILY SSF52172 2 104 1.42E-20 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 PIRSF PIRSF000876 1 335 6.1E-98 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 Gene3D G3DSA:3.40.50.2300 1 126 2.0E-22 T 29-03-2018 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 Gene3D G3DSA:3.40.50.180 144 335 4.1E-69 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 Pfam PF00072 Response regulator receiver domain 4 102 3.1E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 SUPERFAMILY SSF52738 151 334 1.96E-61 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS07875 4b90b4ba6d6527a6615579b5bb6488fd 335 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 335 32.552 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 SUPERFAMILY SSF89000 424 473 1.37E-13 T 29-03-2018 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 44 585 54.366 T 29-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 SUPERFAMILY SSF110921 479 583 2.22E-33 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 76 92 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 279 292 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 Pfam PF00682 HMGL-like 69 349 2.1E-77 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 Pfam PF08502 LeuA allosteric (dimerisation) domain 458 583 1.1E-28 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 SUPERFAMILY SSF51569 58 366 1.83E-98 T 29-03-2018 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 SMART SM00917 458 584 7.7E-31 T 29-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 43 584 1.3E-241 T 29-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS08660 481152020dec95c53c02fc0229d9bd6f 592 Gene3D G3DSA:3.20.20.70 46 412 1.6E-110 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Gene3D G3DSA:3.30.450.20 404 526 8.1E-27 T 29-03-2018 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Pfam PF08447 PAS fold 316 385 4.1E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00086 349 392 1.0E-6 T 29-03-2018 IPR001610 PAC motif AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00086 472 514 0.0021 T 29-03-2018 IPR001610 PAC motif AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SUPERFAMILY SSF55785 391 511 4.54E-24 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Gene3D G3DSA:3.20.20.450 694 945 3.0E-103 T 29-03-2018 IPR001633 EAL domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SUPERFAMILY SSF141868 701 948 7.72E-92 T 29-03-2018 IPR001633 EAL domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Pfam PF13426 PAS domain 411 512 2.8E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SUPERFAMILY SSF55785 319 394 2.79E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00052 696 941 9.3E-119 T 29-03-2018 IPR001633 EAL domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Pfam PF00990 Diguanylate cyclase, GGDEF domain 526 681 1.3E-41 T 29-03-2018 IPR000160 GGDEF domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SUPERFAMILY SSF55073 530 688 1.1E-42 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 526 684 9.9E-33 T 29-03-2018 IPR000160 GGDEF domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Pfam PF00563 EAL domain 703 936 4.9E-73 T 29-03-2018 IPR001633 EAL domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Gene3D G3DSA:3.30.450.20 331 403 2.9E-15 T 29-03-2018 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00091 277 342 46.0 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00091 400 466 2.6E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Gene3D G3DSA:3.30.450.20 271 330 1.3E-7 T 29-03-2018 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 Gene3D G3DSA:3.30.70.270 527 693 6.4E-55 T 29-03-2018 AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 521 6.5E-20 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 398 5.4E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS15545 bcd2c2d94ddc50864074ee7463416a54 950 SMART SM00267 514 686 5.0E-52 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24010 772ed62959bb4a660ed5fe597185b52b 251 SMART SM00953 71 208 1.1E-36 T 29-03-2018 IPR014914 RES domain AM474_RS24010 772ed62959bb4a660ed5fe597185b52b 251 Pfam PF08808 RES domain 63 207 2.3E-25 T 29-03-2018 IPR014914 RES domain AM474_RS24325 c8703c9d10542c52556be76e1dc27a04 346 Gene3D G3DSA:3.40.47.10 182 335 2.9E-32 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS24325 c8703c9d10542c52556be76e1dc27a04 346 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 334 1.1E-25 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS24325 c8703c9d10542c52556be76e1dc27a04 346 Gene3D G3DSA:3.40.47.10 7 181 4.2E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS24325 c8703c9d10542c52556be76e1dc27a04 346 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 3.7E-7 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS24325 c8703c9d10542c52556be76e1dc27a04 346 SUPERFAMILY SSF53901 4 334 1.86E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 Pfam PF00591 Glycosyl transferase family, a/b domain 75 329 9.5E-102 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 38.441 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 64 4.0E-19 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 7 338 4.0E-121 T 29-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 SUPERFAMILY SSF47648 1 67 2.88E-21 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 Gene3D G3DSA:1.20.970.10 1 70 1.3E-23 T 29-03-2018 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 Gene3D G3DSA:3.40.1030.10 73 349 2.2E-97 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS11395 7c0bb481fd65a00b1a42ebd420899cac 349 SUPERFAMILY SSF52418 75 340 1.57E-87 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 4.3E-63 T 29-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.3E-130 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 PIRSF PIRSF000116 201 332 8.3E-15 T 29-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 PIRSF PIRSF000116 2 203 5.2E-45 T 29-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF51735 1 182 6.95E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 SUPERFAMILY SSF48179 183 332 1.55E-69 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.4E-75 T 29-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.862 T 29-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM474_RS19790 2afdc47e3ac5616a06a5e098e3a4b0d2 338 Gene3D G3DSA:1.10.1040.10 60 330 5.1E-114 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS06770 128699c7f42060ccb8f3ddceda86bb0d 198 Pfam PF00877 NlpC/P60 family 75 181 4.6E-32 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM474_RS06770 128699c7f42060ccb8f3ddceda86bb0d 198 Gene3D G3DSA:3.90.1720.10 22 109 9.0E-17 T 29-03-2018 AM474_RS06770 128699c7f42060ccb8f3ddceda86bb0d 198 SUPERFAMILY SSF54001 58 185 2.94E-43 T 29-03-2018 AM474_RS06770 128699c7f42060ccb8f3ddceda86bb0d 198 Gene3D G3DSA:2.30.260.10 110 186 7.4E-22 T 29-03-2018 AM474_RS14495 6d9d28f719c1ce00ebf6272ed2bc9d53 77 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 74 3.0E-29 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM474_RS14495 6d9d28f719c1ce00ebf6272ed2bc9d53 77 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 8.9E-25 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 Pfam PF02416 mttA/Hcf106 family 4 49 4.3E-8 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.7E-19 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.7E-19 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.7E-19 T 29-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 76 2.8E-24 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM474_RS17525 3255ad3f542a61f4332dfb510317209a 141 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 116 16.967 T 29-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AM474_RS00385 4005bd0ef80e7c32e66562e4790b45bd 294 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 71 273 1.8E-56 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00385 4005bd0ef80e7c32e66562e4790b45bd 294 Gene3D G3DSA:3.90.850.10 22 280 4.4E-64 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00385 4005bd0ef80e7c32e66562e4790b45bd 294 SUPERFAMILY SSF56529 56 275 1.1E-59 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 502 2.0E-164 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PIRSF PIRSF002869 1 512 2.2E-175 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.0E-86 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 Pfam PF03023 MviN-like protein 28 476 9.9E-155 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS20535 92863eb17fe7ad27a59701830b7c3b47 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.51 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS11345 eaf8eb7eb462cd02b843d5f4269333ca 322 Gene3D G3DSA:3.20.20.70 4 317 1.2E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS11345 eaf8eb7eb462cd02b843d5f4269333ca 322 SUPERFAMILY SSF51412 6 305 8.97E-59 T 29-03-2018 AM474_RS11345 eaf8eb7eb462cd02b843d5f4269333ca 322 Pfam PF03060 Nitronate monooxygenase 89 302 1.5E-27 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 73.13 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 SUPERFAMILY SSF52304 4 145 1.27E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-61 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 PIRSF PIRSF001399 1 147 2.6E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 142 6.6E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 Gene3D G3DSA:3.40.50.9100 1 147 3.9E-66 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS13560 3099c1f9f66af573283a2fa2e540345a 148 Pfam PF01220 Dehydroquinase class II 5 140 1.2E-61 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 32.164 T 29-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 Gene3D G3DSA:3.20.20.140 71 386 9.3E-82 T 29-03-2018 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 Pfam PF01979 Amidohydrolase family 193 419 1.3E-13 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 SUPERFAMILY SSF51338 1 55 4.32E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 SUPERFAMILY SSF51338 367 422 4.32E-24 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 Gene3D G3DSA:2.30.40.10 1 70 5.6E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 6.8E-88 T 29-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS12700 7f9d746b724b8b6f86dc4d2e5123a08b 423 SUPERFAMILY SSF51556 56 367 4.4E-88 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS09175 d7b18f6228a636d41f91673eec0835f9 220 Gene3D G3DSA:1.10.3720.10 10 213 1.2E-30 T 29-03-2018 AM474_RS09175 d7b18f6228a636d41f91673eec0835f9 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 213 6.1E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS09175 d7b18f6228a636d41f91673eec0835f9 220 SUPERFAMILY SSF161098 12 203 4.84E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 SUPERFAMILY SSF161098 337 523 8.11E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 Gene3D G3DSA:1.10.3720.10 293 537 4.9E-24 T 29-03-2018 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 Gene3D G3DSA:1.10.3720.10 33 275 9.2E-22 T 29-03-2018 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 SUPERFAMILY SSF161098 77 262 1.96E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 361 529 8.5E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13845 f553f0c67a4da148d0c6b83c4fa45e0a 537 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 270 2.7E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 Gene3D G3DSA:1.20.58.340 270 338 1.1E-14 T 29-03-2018 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 Pfam PF01544 CorA-like Mg2+ transporter protein 49 332 8.2E-50 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 SUPERFAMILY SSF144083 275 336 2.48E-15 T 29-03-2018 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 Gene3D G3DSA:1.20.58.340 151 269 1.0E-8 T 29-03-2018 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 Gene3D G3DSA:3.30.460.20 5 149 6.0E-13 T 29-03-2018 AM474_RS28665 5f36c4b119425892c230d639ff9ec03e 340 SUPERFAMILY SSF143865 13 272 2.09E-33 T 29-03-2018 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 86 177 6.6E-40 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 Gene3D G3DSA:3.90.930.12 5 85 7.9E-26 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.3E-76 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 90 164 8.0E-19 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 Pfam PF00347 Ribosomal protein L6 12 82 2.5E-16 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 29-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 1 82 1.12E-22 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 SUPERFAMILY SSF56053 83 177 3.17E-36 T 29-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.095 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 PIRSF PIRSF002162 1 177 1.5E-46 T 29-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS11095 498ad56a7234b8f83975d6c9b437e371 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-34 T 29-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM474_RS19255 f8df4451a5130527f7870e09e5d0d801 160 SUPERFAMILY SSF55729 1 158 5.66E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS19255 f8df4451a5130527f7870e09e5d0d801 160 Gene3D G3DSA:3.40.630.30 1 160 3.1E-29 T 29-03-2018 AM474_RS19255 f8df4451a5130527f7870e09e5d0d801 160 Pfam PF00583 Acetyltransferase (GNAT) family 36 133 1.4E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 2.3E-17 T 29-03-2018 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.3E-17 T 29-03-2018 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 2.3E-17 T 29-03-2018 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.3E-17 T 29-03-2018 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 SUPERFAMILY SSF54373 182 281 3.45E-13 T 29-03-2018 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 SUPERFAMILY SSF51905 275 364 7.64E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 SUPERFAMILY SSF51905 10 178 7.64E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 Gene3D G3DSA:3.50.50.60 1 390 4.0E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23635 c8239d74171b060e2749f58a48e31458 409 Pfam PF01494 FAD binding domain 9 323 1.2E-24 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 Pfam PF13537 Glutamine amidotransferase domain 48 170 3.2E-43 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 537 2.0E-176 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 PIRSF PIRSF001589 1 610 2.6E-140 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 Pfam PF00733 Asparagine synthase 242 604 4.3E-82 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 Gene3D G3DSA:3.40.50.620 224 609 2.9E-58 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 SUPERFAMILY SSF56235 1 226 9.44E-62 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 Gene3D G3DSA:3.60.20.10 1 223 1.7E-52 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 SUPERFAMILY SSF52402 457 578 7.33E-60 T 29-03-2018 AM474_RS14545 bee42c859b57f5c4f027245f836f96f7 610 SUPERFAMILY SSF52402 231 399 7.33E-60 T 29-03-2018 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 SUPERFAMILY SSF53850 20 348 4.12E-77 T 29-03-2018 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 Gene3D G3DSA:3.40.190.10 198 317 2.3E-16 T 29-03-2018 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 Gene3D G3DSA:3.40.190.10 17 197 2.7E-22 T 29-03-2018 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PIRSF PIRSF019574 4 352 8.5E-97 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 147 161 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 170 189 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 296 322 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 207 226 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 8.5E-39 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13270 b1fd6d902f388b2e4399b1b493c59246 353 Pfam PF13416 Bacterial extracellular solute-binding protein 36 310 7.0E-27 T 29-03-2018 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-6 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 Pfam PF00293 NUDIX domain 7 146 8.9E-26 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 SUPERFAMILY SSF55811 4 154 1.76E-29 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 Gene3D G3DSA:3.90.79.10 1 157 2.6E-30 T 29-03-2018 AM474_RS13040 49f0f22881f30d9fd8e06a20036e09ad 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 29-03-2018 IPR022927 RNA pyrophosphohydrolase RppH AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 SUPERFAMILY SSF53850 92 302 6.29E-45 T 29-03-2018 AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 Pfam PF03466 LysR substrate binding domain 96 299 3.1E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 Gene3D G3DSA:3.40.190.10 188 275 5.1E-16 T 29-03-2018 AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 SUPERFAMILY SSF46785 5 89 3.74E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 Gene3D G3DSA:3.40.190.10 99 187 5.4E-18 T 29-03-2018 AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 6.0E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12300 fe28731749234df7e9cdda784a31ebbf 308 Gene3D G3DSA:1.10.10.10 8 98 5.0E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88946 18 94 8.63E-14 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF08281 Sigma-70, region 4 118 168 1.7E-12 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.1740.10 3 87 1.1E-12 T 29-03-2018 AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 Pfam PF04542 Sigma-70 region 2 20 83 1.9E-13 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 SUPERFAMILY SSF88659 103 173 6.73E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 Gene3D G3DSA:1.10.10.10 95 179 1.2E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31720 56c667cf0d2996aa326ace22d6ea9283 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 169 4.4E-22 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS09035 80233334f41cdea7d77da66d1104e746 315 SUPERFAMILY SSF51735 6 313 7.49E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS09035 80233334f41cdea7d77da66d1104e746 315 Gene3D G3DSA:3.40.50.720 139 296 5.5E-20 T 29-03-2018 AM474_RS09035 80233334f41cdea7d77da66d1104e746 315 Gene3D G3DSA:3.30.1780.10 4 138 7.6E-28 T 29-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AM474_RS09035 80233334f41cdea7d77da66d1104e746 315 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 309 1.1E-35 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM474_RS09035 80233334f41cdea7d77da66d1104e746 315 PIRSF PIRSF001439 1 315 1.6E-52 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 SUPERFAMILY SSF47741 92 163 2.22E-30 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 47 55 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 Gene3D G3DSA:1.10.150.120 83 168 4.0E-36 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 67 3.5E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 SUPERFAMILY SSF54292 9 96 5.11E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 Gene3D G3DSA:3.10.20.30 7 82 4.3E-26 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS28970 7070b8ee040c44145bee6eb812615a6b 170 Pfam PF01799 [2Fe-2S] binding domain 81 153 3.7E-31 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 Gene3D G3DSA:1.10.10.10 1 80 4.0E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 Gene3D G3DSA:3.40.190.10 88 178 8.2E-19 T 29-03-2018 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-25 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 Pfam PF03466 LysR substrate binding domain 91 295 3.4E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 SUPERFAMILY SSF53850 91 299 5.31E-39 T 29-03-2018 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 Gene3D G3DSA:3.40.190.10 179 270 6.2E-26 T 29-03-2018 AM474_RS18010 53d9b7d563c636a91602c0ee44e130cd 301 SUPERFAMILY SSF46785 2 83 1.02E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14530 54551836a2dd9f2a4d46dd60a9042809 182 SUPERFAMILY SSF56399 9 179 4.89E-56 T 29-03-2018 AM474_RS14530 54551836a2dd9f2a4d46dd60a9042809 182 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 5 179 35.114 T 29-03-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 AM474_RS14530 54551836a2dd9f2a4d46dd60a9042809 182 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 8 172 1.1E-36 T 29-03-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 AM474_RS18335 507bd714f8d95c3341faa3011fa05947 206 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 190 6.3E-70 T 29-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AM474_RS18335 507bd714f8d95c3341faa3011fa05947 206 SUPERFAMILY SSF53474 5 189 5.2E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS18335 507bd714f8d95c3341faa3011fa05947 206 Gene3D G3DSA:3.40.50.1820 4 196 7.1E-17 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.0E-27 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.0E-27 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.0E-27 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.0E-27 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 Gene3D G3DSA:3.90.226.10 12 194 3.5E-35 T 29-03-2018 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 32.828 T 29-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 SUPERFAMILY SSF52096 16 194 1.99E-54 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 Pfam PF00574 Clp protease 19 192 3.3E-64 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM474_RS05965 92a304ba989ae04d3d47bcd66e0a6032 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 29-03-2018 IPR033135 ClpP, histidine active site AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 1.9E-100 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.202 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 SUPERFAMILY SSF52374 3 280 7.82E-104 T 29-03-2018 AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 281 5.7E-98 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 Gene3D G3DSA:3.30.1300.10 177 282 3.5E-29 T 29-03-2018 AM474_RS00695 feee61d99f9d3c4a40c6902d598ae567 282 Gene3D G3DSA:3.40.50.620 1 176 1.5E-73 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:1.10.10.10 1 83 5.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF46785 1 80 2.42E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 89 176 9.6E-25 T 29-03-2018 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 Pfam PF03466 LysR substrate binding domain 87 291 1.7E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 SUPERFAMILY SSF53850 88 293 2.31E-42 T 29-03-2018 AM474_RS07320 2e187bf80b538451f5ef5ce4c6379719 295 Gene3D G3DSA:3.40.190.10 177 267 5.2E-27 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:3.40.50.10860 63 188 3.0E-55 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 SUPERFAMILY SSF53223 4 194 2.81E-75 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 443 4.3E-86 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 370 381 6.6E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 6.6E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 6.6E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 6.6E-33 T 29-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:3.40.50.720 207 371 2.9E-45 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:1.10.285.10 4 62 2.0E-8 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Gene3D G3DSA:1.10.285.10 372 445 9.6E-29 T 29-03-2018 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 PIRSF PIRSF000185 20 445 5.4E-119 T 29-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 SUPERFAMILY SSF51735 200 444 8.74E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 SMART SM00839 202 443 1.4E-91 T 29-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 29-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS20400 18406430e477a6c77de8a5bcce1db1f0 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 4.4E-50 T 29-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 SUPERFAMILY SSF46894 171 241 3.74E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 ProSitePatterns PS00622 LuxR-type HTH domain signature. 195 222 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 Pfam PF03472 Autoinducer binding domain 26 162 6.2E-36 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 2.2E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 SMART SM00421 178 235 8.9E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 Gene3D G3DSA:1.10.10.10 180 241 9.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 Gene3D G3DSA:3.30.450.80 2 177 9.5E-40 T 29-03-2018 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 SUPERFAMILY SSF75516 9 172 3.79E-39 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06795 420e996a0adeb596fc5d923200c7aaaa 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 2.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 PIRSF PIRSF005917 1 281 3.5E-101 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 Gene3D G3DSA:3.30.950.10 115 234 1.1E-39 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 205 1.7E-29 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 29-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 277 9.9E-91 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 SUPERFAMILY SSF53790 4 224 4.32E-80 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 Gene3D G3DSA:3.40.1010.10 3 114 1.9E-38 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS21275 4203539bf1d213292268f21270d8fbe3 282 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 226 36.52 T 29-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS27040 a08d8d99a1a0c71a780c75428c6a9de1 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 25.887 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM474_RS27040 a08d8d99a1a0c71a780c75428c6a9de1 93 Gene3D G3DSA:2.60.120.10 3 92 1.0E-36 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS27040 a08d8d99a1a0c71a780c75428c6a9de1 93 SUPERFAMILY SSF51182 1 92 2.14E-36 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS27040 a08d8d99a1a0c71a780c75428c6a9de1 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 4.0E-37 T 29-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase AM474_RS08130 3d5e9d4ff5ce9885d86523dd91e405ba 64 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 8.0E-19 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 2.0E-49 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 4.6E-30 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:1.10.540.10 4 119 6.3E-31 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 SUPERFAMILY SSF47203 229 380 2.9E-56 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 117 5.2E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:2.40.110.10 120 216 8.7E-40 T 29-03-2018 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 PIRSF PIRSF016578 3 83 3.8E-7 T 29-03-2018 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 PIRSF PIRSF016578 109 365 3.4E-13 T 29-03-2018 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 SUPERFAMILY SSF56645 6 243 1.57E-78 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS27330 1ca7458fb24cfd4e862ba8bb1581a242 384 Gene3D G3DSA:1.20.140.10 217 384 8.5E-63 T 29-03-2018 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Gene3D G3DSA:1.10.287.130 224 288 2.6E-6 T 29-03-2018 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Pfam PF16750 Sensor domain of 2-component histidine kinase 38 148 1.2E-36 T 29-03-2018 IPR031930 2-component histidine kinase, sensor domain AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SUPERFAMILY SSF47384 217 292 8.44E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 292 2.7E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Gene3D G3DSA:3.30.565.10 325 446 7.7E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SMART SM00304 177 233 1.6E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 444 1.8E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SMART SM00387 338 446 1.1E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SUPERFAMILY SSF55874 282 444 1.57E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SUPERFAMILY SSF158472 177 229 1.31E-5 T 29-03-2018 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 4.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 4.0E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 Pfam PF00672 HAMP domain 177 229 2.3E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01290 dfb9cbe91cb2837c604065fa5193c0dc 446 SMART SM00388 234 293 4.4E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS06430 c4a090a3e276c9090f045ca7addcd625 205 SUPERFAMILY SSF54621 2 176 1.19E-63 T 29-03-2018 IPR010495 Haem-binding HasA AM474_RS06430 c4a090a3e276c9090f045ca7addcd625 205 Pfam PF06438 Heme-binding protein A (HasA) 1 205 2.7E-77 T 29-03-2018 IPR010495 Haem-binding HasA AM474_RS06430 c4a090a3e276c9090f045ca7addcd625 205 PIRSF PIRSF019876 1 205 2.7E-93 T 29-03-2018 IPR010495 Haem-binding HasA AM474_RS06430 c4a090a3e276c9090f045ca7addcd625 205 Gene3D G3DSA:3.30.1500.10 1 181 8.9E-61 T 29-03-2018 IPR010495 Haem-binding HasA AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 Pfam PF09084 NMT1/THI5 like 57 252 1.0E-15 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 SMART SM00062 30 248 3.8E-23 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 SUPERFAMILY SSF53850 29 258 1.07E-46 T 29-03-2018 AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 310 7.2E-63 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 Gene3D G3DSA:3.40.190.10 137 314 1.4E-38 T 29-03-2018 AM474_RS00805 e5ccb0700e201e177a1fd7a84cfc19d7 319 Gene3D G3DSA:3.40.190.10 25 136 3.3E-10 T 29-03-2018 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.5E-56 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 SMART SM01004 10 333 3.6E-240 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 1.5E-136 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 SUPERFAMILY SSF51569 8 334 4.54E-141 T 29-03-2018 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 PIRSF PIRSF001415 3 336 2.3E-149 T 29-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 Gene3D G3DSA:3.20.20.70 1 337 5.0E-149 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS16610 27bc69e242d58c65006826ba0f00904c 337 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 29-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM474_RS11890 1d8de5ede46d0aa326c04a7e5fe03b56 255 Gene3D G3DSA:3.40.50.150 7 255 8.2E-30 T 29-03-2018 AM474_RS11890 1d8de5ede46d0aa326c04a7e5fe03b56 255 Pfam PF08241 Methyltransferase domain 47 135 3.2E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS11890 1d8de5ede46d0aa326c04a7e5fe03b56 255 SUPERFAMILY SSF53335 15 207 5.27E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 SUPERFAMILY SSF51338 373 446 2.25E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 SUPERFAMILY SSF51338 4 58 2.25E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 SUPERFAMILY SSF51556 58 372 4.22E-100 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 Gene3D G3DSA:3.20.20.140 69 354 5.9E-60 T 29-03-2018 AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 Gene3D G3DSA:2.30.40.10 1 68 2.0E-14 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 Gene3D G3DSA:2.30.40.10 355 434 7.9E-4 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14070 4365d23716b76b0f09fd9eb2590250b5 449 Pfam PF01979 Amidohydrolase family 55 418 3.2E-60 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 182 278 2.7E-12 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 Gene3D G3DSA:1.20.140.10 279 449 4.7E-35 T 29-03-2018 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 444 1.4E-28 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 SUPERFAMILY SSF56645 61 299 1.69E-36 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 SUPERFAMILY SSF47203 295 447 2.74E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 Gene3D G3DSA:2.40.110.10 173 278 6.1E-18 T 29-03-2018 AM474_RS09735 2c74b907d78cbdce30252e0ce526d2e7 549 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 403 422 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS14195 fcb5c342754e547f9c4ea334bad63f8c 195 SUPERFAMILY SSF52833 1 194 9.79E-48 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14195 fcb5c342754e547f9c4ea334bad63f8c 195 Pfam PF01323 DSBA-like thioredoxin domain 4 194 9.0E-46 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM474_RS14195 fcb5c342754e547f9c4ea334bad63f8c 195 PIRSF PIRSF006386 1 195 4.9E-68 T 29-03-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 AM474_RS14195 fcb5c342754e547f9c4ea334bad63f8c 195 Gene3D G3DSA:3.40.30.10 2 195 1.6E-51 T 29-03-2018 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF46689 4 74 3.28E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.4E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.4E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 SUPERFAMILY SSF48498 82 209 2.0E-39 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 Gene3D G3DSA:1.10.357.10 49 212 4.2E-33 T 29-03-2018 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 Gene3D G3DSA:1.10.10.60 2 48 1.3E-17 T 29-03-2018 AM474_RS04240 926d1f4405dc0193cea5c601961b432d 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.1E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 Gene3D G3DSA:1.20.1250.20 196 385 9.1E-4 T 29-03-2018 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 Pfam PF07690 Major Facilitator Superfamily 21 350 1.3E-30 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 SUPERFAMILY SSF103473 1 382 7.98E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 PRINTS PR01035 Tetracycline resistance protein signature 18 34 7.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 PRINTS PR01035 Tetracycline resistance protein signature 133 155 7.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 PRINTS PR01035 Tetracycline resistance protein signature 246 266 7.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 PRINTS PR01035 Tetracycline resistance protein signature 301 321 7.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24445 3acd2dd33ce9e2b1312329f93ecbf1a9 385 Gene3D G3DSA:1.20.1250.20 5 195 2.4E-23 T 29-03-2018 AM474_RS04560 404149dfdaef148fa0461012b1e48e37 326 Gene3D G3DSA:3.40.50.300 25 191 1.4E-25 T 29-03-2018 AM474_RS04560 404149dfdaef148fa0461012b1e48e37 326 PIRSF PIRSF002849 1 326 2.9E-128 T 29-03-2018 AM474_RS04560 404149dfdaef148fa0461012b1e48e37 326 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 174 8.0E-64 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AM474_RS04560 404149dfdaef148fa0461012b1e48e37 326 SUPERFAMILY SSF52540 10 298 2.78E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04560 404149dfdaef148fa0461012b1e48e37 326 Gene3D G3DSA:1.10.8.300 208 323 1.6E-34 T 29-03-2018 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 33 314 1.1E-80 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 225 318 1.7E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 192 214 2.8E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 PRINTS PR00605 Class IC cytochrome C signature 150 161 2.8E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 PIRSF PIRSF000006 1 314 2.4E-106 T 29-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 Gene3D G3DSA:1.10.760.10 104 224 9.0E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 4.4E-23 T 29-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 229 307 2.8E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 140 214 5.6E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 55 78 2.47E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 120 219 2.47E-32 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26895 f6fca4d1ebe70dff01776022797e8420 318 SUPERFAMILY SSF46626 225 313 1.69E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Pfam PF13241 Putative NAD(P)-binding 6 115 5.2E-28 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Gene3D G3DSA:3.30.950.10 342 463 1.5E-42 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 2.2E-54 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Gene3D G3DSA:3.40.1010.10 216 341 1.1E-39 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 2.2E-7 T 29-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 3.5E-96 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 SUPERFAMILY SSF75615 114 210 5.36E-28 T 29-03-2018 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Gene3D G3DSA:1.10.8.210 151 208 3.5E-21 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 54.726 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 SUPERFAMILY SSF51735 1 113 1.15E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 SUPERFAMILY SSF53790 214 459 3.93E-84 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Gene3D G3DSA:3.40.50.720 3 120 4.2E-25 T 29-03-2018 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 8.2E-89 T 29-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 PIRSF PIRSF036426 1 465 4.9E-210 T 29-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 9.5E-22 T 29-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS00895 0ca6c751f59af8a238dab1ab23c3f7c4 465 Gene3D G3DSA:3.30.160.110 121 148 6.8E-16 T 29-03-2018 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 Pfam PF00263 Bacterial type II and III secretion system protein 345 505 1.1E-40 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 450 483 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 392 407 7.7E-36 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 190 207 7.7E-36 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 483 502 7.7E-36 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 275 295 7.7E-36 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 358 377 7.7E-36 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 Pfam PF03958 Bacterial type II/III secretion system short domain 178 272 1.0E-14 T 29-03-2018 IPR005644 NolW-like AM474_RS27800 6c4cc9d1f8b596f4fd345f740826ca29 600 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 30 505 2.0E-162 T 29-03-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 AM474_RS30650 2504458adc1176cc5a25bc8f7092782c 323 Gene3D G3DSA:1.10.443.10 100 298 2.8E-26 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS30650 2504458adc1176cc5a25bc8f7092782c 323 Gene3D G3DSA:1.10.150.130 1 99 2.7E-10 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS30650 2504458adc1176cc5a25bc8f7092782c 323 Pfam PF00589 Phage integrase family 134 295 3.4E-13 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS30650 2504458adc1176cc5a25bc8f7092782c 323 SUPERFAMILY SSF56349 117 299 2.94E-40 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS30650 2504458adc1176cc5a25bc8f7092782c 323 SUPERFAMILY SSF47823 7 97 7.85E-25 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AM474_RS21060 c4e3c46a57c666f929540d833cf00c17 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 40.385 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM474_RS21060 c4e3c46a57c666f929540d833cf00c17 286 Gene3D G3DSA:3.40.50.300 1 158 3.7E-11 T 29-03-2018 AM474_RS21060 c4e3c46a57c666f929540d833cf00c17 286 PIRSF PIRSF005052 1 286 2.2E-114 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM474_RS21060 c4e3c46a57c666f929540d833cf00c17 286 SUPERFAMILY SSF52540 1 154 1.92E-13 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21060 c4e3c46a57c666f929540d833cf00c17 286 Pfam PF03668 P-loop ATPase protein family 1 285 1.2E-94 T 29-03-2018 IPR005337 RapZ-like family GO:0005524 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 51.041 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 PIRSF PIRSF001423 3 559 1.3E-297 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 29-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.1770.10 196 555 1.1E-165 T 29-03-2018 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Gene3D G3DSA:3.40.1770.10 10 152 5.6E-30 T 29-03-2018 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Pfam PF01175 Urocanase Rossmann-like domain 141 349 4.0E-88 T 29-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Pfam PF17392 Urocanase C-terminal domain 352 546 2.6E-92 T 29-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 Pfam PF17391 Urocanase N-terminal domain 12 138 9.7E-63 T 29-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17370 394d8212089590c79caf150cb2475e0a 559 SUPERFAMILY SSF111326 8 555 3.79E-264 T 29-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS28080 8b1f490aa3ba253d5ba167e349708427 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 7.6E-77 T 29-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM474_RS28080 8b1f490aa3ba253d5ba167e349708427 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 77.752 T 29-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein AM474_RS28080 8b1f490aa3ba253d5ba167e349708427 272 Gene3D G3DSA:3.40.50.300 15 265 5.4E-4 T 29-03-2018 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF46689 1 70 3.54E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 5.2E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 SUPERFAMILY SSF48498 78 179 1.25E-25 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.10.60 2 57 2.3E-14 T 29-03-2018 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 Gene3D G3DSA:1.10.357.10 58 180 4.9E-16 T 29-03-2018 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.9E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04900 1dd37db6e431af269a09737f11ed3249 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.9E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS15340 18663f7b5d7c1398f5206fe0f20cd400 155 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 38 153 2.4E-46 T 29-03-2018 AM474_RS15340 18663f7b5d7c1398f5206fe0f20cd400 155 SUPERFAMILY SSF89872 27 155 3.66E-50 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM474_RS15340 18663f7b5d7c1398f5206fe0f20cd400 155 PIRSF PIRSF009103 1 155 8.0E-68 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM474_RS15340 18663f7b5d7c1398f5206fe0f20cd400 155 Gene3D G3DSA:3.40.1420.10 30 148 3.1E-36 T 29-03-2018 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 SUPERFAMILY SSF51735 117 287 8.97E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 SMART SM00829 16 334 1.3E-11 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 Gene3D G3DSA:3.40.50.720 144 300 5.3E-23 T 29-03-2018 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 1.4E-177 T 29-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 Gene3D G3DSA:3.90.180.10 1 143 1.3E-33 T 29-03-2018 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 SUPERFAMILY SSF50129 9 137 1.0E-32 T 29-03-2018 IPR011032 GroES-like AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 3.9E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM474_RS07170 83db1c8e85b2b8c97aa4037572b3aaa3 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 2.5E-24 T 29-03-2018 AM474_RS08445 0a679accdcaefae7816fbe1fb9129610 116 Pfam PF11171 Protein of unknown function (DUF2958) 5 115 1.3E-41 T 29-03-2018 IPR021341 Protein of unknown function DUF2958 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 320 1.5E-49 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Gene3D G3DSA:3.30.70.20 356 384 7.8E-7 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 SUPERFAMILY SSF51395 2 320 1.03E-75 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Gene3D G3DSA:3.20.20.70 2 330 6.4E-53 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Gene3D G3DSA:3.30.70.20 385 419 0.0043 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 383 394 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Pfam PF14697 4Fe-4S dicluster domain 339 401 3.9E-22 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 SUPERFAMILY SSF54862 318 402 3.52E-13 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Gene3D G3DSA:3.30.70.20 331 355 0.0012 T 29-03-2018 AM474_RS12500 276487b328baa4095bb08f6f5876e208 425 Pfam PF01180 Dihydroorotate dehydrogenase 5 306 1.1E-26 T 29-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM474_RS04370 78cd30d6bfad44c993df279ff032d902 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 2.0E-21 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AM474_RS04370 78cd30d6bfad44c993df279ff032d902 73 SUPERFAMILY SSF50182 22 72 2.29E-16 T 29-03-2018 IPR010920 LSM domain AM474_RS04370 78cd30d6bfad44c993df279ff032d902 73 Gene3D G3DSA:2.30.30.100 22 72 6.0E-27 T 29-03-2018 AM474_RS18000 7af714b5a01fd839d6b28619256acb45 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.7E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18000 7af714b5a01fd839d6b28619256acb45 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.7E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18000 7af714b5a01fd839d6b28619256acb45 309 Pfam PF00106 short chain dehydrogenase 16 216 7.5E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18000 7af714b5a01fd839d6b28619256acb45 309 Gene3D G3DSA:3.40.50.720 1 308 2.0E-52 T 29-03-2018 AM474_RS18000 7af714b5a01fd839d6b28619256acb45 309 SUPERFAMILY SSF51735 8 274 5.83E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 SUPERFAMILY SSF56176 497 569 3.54E-8 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 574 51.578 T 29-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 SMART SM01091 492 571 1.3E-12 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.1E-56 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Gene3D G3DSA:3.30.465.10 495 568 9.0E-9 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF03471 Transporter associated domain 495 569 1.4E-10 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Pfam PF02080 TrkA-C domain 418 483 2.3E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 SUPERFAMILY SSF116726 411 483 3.53E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS18050 b3d294da9968eef79b4122fe4ba6e12f 580 Gene3D G3DSA:3.30.70.1450 413 489 2.5E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 Gene3D G3DSA:3.20.20.100 3 318 1.1E-97 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 PRINTS PR00069 Aldo-keto reductase signature 45 69 1.6E-5 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 PRINTS PR00069 Aldo-keto reductase signature 142 159 1.6E-5 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 PRINTS PR00069 Aldo-keto reductase signature 111 129 1.6E-5 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 Pfam PF00248 Aldo/keto reductase family 15 311 3.4E-72 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS27920 43d0817c2844df8d02f390d35170c1fa 323 SUPERFAMILY SSF51430 1 313 2.1E-99 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS31395 227d7a304f8e0c7621fcd2c81f0b5abd 1271 Pfam PF14331 ImcF-related N-terminal domain 115 352 1.4E-49 T 29-03-2018 IPR025743 ImcF-related, N-terminal domain AM474_RS31395 227d7a304f8e0c7621fcd2c81f0b5abd 1271 Gene3D G3DSA:1.20.5.170 221 1063 0.081 T 29-03-2018 AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 SUPERFAMILY SSF53187 332 409 9.43E-50 T 29-03-2018 AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 SUPERFAMILY SSF53187 31 220 9.43E-50 T 29-03-2018 AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 Pfam PF07687 Peptidase dimerisation domain 209 307 1.3E-19 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 PIRSF PIRSF037238 29 410 1.7E-102 T 29-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 Pfam PF01546 Peptidase family M20/M25/M40 107 407 2.9E-31 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 SUPERFAMILY SSF55031 212 323 3.14E-21 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS02195 55051986d3ccaafb4666adff43554a4e 412 Gene3D G3DSA:3.40.630.10 20 307 2.0E-54 T 29-03-2018 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 27 215 8.4E-45 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 Gene3D G3DSA:2.30.110.10 14 215 1.1E-52 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 SUPERFAMILY SSF50475 14 215 1.96E-52 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 181 215 1.4E-9 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 PIRSF PIRSF000190 2 215 1.2E-60 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS28825 aaa3bcddb4ebdeba35dd710370a8b561 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 123 1.3E-17 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 Gene3D G3DSA:2.40.170.20 262 804 2.4E-88 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 Pfam PF00593 TonB dependent receptor 322 803 3.3E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 SUPERFAMILY SSF56935 111 804 1.44E-141 T 29-03-2018 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 151 803 6.7E-122 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 SMART SM00965 57 108 5.9E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 Gene3D G3DSA:2.170.130.10 109 261 3.1E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS12335 cb4455f9677e42fb2d2ed07feb49d200 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 248 1.8E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00245 177 369 1.8E-75 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 SMART SM00228 105 176 1.6E-17 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.90.226.10 183 429 1.5E-69 T 29-03-2018 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF52096 196 370 1.06E-82 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF52096 42 123 1.06E-82 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:2.30.42.10 105 182 3.0E-19 T 29-03-2018 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 376 8.5E-106 T 29-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 Gene3D G3DSA:3.30.750.44 44 104 5.7E-17 T 29-03-2018 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF03572 Peptidase family S41 203 368 1.3E-57 T 29-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 SUPERFAMILY SSF50156 97 178 8.87E-20 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS17190 672c2f59b418df00fbbabc099caf4df0 436 Pfam PF13180 PDZ domain 105 177 1.5E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF01541 GIY-YIG catalytic domain 19 93 1.1E-9 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 604 29.679 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:1.10.150.20 551 608 6.7E-15 T 29-03-2018 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00465 17 98 1.4E-22 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF02151 UvrB/uvrC motif 214 234 6.7E-6 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF46600 190 243 3.27E-11 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF47781 518 606 1.24E-23 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:3.40.1440.10 6 101 1.4E-21 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Gene3D G3DSA:4.10.860.10 182 242 6.9E-13 T 29-03-2018 IPR001943 UVR domain GO:0005515 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 539 9.1E-53 T 29-03-2018 IPR001162 UvrC family homology region AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 586 3.0E-186 T 29-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SUPERFAMILY SSF82771 16 100 1.83E-21 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 Pfam PF14520 Helix-hairpin-helix domain 554 603 2.4E-11 T 29-03-2018 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00278 553 572 0.76 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS00755 9cbf8d1727a38453315aa417c37c9ccf 608 SMART SM00278 585 604 0.59 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS27825 21b33398badc4e9c87f1000cd1d67382 143 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 16 141 3.5E-48 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AM474_RS27825 21b33398badc4e9c87f1000cd1d67382 143 SUPERFAMILY SSF140591 24 123 1.26E-27 T 29-03-2018 AM474_RS27825 21b33398badc4e9c87f1000cd1d67382 143 Pfam PF09025 YopR, type III needle-polymerisation regulator 54 142 6.1E-23 T 29-03-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 Gene3D G3DSA:1.10.260.40 40 66 1.6E-15 T 29-03-2018 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 SUPERFAMILY SSF46689 5 86 1.7E-22 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.5E-18 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 Gene3D G3DSA:1.10.357.10 67 194 7.1E-10 T 29-03-2018 AM474_RS25515 9e1708530caf8ef6653356f002d74144 197 Gene3D G3DSA:1.10.10.60 1 39 7.0E-18 T 29-03-2018 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 SMART SM00244 21 185 4.4E-38 T 29-03-2018 IPR001107 Band 7 domain AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 161 179 5.7E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 28 50 5.7E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 180 201 5.7E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 PRINTS PR00721 Stomatin signature 115 132 5.7E-8 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 SUPERFAMILY SSF117892 53 192 7.45E-28 T 29-03-2018 IPR001107 Band 7 domain AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 PIRSF PIRSF005651 1 289 6.5E-94 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 154 285 1.4E-45 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 TIGRFAM TIGR01932 hflC: HflC protein 7 157 6.8E-40 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM474_RS18475 d6764fabb7c470a2657fca56f37e95a0 289 Pfam PF01145 SPFH domain / Band 7 family 25 200 1.7E-29 T 29-03-2018 IPR001107 Band 7 domain AM474_RS05085 aaac062292759f6c2e0fb61e4526008a 232 Pfam PF13489 Methyltransferase domain 47 199 1.9E-27 T 29-03-2018 AM474_RS05085 aaac062292759f6c2e0fb61e4526008a 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 1.4E-87 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM474_RS05085 aaac062292759f6c2e0fb61e4526008a 232 SUPERFAMILY SSF53335 12 226 5.88E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS05085 aaac062292759f6c2e0fb61e4526008a 232 Gene3D G3DSA:3.40.50.150 1 231 8.2E-52 T 29-03-2018 AM474_RS05085 aaac062292759f6c2e0fb61e4526008a 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 38.787 T 29-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM474_RS18065 d5e3c55cb67a5c9d14932388998bec24 278 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 276 6.3E-112 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM474_RS18065 d5e3c55cb67a5c9d14932388998bec24 278 SUPERFAMILY SSF53335 8 274 1.33E-89 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS18065 d5e3c55cb67a5c9d14932388998bec24 278 Gene3D G3DSA:3.40.50.150 1 278 5.7E-87 T 29-03-2018 AM474_RS18065 d5e3c55cb67a5c9d14932388998bec24 278 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 265 39.858 T 29-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AM474_RS08395 3cd2abc9f94dea784bf80121e6761ccc 664 Pfam PF11843 Protein of unknown function (DUF3363) 290 661 9.0E-145 T 29-03-2018 IPR021795 Protein of unknown function DUF3363 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF00072 Response regulator receiver domain 5 107 1.6E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SMART SM00448 3 118 5.4E-20 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52738 154 341 1.44E-71 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 341 41.843 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Pfam PF01339 CheB methylesterase 158 336 2.3E-62 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.2300 1 151 1.8E-27 T 29-03-2018 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 PIRSF PIRSF000876 1 345 6.1E-136 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 SUPERFAMILY SSF52172 1 107 6.4E-27 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS13905 6d9ce055698b4c5e1ccca8c94f78aaf6 349 Gene3D G3DSA:3.40.50.180 152 346 9.0E-79 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS14035 281c6ffbf9cd9bef94e3629af5eed7b5 316 Pfam PF00962 Adenosine/AMP deaminase 8 310 1.3E-72 T 29-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 AM474_RS14035 281c6ffbf9cd9bef94e3629af5eed7b5 316 Hamap MF_01962 Adenine deaminase. 4 316 86.737 T 29-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 AM474_RS14035 281c6ffbf9cd9bef94e3629af5eed7b5 316 Gene3D G3DSA:3.20.20.140 1 313 5.7E-78 T 29-03-2018 AM474_RS14035 281c6ffbf9cd9bef94e3629af5eed7b5 316 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 312 4.5E-110 T 29-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 AM474_RS14035 281c6ffbf9cd9bef94e3629af5eed7b5 316 SUPERFAMILY SSF51556 2 312 2.69E-84 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Pfam PF00512 His Kinase A (phospho-acceptor) domain 180 244 2.0E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SMART SM00387 288 399 5.6E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SUPERFAMILY SSF47384 163 245 1.04E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Gene3D G3DSA:1.10.287.130 169 238 8.9E-12 T 29-03-2018 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SMART SM00388 179 244 1.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SMART SM00448 419 526 2.5E-4 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 394 9.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.6E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Gene3D G3DSA:3.40.50.2300 416 540 9.3E-18 T 29-03-2018 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Pfam PF00072 Response regulator receiver domain 421 526 3.0E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 Gene3D G3DSA:3.30.565.10 239 398 1.4E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SUPERFAMILY SSF55874 234 394 2.62E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26035 40567ff2fec9cd325644fb4b792d88c2 540 SUPERFAMILY SSF52172 417 533 1.42E-15 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS00910 1ee4138acca8e6cadf4b340408743c65 208 Gene3D G3DSA:2.50.20.10 24 208 4.6E-46 T 29-03-2018 AM474_RS00910 1ee4138acca8e6cadf4b340408743c65 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 7 205 2.0E-32 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM474_RS00910 1ee4138acca8e6cadf4b340408743c65 208 SUPERFAMILY SSF89392 26 207 7.85E-53 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM474_RS00910 1ee4138acca8e6cadf4b340408743c65 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 36 198 6.5E-57 T 29-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM474_RS00910 1ee4138acca8e6cadf4b340408743c65 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 208 30.367 T 29-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 AM474_RS20975 3205b6f06ff956b6aa25efab63eeadeb 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.5E-29 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AM474_RS20975 3205b6f06ff956b6aa25efab63eeadeb 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.079 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AM474_RS20975 3205b6f06ff956b6aa25efab63eeadeb 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.6E-17 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AM474_RS20975 3205b6f06ff956b6aa25efab63eeadeb 96 SUPERFAMILY SSF141000 3 93 1.7E-28 T 29-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Gene3D G3DSA:3.30.70.870 405 500 3.2E-38 T 29-03-2018 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SUPERFAMILY SSF54980 411 488 1.22E-25 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Gene3D G3DSA:2.40.30.10 288 404 3.9E-31 T 29-03-2018 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SMART SM00838 614 701 7.2E-55 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 7.8E-65 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Gene3D G3DSA:3.40.50.300 1 287 1.1E-57 T 29-03-2018 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.6E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.6E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-17 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 705 0.0 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 2.5E-32 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Gene3D G3DSA:3.30.70.240 628 705 3.8E-30 T 29-03-2018 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 108.276 T 29-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Pfam PF14492 Elongation Factor G, domain II 411 485 2.4E-35 T 29-03-2018 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SMART SM00889 487 612 1.3E-66 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Pfam PF03144 Elongation factor Tu domain 2 331 398 7.1E-18 T 29-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Gene3D G3DSA:3.30.230.10 501 627 1.0E-36 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SUPERFAMILY SSF54211 486 612 8.09E-37 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SUPERFAMILY SSF54980 617 703 2.78E-29 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Pfam PF00679 Elongation factor G C-terminus 615 699 1.2E-30 T 29-03-2018 IPR000640 Elongation factor EFG, domain V-like AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 Pfam PF03764 Elongation factor G, domain IV 486 611 7.7E-42 T 29-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SUPERFAMILY SSF52540 6 287 1.21E-103 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11185 e5a6171ba21286c150aad69fe72ad241 706 SUPERFAMILY SSF50447 271 411 5.52E-35 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS27710 2b04936df0ed22b9aada18c603d24638 288 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 30 276 8.1E-75 T 29-03-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 AM474_RS27710 2b04936df0ed22b9aada18c603d24638 288 Pfam PF07201 HrpJ-like domain 54 217 2.9E-38 T 29-03-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 AM474_RS27710 2b04936df0ed22b9aada18c603d24638 288 SUPERFAMILY SSF140591 68 263 9.42E-55 T 29-03-2018 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 SUPERFAMILY SSF56645 5 242 6.68E-92 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:1.20.140.10 222 378 6.7E-55 T 29-03-2018 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 1.0E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 9.3E-37 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:1.10.540.10 1 121 1.6E-38 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 SUPERFAMILY SSF47203 230 378 7.09E-52 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.7E-27 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS21210 ac69f5f6c5cebf8c20b611f1041c6181 378 Gene3D G3DSA:2.40.110.10 122 221 3.3E-40 T 29-03-2018 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 255 2.1E-4 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 496 527 1.8E-6 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Pfam PF00005 ABC transporter 22 178 4.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Pfam PF00005 ABC transporter 295 445 5.2E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 SMART SM00382 30 228 2.4E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 SMART SM00382 303 494 1.5E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 SUPERFAMILY SSF52540 4 254 2.45E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 SUPERFAMILY SSF52540 289 516 9.03E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Gene3D G3DSA:3.40.50.300 265 530 2.7E-72 T 29-03-2018 AM474_RS29620 914e6dffd06771766892f8210d4af17d 536 Gene3D G3DSA:3.40.50.300 2 258 2.0E-71 T 29-03-2018 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 9.2E-13 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.2E-13 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 9.2E-13 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 7.7E-45 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 29-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 Gene3D G3DSA:1.20.5.220 118 135 9.5E-4 T 29-03-2018 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 SUPERFAMILY SSF81330 13 127 2.22E-35 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.757 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS20260 d35fe6af01d4294648fb4b7a7b2c973f 137 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 133 5.4E-48 T 29-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 SUPERFAMILY SSF47203 289 459 2.09E-47 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 43 158 4.2E-11 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Gene3D G3DSA:2.40.110.10 164 275 4.1E-25 T 29-03-2018 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.8E-17 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Gene3D G3DSA:1.10.540.10 36 163 2.9E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 3.7E-11 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 587 1.1E-34 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 3.0E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 SUPERFAMILY SSF56645 38 281 1.03E-55 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS10845 b7c44e444e6e4bcc50815fd0f96d8948 593 Gene3D G3DSA:1.20.140.10 298 467 1.3E-40 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 10 34 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 121 138 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 171 195 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 80 108 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 210 238 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 319 342 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 PRINTS PR01874 DNA repair protein radA signature 245 271 2.8E-94 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 427 5.5E-7 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 Pfam PF13481 AAA domain 76 219 1.2E-13 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF52540 66 286 2.01E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 SMART SM00382 88 241 2.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF54211 252 266 2.73E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 SUPERFAMILY SSF54211 300 452 2.73E-40 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 43.918 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.40.50.300 70 280 2.5E-42 T 29-03-2018 AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 Gene3D G3DSA:3.30.230.10 282 453 1.5E-29 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS20290 c98abf70e7bbddeb3967dd78a281e90c 453 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 2.0E-199 T 29-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM474_RS09255 c6b87c65dbd14189a2e764a68c47ed60 175 Pfam PF13503 Domain of unknown function (DUF4123) 17 143 3.0E-22 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 Pfam PF07702 UTRA domain 106 243 1.9E-36 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:3.40.1410.10 86 249 3.1E-42 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS17345 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF46785 20 89 2.04E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17345 a170810abb56561f1c869bcc18108523 250 SMART SM00345 26 85 1.1E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.0E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.0E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 21 249 1.6E-108 T 29-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 SUPERFAMILY SSF64288 73 248 2.2E-45 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS17345 a170810abb56561f1c869bcc18108523 250 SMART SM00866 106 243 2.8E-36 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS17345 a170810abb56561f1c869bcc18108523 250 Gene3D G3DSA:1.10.10.10 11 85 5.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17345 a170810abb56561f1c869bcc18108523 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 9.5E-20 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 Gene3D G3DSA:3.30.70.20 46 106 8.1E-9 T 29-03-2018 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 Gene3D G3DSA:3.30.70.20 18 45 2.8E-10 T 29-03-2018 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-18 T 29-03-2018 IPR000813 7Fe ferredoxin GO:0009055 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 9.1E-24 T 29-03-2018 IPR022569 Ferredoxin, C-terminal AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.7E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 Gene3D G3DSA:3.30.70.20 2 17 0.08 T 29-03-2018 AM474_RS07465 44cb5f54294b451693acde72a0a29904 107 SUPERFAMILY SSF54862 3 104 1.2E-24 T 29-03-2018 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 SUPERFAMILY SSF55604 494 567 1.31E-8 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 Pfam PF02378 Phosphotransferase system, EIIC 14 303 2.8E-72 T 29-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 7 457 3.7E-176 T 29-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 Gene3D G3DSA:3.30.1360.60 491 568 5.0E-13 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 Gene3D G3DSA:3.30.1360.60 383 460 9.3E-22 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 Pfam PF00367 phosphotransferase system, EIIB 496 527 1.2E-4 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 Pfam PF00367 phosphotransferase system, EIIB 390 418 9.0E-9 T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 360 444 1.2E-14 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 SUPERFAMILY SSF55604 385 459 3.4E-16 T 29-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AM474_RS08175 3e24b74c65778c231faf6fddc9e74e34 570 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 398 415 - T 29-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Gene3D G3DSA:3.40.50.970 338 530 6.4E-40 T 29-03-2018 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 SUPERFAMILY SSF52518 8 174 1.02E-38 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Gene3D G3DSA:3.40.50.970 4 184 1.3E-36 T 29-03-2018 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 525 2.8E-29 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Gene3D G3DSA:3.40.50.1220 185 337 3.2E-23 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 172 3.5E-42 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 329 2.7E-17 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 SUPERFAMILY SSF52467 189 345 5.14E-62 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 SUPERFAMILY SSF52518 355 529 6.24E-48 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS18695 9d5b415de71e2a2e8e7a52ecad5ca26e 532 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 SUPERFAMILY SSF51735 106 277 1.2E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 SMART SM00829 9 313 1.3E-41 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 Gene3D G3DSA:3.90.180.10 245 317 3.9E-5 T 29-03-2018 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 Gene3D G3DSA:3.90.180.10 2 146 1.9E-42 T 29-03-2018 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 SUPERFAMILY SSF50129 11 136 8.33E-37 T 29-03-2018 IPR011032 GroES-like AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 Gene3D G3DSA:3.40.50.720 147 244 3.5E-16 T 29-03-2018 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 8 314 6.7E-118 T 29-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 Pfam PF00107 Zinc-binding dehydrogenase 146 260 2.0E-18 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS05560 faedd71e426a11c4199588692e8b5a1f 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 82 1.1E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 5.2E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 5.2E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 SMART SM00382 159 303 1.1E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 Pfam PF00158 Sigma-54 interaction domain 140 305 1.6E-71 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 SUPERFAMILY SSF46689 352 441 1.13E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 SUPERFAMILY SSF52540 139 380 5.18E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 Pfam PF02954 Bacterial regulatory protein, Fis family 403 435 2.0E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 Gene3D G3DSA:1.10.8.60 312 382 3.2E-22 T 29-03-2018 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 Gene3D G3DSA:3.40.50.300 133 310 1.2E-25 T 29-03-2018 AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS29035 4f73b3566413c34fac3a17510b9ffaa2 442 Gene3D G3DSA:1.10.10.60 395 441 1.1E-10 T 29-03-2018 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 Gene3D G3DSA:1.10.10.60 5 61 1.1E-17 T 29-03-2018 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 Gene3D G3DSA:1.10.357.10 62 181 1.3E-18 T 29-03-2018 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 SUPERFAMILY SSF46689 1 72 1.49E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.0E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.0E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 SUPERFAMILY SSF48498 80 180 3.61E-21 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS19060 09128be4b532e280d8754f975a8c115c 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 1.1E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Gene3D G3DSA:3.10.20.30 266 365 1.3E-13 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Gene3D G3DSA:2.40.30.10 41 131 6.5E-17 T 29-03-2018 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 318 326 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Pfam PF00175 Oxidoreductase NAD-binding domain 151 254 1.8E-9 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Gene3D G3DSA:3.40.50.80 132 265 5.9E-18 T 29-03-2018 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 291 339 1.5E-4 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 SUPERFAMILY SSF54292 265 365 2.62E-18 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 SUPERFAMILY SSF63380 40 142 4.48E-19 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 SUPERFAMILY SSF52343 146 270 1.05E-23 T 29-03-2018 AM474_RS18755 048b4400a339b4d72542b2366ba5d34a 366 Pfam PF00970 Oxidoreductase FAD-binding domain 75 141 1.1E-5 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 167.863 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 SUPERFAMILY SSF56276 113 174 4.71E-25 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 SUPERFAMILY SSF56276 44 85 4.71E-25 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 Pfam PF02675 S-adenosylmethionine decarboxylase 36 170 1.1E-31 T 29-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 4 262 3.1E-147 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 PIRSF PIRSF001356 1 264 5.0E-150 T 29-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS11375 c64bfd1000b0edda0d985dd26b570f5b 264 Gene3D G3DSA:3.60.90.10 33 190 4.8E-47 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Gene3D G3DSA:3.30.300.30 469 572 6.0E-25 T 29-03-2018 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 SUPERFAMILY SSF56801 22 570 2.22E-131 T 29-03-2018 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Gene3D G3DSA:2.30.38.10 382 468 1.7E-22 T 29-03-2018 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Pfam PF00501 AMP-binding enzyme 34 476 5.7E-87 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Gene3D G3DSA:3.40.50.980 27 226 8.3E-26 T 29-03-2018 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Gene3D G3DSA:3.40.50.980 227 381 1.4E-44 T 29-03-2018 AM474_RS09020 1ee781a3e711aa2b4d99ac2bdfc65cba 632 Pfam PF13193 AMP-binding enzyme C-terminal domain 486 561 8.1E-16 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 318 458 3.81E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 198 290 3.81E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF51905 101 150 3.81E-54 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.390.30 437 562 1.1E-35 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 TIGRFAM TIGR02053 MerA: mercury(II) reductase 101 562 9.7E-188 T 29-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55424 437 560 3.44E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 306 434 1.0E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 101 419 1.5E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PIRSF PIRSF000350 2 562 2.9E-265 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Pfam PF00403 Heavy-metal-associated domain 6 65 1.8E-10 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.30.70.100 1 71 1.4E-18 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 111 129 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 238 255 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 470 490 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 16 26 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 535 554 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 273 290 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 293 308 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 PRINTS PR00945 Mercuric reductase class II signature 146 165 1.5E-88 T 29-03-2018 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 438 546 1.5E-28 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 SUPERFAMILY SSF55008 5 73 6.28E-17 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 257 305 7.0E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 Gene3D G3DSA:3.50.50.60 97 256 3.6E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 134 144 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS02900 a7ae2ac5423de5100681200752c343a5 562 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 29-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AM474_RS29485 17726026caa2b95d353270cbd69cc971 302 Gene3D G3DSA:3.40.50.80 140 301 9.3E-41 T 29-03-2018 AM474_RS29485 17726026caa2b95d353270cbd69cc971 302 Gene3D G3DSA:2.40.30.10 1 129 2.1E-33 T 29-03-2018 AM474_RS29485 17726026caa2b95d353270cbd69cc971 302 Pfam PF08021 Siderophore-interacting FAD-binding domain 13 129 1.0E-39 T 29-03-2018 IPR013113 FAD-binding 9, siderophore-interacting AM474_RS29485 17726026caa2b95d353270cbd69cc971 302 SUPERFAMILY SSF63380 6 128 5.67E-11 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS29485 17726026caa2b95d353270cbd69cc971 302 Pfam PF04954 Siderophore-interacting protein 146 298 5.3E-38 T 29-03-2018 IPR007037 Siderophore-interacting protein AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 Pfam PF07687 Peptidase dimerisation domain 187 280 2.5E-8 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 Gene3D G3DSA:3.40.630.10 1 256 7.8E-54 T 29-03-2018 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 Gene3D G3DSA:3.40.630.10 257 389 6.0E-24 T 29-03-2018 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 Pfam PF01546 Peptidase family M20/M25/M40 75 385 8.9E-35 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 376 3.0E-108 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 PIRSF PIRSF005962 3 389 5.0E-126 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 SUPERFAMILY SSF53187 6 199 4.4E-90 T 29-03-2018 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 SUPERFAMILY SSF53187 300 388 4.4E-90 T 29-03-2018 AM474_RS03795 e324b52819dded35563a94d59ce59c81 389 SUPERFAMILY SSF55031 186 293 3.53E-29 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 PIRSF PIRSF000423 1 432 1.2E-192 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 4 432 5.8E-213 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF53633 3 283 6.84E-63 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 432 222.198 T 29-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 SUPERFAMILY SSF55729 253 409 1.2E-18 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00583 Acetyltransferase (GNAT) family 321 398 2.9E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.630.30 287 431 3.6E-21 T 29-03-2018 AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 Pfam PF00696 Amino acid kinase family 25 259 1.0E-18 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16810 a9324c57adf80ac2d843be9dbee9a77f 432 Gene3D G3DSA:3.40.1160.10 2 285 7.7E-57 T 29-03-2018 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Gene3D G3DSA:3.30.450.20 551 678 1.1E-22 T 29-03-2018 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SUPERFAMILY SSF55785 539 668 1.92E-19 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00052 858 1105 1.3E-77 T 29-03-2018 IPR001633 EAL domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SUPERFAMILY SSF141868 865 1112 1.44E-74 T 29-03-2018 IPR001633 EAL domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00091 300 366 7.2E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00091 555 624 1.1E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00091 427 495 5.2 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Gene3D G3DSA:3.30.450.20 422 550 1.9E-22 T 29-03-2018 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Gene3D G3DSA:3.30.450.20 276 421 1.5E-27 T 29-03-2018 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF05231 MASE1 16 289 1.4E-17 T 29-03-2018 IPR007895 MASE1 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00267 674 846 1.3E-58 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 421 4.3E-26 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 552 681 8.2E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00086 501 543 2.3E-8 T 29-03-2018 IPR001610 PAC motif AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00086 632 674 120.0 T 29-03-2018 IPR001610 PAC motif AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SMART SM00086 373 415 1.3E-7 T 29-03-2018 IPR001610 PAC motif AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SUPERFAMILY SSF55785 435 544 1.31E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 683 845 6.0E-42 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SUPERFAMILY SSF55785 307 418 6.6E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF00990 Diguanylate cyclase, GGDEF domain 685 842 8.5E-43 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF08447 PAS fold 450 537 4.5E-17 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF08447 PAS fold 324 406 8.9E-11 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF00563 EAL domain 866 1100 6.4E-64 T 29-03-2018 IPR001633 EAL domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Gene3D G3DSA:3.30.70.270 679 854 2.4E-56 T 29-03-2018 AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Gene3D G3DSA:3.20.20.450 860 1119 2.1E-77 T 29-03-2018 IPR001633 EAL domain AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 SUPERFAMILY SSF55073 690 846 3.14E-47 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS24845 509a27bd13e75d61ddf418da604dc7a5 1120 Pfam PF08448 PAS fold 563 675 1.1E-11 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS30250 f9bf62877698b7ce32f7b9c65aaff594 458 Pfam PF14518 Iron-containing redox enzyme 100 264 2.0E-32 T 29-03-2018 IPR028201 PqqC-like protein AM474_RS30250 f9bf62877698b7ce32f7b9c65aaff594 458 Gene3D G3DSA:1.20.910.10 94 270 2.4E-24 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS30250 f9bf62877698b7ce32f7b9c65aaff594 458 SMART SM01236 131 228 1.4E-27 T 29-03-2018 AM474_RS30250 f9bf62877698b7ce32f7b9c65aaff594 458 Gene3D G3DSA:1.10.10.10 324 432 9.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 SMART SM00382 41 184 8.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 Pfam PF00158 Sigma-54 interaction domain 22 188 4.9E-68 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 SUPERFAMILY SSF46689 234 344 2.2E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:1.10.8.60 194 252 1.5E-21 T 29-03-2018 AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 SUPERFAMILY SSF52540 22 262 5.81E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:3.40.50.300 16 192 1.6E-27 T 29-03-2018 AM474_RS31385 95ff13e99b56a382c53ed858dd5a35a3 361 Gene3D G3DSA:1.10.10.60 253 345 8.6E-7 T 29-03-2018 AM474_RS16380 68b45b96820f77202bbf69e4653f95fb 141 Gene3D G3DSA:2.60.120.460 1 139 2.9E-54 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM474_RS16380 68b45b96820f77202bbf69e4653f95fb 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 9 139 1.5E-38 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM474_RS16380 68b45b96820f77202bbf69e4653f95fb 141 PIRSF PIRSF004681 1 139 8.5E-43 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM474_RS16380 68b45b96820f77202bbf69e4653f95fb 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 7.0E-35 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM474_RS16380 68b45b96820f77202bbf69e4653f95fb 141 SUPERFAMILY SSF111038 1 139 8.5E-45 T 29-03-2018 IPR001602 Uncharacterised protein family UPF0047 AM474_RS25340 3ae4b53df71179301cbe83b5b6918dc8 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 5.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25340 3ae4b53df71179301cbe83b5b6918dc8 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 1.0E-14 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS25340 3ae4b53df71179301cbe83b5b6918dc8 214 Gene3D G3DSA:1.10.3720.10 9 214 3.3E-35 T 29-03-2018 AM474_RS25340 3ae4b53df71179301cbe83b5b6918dc8 214 SUPERFAMILY SSF161098 14 198 4.45E-38 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 259 5.0E-8 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 SMART SM01009 9 126 8.4E-49 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Pfam PF06029 AlkA N-terminal domain 9 126 9.0E-32 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 SUPERFAMILY SSF48150 117 293 1.47E-45 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:1.10.150.20 230 259 0.17 T 29-03-2018 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:3.30.310.20 9 126 1.4E-30 T 29-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:1.10.1670.10 260 296 1.2E-12 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 SUPERFAMILY SSF55945 9 107 1.88E-27 T 29-03-2018 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 SMART SM00478 136 294 3.6E-15 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS27650 b86d19132f860ac4158314496ce9000c 297 Gene3D G3DSA:1.10.340.30 127 229 6.3E-26 T 29-03-2018 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 SUPERFAMILY SSF52172 9 161 2.56E-26 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 SMART SM00421 204 261 2.4E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 SUPERFAMILY SSF46894 199 260 7.82E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 237 1.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 221 1.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 249 1.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 Gene3D G3DSA:1.10.10.10 196 269 1.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 SMART SM00448 9 124 1.4E-17 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 Pfam PF00072 Response regulator receiver domain 11 122 4.5E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 Pfam PF00196 Bacterial regulatory proteins, luxR family 207 259 3.4E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS21935 6b736a9839651ee6f07521e4e51b3e81 275 Gene3D G3DSA:3.40.50.2300 1 146 2.1E-23 T 29-03-2018 AM474_RS16775 1f6a5f763fd3c1c0a2e24f5b586a8058 150 Gene3D G3DSA:2.40.50.140 92 148 1.6E-8 T 29-03-2018 AM474_RS16775 1f6a5f763fd3c1c0a2e24f5b586a8058 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 2.0E-28 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00970 Oxidoreductase FAD-binding domain 159 253 2.6E-12 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF63380 151 253 1.02E-30 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 353 361 6.8E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.8E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 186 198 6.8E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 248 257 6.8E-9 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Hamap MF_01252 Flavohemoprotein [hmp]. 1 391 53.564 T 29-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00042 Globin 6 103 9.0E-9 T 29-03-2018 IPR000971 Globin GO:0020037 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF46458 1 142 5.65E-38 T 29-03-2018 IPR009050 Globin-like AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 SUPERFAMILY SSF52343 255 388 6.02E-33 T 29-03-2018 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:1.10.490.10 1 162 3.5E-41 T 29-03-2018 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Pfam PF00175 Oxidoreductase NAD-binding domain 264 367 1.0E-9 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:3.40.50.80 254 392 1.9E-23 T 29-03-2018 AM474_RS01170 6630992faf4a5b4681184eb688ee3848 393 Gene3D G3DSA:2.40.30.10 163 253 6.2E-28 T 29-03-2018 AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00072 Response regulator receiver domain 3 113 6.9E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00862 146 220 2.0E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 SUPERFAMILY SSF52172 1 173 2.7E-43 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.7E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:3.40.50.2300 1 122 5.2E-40 T 29-03-2018 AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 Gene3D G3DSA:1.10.10.10 123 226 2.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21495 6c1b151816c261e4f6e1b16748439f60 227 SMART SM00448 1 113 4.5E-46 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 Gene3D G3DSA:3.50.50.60 1 138 4.1E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 Gene3D G3DSA:3.50.50.60 139 335 1.9E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 SUPERFAMILY SSF51905 4 339 1.53E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 4.1E-13 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.1E-13 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 4.1E-13 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 4.1E-13 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 4.7E-10 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 4.7E-10 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 188 4.7E-10 T 29-03-2018 AM474_RS03160 a635ef4101d6e8c3362a25c1d8512c7a 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 327 1.8E-53 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 4.3E-40 T 29-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 234 395 3.26E-67 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 29-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 6 110 2.2E-44 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 261 396 2.5E-48 T 29-03-2018 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 392 9.0E-182 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 143 260 1.2E-39 T 29-03-2018 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Gene3D G3DSA:3.30.300.10 12 139 8.1E-42 T 29-03-2018 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 4.0E-42 T 29-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 367 1.5E-66 T 29-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 SUPERFAMILY SSF55973 112 233 8.24E-50 T 29-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 55.903 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS11950 f9ad60a0e793620ac0e996a9eab5860a 396 PIRSF PIRSF000497 1 394 1.6E-167 T 29-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM474_RS10165 1f8378885f114d99044826df3186a811 156 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 50 132 4.9E-5 T 29-03-2018 AM474_RS05740 c8f83921301e62446c14fcb1ce387b4a 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 8.7E-22 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS05740 c8f83921301e62446c14fcb1ce387b4a 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 227 1.5E-17 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS05740 c8f83921301e62446c14fcb1ce387b4a 373 Gene3D G3DSA:3.40.47.10 220 373 3.6E-22 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS05740 c8f83921301e62446c14fcb1ce387b4a 373 Gene3D G3DSA:3.40.47.10 2 219 6.7E-36 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS05740 c8f83921301e62446c14fcb1ce387b4a 373 SUPERFAMILY SSF53901 4 372 2.25E-52 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS22150 fb2d14db2f2ec523a567c5421f437c9f 544 Pfam PF08479 POTRA domain, ShlB-type 48 121 5.8E-18 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM474_RS22150 fb2d14db2f2ec523a567c5421f437c9f 544 Gene3D G3DSA:3.10.20.310 53 120 5.1E-13 T 29-03-2018 AM474_RS22150 fb2d14db2f2ec523a567c5421f437c9f 544 Gene3D G3DSA:3.10.20.310 121 161 0.11 T 29-03-2018 AM474_RS22150 fb2d14db2f2ec523a567c5421f437c9f 544 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 184 506 7.2E-21 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM474_RS22150 fb2d14db2f2ec523a567c5421f437c9f 544 Gene3D G3DSA:2.40.160.50 162 544 2.3E-47 T 29-03-2018 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 115 4.4E-25 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 PIRSF PIRSF016578 2 194 3.3E-7 T 29-03-2018 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 PIRSF PIRSF016578 236 383 1.5E-6 T 29-03-2018 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Gene3D G3DSA:2.40.110.10 120 222 3.4E-28 T 29-03-2018 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 364 8.3E-34 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 SUPERFAMILY SSF47203 229 384 1.43E-43 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Gene3D G3DSA:1.20.140.10 223 386 1.9E-47 T 29-03-2018 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 SUPERFAMILY SSF56645 5 243 1.3E-60 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 218 2.5E-21 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS23075 b2414d8b54fe1641978389f3a7491762 386 Gene3D G3DSA:1.10.540.10 3 116 7.0E-28 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18415 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 63 3.1E-17 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AM474_RS18415 9d9d0ec2ecd9b318caaa03b1e325f89a 347 SUPERFAMILY SSF103088 171 277 1.16E-22 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS18415 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Gene3D G3DSA:3.30.1330.60 98 306 1.1E-37 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS18415 9d9d0ec2ecd9b318caaa03b1e325f89a 347 Pfam PF00691 OmpA family 174 264 4.0E-14 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 Pfam PF01546 Peptidase family M20/M25/M40 73 375 6.0E-32 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 SUPERFAMILY SSF53187 297 378 4.0E-52 T 29-03-2018 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 SUPERFAMILY SSF53187 6 176 4.0E-52 T 29-03-2018 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 Gene3D G3DSA:3.40.630.10 4 164 1.4E-25 T 29-03-2018 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 Gene3D G3DSA:3.30.70.360 176 293 4.7E-26 T 29-03-2018 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 Pfam PF07687 Peptidase dimerisation domain 175 285 1.8E-26 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 1.1E-111 T 29-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 AM474_RS16800 0a013e4b53f252de0b97827f5ed44f4e 384 SUPERFAMILY SSF55031 177 291 3.74E-22 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS10620 9b117d937f6e91847e2a4b83cfede8a5 346 PIRSF PIRSF018567 1 346 1.9E-166 T 29-03-2018 IPR011391 Acetoin catabolism kinase AcoX AM474_RS10620 9b117d937f6e91847e2a4b83cfede8a5 346 SUPERFAMILY SSF111331 92 146 6.8E-7 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM474_RS10620 9b117d937f6e91847e2a4b83cfede8a5 346 Gene3D G3DSA:3.40.50.10330 2 156 1.9E-15 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM474_RS10620 9b117d937f6e91847e2a4b83cfede8a5 346 Pfam PF01513 ATP-NAD kinase 8 232 1.3E-15 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 SUPERFAMILY SSF46689 191 238 2.69E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 SUPERFAMILY SSF46689 240 289 6.72E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 SMART SM00342 204 287 6.5E-31 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 Pfam PF12833 Helix-turn-helix domain 210 288 4.1E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 1.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 1.8E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 Gene3D G3DSA:1.10.10.60 102 241 1.0E-12 T 29-03-2018 AM474_RS09220 c616dda16508bb2a979b3f4d7bc84304 293 Gene3D G3DSA:1.10.10.60 242 293 2.9E-18 T 29-03-2018 AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 SUPERFAMILY SSF53098 7 453 1.33E-124 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 Pfam PF08411 Exonuclease C-terminal 207 470 5.2E-97 T 29-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 Gene3D G3DSA:3.30.420.10 2 196 3.2E-29 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 PIRSF PIRSF000977 1 477 2.9E-203 T 29-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 Pfam PF00929 Exonuclease 9 188 7.1E-25 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS21825 8db06376ddb992b96a8238680f49271a 480 SMART SM00479 6 198 3.9E-4 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 Gene3D G3DSA:1.10.287.110 180 250 4.2E-12 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 SMART SM00271 185 250 1.3E-9 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 Pfam PF00226 DnaJ domain 190 245 2.9E-8 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 SUPERFAMILY SSF158682 21 176 2.22E-11 T 29-03-2018 AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 PRINTS PR00625 DnaJ domain signature 230 250 2.7E-6 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 PRINTS PR00625 DnaJ domain signature 206 221 2.7E-6 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 PRINTS PR00625 DnaJ domain signature 188 206 2.7E-6 T 29-03-2018 IPR001623 DnaJ domain AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 Gene3D G3DSA:1.10.3680.10 45 179 3.8E-13 T 29-03-2018 IPR029024 TerB-like AM474_RS11635 d7795c83cec8e932860f05c78b7d53c8 252 SUPERFAMILY SSF46565 130 244 1.83E-18 T 29-03-2018 IPR001623 DnaJ domain AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 Pfam PF03466 LysR substrate binding domain 92 298 4.5E-41 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:1.10.10.10 7 92 1.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 SUPERFAMILY SSF53850 94 298 1.23E-42 T 29-03-2018 AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:3.40.190.10 96 180 1.6E-17 T 29-03-2018 AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 Gene3D G3DSA:3.40.190.10 181 266 1.6E-22 T 29-03-2018 AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 SUPERFAMILY SSF46785 10 116 2.83E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04855 460a2bf7afd87ad8c40c7aec958f33f9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 67 1.2E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 SUPERFAMILY SSF161098 368 438 3.14E-6 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 Gene3D G3DSA:1.10.3720.10 318 444 6.1E-13 T 29-03-2018 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 SUPERFAMILY SSF50978 22 309 2.93E-9 T 29-03-2018 IPR017986 WD40-repeat-containing domain GO:0005515 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 SUPERFAMILY SSF161098 446 662 2.88E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 Gene3D G3DSA:1.10.3720.10 445 673 1.3E-28 T 29-03-2018 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 Gene3D G3DSA:2.130.10.10 3 317 1.7E-11 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS15965 6014422561179b6d5b314f83e32d3cb6 677 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 394 672 1.1E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 Pfam PF00119 ATP synthase A chain 51 282 1.1E-55 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 217 226 - T 29-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 Gene3D G3DSA:1.20.120.220 98 289 5.7E-43 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 SUPERFAMILY SSF81336 99 282 2.75E-39 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.584 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14940 bb2a3cc259d814df5fb4621c17e714ee 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 283 4.3E-41 T 29-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS02600 bb5f2d0bb445c4b850b470ede09b6401 160 Gene3D G3DSA:3.30.750.24 2 108 7.2E-12 T 29-03-2018 IPR002645 STAS domain AM474_RS02600 bb5f2d0bb445c4b850b470ede09b6401 160 SUPERFAMILY SSF52091 6 106 2.75E-14 T 29-03-2018 IPR002645 STAS domain AM474_RS02600 bb5f2d0bb445c4b850b470ede09b6401 160 Pfam PF01740 STAS domain 7 103 4.2E-6 T 29-03-2018 IPR002645 STAS domain AM474_RS02600 bb5f2d0bb445c4b850b470ede09b6401 160 PIRSF PIRSF029548 1 160 2.0E-106 T 29-03-2018 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 Gene3D G3DSA:1.20.1050.10 80 231 1.0E-16 T 29-03-2018 AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF47616 158 229 6.55E-10 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 SUPERFAMILY SSF52833 1 102 4.9E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 Gene3D G3DSA:3.40.30.10 1 76 1.6E-7 T 29-03-2018 AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 1.9E-26 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS08995 eb781d86bd87af03d406fab5a3b3a697 233 Pfam PF17171 Glutathione S-transferase, C-terminal domain 164 226 1.9E-16 T 29-03-2018 IPR033468 Metaxin, glutathione S-transferase domain AM474_RS19765 2bb4edd22b0b3eb6546423167e59d636 259 Gene3D G3DSA:1.25.40.10 67 259 1.8E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19765 2bb4edd22b0b3eb6546423167e59d636 259 SUPERFAMILY SSF48452 159 255 1.28E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08360 ea99ae56b5dec0b02c342f6204d47de5 412 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 302 2.8E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS08360 ea99ae56b5dec0b02c342f6204d47de5 412 Gene3D G3DSA:1.20.1600.10 94 325 1.4E-27 T 29-03-2018 AM474_RS08360 ea99ae56b5dec0b02c342f6204d47de5 412 Gene3D G3DSA:2.40.50.100 13 93 6.4E-6 T 29-03-2018 AM474_RS08360 ea99ae56b5dec0b02c342f6204d47de5 412 SUPERFAMILY SSF111369 60 309 7.19E-66 T 29-03-2018 AM474_RS08360 ea99ae56b5dec0b02c342f6204d47de5 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 380 7.7E-81 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 SUPERFAMILY SSF53383 1 398 8.99E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 Gene3D G3DSA:3.90.1150.10 303 398 2.8E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 Gene3D G3DSA:3.40.640.10 71 302 1.1E-27 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 7.1E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.1E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 7.1E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.1E-38 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 Pfam PF00155 Aminotransferase class I and II 30 394 8.2E-77 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS04950 0ea7970badb56ee7a9c3ac4ed6bb258c 398 Gene3D G3DSA:3.90.1150.10 2 70 3.4E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS24120 677ed31237c837cfb3798c516dd6b664 381 Gene3D G3DSA:3.90.1510.10 42 275 4.9E-95 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM474_RS24120 677ed31237c837cfb3798c516dd6b664 381 PIRSF PIRSF006078 1 377 8.4E-135 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS24120 677ed31237c837cfb3798c516dd6b664 381 SUPERFAMILY SSF110738 1 374 5.62E-136 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS24120 677ed31237c837cfb3798c516dd6b664 381 Pfam PF02595 Glycerate kinase family 3 372 1.5E-149 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS24120 677ed31237c837cfb3798c516dd6b664 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 8.2E-163 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS04885 5116dea1729aedca1c877166ec120c83 145 Gene3D G3DSA:3.10.129.10 2 143 1.6E-30 T 29-03-2018 AM474_RS04885 5116dea1729aedca1c877166ec120c83 145 SUPERFAMILY SSF54637 3 139 2.8E-39 T 29-03-2018 IPR029069 HotDog domain AM474_RS04885 5116dea1729aedca1c877166ec120c83 145 Pfam PF13279 Thioesterase-like superfamily 15 134 3.1E-12 T 29-03-2018 AM474_RS19970 ad32348b69bfa08a6b413f0177c9fbb2 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 200 27.01 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM474_RS19970 ad32348b69bfa08a6b413f0177c9fbb2 205 SUPERFAMILY SSF89392 17 200 1.1E-50 T 29-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM474_RS19970 ad32348b69bfa08a6b413f0177c9fbb2 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 2 200 2.3E-90 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM474_RS19970 ad32348b69bfa08a6b413f0177c9fbb2 205 Pfam PF03550 Outer membrane lipoprotein LolB 48 198 4.8E-49 T 29-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 AM474_RS19970 ad32348b69bfa08a6b413f0177c9fbb2 205 Gene3D G3DSA:2.50.20.10 28 201 5.4E-54 T 29-03-2018 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 Gene3D G3DSA:3.40.50.2000 31 285 5.4E-5 T 29-03-2018 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 Pfam PF00534 Glycosyl transferases group 1 320 463 6.2E-15 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 34 500 2.3E-159 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 SUPERFAMILY SSF53756 34 503 4.19E-105 T 29-03-2018 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 Pfam PF08323 Starch synthase catalytic domain 34 268 2.5E-65 T 29-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 Hamap MF_00484 Glycogen synthase [glgA]. 33 500 40.95 T 29-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 AM474_RS30165 32c880dc1e102eb3945eb8255bbf2df5 513 Gene3D G3DSA:3.40.50.2000 286 482 1.9E-35 T 29-03-2018 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF50331 161 248 2.55E-10 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 15 103 5.9E-31 T 29-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF50331 113 181 1.65E-16 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 PIRSF PIRSF005763 2 252 1.8E-83 T 29-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF03459 TOBE domain 115 177 3.0E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF03459 TOBE domain 186 247 1.5E-13 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 113 179 4.6E-16 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 79 2.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:1.10.10.10 2 104 3.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 SUPERFAMILY SSF46785 11 99 2.21E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:2.40.50.100 187 249 1.1E-11 T 29-03-2018 AM474_RS12250 1c6a4c2137933ca9e50a65802b4a088e 252 Gene3D G3DSA:2.40.50.100 112 180 5.4E-17 T 29-03-2018 AM474_RS21905 508b69262acba7358ea2f6ddb837381b 421 SUPERFAMILY SSF52540 68 373 4.95E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21905 508b69262acba7358ea2f6ddb837381b 421 Pfam PF00437 Type II/IV secretion system protein 92 368 4.2E-91 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS21905 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.40.50.300 185 387 1.1E-20 T 29-03-2018 AM474_RS21905 508b69262acba7358ea2f6ddb837381b 421 Gene3D G3DSA:3.30.450.90 86 184 9.3E-38 T 29-03-2018 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 Gene3D G3DSA:3.30.870.10 322 473 8.1E-23 T 29-03-2018 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 Gene3D G3DSA:3.30.870.10 33 246 2.8E-32 T 29-03-2018 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 SMART SM00155 172 199 1.0E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 SMART SM00155 417 444 1.7E-5 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 SUPERFAMILY SSF56024 43 252 1.41E-42 T 29-03-2018 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 Pfam PF13091 PLD-like domain 328 466 4.8E-20 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 Pfam PF13091 PLD-like domain 80 231 1.4E-20 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS16260 86649cd1ea5f5c6b9beaadc531fbfffe 529 SUPERFAMILY SSF56024 284 508 1.86E-32 T 29-03-2018 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 290 3.9E-19 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:1.10.287.470 117 179 1.1E-7 T 29-03-2018 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 330 345 1.1E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 1.1E-5 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 SUPERFAMILY SSF111369 50 127 1.83E-10 T 29-03-2018 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 SUPERFAMILY SSF111369 184 306 6.93E-13 T 29-03-2018 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:1.20.1600.10 180 342 2.3E-18 T 29-03-2018 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 Pfam PF00529 HlyD membrane-fusion protein of T1SS 99 342 8.6E-8 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS03360 fd0de8030b319722cc853b442d1cfd7b 354 Gene3D G3DSA:2.40.50.100 48 116 2.2E-18 T 29-03-2018 AM474_RS22440 90986d4614f56772e2d5f16fa8cd3363 84 Gene3D G3DSA:1.10.150.250 1 84 1.1E-26 T 29-03-2018 AM474_RS22440 90986d4614f56772e2d5f16fa8cd3363 84 SUPERFAMILY SSF109910 3 79 1.83E-24 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM474_RS22440 90986d4614f56772e2d5f16fa8cd3363 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 8.3E-25 T 29-03-2018 IPR005631 Flavinator of succinate dehydrogenase AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.018 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.0E-40 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.0E-40 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.0E-40 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 2.0E-15 T 29-03-2018 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-51 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 Gene3D G3DSA:1.10.1900.20 55 116 6.1E-28 T 29-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 SUPERFAMILY SSF74731 3 116 2.75E-49 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01625 03c6f76219412bef5dc08bce94981067 118 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-48 T 29-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS31980 15cf6426fb9d3f3db8e481ff44dc229b 328 Pfam PF04773 FecR protein 117 213 3.9E-18 T 29-03-2018 IPR006860 FecR protein AM474_RS31980 15cf6426fb9d3f3db8e481ff44dc229b 328 Pfam PF16220 Domain of unknown function (DUF4880) 14 56 9.7E-14 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS31980 15cf6426fb9d3f3db8e481ff44dc229b 328 PIRSF PIRSF018266 4 328 6.8E-93 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF00376 MerR family regulatory protein 9 46 3.0E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 SMART SM00422 8 77 3.1E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 SUPERFAMILY SSF46955 8 130 1.98E-28 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 Pfam PF09278 MerR, DNA binding 51 113 3.0E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 7.8E-50 T 29-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 4 63 3.0E-19 T 29-03-2018 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 Gene3D G3DSA:1.10.1660.10 64 134 1.3E-20 T 29-03-2018 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 1.2E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 1.2E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02885 d927175a4fe89f282a2d63d72abaa26a 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 1.2E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS07680 b910869a8ca3406bf885b7fa240ce4a2 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 111 1.1E-30 T 29-03-2018 IPR006504 Transcriptional regulator Spx/MgsR AM474_RS07680 b910869a8ca3406bf885b7fa240ce4a2 115 Pfam PF03960 ArsC family 6 112 9.4E-19 T 29-03-2018 IPR006660 Arsenate reductase-like AM474_RS07680 b910869a8ca3406bf885b7fa240ce4a2 115 Gene3D G3DSA:3.40.30.10 2 115 6.7E-37 T 29-03-2018 AM474_RS07680 b910869a8ca3406bf885b7fa240ce4a2 115 SUPERFAMILY SSF52833 3 114 3.42E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 Gene3D G3DSA:1.10.1660.10 4 63 8.4E-21 T 29-03-2018 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF00376 MerR family regulatory protein 9 46 9.5E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 SUPERFAMILY SSF46955 8 129 2.53E-29 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF09278 MerR, DNA binding 51 113 1.9E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 SMART SM00422 8 77 4.9E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 5.4E-55 T 29-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01760 079b42ed1f87aefba89b146ca8bc13ff 144 Gene3D G3DSA:1.10.1660.10 64 143 9.2E-21 T 29-03-2018 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 4.7E-25 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 Gene3D G3DSA:1.10.1660.10 4 63 8.4E-21 T 29-03-2018 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF00376 MerR family regulatory protein 9 46 9.5E-11 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 SUPERFAMILY SSF46955 8 129 2.53E-29 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 Pfam PF09278 MerR, DNA binding 51 113 1.9E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 SMART SM00422 8 77 4.9E-29 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 5.4E-55 T 29-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS26265 079b42ed1f87aefba89b146ca8bc13ff 144 Gene3D G3DSA:1.10.1660.10 64 143 9.2E-21 T 29-03-2018 AM474_RS22720 dc5995af8311dd0cf3ccb6f376c2e178 415 Gene3D G3DSA:3.90.1150.10 289 408 1.5E-12 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS22720 dc5995af8311dd0cf3ccb6f376c2e178 415 Gene3D G3DSA:3.40.640.10 40 288 1.2E-25 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS22720 dc5995af8311dd0cf3ccb6f376c2e178 415 SUPERFAMILY SSF53383 17 411 8.96E-57 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS22720 dc5995af8311dd0cf3ccb6f376c2e178 415 Pfam PF00266 Aminotransferase class-V 34 401 2.9E-30 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS06235 14f1848ff49faf65ce56fb2c5211ae70 256 SUPERFAMILY SSF56281 1 256 1.14E-38 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS06235 14f1848ff49faf65ce56fb2c5211ae70 256 Gene3D G3DSA:3.60.15.10 1 256 2.2E-47 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS06235 14f1848ff49faf65ce56fb2c5211ae70 256 Pfam PF12706 Beta-lactamase superfamily domain 64 225 8.2E-17 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS06235 14f1848ff49faf65ce56fb2c5211ae70 256 SMART SM00849 36 225 0.0094 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS06235 14f1848ff49faf65ce56fb2c5211ae70 256 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 1 253 7.4E-114 T 29-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS21260 e0faa9e547b3acea6f5fb48ca75ece89 197 Gene3D G3DSA:3.40.50.10490 3 197 5.1E-40 T 29-03-2018 AM474_RS21260 e0faa9e547b3acea6f5fb48ca75ece89 197 Pfam PF13580 SIS domain 14 146 1.0E-35 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS21260 e0faa9e547b3acea6f5fb48ca75ece89 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.873 T 29-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 AM474_RS21260 e0faa9e547b3acea6f5fb48ca75ece89 197 SUPERFAMILY SSF53697 2 193 3.03E-58 T 29-03-2018 AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF46785 12 79 8.52E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.10.10.10 9 78 1.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF07729 FCD domain 85 204 2.5E-28 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.6E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 SUPERFAMILY SSF48008 82 215 6.54E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00345 17 75 3.9E-14 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 SMART SM00895 85 206 1.2E-19 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS25410 84714106c48ce87005ee06d8adc50fb5 222 Gene3D G3DSA:1.20.120.530 79 222 1.8E-30 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 303 2.1E-111 T 29-03-2018 IPR017554 Malonate decarboxylase, McdH subunit AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 305 1.4E-20 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 Gene3D G3DSA:3.40.366.10 1 132 2.6E-27 T 29-03-2018 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 PIRSF PIRSF000446 1 301 6.0E-55 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 Gene3D G3DSA:3.30.70.250 133 182 4.6E-18 T 29-03-2018 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 Pfam PF00698 Acyl transferase domain 5 271 7.3E-28 T 29-03-2018 IPR014043 Acyl transferase AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 Gene3D G3DSA:3.40.366.10 183 296 3.7E-18 T 29-03-2018 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 SUPERFAMILY SSF52151 3 122 5.23E-50 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 SUPERFAMILY SSF52151 192 283 5.23E-50 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS13720 f99d9b7e694806ea0d6bbb7b22c06bba 310 SUPERFAMILY SSF55048 122 191 7.72E-11 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM474_RS30985 52e1e58e10007e15d79ae86fb6384f55 125 Pfam PF03992 Antibiotic biosynthesis monooxygenase 48 95 1.1E-5 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS30985 52e1e58e10007e15d79ae86fb6384f55 125 Gene3D G3DSA:3.30.70.100 16 120 1.4E-12 T 29-03-2018 AM474_RS30985 52e1e58e10007e15d79ae86fb6384f55 125 SUPERFAMILY SSF54909 15 121 1.41E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS27930 a71136095dead36f9e59dc4e57215bba 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 4.3E-12 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS27930 a71136095dead36f9e59dc4e57215bba 123 Gene3D G3DSA:3.40.30.10 25 123 2.0E-15 T 29-03-2018 AM474_RS27930 a71136095dead36f9e59dc4e57215bba 123 SUPERFAMILY SSF52833 43 121 5.46E-19 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 SUPERFAMILY SSF88946 8 108 4.71E-11 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 Pfam PF08281 Sigma-70, region 4 119 170 4.4E-13 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 168 4.2E-15 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 Gene3D G3DSA:1.10.1740.10 3 84 3.2E-12 T 29-03-2018 AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 Gene3D G3DSA:1.10.10.10 85 176 3.0E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 Pfam PF04542 Sigma-70 region 2 18 88 8.5E-6 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18720 cdf0262d09b3b5c71ad69d7ac2fac656 178 SUPERFAMILY SSF88659 114 175 3.05E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS07995 6e45a65e7123de2264a215c50aa37a24 230 Pfam PF13091 PLD-like domain 103 224 4.3E-28 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS07995 6e45a65e7123de2264a215c50aa37a24 230 Gene3D G3DSA:3.30.870.10 6 230 9.2E-26 T 29-03-2018 AM474_RS07995 6e45a65e7123de2264a215c50aa37a24 230 SUPERFAMILY SSF56024 91 226 4.71E-31 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:1.20.120.330 837 980 2.9E-38 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 SUPERFAMILY SSF81301 549 840 1.24E-82 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:1.10.4050.10 8 129 6.0E-13 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:1.10.4050.10 552 661 7.6E-20 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Pfam PF08335 GlnD PII-uridylyltransferase 317 456 2.8E-44 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Pfam PF08335 GlnD PII-uridylyltransferase 852 955 2.8E-12 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:3.30.460.10 662 836 3.2E-56 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:3.30.460.10 131 304 5.3E-61 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Gene3D G3DSA:1.20.120.330 305 460 2.0E-48 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 577 830 2.1E-93 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 48 296 1.5E-97 T 29-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 SUPERFAMILY SSF81593 307 456 1.18E-41 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 SUPERFAMILY SSF81593 840 979 1.02E-28 T 29-03-2018 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 45 982 19.825 T 29-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 AM474_RS18100 c0fbfd713729396df6b99aeb508ef381 982 SUPERFAMILY SSF81301 29 306 1.96E-87 T 29-03-2018 AM474_RS15740 75d4a52240c364b46c5646f01368dbd5 96 Pfam PF05164 Cell division protein ZapA 9 91 7.8E-13 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM474_RS15740 75d4a52240c364b46c5646f01368dbd5 96 SUPERFAMILY SSF102829 10 94 5.89E-16 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SUPERFAMILY SSF50249 642 729 1.72E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Gene3D G3DSA:2.40.50.140 635 730 4.8E-26 T 29-03-2018 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SUPERFAMILY SSF47781 564 636 1.78E-20 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Pfam PF09371 Tex-like protein N-terminal domain 20 197 1.4E-63 T 29-03-2018 IPR018974 Tex-like protein, N-terminal AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Gene3D G3DSA:1.10.10.650 4 107 2.6E-32 T 29-03-2018 IPR023319 Tex-like protein, HTH domain AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SUPERFAMILY SSF47781 474 560 4.45E-28 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Gene3D G3DSA:1.10.3500.10 108 361 5.2E-74 T 29-03-2018 IPR023323 Tex-like domain AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Pfam PF00575 S1 RNA binding domain 653 724 2.5E-20 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Gene3D G3DSA:1.10.3500.10 362 502 4.1E-41 T 29-03-2018 IPR023323 Tex-like domain AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SMART SM00732 329 428 4.2E-41 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SMART SM00316 653 724 1.6E-24 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Pfam PF12836 Helix-hairpin-helix motif 495 559 4.5E-29 T 29-03-2018 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Pfam PF16921 Tex protein YqgF-like domain 330 455 3.7E-53 T 29-03-2018 IPR032639 Tex protein, YqgF-like domain AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SUPERFAMILY SSF158832 4 324 1.83E-116 T 29-03-2018 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 Gene3D G3DSA:1.10.150.310 503 634 1.2E-42 T 29-03-2018 AM474_RS16825 404ad8ba4802892189b1851bf0523623 779 SUPERFAMILY SSF53098 325 473 4.32E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS23730 32c1b543346c8e0b924c256de23666e5 143 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 29 139 3.1E-44 T 29-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM474_RS23730 32c1b543346c8e0b924c256de23666e5 143 Gene3D G3DSA:3.40.30.10 20 143 7.4E-5 T 29-03-2018 AM474_RS23730 32c1b543346c8e0b924c256de23666e5 143 Pfam PF07511 Protein of unknown function (DUF1525) 30 141 1.7E-38 T 29-03-2018 IPR011090 Integrating conjugative element protein, PFL4709 AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 Gene3D G3DSA:3.30.1490.20 337 385 3.5E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 Gene3D G3DSA:3.30.470.20 386 499 1.5E-23 T 29-03-2018 AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 Gene3D G3DSA:3.40.50.20 209 330 3.7E-19 T 29-03-2018 AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 56 206 2.3E-44 T 29-03-2018 IPR025839 RimK-like ATPgrasp N-terminal domain AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 SUPERFAMILY SSF56059 306 514 6.09E-35 T 29-03-2018 AM474_RS25800 47b47b0c62fc5100ef486ad9497b8fe0 529 Pfam PF08443 RimK-like ATP-grasp domain 316 492 1.3E-5 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM474_RS18775 408c0e40996529229636809bf764c364 229 Gene3D G3DSA:3.40.50.2300 1 122 1.8E-32 T 29-03-2018 AM474_RS18775 408c0e40996529229636809bf764c364 229 SMART SM00448 1 111 1.3E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18775 408c0e40996529229636809bf764c364 229 Pfam PF00072 Response regulator receiver domain 3 111 5.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS18775 408c0e40996529229636809bf764c364 229 SMART SM00862 144 219 4.9E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS18775 408c0e40996529229636809bf764c364 229 Gene3D G3DSA:1.10.10.10 123 225 7.6E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18775 408c0e40996529229636809bf764c364 229 SUPERFAMILY SSF52172 1 178 1.16E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18775 408c0e40996529229636809bf764c364 229 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 1.0E-104 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM474_RS18775 408c0e40996529229636809bf764c364 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 9.7E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 Pfam PF03466 LysR substrate binding domain 90 294 1.1E-36 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 SUPERFAMILY SSF46785 4 85 6.81E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 Gene3D G3DSA:3.40.190.10 89 175 1.6E-12 T 29-03-2018 AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 SUPERFAMILY SSF53850 90 297 2.71E-41 T 29-03-2018 AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 Gene3D G3DSA:1.10.10.10 3 84 7.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 Gene3D G3DSA:3.40.190.10 176 265 3.3E-17 T 29-03-2018 AM474_RS05365 6bf000c6ba7fae7501ce6a3d0119f60f 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 PIRSF PIRSF001227 1 794 1.3E-168 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 SUPERFAMILY SSF56235 39 794 1.77E-212 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Gene3D G3DSA:1.10.1400.10 555 664 1.7E-29 T 29-03-2018 AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Gene3D G3DSA:3.60.20.10 339 554 4.9E-45 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Gene3D G3DSA:3.60.20.10 205 329 7.4E-24 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Gene3D G3DSA:3.60.20.10 665 784 7.7E-8 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Pfam PF01804 Penicillin amidase 42 782 3.7E-200 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AM474_RS13220 fcfd05174658823895c835ac2365bb1f 795 Gene3D G3DSA:1.10.439.10 30 196 7.8E-52 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 SUPERFAMILY SSF46626 24 156 2.52E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Gene3D G3DSA:1.10.760.10 306 420 7.0E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 SUPERFAMILY SSF46626 552 659 6.21E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 SUPERFAMILY SSF46626 434 539 4.57E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Gene3D G3DSA:1.10.760.10 158 302 1.7E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Gene3D G3DSA:1.10.760.10 21 147 1.8E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 311 392 1.2E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 561 648 1.7E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Gene3D G3DSA:1.10.760.10 442 536 8.9E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 SUPERFAMILY SSF46626 311 419 6.29E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 SUPERFAMILY SSF46626 180 290 2.52E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Pfam PF00034 Cytochrome c 34 132 2.0E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20490 2e42a1ebe47a97abddfea598487c2261 675 Gene3D G3DSA:1.10.760.10 537 652 3.3E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS25465 0f40f7fe0ea64558f31dc52a759a9c19 194 PIRSF PIRSF000709 6 189 0.0035 T 29-03-2018 AM474_RS25465 0f40f7fe0ea64558f31dc52a759a9c19 194 Gene3D G3DSA:3.40.50.1240 1 194 5.1E-42 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS25465 0f40f7fe0ea64558f31dc52a759a9c19 194 SUPERFAMILY SSF53254 2 188 3.64E-48 T 29-03-2018 IPR029033 Histidine phosphatase superfamily AM474_RS25465 0f40f7fe0ea64558f31dc52a759a9c19 194 SMART SM00855 4 153 5.6E-15 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS25465 0f40f7fe0ea64558f31dc52a759a9c19 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 184 4.7E-43 T 29-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AM474_RS17550 59a6c98f48bedf0cc98cc02f2c3cdf26 208 Pfam PF02036 SCP-2 sterol transfer family 17 114 8.2E-13 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS17550 59a6c98f48bedf0cc98cc02f2c3cdf26 208 SUPERFAMILY SSF55718 29 122 1.61E-5 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS15830 a0167caca604385be31587c131a93f4c 336 SMART SM00342 226 309 4.4E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 Gene3D G3DSA:1.10.10.60 268 318 4.0E-13 T 29-03-2018 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 Gene3D G3DSA:1.10.10.60 228 267 4.0E-5 T 29-03-2018 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 SUPERFAMILY SSF52317 5 190 1.67E-46 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS15830 a0167caca604385be31587c131a93f4c 336 Gene3D G3DSA:3.40.50.880 2 227 2.9E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS15830 a0167caca604385be31587c131a93f4c 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 SUPERFAMILY SSF46689 262 310 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 Pfam PF12833 Helix-turn-helix domain 232 309 1.2E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS15830 a0167caca604385be31587c131a93f4c 336 Pfam PF01965 DJ-1/PfpI family 22 171 8.7E-14 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 SUPERFAMILY SSF52402 133 269 9.21E-16 T 29-03-2018 AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 Gene3D G3DSA:3.40.50.620 1 128 1.8E-22 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 231 243 1.2E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 133 151 1.2E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 PRINTS PR01438 Universal stress protein signature 249 271 1.2E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 SUPERFAMILY SSF52402 1 124 1.09E-22 T 29-03-2018 AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 Gene3D G3DSA:3.40.50.620 129 271 2.6E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 Pfam PF00582 Universal stress protein family 133 270 1.1E-15 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS18020 6f258099e6aba92c699326a2620dae85 271 Pfam PF00582 Universal stress protein family 1 124 5.4E-21 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS18130 806938d5a64d72c7530c73628df9e804 244 Gene3D G3DSA:3.90.1200.10 46 242 1.6E-13 T 29-03-2018 AM474_RS18130 806938d5a64d72c7530c73628df9e804 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 42 211 1.4E-17 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM474_RS18130 806938d5a64d72c7530c73628df9e804 244 SUPERFAMILY SSF56112 35 181 1.64E-18 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS18130 806938d5a64d72c7530c73628df9e804 244 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 154 166 - T 29-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 SUPERFAMILY SSF47413 9 66 6.14E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 Pfam PF13560 Helix-turn-helix domain 10 68 2.7E-8 T 29-03-2018 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 SMART SM00530 13 68 3.7E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 Gene3D G3DSA:1.10.10.60 9 35 6.4E-8 T 29-03-2018 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 Gene3D G3DSA:3.30.450.20 73 183 2.0E-5 T 29-03-2018 AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 SUPERFAMILY SSF55785 69 128 3.62E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS28695 63932e23a20c3292513258e5d27d98ad 184 Gene3D G3DSA:3.30.1190.10 36 72 1.2E-5 T 29-03-2018 AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 Gene3D G3DSA:3.30.700.10 7 138 2.0E-25 T 29-03-2018 AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.0E-11 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 120 1.6E-17 T 29-03-2018 IPR031982 Type IV minor pilin ComP AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 SUPERFAMILY SSF54523 7 131 3.61E-25 T 29-03-2018 AM474_RS20565 68bb78763e09049362cd7e6d495c7086 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 2.7E-11 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20135 2bd77a9dc087ef1465d951c1eb571c0e 60 PIRSF PIRSF037225 1 60 6.2E-26 T 29-03-2018 IPR017143 Uncharacterised conserved protein UCP037225 AM474_RS20135 2bd77a9dc087ef1465d951c1eb571c0e 60 Pfam PF14255 Cysteine-rich CPXCG 7 56 7.5E-24 T 29-03-2018 IPR025990 Cysteine-rich CPXCG protein AM474_RS12905 017f748384755b133aef000d940ba85c 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS12905 017f748384755b133aef000d940ba85c 83 Gene3D G3DSA:3.30.70.20 51 79 0.027 T 29-03-2018 AM474_RS12905 017f748384755b133aef000d940ba85c 83 Gene3D G3DSA:3.30.70.20 3 50 2.2E-13 T 29-03-2018 AM474_RS12905 017f748384755b133aef000d940ba85c 83 SUPERFAMILY SSF54862 5 76 1.08E-19 T 29-03-2018 AM474_RS12905 017f748384755b133aef000d940ba85c 83 Pfam PF00037 4Fe-4S binding domain 5 25 3.3E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS15305 810dac3a7fe294d9c8fd1163761250c9 292 Gene3D G3DSA:3.60.10.10 22 272 2.0E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS15305 810dac3a7fe294d9c8fd1163761250c9 292 SUPERFAMILY SSF56219 28 277 1.23E-33 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS15305 810dac3a7fe294d9c8fd1163761250c9 292 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 38 264 1.6E-11 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS27975 31af409f5efc7a6ba4b03dcf6e89ceb8 358 Pfam PF00793 DAHP synthetase I family 42 339 1.8E-93 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS27975 31af409f5efc7a6ba4b03dcf6e89ceb8 358 Gene3D G3DSA:3.20.20.70 9 357 1.8E-124 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS27975 31af409f5efc7a6ba4b03dcf6e89ceb8 358 SUPERFAMILY SSF51569 8 349 2.56E-133 T 29-03-2018 AM474_RS27975 31af409f5efc7a6ba4b03dcf6e89ceb8 358 PIRSF PIRSF001361 1 355 4.1E-156 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS27975 31af409f5efc7a6ba4b03dcf6e89ceb8 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 7.7E-149 T 29-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 Pfam PF12128 Protein of unknown function (DUF3584) 62 1264 1.5E-129 T 29-03-2018 IPR021979 Protein of unknown function DUF3584 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 Gene3D G3DSA:1.20.5.50 834 953 0.1 T 29-03-2018 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 Gene3D G3DSA:1.20.5.320 528 621 5.1E-5 T 29-03-2018 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 Gene3D G3DSA:1.20.5.320 651 763 0.0022 T 29-03-2018 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 Gene3D G3DSA:3.40.50.300 67 188 1.3E-6 T 29-03-2018 AM474_RS01545 75afc3cf7bf86a17e5dd3a7719401310 1299 SUPERFAMILY SSF52540 74 143 1.98E-7 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31150 ea7d123872f38c0ee8a4da99beb2d866 282 SUPERFAMILY SSF52540 17 230 4.9E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31150 ea7d123872f38c0ee8a4da99beb2d866 282 Gene3D G3DSA:3.40.50.300 13 253 1.7E-59 T 29-03-2018 AM474_RS31150 ea7d123872f38c0ee8a4da99beb2d866 282 SMART SM00382 45 226 5.0E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31150 ea7d123872f38c0ee8a4da99beb2d866 282 Pfam PF00005 ABC transporter 37 178 1.0E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS31150 ea7d123872f38c0ee8a4da99beb2d866 282 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 Gene3D G3DSA:1.10.40.30 374 444 3.7E-20 T 29-03-2018 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 Pfam PF00206 Lyase 17 298 2.6E-41 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 SMART SM00998 366 445 2.4E-25 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 444 2.7E-99 T 29-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 367 442 1.4E-16 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 8.6E-24 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 8.6E-24 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 8.6E-24 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 8.6E-24 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 SUPERFAMILY SSF48557 11 445 1.4E-115 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 Gene3D G3DSA:1.10.275.10 4 104 1.2E-17 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.4E-10 T 29-03-2018 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.4E-10 T 29-03-2018 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.4E-10 T 29-03-2018 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.4E-10 T 29-03-2018 AM474_RS06910 cd312fac7edfdcfd0b8ddc282dec344e 477 Gene3D G3DSA:1.20.200.10 105 373 3.6E-74 T 29-03-2018 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 PIRSF PIRSF000137 3 541 1.9E-146 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 Pfam PF00732 GMC oxidoreductase 8 298 2.0E-76 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 Pfam PF05199 GMC oxidoreductase 390 526 3.5E-39 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 Gene3D G3DSA:3.30.560.10 108 489 9.4E-99 T 29-03-2018 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 SUPERFAMILY SSF54373 293 476 2.06E-58 T 29-03-2018 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 SUPERFAMILY SSF51905 7 291 5.83E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 SUPERFAMILY SSF51905 475 535 5.83E-86 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07910 6bcec850db20f1389bd08ab1e8cf7149 557 Gene3D G3DSA:4.10.450.10 40 107 2.4E-28 T 29-03-2018 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 SUPERFAMILY SSF46689 12 86 1.85E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 Gene3D G3DSA:1.10.10.60 1 45 6.0E-14 T 29-03-2018 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 Gene3D G3DSA:1.10.260.40 46 106 1.2E-9 T 29-03-2018 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 4.3E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 4.3E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25130 b76535f29af110ecbaaf5c195f5b7d7e 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 2.0E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS19035 c8236681fc25efd456fa499fea936832 263 Pfam PF03059 Nicotianamine synthase protein 118 246 7.8E-12 T 29-03-2018 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 AM474_RS19035 c8236681fc25efd456fa499fea936832 263 Gene3D G3DSA:3.40.50.150 16 257 4.2E-15 T 29-03-2018 AM474_RS19035 c8236681fc25efd456fa499fea936832 263 SUPERFAMILY SSF53335 111 220 9.3E-10 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 405 2.3E-12 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF52413 305 434 2.62E-25 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 SMART SM00984 317 425 2.2E-19 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 228 436 1.0E-43 T 29-03-2018 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:3.40.50.720 1 203 3.1E-45 T 29-03-2018 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Gene3D G3DSA:1.20.5.170 204 227 1.5E-12 T 29-03-2018 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 298 2.2E-28 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 190 1.1E-65 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF51735 1 195 2.91E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 410 3.2E-131 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 SUPERFAMILY SSF48179 204 300 7.48E-28 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF500135 1 436 2.2E-249 T 29-03-2018 IPR028358 GDP-mannose 6-dehydrogenase GO:0042121|GO:0047919 KEGG: 00040+1.1.1.13|KEGG: 00051+1.1.1.132|KEGG: 00520+1.1.1.132|MetaCyc: PWY-6073|MetaCyc: PWY-6082 AM474_RS07025 0d850c5342cefa0f63a3bc0fdbab94e5 436 PIRSF PIRSF000124 1 436 1.1E-145 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 SUPERFAMILY SSF89095 308 413 2.35E-35 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 13 491 38.612 T 29-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 Pfam PF02637 GatB domain 339 490 1.5E-52 T 29-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 Pfam PF02934 GatB/GatE catalytic domain 16 299 4.2E-111 T 29-03-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 SUPERFAMILY SSF55931 15 307 2.09E-119 T 29-03-2018 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 Gene3D G3DSA:1.10.10.410 426 491 1.4E-23 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AM474_RS20965 1e018e830de133aed70167512edc17a3 492 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 490 9.2E-171 T 29-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 155 169 - T 29-03-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AM474_RS20965 1e018e830de133aed70167512edc17a3 492 SMART SM00845 339 490 3.7E-79 T 29-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 SUPERFAMILY SSF74653 255 336 1.31E-24 T 29-03-2018 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 261 337 4.2E-21 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 PRINTS PR01374 Gram-negative bacterial tonB protein signature 170 180 1.9E-30 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 PRINTS PR01374 Gram-negative bacterial tonB protein signature 296 313 1.9E-30 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 PRINTS PR01374 Gram-negative bacterial tonB protein signature 256 277 1.9E-30 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 PRINTS PR01374 Gram-negative bacterial tonB protein signature 277 295 1.9E-30 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 262 338 1.5E-21 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS15085 94a2b6454dc41bf3a401d9b4e0d46977 342 Gene3D G3DSA:3.30.2420.10 265 342 2.0E-17 T 29-03-2018 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 SUPERFAMILY SSF111342 6 288 4.58E-83 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 321 3.4E-57 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 27.553 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 Pfam PF01888 CbiD 12 271 1.2E-89 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 PIRSF PIRSF026782 9 366 1.6E-122 T 29-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 AM474_RS03725 dfab8a11ef36bd44d3f18fd41aa40a97 366 Gene3D G3DSA:3.30.2110.10 14 186 2.3E-60 T 29-03-2018 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 4.6E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 Pfam PF00072 Response regulator receiver domain 4 115 2.3E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 SMART SM00421 145 202 6.3E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 Gene3D G3DSA:3.40.50.2300 1 133 4.2E-32 T 29-03-2018 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 SMART SM00448 2 114 7.6E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 SUPERFAMILY SSF46894 137 208 7.14E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 SUPERFAMILY SSF52172 1 128 9.25E-32 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09495 9a7779bfad177ec830658d72300b0349 209 Gene3D G3DSA:1.10.10.10 146 208 4.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.1E-12 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.2E-9 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 546 852 1.67E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 29-03-2018 IPR028299 ClpA/B, conserved site 2 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 1.8E-55 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.8.60 344 547 1.7E-44 T 29-03-2018 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 5.5E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 5.5E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 5.5E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 5.5E-42 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 29-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.1780.10 1 151 4.5E-32 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 4.9E-12 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 198 343 2.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SMART SM00382 597 765 4.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 552 763 1.2E-54 T 29-03-2018 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:3.40.50.300 157 342 1.3E-23 T 29-03-2018 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF81923 4 155 1.96E-38 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 842 2.9E-25 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 Gene3D G3DSA:1.10.8.60 764 854 1.4E-21 T 29-03-2018 AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SMART SM01086 764 853 1.4E-36 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS20640 9bd3b37841e722ae71996bd433ec927a 854 SUPERFAMILY SSF52540 159 545 2.51E-98 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14955 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.8E-24 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.8E-24 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 3.8E-24 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 3.8E-24 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.8E-24 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 SUPERFAMILY SSF47928 3 105 4.84E-25 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 3.9E-49 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.687 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 Gene3D G3DSA:1.10.520.20 2 107 1.3E-32 T 29-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14955 94409f5629df26021006a6f972a216d7 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 3.7E-56 T 29-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 SUPERFAMILY SSF46689 8 78 1.55E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 7.5E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 Gene3D G3DSA:1.10.10.60 5 70 9.3E-18 T 29-03-2018 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 Gene3D G3DSA:1.10.357.10 71 211 6.8E-17 T 29-03-2018 AM474_RS25920 33fccf60a7cb65226b0f7e1e79e25ca3 214 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 155 205 5.9E-8 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 Gene3D G3DSA:3.55.50.10 96 185 5.6E-20 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 SUPERFAMILY SSF69255 364 451 9.94E-34 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 SUPERFAMILY SSF69349 442 493 1.41E-9 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 4.9E-161 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 1.6E-120 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 615 759 5.1E-49 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 SUPERFAMILY SSF69279 197 365 9.52E-32 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 Gene3D G3DSA:2.40.50.230 370 452 1.2E-35 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 2.8E-75 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 SUPERFAMILY SSF69279 9 182 1.53E-47 T 29-03-2018 AM474_RS13455 ac7b868b27586da10d2ae9a631a87673 832 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 7.0E-34 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM474_RS08255 b29f519ef4b860e2cee1ddfa09aa37fb 245 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 4 243 2.9E-69 T 29-03-2018 IPR014147 Type IV conjugative transfer protein TrbJ AM474_RS08255 b29f519ef4b860e2cee1ddfa09aa37fb 245 Gene3D G3DSA:1.20.58.430 27 220 2.8E-34 T 29-03-2018 AM474_RS08255 b29f519ef4b860e2cee1ddfa09aa37fb 245 SUPERFAMILY SSF101082 27 208 2.62E-5 T 29-03-2018 IPR023220 Type IV secretion system, VirB5-domain AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 246 367 7.25E-38 T 29-03-2018 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 249 367 2.7E-26 T 29-03-2018 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 7.3E-111 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 125 248 5.3E-34 T 29-03-2018 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 8.3E-42 T 29-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 PIRSF PIRSF000804 1 367 3.5E-125 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 126 245 3.14E-31 T 29-03-2018 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Gene3D G3DSA:3.10.150.10 1 123 2.3E-29 T 29-03-2018 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 1.6E-39 T 29-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 SMART SM00480 17 363 1.3E-163 T 29-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 4.2E-41 T 29-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS14870 11d65719c9b894c83788e1ecf656bf53 367 SUPERFAMILY SSF55979 1 120 3.14E-29 T 29-03-2018 AM474_RS17105 e0f694653a7411d168102920ddecc3a6 360 Gene3D G3DSA:3.30.360.10 143 358 2.8E-38 T 29-03-2018 AM474_RS17105 e0f694653a7411d168102920ddecc3a6 360 Gene3D G3DSA:3.40.50.720 6 142 6.2E-36 T 29-03-2018 AM474_RS17105 e0f694653a7411d168102920ddecc3a6 360 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 124 3.8E-21 T 29-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 AM474_RS17105 e0f694653a7411d168102920ddecc3a6 360 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 219 6.5E-9 T 29-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AM474_RS17105 e0f694653a7411d168102920ddecc3a6 360 SUPERFAMILY SSF51735 10 203 4.38E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 6.9E-68 T 29-03-2018 AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 SUPERFAMILY SSF51735 9 249 5.0E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 Gene3D G3DSA:3.40.50.720 10 254 8.1E-67 T 29-03-2018 AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04765 e8ed7b3e741131cb9c8f6449f83f1cb1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.0E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 Gene3D G3DSA:3.40.50.720 1 260 5.8E-57 T 29-03-2018 AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 SUPERFAMILY SSF51735 1 259 2.45E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-5 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.7E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25795 398c53372133926a45b953cb2d67ad10 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 2.3E-41 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 SUPERFAMILY SSF69255 371 459 6.28E-34 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 3.4E-204 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 SUPERFAMILY SSF69349 449 631 1.65E-40 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 SUPERFAMILY SSF69279 10 184 4.99E-58 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 511 4.7E-123 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 Gene3D G3DSA:3.55.50.10 95 188 1.7E-31 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 Gene3D G3DSA:2.40.50.230 377 459 1.1E-38 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 SUPERFAMILY SSF69279 191 371 8.33E-42 T 29-03-2018 AM474_RS05785 202d91cca0d75c0a974dcf731305ce2c 688 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 3.2E-79 T 29-03-2018 AM474_RS30965 61c3038443b726e186fc214de3060410 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.0E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30965 61c3038443b726e186fc214de3060410 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.0E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30965 61c3038443b726e186fc214de3060410 196 Gene3D G3DSA:1.10.260.40 39 67 6.0E-12 T 29-03-2018 AM474_RS30965 61c3038443b726e186fc214de3060410 196 Gene3D G3DSA:1.10.10.60 1 38 8.2E-16 T 29-03-2018 AM474_RS30965 61c3038443b726e186fc214de3060410 196 SUPERFAMILY SSF46689 3 86 5.99E-21 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30965 61c3038443b726e186fc214de3060410 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.2E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30965 61c3038443b726e186fc214de3060410 196 Gene3D G3DSA:1.10.357.10 68 193 2.2E-14 T 29-03-2018 AM474_RS30965 61c3038443b726e186fc214de3060410 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 Pfam PF00696 Amino acid kinase family 1 283 1.8E-25 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 2.6E-70 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 TIGRFAM TIGR00746 arcC: carbamate kinase 1 301 1.2E-138 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 Gene3D G3DSA:3.40.1160.10 1 302 1.2E-46 T 29-03-2018 AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 SUPERFAMILY SSF53633 1 300 4.06E-78 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16975 f5f88dfd269507669e109bb3599bd2bb 310 PIRSF PIRSF000723 1 302 1.1E-111 T 29-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 Gene3D G3DSA:2.60.130.10 2 309 1.6E-72 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 290 4.1E-141 T 29-03-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 Pfam PF00775 Dioxygenase 105 291 2.2E-67 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 SUPERFAMILY SSF49482 4 293 6.8E-96 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS32185 7bb2b8b485c659e081eefc4efdbff1d1 310 Pfam PF04444 Catechol dioxygenase N terminus 27 95 2.2E-24 T 29-03-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 Gene3D G3DSA:3.40.50.720 3 196 1.7E-53 T 29-03-2018 AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 Pfam PF00106 short chain dehydrogenase 15 207 1.6E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.5E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.5E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.5E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.5E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.5E-22 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 SUPERFAMILY SSF51735 12 243 3.61E-59 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05095 7ca5c0fcc6b7801b7e0d910d2513908b 246 Gene3D G3DSA:3.40.50.720 197 246 0.001 T 29-03-2018 AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:2.30.40.10 5 80 1.4E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Gene3D G3DSA:3.20.20.140 81 373 2.5E-77 T 29-03-2018 AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51556 71 374 4.0E-104 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 Pfam PF01979 Amidohydrolase family 69 430 8.9E-71 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 SUPERFAMILY SSF51338 29 88 1.94E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS26730 c7655eb36a6d8f5e3e73f93a17c4a7c9 434 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 427 2.4E-186 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 438 455 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 PIRSF PIRSF036643 2 731 7.1E-170 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 SUPERFAMILY SSF53706 6 500 6.15E-198 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Gene3D G3DSA:3.40.50.740 64 169 4.4E-18 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Pfam PF04324 BFD-like [2Fe-2S] binding domain 853 899 5.8E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 SMART SM00926 7 60 2.2E-19 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Gene3D G3DSA:2.20.25.90 7 58 8.1E-18 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 56 8.5E-18 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Gene3D G3DSA:2.40.40.20 550 707 5.1E-41 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Pfam PF01568 Molydopterin dinucleotide binding domain 591 700 7.6E-28 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Gene3D G3DSA:3.40.50.740 261 549 1.2E-88 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Gene3D G3DSA:3.40.228.10 170 260 2.7E-24 T 29-03-2018 AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 SUPERFAMILY SSF50692 562 706 1.18E-41 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS28135 1035905a13a48f0340626427d38ad8e4 908 Pfam PF00384 Molybdopterin oxidoreductase 67 492 4.3E-84 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 SUPERFAMILY SSF46894 129 229 3.12E-27 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 Gene3D G3DSA:3.40.50.2300 4 125 1.2E-32 T 29-03-2018 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 Gene3D G3DSA:1.10.10.10 126 234 1.1E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 SMART SM00448 7 117 1.1E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 SMART SM00862 152 228 1.3E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 3.4E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 Pfam PF00072 Response regulator receiver domain 9 117 3.1E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS28265 20b9af595139ee75a40b2ba19d705996 235 SUPERFAMILY SSF52172 8 131 4.13E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 SUPERFAMILY SSF56784 2 204 2.38E-29 T 29-03-2018 IPR023214 HAD-like domain AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 Gene3D G3DSA:1.20.1440.100 16 80 4.2E-24 T 29-03-2018 AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 1.4E-35 T 29-03-2018 AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 201 5.8E-51 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 Gene3D G3DSA:3.40.50.1000 81 208 8.7E-11 T 29-03-2018 IPR023214 HAD-like domain AM474_RS24640 41fea71757505275c32b71c3e4cd4b76 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 3.4E-41 T 29-03-2018 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 406 65.216 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 SUPERFAMILY SSF63380 105 270 6.64E-36 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 39 115 3.3E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Gene3D G3DSA:3.10.20.30 31 136 1.5E-21 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Gene3D G3DSA:3.40.50.80 256 400 5.1E-29 T 29-03-2018 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Pfam PF00970 Oxidoreductase FAD-binding domain 203 265 1.5E-9 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 SUPERFAMILY SSF54292 39 124 3.14E-23 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 PIRSF PIRSF000044 2 406 1.0E-231 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 406 5.2E-230 T 29-03-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Gene3D G3DSA:2.40.30.10 137 255 1.0E-32 T 29-03-2018 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 Pfam PF00175 Oxidoreductase NAD-binding domain 276 385 1.3E-17 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS04180 d3d4badb340755ee88f7a4f59cba3c29 406 SUPERFAMILY SSF52343 256 401 3.14E-37 T 29-03-2018 AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 Pfam PF08239 Bacterial SH3 domain 53 101 2.5E-10 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 SMART SM00287 41 104 6.4E-7 T 29-03-2018 IPR003646 SH3-like domain, bacterial-type AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 Gene3D G3DSA:2.40.50.110 29 91 3.8E-10 T 29-03-2018 AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 45 221 1.7E-42 T 29-03-2018 IPR016476 SH3 domain protein AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 PIRSF PIRSF006158 15 222 6.8E-75 T 29-03-2018 IPR016476 SH3 domain protein AM474_RS10645 cad7219e7a641ef9da46dadcb49fec4e 222 Gene3D G3DSA:1.20.5.50 92 184 2.0E-7 T 29-03-2018 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 SUPERFAMILY SSF46785 4 93 3.23E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 5.2E-21 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 SUPERFAMILY SSF54909 65 154 4.11E-21 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 SMART SM00344 5 114 1.9E-38 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 52 7.2E-18 T 29-03-2018 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 Gene3D G3DSA:1.10.10.10 6 57 3.3E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 Gene3D G3DSA:3.30.70.920 58 155 2.0E-26 T 29-03-2018 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 5.5E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 5.5E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS29460 4d5ed9a85f999996027eb74759cafded 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 5.5E-14 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS08985 08b92b5e48adcb7ae4ab51cc77799b4a 229 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM474_RS08985 08b92b5e48adcb7ae4ab51cc77799b4a 229 Gene3D G3DSA:2.160.10.10 14 192 1.7E-33 T 29-03-2018 AM474_RS08985 08b92b5e48adcb7ae4ab51cc77799b4a 229 SUPERFAMILY SSF51161 35 192 2.91E-37 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS08985 08b92b5e48adcb7ae4ab51cc77799b4a 229 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 5.6E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS08295 97e433627c92b9410774554092006d0e 314 SUPERFAMILY SSF46785 1 86 1.36E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08295 97e433627c92b9410774554092006d0e 314 Pfam PF03466 LysR substrate binding domain 87 290 1.9E-32 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS08295 97e433627c92b9410774554092006d0e 314 Gene3D G3DSA:1.10.10.10 1 83 3.7E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08295 97e433627c92b9410774554092006d0e 314 SUPERFAMILY SSF53850 91 290 7.14E-30 T 29-03-2018 AM474_RS08295 97e433627c92b9410774554092006d0e 314 Gene3D G3DSA:3.40.190.10 88 174 2.9E-15 T 29-03-2018 AM474_RS08295 97e433627c92b9410774554092006d0e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08295 97e433627c92b9410774554092006d0e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08295 97e433627c92b9410774554092006d0e 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08295 97e433627c92b9410774554092006d0e 314 Gene3D G3DSA:3.40.190.10 175 264 6.0E-18 T 29-03-2018 AM474_RS08295 97e433627c92b9410774554092006d0e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.7E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 PIRSF PIRSF000429 1 394 4.5E-126 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 4.3E-133 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 SUPERFAMILY SSF53901 1 265 7.84E-71 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 Gene3D G3DSA:3.40.47.10 259 390 2.4E-29 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 Gene3D G3DSA:3.40.47.10 1 140 5.8E-27 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 SUPERFAMILY SSF53901 271 391 1.73E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 Pfam PF00108 Thiolase, N-terminal domain 4 261 3.1E-67 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.7E-45 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS06670 cdd8efa0d8ae1ac5fa89c6d3ed25fb07 394 Gene3D G3DSA:3.40.47.10 144 258 6.3E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 252 6.7E-82 T 29-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 SUPERFAMILY SSF53850 49 243 3.63E-36 T 29-03-2018 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 277 2.9E-70 T 29-03-2018 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 Gene3D G3DSA:3.40.190.10 30 128 5.9E-7 T 29-03-2018 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 Gene3D G3DSA:3.40.190.10 129 274 8.2E-28 T 29-03-2018 AM474_RS06290 64280f0f51b3b5c46a68458216c22bdc 334 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 2 289 1.1E-99 T 29-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 AM474_RS24440 be207b6edc9524062cf971cee6cde1b3 398 Gene3D G3DSA:3.30.70.270 219 395 3.8E-60 T 29-03-2018 AM474_RS24440 be207b6edc9524062cf971cee6cde1b3 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 387 1.2E-52 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24440 be207b6edc9524062cf971cee6cde1b3 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 384 1.6E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24440 be207b6edc9524062cf971cee6cde1b3 398 SMART SM00267 215 388 3.1E-66 T 29-03-2018 IPR000160 GGDEF domain AM474_RS24440 be207b6edc9524062cf971cee6cde1b3 398 SUPERFAMILY SSF55073 231 387 1.8E-50 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS14925 d860cbf01aadc977b6dc6d33f26e6936 262 SUPERFAMILY SSF52540 1 253 1.32E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14925 d860cbf01aadc977b6dc6d33f26e6936 262 Pfam PF13614 AAA domain 3 178 3.6E-64 T 29-03-2018 IPR025669 AAA domain AM474_RS14925 d860cbf01aadc977b6dc6d33f26e6936 262 PIRSF PIRSF009320 2 85 4.3E-14 T 29-03-2018 AM474_RS14925 d860cbf01aadc977b6dc6d33f26e6936 262 PIRSF PIRSF009320 87 260 1.2E-7 T 29-03-2018 AM474_RS14925 d860cbf01aadc977b6dc6d33f26e6936 262 Gene3D G3DSA:3.40.50.300 1 261 4.2E-60 T 29-03-2018 AM474_RS07075 ad1060c33f6178afa57079935796a7f7 391 Gene3D G3DSA:3.40.50.1110 66 226 0.0051 T 29-03-2018 AM474_RS07075 ad1060c33f6178afa57079935796a7f7 391 Gene3D G3DSA:3.40.50.1110 282 375 0.29 T 29-03-2018 AM474_RS07075 ad1060c33f6178afa57079935796a7f7 391 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 85 355 7.3E-100 T 29-03-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 111 5.6E-43 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 Pfam PF04358 DsrC like protein 6 111 3.6E-36 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 PIRSF PIRSF006223 4 111 5.9E-33 T 29-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 Gene3D G3DSA:3.30.1420.10 4 41 1.7E-15 T 29-03-2018 AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 Gene3D G3DSA:1.10.10.370 42 110 2.9E-26 T 29-03-2018 AM474_RS00880 c20170852f7434f908c4f3ff41eb573e 111 SUPERFAMILY SSF69721 2 111 9.42E-35 T 29-03-2018 IPR025526 DsrC-like domain AM474_RS31200 0650aefbc3c25026d8e688b78dba7099 121 Gene3D G3DSA:2.60.120.10 26 121 1.7E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS31200 0650aefbc3c25026d8e688b78dba7099 121 SUPERFAMILY SSF51182 29 117 2.89E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS31200 0650aefbc3c25026d8e688b78dba7099 121 Pfam PF05899 Protein of unknown function (DUF861) 44 117 2.7E-17 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 SUPERFAMILY SSF56266 14 402 2.49E-131 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 153.127 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 405 5.9E-114 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 Gene3D G3DSA:3.60.70.12 8 276 2.7E-96 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 Pfam PF01960 ArgJ family 21 405 2.3E-136 T 29-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS21385 564362d3dfe65e4556fe467bb034416f 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 0.0 T 29-03-2018 AM474_RS07805 03050efe618347b950db3658e63217ab 156 SUPERFAMILY SSF46955 1 113 2.93E-37 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS07805 03050efe618347b950db3658e63217ab 156 Pfam PF13411 MerR HTH family regulatory protein 1 68 5.6E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS07805 03050efe618347b950db3658e63217ab 156 Gene3D G3DSA:1.10.1660.10 57 135 2.4E-20 T 29-03-2018 AM474_RS07805 03050efe618347b950db3658e63217ab 156 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.3E-56 T 29-03-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AM474_RS07805 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS07805 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS07805 03050efe618347b950db3658e63217ab 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS07805 03050efe618347b950db3658e63217ab 156 Gene3D G3DSA:1.10.1660.10 1 56 5.5E-24 T 29-03-2018 AM474_RS07805 03050efe618347b950db3658e63217ab 156 SMART SM00422 1 70 4.2E-31 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 Gene3D G3DSA:3.40.50.720 211 362 7.5E-41 T 29-03-2018 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 284 295 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 411 431 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 357 376 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 331 347 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 395 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 233 3.7E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 215 388 5.0E-7 T 29-03-2018 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 344 372 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 221 445 2.9E-50 T 29-03-2018 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 Gene3D G3DSA:3.40.50.720 363 449 8.4E-21 T 29-03-2018 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 SUPERFAMILY SSF51735 211 449 1.39E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 Gene3D G3DSA:3.40.50.720 124 203 0.17 T 29-03-2018 AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 284 295 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 337 345 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS19295 c458068aaf6f3517392d131f3b7b2b37 451 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 357 376 2.3E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 Gene3D G3DSA:3.40.50.300 1 274 1.1E-79 T 29-03-2018 AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 Pfam PF00005 ABC transporter 18 164 1.2E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.4E-121 T 29-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 SUPERFAMILY SSF52540 3 243 1.77E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 SUPERFAMILY SSF50331 235 324 7.37E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 Pfam PF12857 TOBE-like domain 270 321 1.0E-11 T 29-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 AM474_RS13350 e1627e88c41fb13c5c2429864ef65952 329 SMART SM00382 27 214 2.9E-20 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 137 184 9.55E-29 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 276 332 9.55E-29 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82866 298 498 8.76E-51 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 576 682 1.36E-28 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82866 842 1037 1.31E-45 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Pfam PF00873 AcrB/AcrD/AcrF family 4 1038 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 40 134 4.45E-26 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:3.30.2090.10 183 277 9.3E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:3.30.70.1430 40 142 2.2E-26 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82714 733 819 8.5E-23 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.9E-88 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 819 868 4.97E-29 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82693 683 732 4.97E-29 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:3.30.70.1440 683 777 3.3E-25 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:3.30.70.1320 778 856 3.0E-9 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:3.30.70.1430 580 679 1.7E-19 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 SUPERFAMILY SSF82714 185 274 2.75E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:1.20.1640.10 857 1040 1.7E-40 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 Gene3D G3DSA:1.20.1640.10 278 500 9.5E-49 T 29-03-2018 AM474_RS08365 e2ff509bdfb7f57567a23fee546d802a 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1050 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS09385 492b1e9263b091b7b035637304849a98 393 SUPERFAMILY SSF103473 7 387 2.35E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS09385 492b1e9263b091b7b035637304849a98 393 Pfam PF07690 Major Facilitator Superfamily 21 234 8.6E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS09385 492b1e9263b091b7b035637304849a98 393 Gene3D G3DSA:1.20.1250.20 3 197 1.3E-26 T 29-03-2018 AM474_RS09385 492b1e9263b091b7b035637304849a98 393 Gene3D G3DSA:1.20.1250.20 199 388 9.1E-16 T 29-03-2018 AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 SUPERFAMILY SSF53850 88 299 6.67E-41 T 29-03-2018 AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 Pfam PF03466 LysR substrate binding domain 88 294 3.7E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.3E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:3.40.190.10 177 265 1.4E-26 T 29-03-2018 AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:1.10.10.10 1 84 1.2E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 Gene3D G3DSA:3.40.190.10 88 176 1.4E-17 T 29-03-2018 AM474_RS07160 389f4d1ab6f79689ea0a3d056794389e 306 SUPERFAMILY SSF46785 2 112 3.03E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 Gene3D G3DSA:3.40.50.150 64 261 1.8E-40 T 29-03-2018 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 2.9E-24 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 218 241 2.9E-24 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 58 70 2.9E-24 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.9E-24 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 PRINTS PR00996 Glutamate methyltransferase family signature 199 213 2.9E-24 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 SMART SM00138 3 259 7.6E-40 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 Gene3D G3DSA:1.10.155.10 2 62 1.1E-4 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 SUPERFAMILY SSF48452 330 415 1.82E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 SUPERFAMILY SSF53335 65 253 3.12E-44 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 240 7.5E-37 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM474_RS07890 a69caeec3fbb5678f1b3e558feb9fa5d 422 Gene3D G3DSA:1.25.40.10 283 421 7.0E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SUPERFAMILY SSF47384 404 484 1.12E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 644 3.7E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SUPERFAMILY SSF55874 472 642 2.62E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SMART SM00388 418 483 5.3E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Pfam PF00072 Response regulator receiver domain 670 780 4.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Pfam PF00512 His Kinase A (phospho-acceptor) domain 419 482 1.7E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Gene3D G3DSA:1.10.287.130 408 478 1.4E-14 T 29-03-2018 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SMART SM00387 530 645 1.2E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Pfam PF07696 7TMR-DISM extracellular 2 32 171 3.4E-36 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SMART SM00448 668 781 5.5E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Gene3D G3DSA:3.40.50.2300 661 789 4.9E-42 T 29-03-2018 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Gene3D G3DSA:3.30.565.10 487 650 2.1E-41 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 Pfam PF07695 7TM diverse intracellular signalling 184 386 3.3E-56 T 29-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AM474_RS09745 8a975048075a96afddcc624bc5beab6b 795 SUPERFAMILY SSF52172 667 785 1.05E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS08260 b73cbdad8b36ca207381b61ba2305f4f 816 Gene3D G3DSA:3.40.50.300 282 768 1.7E-32 T 29-03-2018 AM474_RS08260 b73cbdad8b36ca207381b61ba2305f4f 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 388 5.6E-13 T 29-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AM474_RS08260 b73cbdad8b36ca207381b61ba2305f4f 816 SMART SM00382 440 704 2.0E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS08260 b73cbdad8b36ca207381b61ba2305f4f 816 SUPERFAMILY SSF52540 397 739 9.81E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 9.2E-56 T 29-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 Pfam PF00411 Ribosomal protein S11 19 128 2.2E-51 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.706 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 SUPERFAMILY SSF53137 15 129 2.09E-47 T 29-03-2018 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 Gene3D G3DSA:3.30.420.80 5 129 3.3E-45 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 PIRSF PIRSF002131 1 129 1.7E-53 T 29-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM474_RS11055 6612f1505ad78f0c94ed2173877365bd 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 29-03-2018 IPR018102 Ribosomal S11, conserved site AM474_RS12315 472d5d95c1200ea1f66335956663a451 134 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 31 130 8.9E-10 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS12315 472d5d95c1200ea1f66335956663a451 134 Gene3D G3DSA:3.10.129.10 4 134 6.8E-27 T 29-03-2018 AM474_RS12315 472d5d95c1200ea1f66335956663a451 134 SUPERFAMILY SSF54637 3 132 2.16E-29 T 29-03-2018 IPR029069 HotDog domain AM474_RS12315 472d5d95c1200ea1f66335956663a451 134 Pfam PF03061 Thioesterase superfamily 48 124 5.2E-16 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS29570 09df63253aff52ff0743c7b95e81de3c 317 Pfam PF04773 FecR protein 114 205 1.2E-20 T 29-03-2018 IPR006860 FecR protein AM474_RS29570 09df63253aff52ff0743c7b95e81de3c 317 PIRSF PIRSF018266 1 317 5.2E-83 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS29570 09df63253aff52ff0743c7b95e81de3c 317 Pfam PF16220 Domain of unknown function (DUF4880) 11 50 4.2E-12 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS04200 093caa195848d9a6f5173344849079dc 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.626 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM474_RS04200 093caa195848d9a6f5173344849079dc 403 PIRSF PIRSF016055 1 403 1.4E-204 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM474_RS04200 093caa195848d9a6f5173344849079dc 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 1.0E-197 T 29-03-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM474_RS04200 093caa195848d9a6f5173344849079dc 403 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 3.1E-110 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 Pfam PF00027 Cyclic nucleotide-binding domain 152 234 1.1E-21 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 PRINTS PR00103 cAMP-dependent protein kinase signature 194 203 1.8E-6 T 29-03-2018 AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 1.8E-6 T 29-03-2018 AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 PRINTS PR00103 cAMP-dependent protein kinase signature 154 168 1.8E-6 T 29-03-2018 AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 PRINTS PR00103 cAMP-dependent protein kinase signature 206 217 1.8E-6 T 29-03-2018 AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 SUPERFAMILY SSF51206 151 259 3.4E-28 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 Gene3D G3DSA:2.60.120.10 140 261 1.2E-27 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 SMART SM00100 128 246 6.7E-19 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 Gene3D G3DSA:2.60.120.10 13 139 0.035 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS19740 f60f2e85160c43de0767da04d3aa6550 265 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 160 176 - T 29-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 Pfam PF13412 Winged helix-turn-helix DNA-binding 14 60 3.7E-23 T 29-03-2018 AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 Pfam PF01037 Lrp/AsnC ligand binding domain 80 155 1.9E-22 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 Gene3D G3DSA:1.10.10.10 8 64 2.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 Gene3D G3DSA:3.30.70.920 66 165 6.3E-26 T 29-03-2018 AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 SUPERFAMILY SSF46785 5 132 3.13E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 SMART SM00344 14 124 2.0E-43 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 3.2E-19 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 3.2E-19 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS09695 dd489196d53138eeafbe766819b3b55f 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 3.2E-19 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 PIRSF PIRSF000521 37 147 0.17 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 PIRSF PIRSF000521 197 447 1.3E-14 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.90.1150.10 334 448 5.8E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 Pfam PF00202 Aminotransferase class-III 34 443 1.1E-78 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 SUPERFAMILY SSF53383 28 445 4.0E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.40.640.10 80 333 2.5E-66 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS14125 86d10632911fdfe0673bb43526fff6e0 448 Gene3D G3DSA:3.90.1150.10 11 79 0.004 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 Pfam PF08362 YcdC-like protein, C-terminal region 65 204 1.4E-54 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.3E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 SUPERFAMILY SSF46689 7 73 1.59E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 Gene3D G3DSA:1.10.10.60 4 60 7.8E-16 T 29-03-2018 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 Gene3D G3DSA:1.10.357.10 61 205 1.1E-16 T 29-03-2018 AM474_RS12520 e128ea8255adc36c8fb41e43ba72e88a 206 SUPERFAMILY SSF48498 81 204 9.64E-37 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 SUPERFAMILY SSF53271 69 305 6.07E-64 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 Gene3D G3DSA:3.40.50.2020 158 289 3.0E-41 T 29-03-2018 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 313 2.2E-32 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 2.1E-48 T 29-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 Gene3D G3DSA:3.40.50.2020 1 157 4.7E-66 T 29-03-2018 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 48.286 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 313 8.0E-124 T 29-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 SMART SM01400 4 121 1.0E-76 T 29-03-2018 AM474_RS19955 c52b2898cfaabd9cdd6c9f648cf29019 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 29-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AM474_RS05370 2b909a7024910c291b34dae22f65e403 184 Gene3D G3DSA:3.40.50.360 1 184 6.4E-37 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05370 2b909a7024910c291b34dae22f65e403 184 SUPERFAMILY SSF52218 1 178 6.95E-42 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05370 2b909a7024910c291b34dae22f65e403 184 Pfam PF03358 NADPH-dependent FMN reductase 41 118 6.3E-8 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS25910 94d9dad5ad558bd382b60fc7d72f298f 157 Pfam PF04191 Phospholipid methyltransferase 45 146 7.3E-14 T 29-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 AM474_RS25910 94d9dad5ad558bd382b60fc7d72f298f 157 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 116 157 3.0E-7 T 29-03-2018 AM474_RS23950 64c1f89a27186f6a3e414f7e5f3d2e30 135 Pfam PF03061 Thioesterase superfamily 51 121 1.1E-12 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS23950 64c1f89a27186f6a3e414f7e5f3d2e30 135 SUPERFAMILY SSF54637 11 130 9.72E-28 T 29-03-2018 IPR029069 HotDog domain AM474_RS23950 64c1f89a27186f6a3e414f7e5f3d2e30 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 126 2.0E-16 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS23950 64c1f89a27186f6a3e414f7e5f3d2e30 135 Gene3D G3DSA:3.10.129.10 6 135 1.4E-24 T 29-03-2018 AM474_RS08740 27c568a6a4c043ae8a673f4938cd95c9 66 SUPERFAMILY SSF140319 2 64 4.18E-25 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM474_RS08740 27c568a6a4c043ae8a673f4938cd95c9 66 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.8E-30 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM474_RS08740 27c568a6a4c043ae8a673f4938cd95c9 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 5.5E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM474_RS08740 27c568a6a4c043ae8a673f4938cd95c9 66 PIRSF PIRSF039003 3 66 5.1E-33 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM474_RS08740 27c568a6a4c043ae8a673f4938cd95c9 66 Gene3D G3DSA:1.10.10.600 2 64 3.0E-31 T 29-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 66 78 7.6E-12 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 35 51 7.6E-12 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PRINTS PR01591 DNA-binding protein FIS signature 51 66 7.6E-12 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM474_RS18945 d22432bf89785330dd5b954688982907 107 SUPERFAMILY SSF46689 24 106 8.96E-23 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 87 107 2.2E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 87 2.2E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS18945 d22432bf89785330dd5b954688982907 107 Pfam PF02954 Bacterial regulatory protein, Fis family 66 104 8.5E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS18945 d22432bf89785330dd5b954688982907 107 PIRSF PIRSF002097 9 107 7.1E-42 T 29-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 AM474_RS18945 d22432bf89785330dd5b954688982907 107 Gene3D G3DSA:1.10.10.60 11 106 4.8E-20 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 907 1010 5.2E-32 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 2.6E-77 T 29-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1011 1040 4.8E-6 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SUPERFAMILY SSF64484 1133 1363 0.0 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SUPERFAMILY SSF64484 16 944 0.0 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 4.4E-20 T 29-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 381 2.2E-7 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 2.5E-28 T 29-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 SMART SM00663 235 514 5.7E-185 T 29-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.40.20 346 488 4.8E-40 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 4.9E-30 T 29-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 14 1387 19.056 T 29-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 2.4E-90 T 29-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1153 1213 5.5E-15 T 29-03-2018 AM474_RS11200 f8ce6d5d0ac39ad4f1cb133c06301d79 1399 Gene3D G3DSA:2.40.50.100 1041 1123 7.2E-11 T 29-03-2018 AM474_RS03200 bcf521ae4d28b6c3f07935ecdc22272b 135 Pfam PF12680 SnoaL-like domain 8 117 1.4E-18 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS03200 bcf521ae4d28b6c3f07935ecdc22272b 135 SUPERFAMILY SSF54427 1 132 1.94E-28 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS03200 bcf521ae4d28b6c3f07935ecdc22272b 135 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 5 132 6.3E-40 T 29-03-2018 IPR011721 Conserved hypothetical protein CHP02096 AM474_RS03200 bcf521ae4d28b6c3f07935ecdc22272b 135 Gene3D G3DSA:3.10.450.50 2 135 3.5E-25 T 29-03-2018 AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 SUPERFAMILY SSF53474 1 275 5.09E-62 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 Gene3D G3DSA:3.40.50.1820 1 276 2.2E-70 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.2E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 6.2E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 6.2E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS01445 6819ac26c117e44347677bdb0f398c47 276 Pfam PF00561 alpha/beta hydrolase fold 24 256 1.6E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 Pfam PF03466 LysR substrate binding domain 89 296 2.0E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:1.10.10.10 1 85 4.5E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 SUPERFAMILY SSF46785 1 86 1.26E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 SUPERFAMILY SSF53850 91 297 2.02E-31 T 29-03-2018 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.2E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:3.40.190.10 86 182 2.9E-17 T 29-03-2018 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13815 2161b4ac421a51f37db9218a9c9e6e16 305 Gene3D G3DSA:3.40.190.10 183 265 2.4E-8 T 29-03-2018 AM474_RS23995 4ebbc3291a0385edcb19ed2d05f8a670 529 Pfam PF00171 Aldehyde dehydrogenase family 51 511 4.5E-127 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23995 4ebbc3291a0385edcb19ed2d05f8a670 529 Gene3D G3DSA:3.40.605.10 31 300 8.2E-74 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23995 4ebbc3291a0385edcb19ed2d05f8a670 529 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS23995 4ebbc3291a0385edcb19ed2d05f8a670 529 Gene3D G3DSA:3.40.309.10 301 498 7.7E-50 T 29-03-2018 AM474_RS23995 4ebbc3291a0385edcb19ed2d05f8a670 529 SUPERFAMILY SSF53720 50 517 1.7E-130 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.539 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 Gene3D G3DSA:1.10.3880.10 2 89 3.6E-43 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 SUPERFAMILY SSF111148 1 89 2.62E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 74 2.0E-39 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS17110 46575be49be3b252d5714d477aa7887d 90 PIRSF PIRSF029827 1 90 9.1E-41 T 29-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Gene3D G3DSA:2.160.20.10 46 347 5.6E-56 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 87 160 1.1E-24 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 SUPERFAMILY SSF51126 45 339 4.71E-49 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Pfam PF07581 The GLUG motif 1035 1060 1.9E-4 T 29-03-2018 IPR011493 GLUG AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Pfam PF07581 The GLUG motif 1209 1234 1.7E-5 T 29-03-2018 IPR011493 GLUG AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Pfam PF07581 The GLUG motif 1121 1147 0.0011 T 29-03-2018 IPR011493 GLUG AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Pfam PF05860 haemagglutination activity domain 53 164 3.8E-28 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 2.3E-8 T 29-03-2018 IPR024973 ESPR domain AM474_RS20660 1619a0eefd15d0ab0897f2621c7ac363 1417 SMART SM00912 51 165 4.0E-45 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS16015 4f2c4fd5c3816c8b956e4ff56fa01e10 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AM474_RS16015 4f2c4fd5c3816c8b956e4ff56fa01e10 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 30.486 T 29-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM474_RS16015 4f2c4fd5c3816c8b956e4ff56fa01e10 296 Pfam PF01040 UbiA prenyltransferase family 34 278 1.2E-65 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM474_RS16015 4f2c4fd5c3816c8b956e4ff56fa01e10 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 18 293 3.5E-106 T 29-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 192 5.3E-5 T 29-03-2018 AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 Pfam PF00106 short chain dehydrogenase 7 202 2.3E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 Gene3D G3DSA:3.40.50.720 1 44 1.9E-9 T 29-03-2018 AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 Gene3D G3DSA:3.40.50.720 45 255 2.2E-49 T 29-03-2018 AM474_RS00065 d45a94331ff929a7adedc3d559ef2bb2 255 SUPERFAMILY SSF51735 3 250 1.1E-65 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS16180 57cd612fca60160b09724490e6f3095e 402 Gene3D G3DSA:3.20.20.10 35 269 9.5E-28 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16180 57cd612fca60160b09724490e6f3095e 402 Pfam PF01168 Alanine racemase, N-terminal domain 33 271 5.6E-25 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16180 57cd612fca60160b09724490e6f3095e 402 SUPERFAMILY SSF51419 34 271 2.94E-20 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 SUPERFAMILY SSF53671 4 334 6.94E-100 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 Gene3D G3DSA:3.40.50.1370 6 162 4.8E-54 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 4.2E-54 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 3.6E-134 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 1.0E-30 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 81.239 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 3.2E-25 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.3E-45 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM474_RS16980 eda62eebef81a4cefa04693adb67a9c9 336 Gene3D G3DSA:3.40.50.1370 163 335 5.0E-52 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS21620 06412cfa470b85e5bb7f25ba07a5d8ac 80 SUPERFAMILY SSF46785 1 72 1.21E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21620 06412cfa470b85e5bb7f25ba07a5d8ac 80 Gene3D G3DSA:1.10.10.10 1 76 1.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21620 06412cfa470b85e5bb7f25ba07a5d8ac 80 Pfam PF09012 FeoC like transcriptional regulator 3 67 1.2E-13 T 29-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 Gene3D G3DSA:3.90.1150.10 330 452 1.3E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 49.812 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 Pfam PF00202 Aminotransferase class-III 28 439 1.8E-121 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 SUPERFAMILY SSF53383 10 442 1.64E-130 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 Gene3D G3DSA:3.90.1150.10 3 185 9.7E-47 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 442 6.2E-175 T 29-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM474_RS12605 7f08bc2c025527648e189c51b8b2e7d2 467 Gene3D G3DSA:3.40.640.10 193 329 7.3E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS03870 6b76023a82d4fdbaeefccbf9196d7ac2 193 Gene3D G3DSA:1.20.950.20 2 193 1.5E-24 T 29-03-2018 AM474_RS03870 6b76023a82d4fdbaeefccbf9196d7ac2 193 Pfam PF01292 Prokaryotic cytochrome b561 7 188 2.9E-25 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS03870 6b76023a82d4fdbaeefccbf9196d7ac2 193 SUPERFAMILY SSF81342 5 190 4.63E-22 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Gene3D G3DSA:1.10.540.10 1 126 2.5E-42 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 2.1E-39 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 3.3E-39 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Gene3D G3DSA:1.20.140.10 227 393 1.1E-52 T 29-03-2018 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 SUPERFAMILY SSF47203 234 391 3.22E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 SUPERFAMILY SSF56645 6 248 2.49E-89 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Gene3D G3DSA:2.40.110.10 127 226 5.0E-42 T 29-03-2018 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 PIRSF PIRSF016578 14 393 2.5E-18 T 29-03-2018 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS00645 a129201f61a7fd57ad031fef826ac82e 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.0E-26 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Pfam PF00563 EAL domain 341 575 2.2E-69 T 29-03-2018 IPR001633 EAL domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Gene3D G3DSA:3.20.20.450 333 587 3.4E-89 T 29-03-2018 IPR001633 EAL domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Pfam PF01590 GAF domain 28 157 3.5E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Gene3D G3DSA:3.30.70.270 181 332 2.1E-15 T 29-03-2018 AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 293 9.8E-6 T 29-03-2018 IPR000160 GGDEF domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SUPERFAMILY SSF141868 349 586 3.4E-80 T 29-03-2018 IPR001633 EAL domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SMART SM00065 26 169 0.0015 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SMART SM00052 334 580 4.7E-96 T 29-03-2018 IPR001633 EAL domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SUPERFAMILY SSF55781 28 164 6.28E-25 T 29-03-2018 IPR029016 GAF domain-like AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SUPERFAMILY SSF55073 172 307 1.41E-8 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 SMART SM00267 152 324 8.4E-4 T 29-03-2018 IPR000160 GGDEF domain AM474_RS00140 221962c6cb3e12c37a6d29f271443dc0 587 Gene3D G3DSA:3.30.450.40 19 180 2.0E-24 T 29-03-2018 IPR029016 GAF domain-like AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 Gene3D G3DSA:3.30.390.10 1 137 8.9E-45 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 139 1.3E-20 T 29-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 SUPERFAMILY SSF54826 1 143 1.13E-33 T 29-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 SMART SM00922 159 262 1.8E-22 T 29-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 Pfam PF13378 Enolase C-terminal domain-like 163 382 1.7E-55 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 Gene3D G3DSA:3.20.20.120 138 380 8.2E-56 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS30400 9889ffde2a6515fcf5d4ead9700f9f2c 391 SUPERFAMILY SSF51604 127 388 4.06E-69 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 Gene3D G3DSA:3.40.190.10 171 258 9.5E-16 T 29-03-2018 AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 SUPERFAMILY SSF53850 86 281 3.8E-37 T 29-03-2018 AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 Gene3D G3DSA:3.40.190.10 86 170 1.2E-15 T 29-03-2018 AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 SUPERFAMILY SSF46785 3 109 5.05E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 7.2E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 Pfam PF03466 LysR substrate binding domain 85 281 1.0E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22240 f2dad3bd3a4a78ab95c72c635ab743b4 284 Gene3D G3DSA:1.10.10.10 1 82 6.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29775 cb8446b44003afb032999206390ce104 282 SUPERFAMILY SSF53335 12 191 1.16E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS29775 cb8446b44003afb032999206390ce104 282 Gene3D G3DSA:3.40.50.150 2 213 2.9E-26 T 29-03-2018 AM474_RS29775 cb8446b44003afb032999206390ce104 282 Pfam PF13649 Methyltransferase domain 41 136 1.7E-13 T 29-03-2018 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.40.50.20 1 83 3.3E-21 T 29-03-2018 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF52440 2 94 2.45E-22 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF56059 97 292 2.47E-56 T 29-03-2018 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 SUPERFAMILY SSF51246 297 356 1.26E-13 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 348 1.1E-108 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.526 T 29-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 Pfam PF02222 ATP-grasp domain 106 272 2.1E-57 T 29-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.30.1490.20 112 174 5.0E-20 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS15650 1c71a762ed2728f66cb3c1db1b2ed866 360 Gene3D G3DSA:3.30.470.20 175 360 2.2E-27 T 29-03-2018 AM474_RS19800 94a6b7ce34d7cd8ed3032681c0c1ca8e 337 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 271 2.9E-30 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS19800 94a6b7ce34d7cd8ed3032681c0c1ca8e 337 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 337 55.451 T 29-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 AM474_RS19800 94a6b7ce34d7cd8ed3032681c0c1ca8e 337 SUPERFAMILY SSF56524 83 333 2.62E-91 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS19800 94a6b7ce34d7cd8ed3032681c0c1ca8e 337 Gene3D G3DSA:3.90.420.10 70 296 7.5E-59 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS04050 c4385b107294392e57d6b133159bf121 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.732 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS04050 c4385b107294392e57d6b133159bf121 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.8E-19 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS04050 c4385b107294392e57d6b133159bf121 60 Pfam PF01783 Ribosomal L32p protein family 2 56 3.4E-20 T 29-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS04050 c4385b107294392e57d6b133159bf121 60 SUPERFAMILY SSF57829 2 55 9.16E-18 T 29-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 SUPERFAMILY SSF101386 147 245 1.6E-26 T 29-03-2018 AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 TIGRFAM TIGR00444 mazG: MazG family protein 10 267 3.9E-97 T 29-03-2018 IPR011551 NTP pyrophosphohydrolase MazG AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 Gene3D G3DSA:1.10.287.1080 3 130 6.5E-36 T 29-03-2018 AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 Gene3D G3DSA:1.10.287.1080 149 273 2.3E-30 T 29-03-2018 AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 4.2E-26 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 180 236 4.7E-10 T 29-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AM474_RS23385 f0a93eb3391d9f746581e842d79244f6 276 SUPERFAMILY SSF101386 2 104 1.96E-23 T 29-03-2018 AM474_RS15840 9dfe4dd834806c4f85da8d254b490c49 294 Gene3D G3DSA:3.20.20.70 2 294 5.6E-104 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15840 9dfe4dd834806c4f85da8d254b490c49 294 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 5.0E-97 T 29-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 SUPERFAMILY SSF55821 2 202 5.72E-87 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 PIRSF PIRSF001259 1 365 1.8E-116 T 29-03-2018 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 Gene3D G3DSA:3.90.870.10 1 212 1.6E-95 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 SUPERFAMILY SSF142695 204 363 5.1E-40 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.0E-84 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.815 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 4.5E-75 T 29-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM474_RS10140 a61b96969e0063705c657fb40f85d175 365 Pfam PF00925 GTP cyclohydrolase II 208 363 7.7E-30 T 29-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 AM474_RS12070 8abb27d7832510305658e76238c9aa5f 465 Gene3D G3DSA:1.20.210.10 5 461 1.9E-73 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS12070 8abb27d7832510305658e76238c9aa5f 465 SUPERFAMILY SSF81442 12 458 2.75E-89 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS12070 8abb27d7832510305658e76238c9aa5f 465 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 5.4E-83 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS12070 8abb27d7832510305658e76238c9aa5f 465 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 203 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS00630 b5cd407370089d64c12ffbfc499e4d9f 554 Pfam PF06980 Protein of unknown function (DUF1302) 29 554 4.0E-106 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.40.50.20 1 117 3.4E-49 T 29-03-2018 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.30.1490.20 118 203 2.7E-21 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Gene3D G3DSA:3.30.470.20 204 443 3.2E-95 T 29-03-2018 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 SMART SM00878 334 440 1.2E-61 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 443 5.1E-190 T 29-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 2.4E-73 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF56059 82 346 1.1E-67 T 29-03-2018 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.1E-42 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 5.8E-41 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF52440 1 112 7.91E-45 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS15585 23417921b32004da26d70710c9d4dc01 471 SUPERFAMILY SSF51246 329 445 3.09E-43 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS29245 81328db103906a28e96c4d7ac460c61f 304 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 304 177.051 T 29-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AM474_RS29245 81328db103906a28e96c4d7ac460c61f 304 Pfam PF12706 Beta-lactamase superfamily domain 50 271 1.1E-48 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS29245 81328db103906a28e96c4d7ac460c61f 304 SUPERFAMILY SSF56281 1 304 2.12E-67 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS29245 81328db103906a28e96c4d7ac460c61f 304 Gene3D G3DSA:3.60.15.10 1 304 7.8E-43 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS29245 81328db103906a28e96c4d7ac460c61f 304 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 304 3.7E-146 T 29-03-2018 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 AM474_RS25785 bf8ddda57a24b61f417d911a5c01880e 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 7.5E-51 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS25785 bf8ddda57a24b61f417d911a5c01880e 302 SMART SM00062 38 271 1.1E-56 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS25785 bf8ddda57a24b61f417d911a5c01880e 302 Gene3D G3DSA:3.40.190.10 10 167 3.0E-29 T 29-03-2018 AM474_RS25785 bf8ddda57a24b61f417d911a5c01880e 302 Gene3D G3DSA:3.40.190.10 168 302 6.8E-18 T 29-03-2018 AM474_RS25785 bf8ddda57a24b61f417d911a5c01880e 302 SUPERFAMILY SSF53850 8 272 4.15E-64 T 29-03-2018 AM474_RS31640 682cca4fe0762d54854c504de1eb8636 305 Gene3D G3DSA:3.40.50.1980 24 187 7.8E-12 T 29-03-2018 AM474_RS31640 682cca4fe0762d54854c504de1eb8636 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 92 284 3.5E-13 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM474_RS31640 682cca4fe0762d54854c504de1eb8636 305 SUPERFAMILY SSF53807 35 300 4.91E-31 T 29-03-2018 AM474_RS31640 682cca4fe0762d54854c504de1eb8636 305 Gene3D G3DSA:3.40.50.1980 188 298 8.8E-4 T 29-03-2018 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 187 1.0E-59 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Gene3D G3DSA:1.10.1040.10 189 286 4.3E-20 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Gene3D G3DSA:1.10.1040.10 312 406 1.5E-15 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 190 281 6.0E-23 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 317 401 7.0E-7 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 SUPERFAMILY SSF48179 190 329 7.31E-24 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 SUPERFAMILY SSF48179 312 404 2.21E-21 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 SUPERFAMILY SSF51735 7 188 1.15E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS16895 aeaecad75490ebd5a7832a0d16034f90 411 Gene3D G3DSA:3.40.50.720 2 188 9.1E-53 T 29-03-2018 AM474_RS11090 11101dbfa1b79ca4a696cbadbf89c886 116 SUPERFAMILY SSF53137 4 114 3.71E-52 T 29-03-2018 AM474_RS11090 11101dbfa1b79ca4a696cbadbf89c886 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 116 1.1E-42 T 29-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11090 11101dbfa1b79ca4a696cbadbf89c886 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 27.195 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11090 11101dbfa1b79ca4a696cbadbf89c886 116 Gene3D G3DSA:3.30.420.100 1 116 1.2E-38 T 29-03-2018 AM474_RS11090 11101dbfa1b79ca4a696cbadbf89c886 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 2.9E-42 T 29-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS24095 58498e98261a26ce0bd1e5c33bed4e2b 392 Gene3D G3DSA:3.40.710.10 7 392 9.0E-85 T 29-03-2018 AM474_RS24095 58498e98261a26ce0bd1e5c33bed4e2b 392 Pfam PF00144 Beta-lactamase 29 384 1.4E-79 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS24095 58498e98261a26ce0bd1e5c33bed4e2b 392 SUPERFAMILY SSF56601 18 385 2.62E-79 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS30325 9058a68022eb80a660a21758b3045c57 531 Gene3D G3DSA:3.20.20.450 276 530 8.0E-72 T 29-03-2018 IPR001633 EAL domain AM474_RS30325 9058a68022eb80a660a21758b3045c57 531 SUPERFAMILY SSF141868 281 527 5.1E-66 T 29-03-2018 IPR001633 EAL domain AM474_RS30325 9058a68022eb80a660a21758b3045c57 531 SMART SM00052 274 519 2.5E-71 T 29-03-2018 IPR001633 EAL domain AM474_RS30325 9058a68022eb80a660a21758b3045c57 531 Pfam PF00563 EAL domain 281 513 2.9E-55 T 29-03-2018 IPR001633 EAL domain AM474_RS30325 9058a68022eb80a660a21758b3045c57 531 Pfam PF12792 CSS motif domain associated with EAL 46 241 4.5E-30 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.30.360.10 145 351 4.9E-59 T 29-03-2018 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 4.4E-63 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 Gene3D G3DSA:3.40.50.720 1 144 1.5E-20 T 29-03-2018 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 4.3E-197 T 29-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 29-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.434 T 29-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 SMART SM00859 3 122 6.3E-28 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 PIRSF PIRSF000148 1 370 2.2E-64 T 29-03-2018 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF55347 134 355 3.35E-76 T 29-03-2018 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 8.9E-25 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS04820 a8be0c31547178063df844cb7d4d0666 370 SUPERFAMILY SSF51735 1 147 1.16E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS11000 9a4e5aa655ab91e9c2a7fcb301e35664 251 Gene3D G3DSA:3.40.50.1820 1 243 8.7E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11000 9a4e5aa655ab91e9c2a7fcb301e35664 251 Pfam PF00975 Thioesterase domain 18 237 2.9E-60 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS11000 9a4e5aa655ab91e9c2a7fcb301e35664 251 SUPERFAMILY SSF53474 5 240 4.99E-46 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04235 a8970ff60c53c09b65f2442346004be5 332 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 230 247 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM474_RS04235 a8970ff60c53c09b65f2442346004be5 332 Gene3D G3DSA:3.20.20.300 2 308 1.1E-78 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS04235 a8970ff60c53c09b65f2442346004be5 332 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 294 7.9E-78 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS04235 a8970ff60c53c09b65f2442346004be5 332 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 4 330 49.618 T 29-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS04235 a8970ff60c53c09b65f2442346004be5 332 SUPERFAMILY SSF51445 3 287 3.37E-82 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS24035 74bd01565544218e0a899dacbe0a8795 164 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 32 156 0.002 T 29-03-2018 AM474_RS24035 74bd01565544218e0a899dacbe0a8795 164 SUPERFAMILY SSF117070 18 156 1.07E-31 T 29-03-2018 AM474_RS24035 74bd01565544218e0a899dacbe0a8795 164 SMART SM00769 38 157 8.1E-37 T 29-03-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 AM474_RS24035 74bd01565544218e0a899dacbe0a8795 164 Gene3D G3DSA:2.60.40.10 36 153 1.1E-20 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS24035 74bd01565544218e0a899dacbe0a8795 164 Pfam PF03168 Late embryogenesis abundant protein 59 153 9.1E-22 T 29-03-2018 IPR004864 Late embryogenesis abundant protein, LEA-14 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Gene3D G3DSA:1.10.8.60 367 439 3.4E-18 T 29-03-2018 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 SUPERFAMILY SSF52540 193 429 1.25E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 SUPERFAMILY SSF55781 24 172 1.22E-16 T 29-03-2018 IPR029016 GAF domain-like AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Pfam PF00158 Sigma-54 interaction domain 194 360 4.6E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Gene3D G3DSA:3.30.450.40 5 199 5.9E-22 T 29-03-2018 IPR029016 GAF domain-like AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Gene3D G3DSA:1.10.10.60 441 517 9.7E-11 T 29-03-2018 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Gene3D G3DSA:3.40.50.300 200 366 7.1E-32 T 29-03-2018 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 SMART SM00382 214 357 1.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Pfam PF02954 Bacterial regulatory protein, Fis family 479 509 5.7E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 SUPERFAMILY SSF46689 464 516 2.24E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 Pfam PF01590 GAF domain 25 159 2.5E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS01175 5afdcd506277c55067a93f336659fe85 517 SMART SM00065 22 170 1.5E-9 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 3.3E-69 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 Pfam PF13416 Bacterial extracellular solute-binding protein 44 331 5.1E-32 T 29-03-2018 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 PIRSF PIRSF019574 1 367 1.4E-142 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 Gene3D G3DSA:3.40.190.10 202 332 4.5E-20 T 29-03-2018 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 Gene3D G3DSA:3.40.190.10 20 201 3.3E-35 T 29-03-2018 AM474_RS13245 d0f2ae7d884bd1dcdc7ff7d634e3b0fb 367 SUPERFAMILY SSF53850 28 366 1.37E-104 T 29-03-2018 AM474_RS30405 6c2dc243e0dfb6515a0395da3881dda3 331 SUPERFAMILY SSF56529 112 316 9.01E-25 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS30405 6c2dc243e0dfb6515a0395da3881dda3 331 Gene3D G3DSA:3.90.850.10 90 321 9.4E-25 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS30405 6c2dc243e0dfb6515a0395da3881dda3 331 PIRSF PIRSF033905 1 331 1.9E-171 T 29-03-2018 IPR009645 Uncharacterised conserved protein GguC AM474_RS25950 020a8defec9653760448c7a50e3d0f21 205 SUPERFAMILY SSF46689 12 95 1.5E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25950 020a8defec9653760448c7a50e3d0f21 205 Gene3D G3DSA:1.10.357.10 69 205 7.4E-13 T 29-03-2018 AM474_RS25950 020a8defec9653760448c7a50e3d0f21 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 1.1E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25950 020a8defec9653760448c7a50e3d0f21 205 SUPERFAMILY SSF48498 90 204 1.7E-9 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS25950 020a8defec9653760448c7a50e3d0f21 205 Gene3D G3DSA:1.10.10.60 1 68 1.6E-13 T 29-03-2018 AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 357 7.7E-33 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 29-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 369 95.384 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 SUPERFAMILY SSF52540 1 234 6.81E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 SUPERFAMILY SSF52540 261 342 6.81E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 2.4E-115 T 29-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM474_RS14865 12a71182b688681f7ed2e06e5a45048b 369 Gene3D G3DSA:3.40.50.300 1 361 2.5E-27 T 29-03-2018 AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.1E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 38 1.8E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 Pfam PF08334 Type II secretion system (T2SS), protein G 41 147 3.7E-40 T 29-03-2018 IPR013545 Type II secretion system protein G AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 SUPERFAMILY SSF54523 45 147 2.09E-34 T 29-03-2018 AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 18 43 3.1E-16 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 PRINTS PR00813 Bacterial general secretion pathway protein G signature 54 72 3.1E-16 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 Gene3D G3DSA:3.30.700.10 32 147 1.5E-28 T 29-03-2018 AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22100 535e5c93fac504cf8b1ebbad95d742a0 149 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 148 4.6E-55 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM474_RS31425 3e07f7a4078a9fabab8089875016bf61 165 Pfam PF05638 Type VI secretion system effector, Hcp 11 138 5.3E-29 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS31425 3e07f7a4078a9fabab8089875016bf61 165 Gene3D G3DSA:2.30.110.20 3 164 1.6E-45 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS31425 3e07f7a4078a9fabab8089875016bf61 165 SUPERFAMILY SSF141452 10 162 4.05E-42 T 29-03-2018 IPR008514 Type VI secretion system effector, Hcp AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 5.0E-15 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 26.426 T 29-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 Pfam PF01197 Ribosomal protein L31 1 79 4.4E-24 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 SUPERFAMILY SSF143800 1 81 1.26E-21 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07360 cb353bcc222a794e627f63a3d138c065 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.4E-14 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 SUPERFAMILY SSF52540 10 245 1.73E-68 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 Gene3D G3DSA:3.40.50.300 7 272 2.8E-67 T 29-03-2018 AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 Pfam PF12704 MacB-like periplasmic core domain 291 507 4.1E-37 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 Pfam PF02687 FtsX-like permease family 570 656 1.4E-9 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 SMART SM00382 40 227 3.9E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31545 44e0a5a0a238c01743033390054f83dc 663 Pfam PF00005 ABC transporter 31 179 2.2E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF46689 9 76 4.14E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF13305 WHG domain 87 173 8.7E-8 T 29-03-2018 IPR025996 WHG domain AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 8.6E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 SUPERFAMILY SSF48498 87 195 1.14E-9 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 Gene3D G3DSA:1.10.10.60 2 66 6.0E-18 T 29-03-2018 AM474_RS03985 0e71736700f26cd0b7393ffc6f605ef9 212 Gene3D G3DSA:1.10.357.10 67 198 3.9E-12 T 29-03-2018 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Gene3D G3DSA:3.40.190.10 176 262 6.4E-15 T 29-03-2018 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Pfam PF03466 LysR substrate binding domain 87 289 3.7E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Gene3D G3DSA:1.10.10.10 1 87 7.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 SUPERFAMILY SSF46785 1 86 5.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 Gene3D G3DSA:3.40.190.10 88 175 1.3E-11 T 29-03-2018 AM474_RS16945 874b0b2df6d11fcf4565dc7fa5cb6f3f 306 SUPERFAMILY SSF53850 88 292 6.73E-33 T 29-03-2018 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 Gene3D G3DSA:2.170.130.10 35 182 4.6E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 715 732 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 Gene3D G3DSA:2.40.170.20 183 732 2.2E-82 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 9.7E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 Pfam PF00593 TonB dependent receptor 247 728 7.8E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 732 2.0E-110 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS25680 1dc19a8e0c2ee0ab99917d3c460f963e 732 SUPERFAMILY SSF56935 35 732 1.05E-131 T 29-03-2018 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 Gene3D G3DSA:2.60.300.12 11 116 2.6E-39 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 115 8.0E-38 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.764 T 29-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 3.1E-19 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS11320 89a293d9c9240aa1227f6e9246fb2872 116 SUPERFAMILY SSF89360 5 102 1.22E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS10110 61c6698467dff93aa250942601fba3a2 214 Gene3D G3DSA:2.40.70.10 92 202 1.7E-18 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS10110 61c6698467dff93aa250942601fba3a2 214 SUPERFAMILY SSF50630 98 201 3.5E-20 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS10110 61c6698467dff93aa250942601fba3a2 214 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 117 128 - T 29-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AM474_RS10110 61c6698467dff93aa250942601fba3a2 214 Pfam PF13975 gag-polyprotein putative aspartyl protease 107 198 1.2E-26 T 29-03-2018 AM474_RS10110 61c6698467dff93aa250942601fba3a2 214 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 94 211 1.4E-42 T 29-03-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AM474_RS03835 2720ccab19fd7d6652a2b047ae2f03f2 204 PIRSF PIRSF006324 1 203 5.2E-45 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS03835 2720ccab19fd7d6652a2b047ae2f03f2 204 Pfam PF01810 LysE type translocator 14 200 1.1E-29 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 352 1.7E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 334 1.7E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 301 1.7E-10 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:1.10.287.130 117 192 2.7E-14 T 29-03-2018 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00388 131 196 3.2E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 188 1.3E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF47384 125 193 5.3E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.450.20 3 114 1.5E-12 T 29-03-2018 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF00989 PAS fold 8 104 5.4E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Gene3D G3DSA:3.30.565.10 193 355 1.0E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00091 5 73 9.8E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55785 6 104 1.54E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 354 2.3E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SMART SM00387 235 355 2.7E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17245 3ab154335bc98ffbbadcad691cdd99a3 358 SUPERFAMILY SSF55874 198 353 9.56E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.547 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 Gene3D G3DSA:1.10.1200.10 1 78 5.1E-28 T 29-03-2018 AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 8.9E-37 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 SMART SM00823 Phosphopantetheine attachment site 5 77 0.0084 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 9.0E-13 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-17 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS04030 bf67608ca7d265aa4d65a517423f7750 78 SUPERFAMILY SSF47336 2 77 3.14E-24 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS13110 e6db86e77ddd0bc6532fbf957fa67911 309 Gene3D G3DSA:1.10.3720.10 21 303 1.7E-45 T 29-03-2018 AM474_RS13110 e6db86e77ddd0bc6532fbf957fa67911 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 297 2.1E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13110 e6db86e77ddd0bc6532fbf957fa67911 309 SUPERFAMILY SSF161098 19 300 4.39E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 37 211 6.7E-39 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 SMART SM00342 254 335 1.4E-11 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 Gene3D G3DSA:1.10.10.60 228 289 0.07 T 29-03-2018 AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 Pfam PF12833 Helix-turn-helix domain 261 337 1.9E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 Gene3D G3DSA:1.10.10.60 290 348 4.2E-8 T 29-03-2018 AM474_RS13210 1de3bc1583680fcee8ce23cf5d9d1902 350 SUPERFAMILY SSF46689 289 338 7.62E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 PIRSF PIRSF005496 1 836 0.0 T 29-03-2018 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 SUPERFAMILY SSF52540 30 437 1.58E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Pfam PF00271 Helicase conserved C-terminal domain 209 333 2.5E-14 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 SMART SM00487 5 189 2.1E-17 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Gene3D G3DSA:3.40.50.300 3 165 1.7E-23 T 29-03-2018 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 828 0.0 T 29-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 SMART SM00490 230 334 6.5E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Pfam PF08482 ATP-dependent helicase C-terminal 694 819 1.3E-45 T 29-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 SMART SM00847 393 496 2.0E-17 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Gene3D G3DSA:3.40.50.300 183 354 1.3E-46 T 29-03-2018 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Pfam PF04408 Helicase associated domain (HA2) 394 454 8.6E-12 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM474_RS09675 f013b6ddc68a94e751e9483c5aed60a2 837 Pfam PF00270 DEAD/DEAH box helicase 19 165 5.2E-7 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 56 171 1.2E-8 T 29-03-2018 AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 PRINTS PR00775 90kDa heat shock protein signature 56 78 2.3E-13 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 PRINTS PR00775 90kDa heat shock protein signature 140 162 2.3E-13 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 PRINTS PR00775 90kDa heat shock protein signature 209 227 2.3E-13 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 PRINTS PR00775 90kDa heat shock protein signature 191 208 2.3E-13 T 29-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 SUPERFAMILY SSF54211 256 479 1.21E-28 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 SUPERFAMILY SSF55874 36 232 9.99E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 Gene3D G3DSA:3.30.565.10 59 235 8.0E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 Pfam PF00183 Hsp90 protein 300 377 1.6E-8 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS24210 9e8a2918af56db107ed229bc8e2b69cf 636 PIRSF PIRSF002583 13 631 5.5E-97 T 29-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 4.5E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.40.50.80 200 332 2.2E-29 T 29-03-2018 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF63380 76 204 4.77E-23 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 205 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 211 230 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 236 245 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 6.4E-25 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF54292 1 98 1.97E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 SUPERFAMILY SSF52343 204 333 3.67E-35 T 29-03-2018 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Pfam PF00175 Oxidoreductase NAD-binding domain 212 314 1.9E-22 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Pfam PF00970 Oxidoreductase FAD-binding domain 109 202 1.4E-16 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:2.40.30.10 100 199 8.0E-23 T 29-03-2018 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 5.4E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 236 245 5.4E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 211 230 5.4E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 5.4E-8 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS32240 50884b91d844c92511462fce25c5ec42 337 Gene3D G3DSA:3.10.20.30 1 99 1.8E-22 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 Hamap MF_00970 Ribonuclease E [rne]. 1 1045 39.638 T 29-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 1.8E-167 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 Pfam PF00575 S1 RNA binding domain 36 116 6.3E-15 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 SMART SM00316 37 117 7.7E-13 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 Gene3D G3DSA:2.40.50.140 32 122 3.6E-31 T 29-03-2018 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 Pfam PF10150 Ribonuclease E/G family 119 388 1.0E-95 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM474_RS04085 a938ea5ccb9030463bf6a73998bee087 1057 SUPERFAMILY SSF50249 40 123 6.5E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS15225 9b337c935c99436850cf4fbe40075df9 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 224 5.9E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS15225 9b337c935c99436850cf4fbe40075df9 225 Gene3D G3DSA:1.10.3720.10 13 225 2.0E-31 T 29-03-2018 AM474_RS15225 9b337c935c99436850cf4fbe40075df9 225 SUPERFAMILY SSF161098 16 212 8.11E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS00370 dd28d3a391c66fcb895b427996600fd8 396 Gene3D G3DSA:3.40.47.10 11 136 0.38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00370 dd28d3a391c66fcb895b427996600fd8 396 SUPERFAMILY SSF53901 3 120 4.12E-19 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00370 dd28d3a391c66fcb895b427996600fd8 396 SUPERFAMILY SSF53901 196 393 4.12E-19 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00370 dd28d3a391c66fcb895b427996600fd8 396 Gene3D G3DSA:3.40.47.10 160 393 1.6E-26 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00370 dd28d3a391c66fcb895b427996600fd8 396 PIRSF PIRSF000429 4 396 5.3E-19 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS22620 e81de4de10985763e88207552144d5a9 395 Gene3D G3DSA:3.10.310.10 192 373 6.0E-75 T 29-03-2018 AM474_RS22620 e81de4de10985763e88207552144d5a9 395 Gene3D G3DSA:3.10.310.10 3 191 4.2E-81 T 29-03-2018 AM474_RS22620 e81de4de10985763e88207552144d5a9 395 Pfam PF04303 PrpF protein 6 391 1.5E-185 T 29-03-2018 IPR007400 PrpF protein AM474_RS22620 e81de4de10985763e88207552144d5a9 395 SUPERFAMILY SSF54506 189 393 3.92E-78 T 29-03-2018 AM474_RS22620 e81de4de10985763e88207552144d5a9 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 395 8.9E-238 T 29-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 AM474_RS22620 e81de4de10985763e88207552144d5a9 395 SUPERFAMILY SSF54506 3 181 3.61E-68 T 29-03-2018 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 PIRSF PIRSF500125 1 518 1.5E-283 T 29-03-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 SUPERFAMILY SSF56645 13 282 1.04E-81 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 Gene3D G3DSA:1.20.140.10 292 494 6.7E-63 T 29-03-2018 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 483 1.4E-62 T 29-03-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 Gene3D G3DSA:1.10.3140.10 14 151 1.4E-49 T 29-03-2018 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 29-03-2018 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 PIRSF PIRSF000331 11 501 1.9E-192 T 29-03-2018 IPR004925 HpaB/PvcC/4-BUDH AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 Gene3D G3DSA:2.40.110.10 152 283 1.2E-13 T 29-03-2018 AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 4.6E-93 T 29-03-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal AM474_RS10330 d9768c1cddf975566a975961f4162d09 520 SUPERFAMILY SSF47203 272 494 4.6E-45 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS03540 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 1 108 1.23E-25 T 29-03-2018 IPR029069 HotDog domain AM474_RS03540 c0c672958b9ccf28e91fa3723fcfca0c 265 Pfam PF13622 Thioesterase-like superfamily 20 263 3.1E-52 T 29-03-2018 AM474_RS03540 c0c672958b9ccf28e91fa3723fcfca0c 265 Gene3D G3DSA:3.10.129.10 136 263 1.3E-15 T 29-03-2018 AM474_RS03540 c0c672958b9ccf28e91fa3723fcfca0c 265 SUPERFAMILY SSF54637 123 263 2.4E-27 T 29-03-2018 IPR029069 HotDog domain AM474_RS03540 c0c672958b9ccf28e91fa3723fcfca0c 265 Gene3D G3DSA:3.10.129.10 1 110 1.0E-21 T 29-03-2018 AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 1.2E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 191 5.6E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 SUPERFAMILY SSF47616 78 205 2.56E-27 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 SUPERFAMILY SSF52833 6 104 1.1E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Gene3D G3DSA:1.20.1050.10 92 204 2.8E-17 T 29-03-2018 AM474_RS21245 7a01069d7bd9ceaeff32e2fa4867ad9a 205 Gene3D G3DSA:3.40.30.10 4 91 1.8E-22 T 29-03-2018 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 SUPERFAMILY SSF52540 29 222 2.46E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Gene3D G3DSA:3.40.50.300 1 166 2.2E-40 T 29-03-2018 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.5E-44 T 29-03-2018 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 SMART SM00382 37 179 7.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.9E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.9E-5 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Gene3D G3DSA:1.10.8.60 167 242 3.4E-17 T 29-03-2018 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 562 676 9.2E-17 T 29-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 2.2E-33 T 29-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 Gene3D G3DSA:1.20.272.10 243 362 8.4E-18 T 29-03-2018 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 SUPERFAMILY SSF48019 243 362 1.45E-33 T 29-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM474_RS26790 11a77504b543aecbedaac00805af3e9f 687 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 7.5E-131 T 29-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM474_RS14075 ef033a8188de7efaed0f7a95500cf938 298 PIRSF PIRSF028756 4 287 1.9E-130 T 29-03-2018 IPR016898 Polyphosphate kinase 2 AM474_RS14075 ef033a8188de7efaed0f7a95500cf938 298 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 257 9.7E-112 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related AM474_RS14075 ef033a8188de7efaed0f7a95500cf938 298 Gene3D G3DSA:3.40.50.300 6 278 4.5E-102 T 29-03-2018 AM474_RS14075 ef033a8188de7efaed0f7a95500cf938 298 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 30 257 5.7E-118 T 29-03-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 AM474_RS14075 ef033a8188de7efaed0f7a95500cf938 298 SUPERFAMILY SSF52540 62 248 2.4E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09755 fda5ab422866400c12fff1808aa3e162 209 Gene3D G3DSA:3.20.20.70 2 207 8.8E-42 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS09755 fda5ab422866400c12fff1808aa3e162 209 Pfam PF02581 Thiamine monophosphate synthase 6 186 1.9E-53 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS09755 fda5ab422866400c12fff1808aa3e162 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 197 1.4E-60 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS09755 fda5ab422866400c12fff1808aa3e162 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 207 24.907 T 29-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS09755 fda5ab422866400c12fff1808aa3e162 209 SUPERFAMILY SSF51391 3 200 1.23E-57 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS15690 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 Gene3D G3DSA:3.30.2270.10 1 89 5.6E-38 T 29-03-2018 AM474_RS15690 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 84 6.6E-37 T 29-03-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS15690 6dfd2b7d74ec1f3a7ec292d6587ba5a2 106 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 87 2.1E-40 T 29-03-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS07355 eae65437ed93f03f672c12b3ab00c495 50 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.637 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07355 eae65437ed93f03f672c12b3ab00c495 50 SUPERFAMILY SSF57840 1 41 3.92E-13 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07355 eae65437ed93f03f672c12b3ab00c495 50 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 1.3E-7 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07355 eae65437ed93f03f672c12b3ab00c495 50 Pfam PF00444 Ribosomal protein L36 1 41 1.2E-15 T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07355 eae65437ed93f03f672c12b3ab00c495 50 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 29-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 PIRSF PIRSF005624 2 203 1.6E-46 T 29-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 Gene3D G3DSA:3.40.50.300 4 202 1.3E-18 T 29-03-2018 AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 2.8E-35 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 SMART SM00382 4 183 0.0019 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 SUPERFAMILY SSF52540 3 197 1.79E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 201 5.4E-106 T 29-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM474_RS18735 8dbd58077ccb664652e3c36e743b7454 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 48.063 T 29-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 SUPERFAMILY SSF51735 5 258 3.29E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 Pfam PF00106 short chain dehydrogenase 5 190 1.9E-49 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 176 0.0092 T 29-03-2018 AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 Gene3D G3DSA:3.40.50.720 2 267 7.8E-56 T 29-03-2018 AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05685 fef2379fe989a36c1d6e63983bd99d02 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-26 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 18 184 7.2E-18 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF00005 ABC transporter 336 465 1.4E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 2 282 2.3E-49 T 29-03-2018 AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 344 511 9.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 SMART SM00382 26 245 2.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 297 526 2.06E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 Gene3D G3DSA:3.40.50.300 283 528 7.0E-49 T 29-03-2018 AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 SUPERFAMILY SSF52540 6 237 7.93E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29130 f700d94bb9faec3b04df0bcb0e13c43e 529 Pfam PF12848 ABC transporter 224 308 6.0E-21 T 29-03-2018 IPR032781 ABC-transporter extension domain AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF06628 Catalase-related immune-responsive 436 495 3.3E-11 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 SMART SM01060 34 414 2.6E-240 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PIRSF PIRSF038928 24 503 2.5E-174 T 29-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 Pfam PF00199 Catalase 34 411 4.4E-164 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 SUPERFAMILY SSF56634 29 503 1.57E-186 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 Gene3D G3DSA:2.40.180.10 21 381 2.6E-147 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 47 70 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 109 127 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 344 370 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 130 147 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 149 167 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS20270 4ce70b73173bf71848be4b223e781f2a 513 PRINTS PR00067 Catalase signature 312 339 1.5E-66 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 SMART SM00878 340 447 1.7E-54 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Gene3D G3DSA:3.30.1490.20 123 208 6.5E-22 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Pfam PF00364 Biotin-requiring enzyme 580 645 4.2E-18 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 1.8E-40 T 29-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 SUPERFAMILY SSF52440 4 117 4.32E-44 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Gene3D G3DSA:3.30.470.20 209 450 2.4E-106 T 29-03-2018 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Gene3D G3DSA:3.40.50.20 5 122 2.1E-48 T 29-03-2018 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 SUPERFAMILY SSF51246 335 453 5.76E-40 T 29-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 SUPERFAMILY SSF51230 567 646 4.71E-22 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Gene3D G3DSA:2.40.50.100 576 647 1.8E-20 T 29-03-2018 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 SUPERFAMILY SSF56059 87 351 1.75E-69 T 29-03-2018 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 1.3E-35 T 29-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS00660 61d67666bd31caf30ae99f2d09a1746a 649 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 2.0E-80 T 29-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM474_RS08135 97319d34c8c025d500687e9b9f5f807e 174 Gene3D G3DSA:2.160.10.10 3 172 3.3E-43 T 29-03-2018 AM474_RS08135 97319d34c8c025d500687e9b9f5f807e 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 6.6E-9 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS08135 97319d34c8c025d500687e9b9f5f807e 174 SUPERFAMILY SSF51161 4 167 9.01E-48 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS12430 e92e19d570999aa1d808906765550002 243 SMART SM00062 21 243 0.0014 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS12430 e92e19d570999aa1d808906765550002 243 SUPERFAMILY SSF53850 22 240 1.54E-38 T 29-03-2018 AM474_RS12430 e92e19d570999aa1d808906765550002 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 241 8.6E-22 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS12430 e92e19d570999aa1d808906765550002 243 Gene3D G3DSA:3.40.190.10 21 136 9.1E-15 T 29-03-2018 AM474_RS12430 e92e19d570999aa1d808906765550002 243 Gene3D G3DSA:3.40.190.10 137 243 8.2E-10 T 29-03-2018 AM474_RS06455 938203e31e7f5c34d86c680a7c502c90 89 Pfam PF10976 Protein of unknown function (DUF2790) 10 87 4.1E-26 T 29-03-2018 IPR021245 Protein of unknown function DUF2790 AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 Gene3D G3DSA:1.10.10.10 1 77 8.4E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 Gene3D G3DSA:3.40.190.10 78 174 6.6E-21 T 29-03-2018 AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 SUPERFAMILY SSF46785 1 109 1.03E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 Gene3D G3DSA:3.40.190.10 175 261 1.5E-17 T 29-03-2018 AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 Pfam PF03466 LysR substrate binding domain 85 283 4.6E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS26125 57eba72cadea7ca6c28e6c62a65e99fa 290 SUPERFAMILY SSF53850 86 285 1.29E-40 T 29-03-2018 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 111 3.0E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS26965 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 8.4E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 8.4E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 8.4E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 Gene3D G3DSA:1.10.287.950 203 296 3.5E-4 T 29-03-2018 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 SUPERFAMILY SSF58104 241 521 2.62E-75 T 29-03-2018 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 SUPERFAMILY SSF55785 21 114 3.32E-26 T 29-03-2018 IPR000014 PAS domain AM474_RS26965 d431ce6517217220d3484175e39975a1 521 Gene3D G3DSA:1.10.287.950 297 521 2.1E-53 T 29-03-2018 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 487 6.0E-47 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 SMART SM00283 259 520 1.0E-80 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 Gene3D G3DSA:3.40.50.10600 4 130 4.3E-26 T 29-03-2018 AM474_RS26965 d431ce6517217220d3484175e39975a1 521 Pfam PF08447 PAS fold 31 113 2.0E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS04760 0416abe333d51bb19538a858087128dc 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 433 457 3.7E-39 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS04760 0416abe333d51bb19538a858087128dc 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 3.7E-39 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS04760 0416abe333d51bb19538a858087128dc 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 568 586 3.7E-39 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS04760 0416abe333d51bb19538a858087128dc 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 468 478 3.7E-39 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS04760 0416abe333d51bb19538a858087128dc 657 PRINTS PR00811 Bacterial general secretion pathway protein D signature 591 605 3.7E-39 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS04760 0416abe333d51bb19538a858087128dc 657 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 55 612 6.2E-162 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM474_RS04760 0416abe333d51bb19538a858087128dc 657 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 549 582 - T 29-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 AM474_RS04760 0416abe333d51bb19538a858087128dc 657 Pfam PF00263 Bacterial type II and III secretion system protein 437 603 6.1E-53 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS04760 0416abe333d51bb19538a858087128dc 657 Pfam PF03958 Bacterial type II/III secretion system short domain 281 360 2.1E-16 T 29-03-2018 IPR005644 NolW-like AM474_RS04760 0416abe333d51bb19538a858087128dc 657 Pfam PF03958 Bacterial type II/III secretion system short domain 210 276 2.9E-13 T 29-03-2018 IPR005644 NolW-like AM474_RS04760 0416abe333d51bb19538a858087128dc 657 Pfam PF03958 Bacterial type II/III secretion system short domain 146 205 3.0E-9 T 29-03-2018 IPR005644 NolW-like AM474_RS27055 284a5331e24d34067f9bcb1e656c5035 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 5.2E-47 T 29-03-2018 IPR007437 Putative member of DMT superfamily AM474_RS27055 284a5331e24d34067f9bcb1e656c5035 113 PIRSF PIRSF021239 1 113 2.5E-54 T 29-03-2018 IPR007437 Putative member of DMT superfamily AM474_RS30365 7b3c7be0d6a671b0d27fc8561b077aae 176 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 159 1.6E-16 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 34 513 3.2E-93 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 Gene3D G3DSA:3.30.70.1530 69 132 1.6E-8 T 29-03-2018 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PIRSF PIRSF004862 27 598 5.6E-140 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 Pfam PF08345 Flagellar M-ring protein C-terminal 272 469 3.0E-49 T 29-03-2018 IPR013556 Flagellar M-ring C-terminal AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 140 158 2.2E-41 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 172 186 2.2E-41 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 215 233 2.2E-41 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 285 303 2.2E-41 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 PRINTS PR01009 Flagellar M-ring protein signature 392 416 2.2E-41 T 29-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 AM474_RS24410 326ed212556609999d03b468de9dcfa6 598 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 7.7E-71 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 SUPERFAMILY SSF56042 172 338 3.59E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 336 2.4E-142 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 347 45.693 T 29-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 SUPERFAMILY SSF55326 8 171 2.09E-51 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 3.1E-15 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Gene3D G3DSA:3.90.650.10 172 348 3.1E-62 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 337 6.9E-39 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS23440 1f2f7889bdd1da7611f55a0ebf0ff0c0 353 Gene3D G3DSA:3.30.1330.10 34 162 7.7E-51 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 Gene3D G3DSA:3.40.190.10 204 311 5.9E-11 T 29-03-2018 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 Gene3D G3DSA:3.40.190.10 19 203 4.7E-28 T 29-03-2018 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 Pfam PF13416 Bacterial extracellular solute-binding protein 40 301 1.8E-29 T 29-03-2018 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 SUPERFAMILY SSF53850 24 346 1.18E-82 T 29-03-2018 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 1.6E-46 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13120 5a0bf2ade6ad82c1a3f6b1a0baeea056 347 PIRSF PIRSF019574 5 347 5.7E-109 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS19230 e5536a46bc9d43a295388672cb06e7ce 266 SUPERFAMILY SSF53335 54 249 3.59E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS19230 e5536a46bc9d43a295388672cb06e7ce 266 Pfam PF08241 Methyltransferase domain 63 160 6.6E-15 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS19230 e5536a46bc9d43a295388672cb06e7ce 266 Gene3D G3DSA:3.40.50.150 1 265 6.6E-26 T 29-03-2018 AM474_RS24930 97cb2596577555be58c9df306633b70f 97 Gene3D G3DSA:1.10.10.60 10 91 1.1E-16 T 29-03-2018 AM474_RS24930 97cb2596577555be58c9df306633b70f 97 SUPERFAMILY SSF46689 4 94 7.35E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24930 97cb2596577555be58c9df306633b70f 97 Pfam PF01527 Transposase 3 76 3.3E-15 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 5.6E-59 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 SUPERFAMILY SSF52283 1 133 1.7E-29 T 29-03-2018 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 Gene3D G3DSA:3.40.50.720 112 286 2.8E-55 T 29-03-2018 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 1.2E-28 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 Gene3D G3DSA:3.40.50.720 1 111 1.2E-28 T 29-03-2018 AM474_RS09210 8a047b66bf79afbe686a7e6de6a397f1 325 SUPERFAMILY SSF51735 100 287 8.86E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS13230 bcb7dd3d527a5cb321f805186d890619 293 SUPERFAMILY SSF161098 5 283 5.63E-56 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13230 bcb7dd3d527a5cb321f805186d890619 293 Gene3D G3DSA:1.10.3720.10 6 287 2.3E-42 T 29-03-2018 AM474_RS13230 bcb7dd3d527a5cb321f805186d890619 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 279 5.5E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 200 1.0E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 3.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 3.2E-6 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 Gene3D G3DSA:3.40.50.1000 87 232 4.5E-30 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 195 6.7E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 SUPERFAMILY SSF56784 5 229 1.65E-46 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 Gene3D G3DSA:3.40.50.1000 1 43 0.18 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16410 33c76e2bd7623fc78f0f77fdeb7cbbf1 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 200 1.4E-19 T 29-03-2018 IPR023214 HAD-like domain AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.5E-20 T 29-03-2018 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.5E-20 T 29-03-2018 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.5E-20 T 29-03-2018 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 1.5E-20 T 29-03-2018 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.5E-20 T 29-03-2018 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 Gene3D G3DSA:3.50.50.60 4 356 3.3E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 Pfam PF01494 FAD binding domain 6 348 3.4E-34 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 SUPERFAMILY SSF51905 271 364 4.21E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10825 3c5342b647d911959275b5a8123421ea 401 SUPERFAMILY SSF51905 6 174 4.21E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25995 19c448ca179a669e4b7b67db39b3d523 177 SUPERFAMILY SSF55729 1 169 1.6E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS25995 19c448ca179a669e4b7b67db39b3d523 177 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 1.6E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS25995 19c448ca179a669e4b7b67db39b3d523 177 Gene3D G3DSA:3.40.630.30 1 173 2.2E-40 T 29-03-2018 AM474_RS24470 2b282482eb5d1a0f0e7bb8c022081773 73 Pfam PF09905 DNA-binding protein VF530 6 66 6.4E-34 T 29-03-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 AM474_RS24470 2b282482eb5d1a0f0e7bb8c022081773 73 Gene3D G3DSA:1.10.720.30 12 68 4.2E-31 T 29-03-2018 IPR003034 SAP domain AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 Gene3D G3DSA:3.30.1330.60 78 235 1.0E-43 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF13488 Glycine zipper 48 90 3.3E-8 T 29-03-2018 AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 SUPERFAMILY SSF103088 108 223 6.67E-40 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 166 182 8.5E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 121 143 8.5E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 PRINTS PR01021 OMPA domain signature 151 166 8.5E-13 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS22825 a2f08a9ab69a8b648ca91800100b106b 237 Pfam PF00691 OmpA family 120 215 1.5E-23 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS30025 103b15b34d839a73aad16f4b1f599ed7 79 Pfam PF02069 Prokaryotic metallothionein 5 49 3.3E-13 T 29-03-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 AM474_RS30025 103b15b34d839a73aad16f4b1f599ed7 79 SUPERFAMILY SSF57868 5 50 6.83E-12 T 29-03-2018 IPR017854 Metallothionein domain GO:0046872 AM474_RS30025 103b15b34d839a73aad16f4b1f599ed7 79 ProDom PD019076 METALLOTHIONEIN METALLOTHIONEIN ZINC METAL-BINDING CADMIUM CLUSTER MT METAL-THIOLATE COPPER SMTA 6 49 2.0E-17 T 29-03-2018 IPR000518 Metallothionein, family 14, prokaryote GO:0046872 AM474_RS30025 103b15b34d839a73aad16f4b1f599ed7 79 Gene3D G3DSA:2.30.170.10 2 49 8.3E-16 T 29-03-2018 AM474_RS16600 da240b3e0c5d9583556f997737eb00e3 222 SUPERFAMILY SSF52317 3 217 1.36E-66 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS16600 da240b3e0c5d9583556f997737eb00e3 222 Gene3D G3DSA:3.40.50.880 1 222 2.7E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS16600 da240b3e0c5d9583556f997737eb00e3 222 Pfam PF01965 DJ-1/PfpI family 16 190 2.5E-9 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS16600 da240b3e0c5d9583556f997737eb00e3 222 PIRSF PIRSF006320 2 217 1.8E-108 T 29-03-2018 IPR026041 Glyoxalase ElbB AM474_RS04025 4883180ec932cd69996ef994017c587d 414 Gene3D G3DSA:3.40.47.10 6 260 5.0E-81 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04025 4883180ec932cd69996ef994017c587d 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM474_RS04025 4883180ec932cd69996ef994017c587d 414 SMART SM00825 Beta-ketoacyl synthase 6 414 3.2E-16 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM474_RS04025 4883180ec932cd69996ef994017c587d 414 Gene3D G3DSA:3.40.47.10 263 414 5.9E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04025 4883180ec932cd69996ef994017c587d 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.1E-60 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM474_RS04025 4883180ec932cd69996ef994017c587d 414 PIRSF PIRSF000447 1 414 6.5E-192 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM474_RS04025 4883180ec932cd69996ef994017c587d 414 SUPERFAMILY SSF53901 215 412 1.5E-75 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04025 4883180ec932cd69996ef994017c587d 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.1E-41 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM474_RS04025 4883180ec932cd69996ef994017c587d 414 SUPERFAMILY SSF53901 4 252 5.32E-78 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04025 4883180ec932cd69996ef994017c587d 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.5E-198 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 SUPERFAMILY SSF100879 242 348 1.35E-22 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 SUPERFAMILY SSF56672 2 234 1.42E-93 T 29-03-2018 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Pfam PF11798 IMS family HHH motif 169 197 8.7E-6 T 29-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Gene3D G3DSA:3.30.70.270 41 112 4.2E-27 T 29-03-2018 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Gene3D G3DSA:3.30.70.270 113 170 5.9E-21 T 29-03-2018 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 37.867 T 29-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Gene3D G3DSA:1.10.150.20 171 242 1.2E-23 T 29-03-2018 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Gene3D G3DSA:3.30.1490.100 243 349 1.9E-17 T 29-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM474_RS23325 c92f4b1a3d3042a9dafbc74175013fea 349 Pfam PF00817 impB/mucB/samB family 7 154 1.4E-52 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 Pfam PF14489 QueF-like protein 190 262 7.1E-24 T 29-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 SUPERFAMILY SSF55620 132 259 1.7E-10 T 29-03-2018 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 Gene3D G3DSA:3.30.1130.10 139 276 6.3E-43 T 29-03-2018 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 TIGRFAM TIGR03138 QueF: queuine synthase 5 276 5.2E-123 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 Gene3D G3DSA:3.30.1130.10 16 131 1.2E-37 T 29-03-2018 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 PIRSF PIRSF004750 1 276 1.2E-118 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 149.691 T 29-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM474_RS02645 a46ff51ddc0e0161f32e968df870ad5a 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 126 3.1E-46 T 29-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 5.9E-159 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 PIRSF PIRSF000774 1 497 5.6E-157 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 Pfam PF04552 Sigma-54, DNA binding domain 337 495 5.1E-72 T 29-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 Gene3D G3DSA:1.10.10.10 342 433 1.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 Pfam PF04963 Sigma-54 factor, core binding domain 130 323 7.4E-63 T 29-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 PRINTS PR00045 Sigma-54 factor signature 412 423 1.4E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 PRINTS PR00045 Sigma-54 factor signature 396 408 1.4E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 PRINTS PR00045 Sigma-54 factor signature 470 488 1.4E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 PRINTS PR00045 Sigma-54 factor signature 206 223 1.4E-32 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS21075 ee48a41ad7d6be6e0537520fa366585b 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 8.3E-17 T 29-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 AM474_RS27590 15f016a84706a87f90eb0783d3d83d02 185 Pfam PF01713 Smr domain 95 176 2.3E-21 T 29-03-2018 IPR002625 Smr domain AM474_RS27590 15f016a84706a87f90eb0783d3d83d02 185 SUPERFAMILY SSF160443 94 176 1.7E-15 T 29-03-2018 IPR002625 Smr domain AM474_RS27590 15f016a84706a87f90eb0783d3d83d02 185 SMART SM00463 92 176 1.0E-8 T 29-03-2018 IPR002625 Smr domain AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 SUPERFAMILY SSF52025 117 239 3.79E-15 T 29-03-2018 AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 Pfam PF04389 Peptidase family M28 277 489 9.3E-46 T 29-03-2018 IPR007484 Peptidase M28 AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 Gene3D G3DSA:3.40.630.10 60 503 1.1E-56 T 29-03-2018 AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 Pfam PF02225 PA domain 155 253 3.8E-17 T 29-03-2018 IPR003137 PA domain AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 SUPERFAMILY SSF53187 261 495 1.0E-62 T 29-03-2018 AM474_RS03890 fb2fe05223b82235c6eaaa5856894ab0 536 SUPERFAMILY SSF53187 70 111 1.0E-62 T 29-03-2018 AM474_RS31565 53552d26abbfb83ddcef0b8b7874180c 427 SUPERFAMILY SSF53383 40 423 4.4E-67 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31565 53552d26abbfb83ddcef0b8b7874180c 427 Gene3D G3DSA:3.40.640.10 68 331 5.2E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS31565 53552d26abbfb83ddcef0b8b7874180c 427 Gene3D G3DSA:3.90.1150.10 332 426 7.6E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS31565 53552d26abbfb83ddcef0b8b7874180c 427 Pfam PF00266 Aminotransferase class-V 65 387 3.6E-30 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS31565 53552d26abbfb83ddcef0b8b7874180c 427 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 255 275 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM474_RS21630 7f75af223a6b8a1bc80ba226f649bd22 388 Gene3D G3DSA:1.20.1250.20 3 186 1.7E-31 T 29-03-2018 AM474_RS21630 7f75af223a6b8a1bc80ba226f649bd22 388 SUPERFAMILY SSF103473 5 375 4.71E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS21630 7f75af223a6b8a1bc80ba226f649bd22 388 Pfam PF07690 Major Facilitator Superfamily 8 341 1.7E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS21630 7f75af223a6b8a1bc80ba226f649bd22 388 Gene3D G3DSA:1.20.1250.20 187 376 1.7E-15 T 29-03-2018 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 1.2E-51 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Gene3D G3DSA:2.40.110.10 120 220 2.7E-35 T 29-03-2018 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 PIRSF PIRSF016578 129 195 0.05 T 29-03-2018 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 PIRSF PIRSF016578 3 88 2.7 T 29-03-2018 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 PIRSF PIRSF016578 235 383 8.8E-13 T 29-03-2018 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 SUPERFAMILY SSF47203 230 382 2.9E-55 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.3E-18 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 SUPERFAMILY SSF56645 1 243 5.5E-69 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Gene3D G3DSA:1.10.540.10 1 119 2.0E-23 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 220 2.4E-25 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS18280 2ce1712667461dc6be2e6c278de58608 386 Gene3D G3DSA:1.20.140.10 221 384 2.8E-63 T 29-03-2018 AM474_RS27320 f11524b4cbc5f06f1a2720fa2ca1f07e 261 SUPERFAMILY SSF52096 7 260 1.38E-88 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS27320 f11524b4cbc5f06f1a2720fa2ca1f07e 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 260 7.5E-73 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS27320 f11524b4cbc5f06f1a2720fa2ca1f07e 261 Gene3D G3DSA:1.10.12.10 222 259 9.4E-21 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS27320 f11524b4cbc5f06f1a2720fa2ca1f07e 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS27320 f11524b4cbc5f06f1a2720fa2ca1f07e 261 Gene3D G3DSA:3.90.226.10 7 221 5.9E-70 T 29-03-2018 AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.40.50.720 2 199 1.0E-23 T 29-03-2018 AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 312 2.5E-122 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.90.25.10 245 323 4.3E-24 T 29-03-2018 AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 Gene3D G3DSA:3.90.25.10 200 244 4.0E-24 T 29-03-2018 AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 322 53.111 T 29-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 SUPERFAMILY SSF51735 3 319 9.68E-75 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15490 85d010fb479e34b496b58f4759483e47 323 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 319 2.3E-127 T 29-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 AM474_RS02020 51e6cc16fb8a0106e70b7b6e783d5498 425 Pfam PF03573 outer membrane porin, OprD family 28 423 3.5E-141 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS02020 51e6cc16fb8a0106e70b7b6e783d5498 425 Gene3D G3DSA:2.40.160.10 1 425 1.6E-115 T 29-03-2018 AM474_RS11530 535659a34bbbf2081c85b18330d4b2d5 177 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 141 5.1E-42 T 29-03-2018 IPR006521 Tail protein I AM474_RS11530 535659a34bbbf2081c85b18330d4b2d5 177 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 142 8.1E-48 T 29-03-2018 IPR006521 Tail protein I AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.4E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.4E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.4E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.4E-37 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 SUPERFAMILY SSF52943 2 286 1.83E-95 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 29-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 Pfam PF00231 ATP synthase 5 285 3.4E-96 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.72 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:3.40.1380.10 42 235 1.1E-72 T 29-03-2018 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 2 41 1.7E-15 T 29-03-2018 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 Gene3D G3DSA:1.10.287.80 236 281 7.1E-16 T 29-03-2018 AM474_RS14965 54d82bce207089d40a4917f143e29be5 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.1E-106 T 29-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS14160 b6ecb856ebd66e21aeb81e4ddd716a2d 75 Gene3D G3DSA:1.10.1220.10 1 43 2.4E-10 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS14160 b6ecb856ebd66e21aeb81e4ddd716a2d 75 SUPERFAMILY SSF48092 16 72 3.53E-12 T 29-03-2018 IPR013799 STAT transcription factor, protein interaction GO:0006355|GO:0007165 AM474_RS14160 b6ecb856ebd66e21aeb81e4ddd716a2d 75 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 4.3E-11 T 29-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 Gene3D G3DSA:3.40.50.620 1 158 1.8E-38 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 SUPERFAMILY SSF52374 1 156 4.29E-47 T 29-03-2018 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.6E-50 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.6E-50 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.6E-50 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.6E-50 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.6E-50 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 4.2E-20 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 Pfam PF01467 Cytidylyltransferase-like 5 133 7.9E-24 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.504 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 94 1.0E-5 T 29-03-2018 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 1.0E-59 T 29-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM474_RS12900 78e6ca3073c342d1ff05d89bf42d4dc8 159 SMART SM00764 12 153 0.0096 T 29-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 AM474_RS09100 817e64ddb84b15b05c47973da6f44a68 431 Gene3D G3DSA:1.20.1250.20 202 418 4.4E-26 T 29-03-2018 AM474_RS09100 817e64ddb84b15b05c47973da6f44a68 431 SUPERFAMILY SSF103473 5 412 2.22E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS09100 817e64ddb84b15b05c47973da6f44a68 431 Pfam PF07690 Major Facilitator Superfamily 17 368 3.8E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS09100 817e64ddb84b15b05c47973da6f44a68 431 Gene3D G3DSA:1.20.1250.20 1 200 1.2E-27 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Pfam PF14561 Tetratricopeptide repeat 200 289 4.4E-27 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 110 1.7E-30 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Pfam PF14559 Tetratricopeptide repeat 129 195 8.4E-12 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 PRINTS PR00421 Thioredoxin family signature 36 45 1.5E-7 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 PRINTS PR00421 Thioredoxin family signature 28 36 1.5E-7 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 PRINTS PR00421 Thioredoxin family signature 76 87 1.5E-7 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 SUPERFAMILY SSF48452 225 247 1.39E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 SUPERFAMILY SSF48452 125 190 1.39E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Gene3D G3DSA:1.25.40.10 207 289 0.0014 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 SUPERFAMILY SSF52833 5 113 7.72E-37 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Gene3D G3DSA:3.40.30.10 4 126 1.9E-32 T 29-03-2018 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Pfam PF00085 Thioredoxin 9 109 1.8E-27 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM474_RS10175 02d98eb0d559597d55eb0ada983765b4 289 Gene3D G3DSA:1.25.40.10 127 201 2.8E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 71 8.1E-5 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 SMART SM00829 10 317 2.3E-13 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 Gene3D G3DSA:3.90.180.10 1 142 9.4E-39 T 29-03-2018 AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 SUPERFAMILY SSF51735 113 286 2.07E-27 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 SUPERFAMILY SSF50129 1 134 3.8E-33 T 29-03-2018 IPR011032 GroES-like AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 Gene3D G3DSA:3.40.50.720 143 261 6.4E-18 T 29-03-2018 AM474_RS22980 3adf9e2089bcd8e3e156f909092385c7 319 Pfam PF00107 Zinc-binding dehydrogenase 151 261 1.0E-13 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 149 2.4E-19 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 2.8E-12 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 2.8E-12 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 PRINTS PR00885 Bacterial general secretion pathway protein H signature 128 143 2.8E-12 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 Gene3D G3DSA:3.55.40.10 34 169 8.4E-33 T 29-03-2018 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 7.5E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 Pfam PF12019 Type II transport protein GspH 42 161 3.9E-10 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 SUPERFAMILY SSF54523 7 89 4.55E-13 T 29-03-2018 AM474_RS04735 efda637d88bd04e6a7834cec4f605885 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 249 420 6.28E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 9 199 6.28E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 SUPERFAMILY SSF103473 455 485 6.28E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Gene3D G3DSA:1.20.1250.20 253 492 4.8E-24 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Pfam PF07690 Major Facilitator Superfamily 18 410 3.8E-55 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 419 2.1E-75 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 Gene3D G3DSA:1.20.1250.20 1 198 5.3E-37 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 1.4E-12 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.4E-12 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 1.4E-12 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 1.4E-12 T 29-03-2018 AM474_RS13555 e4c3d84a4a2779b299e6e7ab87e5a2a8 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.4E-12 T 29-03-2018 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Pfam PF00694 Aconitase C-terminal domain 661 792 3.7E-30 T 29-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Gene3D G3DSA:3.30.499.10 2 227 1.6E-60 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 SUPERFAMILY SSF53732 23 591 2.22E-184 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 SUPERFAMILY SSF52016 603 862 7.85E-68 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Gene3D G3DSA:3.30.499.10 359 552 4.4E-55 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 469 482 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 281 294 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 205 220 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 267 280 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 191 204 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 162 170 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 407 418 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 138 151 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 PRINTS PR00415 Aconitase family signature 360 374 1.4E-28 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Gene3D G3DSA:3.20.19.10 624 864 7.5E-68 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Gene3D G3DSA:3.40.1060.10 228 358 1.9E-41 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 5.0E-149 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS22625 de92b8352764079aa52b115cd2119271 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 29-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 106 731 44.442 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 SUPERFAMILY SSF81296 143 200 5.6E-10 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Gene3D G3DSA:3.20.20.80 250 640 2.9E-77 T 29-03-2018 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Pfam PF00128 Alpha amylase, catalytic domain 280 351 6.6E-9 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Gene3D G3DSA:2.60.40.1180 641 731 3.0E-29 T 29-03-2018 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 SMART SM00642 256 624 7.6E-7 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 114 729 3.6E-273 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 633 729 4.0E-20 T 29-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 SUPERFAMILY SSF51011 630 730 2.64E-28 T 29-03-2018 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 PIRSF PIRSF000463 12 732 4.4E-280 T 29-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 SUPERFAMILY SSF81296 21 119 2.08E-15 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Gene3D G3DSA:2.60.40.10 6 108 1.3E-9 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 SUPERFAMILY SSF51445 185 621 2.64E-116 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 130 212 2.2E-22 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM474_RS30100 2aa8429baa602379040072292b6dbc23 732 Gene3D G3DSA:2.60.40.10 121 249 7.6E-31 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30270 43fbf44739a73b2a0ea735405856b06f 184 Gene3D G3DSA:3.90.226.10 1 171 2.9E-17 T 29-03-2018 AM474_RS30270 43fbf44739a73b2a0ea735405856b06f 184 SUPERFAMILY SSF52096 3 170 1.74E-29 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS30270 43fbf44739a73b2a0ea735405856b06f 184 Pfam PF00574 Clp protease 2 168 7.9E-15 T 29-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 Gene3D G3DSA:3.20.20.80 35 513 4.8E-135 T 29-03-2018 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 Pfam PF00232 Glycosyl hydrolase family 1 46 496 5.0E-120 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 47 61 - T 29-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 399 407 - T 29-03-2018 IPR018120 Glycoside hydrolase family 1, active site AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 460 2.0E-18 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 433 2.0E-18 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 467 479 2.0E-18 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 338 352 2.0E-18 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 407 2.0E-18 T 29-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AM474_RS18545 2c7c2454968731b34543a0b59c597887 513 SUPERFAMILY SSF51445 45 499 7.25E-126 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 Gene3D G3DSA:3.40.50.920 638 792 5.0E-17 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 434 604 2.6E-42 T 29-03-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 Pfam PF09364 XFP N-terminal domain 66 307 9.1E-14 T 29-03-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 PIRSF PIRSF017245 26 801 1.3E-226 T 29-03-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 SUPERFAMILY SSF52518 81 387 1.14E-20 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 Gene3D G3DSA:3.40.50.970 422 630 1.8E-25 T 29-03-2018 AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 SUPERFAMILY SSF52518 422 620 3.83E-7 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS07420 8c61482efe9b57489f1e1300f973487d 801 Gene3D G3DSA:3.40.50.970 79 407 9.3E-23 T 29-03-2018 AM474_RS16240 c3988557fcbad409a3b4d72cd3f2748d 120 Gene3D G3DSA:2.60.120.10 3 116 3.7E-16 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS16240 c3988557fcbad409a3b4d72cd3f2748d 120 Pfam PF05899 Protein of unknown function (DUF861) 41 113 3.1E-23 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS16240 c3988557fcbad409a3b4d72cd3f2748d 120 SUPERFAMILY SSF51182 16 116 1.11E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Gene3D G3DSA:3.30.70.270 341 514 7.2E-57 T 29-03-2018 AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Pfam PF03707 Bacterial signalling protein N terminal repeat 191 243 9.1E-15 T 29-03-2018 IPR005330 MHYT domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Pfam PF03707 Bacterial signalling protein N terminal repeat 128 184 2.2E-16 T 29-03-2018 IPR005330 MHYT domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Pfam PF03707 Bacterial signalling protein N terminal repeat 261 322 1.2E-6 T 29-03-2018 IPR005330 MHYT domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 503 1.6E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Gene3D G3DSA:3.20.20.450 515 776 4.8E-100 T 29-03-2018 IPR001633 EAL domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 Pfam PF00563 EAL domain 523 758 1.3E-75 T 29-03-2018 IPR001633 EAL domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 SMART SM00052 517 763 6.5E-110 T 29-03-2018 IPR001633 EAL domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 SUPERFAMILY SSF55073 352 508 5.1E-47 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 SMART SM00267 336 507 1.0E-55 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 505 1.6E-45 T 29-03-2018 IPR000160 GGDEF domain AM474_RS05885 dab4c79964897a7f92e47f370a661fdd 785 SUPERFAMILY SSF141868 522 771 2.75E-88 T 29-03-2018 IPR001633 EAL domain AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 PIRSF PIRSF006809 5 422 1.6E-149 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF54980 370 420 4.24E-8 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Hamap MF_00900 GTPase HflX [hflX]. 28 391 47.028 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 2.6E-31 T 29-03-2018 IPR025121 GTPase HflX, N-terminal AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 4.2E-155 T 29-03-2018 IPR016496 GTPase HflX GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF01926 50S ribosome-binding GTPase 201 319 2.7E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 3.2E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 3.2E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 3.2E-10 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Gene3D G3DSA:3.40.50.300 168 232 1.1E-12 T 29-03-2018 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Gene3D G3DSA:3.40.50.300 233 379 1.8E-17 T 29-03-2018 AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.3E-29 T 29-03-2018 IPR032305 GTP-binding protein, middle domain AM474_RS18465 430dedb91f9794190d9d233a6d743ce1 433 SUPERFAMILY SSF52540 199 374 4.94E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 SUPERFAMILY SSF53335 21 244 1.32E-33 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 Pfam PF13649 Methyltransferase domain 62 162 8.7E-12 T 29-03-2018 AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 Gene3D G3DSA:3.40.50.150 18 245 4.4E-32 T 29-03-2018 AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 246 40.533 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 245 7.9E-87 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM474_RS22520 edbbaadb69348ba10d5447d010391487 246 PIRSF PIRSF006325 1 246 8.0E-115 T 29-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Gene3D G3DSA:1.10.10.60 283 339 3.5E-13 T 29-03-2018 AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 SMART SM00342 245 327 9.2E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 43 198 2.2E-15 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 SUPERFAMILY SSF46689 280 329 1.76E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Pfam PF12833 Helix-turn-helix domain 251 328 2.6E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00775 3e9e617fbf1733cf55e1d1d208f1e6c4 342 Gene3D G3DSA:1.10.10.10 228 268 4.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 143 3.0E-69 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 75.469 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 SUPERFAMILY SSF52304 3 145 2.75E-63 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 Pfam PF01220 Dehydroquinase class II 4 140 1.6E-60 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 Gene3D G3DSA:3.40.50.9100 1 147 3.4E-67 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 PIRSF PIRSF001399 1 146 1.4E-58 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 8.4E-62 T 29-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS18980 fc0d747fc3254ba82f4319ee979026f0 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 29-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AM474_RS14205 4b79ab3d80676d657ac3d0dface0d38f 157 Pfam PF01638 HxlR-like helix-turn-helix 19 104 8.7E-23 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AM474_RS14205 4b79ab3d80676d657ac3d0dface0d38f 157 Gene3D G3DSA:1.10.10.10 1 147 6.0E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14205 4b79ab3d80676d657ac3d0dface0d38f 157 SUPERFAMILY SSF46785 6 144 3.08E-43 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23080 fecb2ee34adbe8e58ac5da8ad17d51d5 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.3E-7 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS23080 fecb2ee34adbe8e58ac5da8ad17d51d5 126 SUPERFAMILY SSF54593 1 124 4.13E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS23080 fecb2ee34adbe8e58ac5da8ad17d51d5 126 Gene3D G3DSA:3.10.180.10 7 126 2.5E-27 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS05855 9e214ea76641e2b92c343055984ae342 200 Gene3D G3DSA:2.60.120.590 8 200 5.5E-51 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM474_RS05855 9e214ea76641e2b92c343055984ae342 200 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 16 194 3.0E-34 T 29-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like AM474_RS05855 9e214ea76641e2b92c343055984ae342 200 SUPERFAMILY SSF51197 8 198 2.47E-63 T 29-03-2018 AM474_RS09920 7111f301e8926a246d9adb37e30a088a 239 Gene3D G3DSA:3.10.300.10 13 216 7.6E-42 T 29-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM474_RS09920 7111f301e8926a246d9adb37e30a088a 239 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 19 213 25.841 T 29-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM474_RS09920 7111f301e8926a246d9adb37e30a088a 239 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 21 205 8.6E-36 T 29-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM474_RS09920 7111f301e8926a246d9adb37e30a088a 239 SUPERFAMILY SSF50486 15 220 3.45E-53 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM474_RS30895 e2401562224252769a3bbb8325517f21 500 PIRSF PIRSF000331 7 492 3.0E-182 T 29-03-2018 IPR004925 HpaB/PvcC/4-BUDH AM474_RS30895 e2401562224252769a3bbb8325517f21 500 PIRSF PIRSF500125 1 500 2.9E-234 T 29-03-2018 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein AM474_RS30895 e2401562224252769a3bbb8325517f21 500 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 11 273 1.2E-88 T 29-03-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal AM474_RS30895 e2401562224252769a3bbb8325517f21 500 Gene3D G3DSA:2.40.110.10 145 275 7.7E-13 T 29-03-2018 AM474_RS30895 e2401562224252769a3bbb8325517f21 500 SUPERFAMILY SSF56645 9 274 7.33E-74 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS30895 e2401562224252769a3bbb8325517f21 500 SUPERFAMILY SSF47203 265 484 2.09E-50 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS30895 e2401562224252769a3bbb8325517f21 500 Gene3D G3DSA:1.10.3140.10 9 144 5.0E-43 T 29-03-2018 AM474_RS30895 e2401562224252769a3bbb8325517f21 500 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 281 480 1.1E-54 T 29-03-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal AM474_RS30895 e2401562224252769a3bbb8325517f21 500 Gene3D G3DSA:1.20.140.10 288 484 3.1E-55 T 29-03-2018 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 233 2.7E-13 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 5.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 227 5.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 5.5E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 SUPERFAMILY SSF63380 7 104 2.15E-21 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 SUPERFAMILY SSF52343 109 258 2.1E-34 T 29-03-2018 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 Gene3D G3DSA:2.40.30.10 1 101 8.5E-17 T 29-03-2018 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 Gene3D G3DSA:3.40.50.80 103 258 5.6E-27 T 29-03-2018 AM474_RS20255 df636b0421bb2a9899997b254a3419c1 258 Pfam PF00970 Oxidoreductase FAD-binding domain 23 94 1.2E-5 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS07685 416fab04c4446c0950095486b260332c 207 PIRSF PIRSF006324 1 205 2.2E-49 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS07685 416fab04c4446c0950095486b260332c 207 Pfam PF01810 LysE type translocator 14 203 4.1E-26 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS22775 e0f9099b00ebdae8f92522fc79c8ca9d 172 Pfam PF05488 PAAR motif 2 54 1.7E-16 T 29-03-2018 IPR008727 PAAR motif AM474_RS22775 e0f9099b00ebdae8f92522fc79c8ca9d 172 Gene3D G3DSA:2.60.130.10 55 168 2.3E-4 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 SUPERFAMILY SSF56935 22 708 4.07E-140 T 29-03-2018 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 707 1.3E-114 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 Gene3D G3DSA:2.170.130.10 21 175 9.8E-26 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 Pfam PF00593 TonB dependent receptor 236 706 2.8E-72 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 Gene3D G3DSA:2.40.170.20 176 708 4.9E-89 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS19030 1054f1fa8ca500a8f2ee9578798e3f72 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 163 3.3E-16 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.389 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 Gene3D G3DSA:1.20.5.1150 16 52 1.2E-18 T 29-03-2018 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 Pfam PF01165 Ribosomal protein S21 4 56 2.0E-22 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 5.0E-7 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.6E-25 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 29-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11730 464f0a183fbd7290eff9f75ab1766079 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-16 T 29-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 18 149 2.2E-32 T 29-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 SUPERFAMILY SSF54862 28 151 5.16E-18 T 29-03-2018 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Pfam PF12838 4Fe-4S dicluster domain 101 148 4.8E-9 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Gene3D G3DSA:3.30.70.20 93 135 5.3E-8 T 29-03-2018 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Gene3D G3DSA:1.10.1060.10 2 38 4.3E-5 T 29-03-2018 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Pfam PF13187 4Fe-4S dicluster domain 31 76 4.1E-7 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 31 42 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Gene3D G3DSA:3.30.70.20 39 80 2.9E-9 T 29-03-2018 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 Gene3D G3DSA:1.10.1060.10 136 162 2.6E-5 T 29-03-2018 AM474_RS24820 5f1e42b51786738c502d7e5bf283cb78 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 134 145 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS19640 52760736477f81978779a114400b69cd 293 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 289 44.177 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM474_RS19640 52760736477f81978779a114400b69cd 293 SUPERFAMILY SSF52374 5 284 4.56E-88 T 29-03-2018 AM474_RS19640 52760736477f81978779a114400b69cd 293 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 269 2.8E-110 T 29-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 AM474_RS19640 52760736477f81978779a114400b69cd 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 6.5E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 6.5E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 6.5E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 6.5E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 6.5E-13 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 123 230 3.3E-16 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 108 7.4E-30 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM474_RS19640 52760736477f81978779a114400b69cd 293 Gene3D G3DSA:3.40.50.620 110 221 3.4E-29 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS19640 52760736477f81978779a114400b69cd 293 Gene3D G3DSA:3.40.50.620 5 109 3.6E-32 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 267 8.6E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 Gene3D G3DSA:2.40.170.20 274 884 1.5E-66 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 SMART SM00965 65 116 1.0E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 Pfam PF00593 TonB dependent receptor 365 877 5.1E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 Gene3D G3DSA:2.170.130.10 125 273 1.3E-28 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 SUPERFAMILY SSF56935 623 884 1.47E-98 T 29-03-2018 AM474_RS00785 b212e93cecb841572a223bfbce63c2fe 884 SUPERFAMILY SSF56935 126 596 1.47E-98 T 29-03-2018 AM474_RS29860 9e23bd62f2bdde2b735796b5cc5c71a0 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 247 43.249 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS29860 9e23bd62f2bdde2b735796b5cc5c71a0 247 Gene3D G3DSA:3.20.20.370 3 247 5.4E-100 T 29-03-2018 AM474_RS29860 9e23bd62f2bdde2b735796b5cc5c71a0 247 SUPERFAMILY SSF88713 6 246 1.33E-93 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS29860 9e23bd62f2bdde2b735796b5cc5c71a0 247 Pfam PF03746 LamB/YcsF family 6 245 1.1E-95 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 42.096 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:1.10.8.60 335 435 9.0E-24 T 29-03-2018 AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 Gene3D G3DSA:3.40.50.300 1 332 2.1E-50 T 29-03-2018 AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 SMART SM00382 48 332 2.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 SUPERFAMILY SSF52540 3 445 2.83E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 137 2.1E-7 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 SMART SM01086 335 433 3.6E-15 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 8.1E-40 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS17610 a16ca15dcd72cff649a2985e172610e0 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 447 3.5E-210 T 29-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM474_RS23840 89bf9190cc523f48e3ce8f3728b10e80 301 Pfam PF00753 Metallo-beta-lactamase superfamily 18 221 2.0E-26 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23840 89bf9190cc523f48e3ce8f3728b10e80 301 SUPERFAMILY SSF56281 14 269 7.6E-53 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23840 89bf9190cc523f48e3ce8f3728b10e80 301 Gene3D G3DSA:3.60.15.10 3 274 5.2E-35 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23840 89bf9190cc523f48e3ce8f3728b10e80 301 SMART SM00849 21 221 2.0E-26 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 SUPERFAMILY SSF53448 6 230 1.91E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Gene3D G3DSA:3.40.50.2000 989 1144 1.2E-8 T 29-03-2018 AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Pfam PF13641 Glycosyltransferase like family 2 563 794 3.5E-17 T 29-03-2018 AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Gene3D G3DSA:3.90.550.10 538 869 1.5E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Pfam PF00535 Glycosyl transferase family 2 8 123 1.4E-20 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 SUPERFAMILY SSF53448 336 498 3.66E-10 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 SUPERFAMILY SSF53448 565 782 4.22E-35 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Gene3D G3DSA:3.90.550.10 297 502 6.6E-5 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 Gene3D G3DSA:3.90.550.10 1 273 3.8E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24355 8bc2b51485dd421f580cd5edfa8e6583 1168 SUPERFAMILY SSF53756 883 1149 3.85E-8 T 29-03-2018 AM474_RS06395 e0c51c17e121531374c9688767b63042 197 Pfam PF14216 Domain of unknown function (DUF4326) 108 187 1.7E-21 T 29-03-2018 IPR025475 Protein of unknown function DUF4326) AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 Gene3D G3DSA:3.40.640.10 83 336 9.2E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 Pfam PF00202 Aminotransferase class-III 39 452 7.3E-84 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 PIRSF PIRSF000521 19 458 4.7E-25 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 SUPERFAMILY SSF53383 20 457 1.32E-113 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 Gene3D G3DSA:3.90.1150.10 337 466 3.4E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19200 fdce2ecd025f1628206b67e4668dee74 468 Gene3D G3DSA:3.90.1150.10 8 82 9.0E-4 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 SUPERFAMILY SSF74982 5 136 1.22E-50 T 29-03-2018 IPR023620 Small protein B AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 Gene3D G3DSA:2.40.280.10 12 131 2.2E-46 T 29-03-2018 IPR023620 Small protein B AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 154 2.0E-52 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 4.0E-68 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 Pfam PF01668 SmpB protein 12 154 1.9E-58 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 71.799 T 29-03-2018 IPR000037 SsrA-binding protein GO:0003723 AM474_RS19390 b565538431fb1b23d020d29b8090d5c0 159 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 29-03-2018 IPR020081 SsrA-binding protein, conserved site AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF03466 LysR substrate binding domain 101 302 2.6E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:3.40.190.10 94 216 8.9E-14 T 29-03-2018 AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF53850 97 302 4.71E-24 T 29-03-2018 AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 SUPERFAMILY SSF46785 16 101 3.44E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 3.8E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14120 88ef7ef97b92cde4e92600ec88258018 305 Gene3D G3DSA:1.10.10.10 11 93 7.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16595 c48ecc37354117a68846d65179bb579b 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 155 8.4E-17 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS16595 c48ecc37354117a68846d65179bb579b 157 Gene3D G3DSA:3.10.129.10 10 156 9.5E-30 T 29-03-2018 AM474_RS16595 c48ecc37354117a68846d65179bb579b 157 SUPERFAMILY SSF54637 7 155 4.98E-29 T 29-03-2018 IPR029069 HotDog domain AM474_RS16595 c48ecc37354117a68846d65179bb579b 157 Pfam PF03061 Thioesterase superfamily 58 148 1.8E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 Gene3D G3DSA:3.40.190.10 208 334 1.0E-21 T 29-03-2018 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PIRSF PIRSF019574 1 365 3.0E-143 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 4.0E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 Gene3D G3DSA:3.40.190.10 22 207 7.3E-35 T 29-03-2018 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 SUPERFAMILY SSF53850 27 364 3.83E-103 T 29-03-2018 AM474_RS13240 5391c0ddf46cb86674335997bb110489 365 Pfam PF13416 Bacterial extracellular solute-binding protein 43 326 1.8E-35 T 29-03-2018 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Pfam PF00271 Helicase conserved C-terminal domain 294 410 1.5E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Gene3D G3DSA:3.40.50.300 71 229 1.2E-28 T 29-03-2018 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 SUPERFAMILY SSF52540 74 591 2.01E-104 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Gene3D G3DSA:3.40.50.300 248 430 1.9E-44 T 29-03-2018 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 SMART SM00490 311 411 1.6E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 SMART SM00847 471 561 3.8E-37 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Pfam PF11898 Domain of unknown function (DUF3418) 736 1323 2.8E-201 T 29-03-2018 IPR024590 RNA helicase HrpA, C-terminal AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 SMART SM00382 87 391 9.2E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1323 0.0 T 29-03-2018 IPR010222 RNA helicase HrpA GO:0004004 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 SMART SM00487 69 254 3.7E-24 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 647 723 7.5E-22 T 29-03-2018 IPR011709 Domain of unknown function DUF1605 AM474_RS05800 f410c35be4559ee65e491ced3759ecf3 1326 Pfam PF04408 Helicase associated domain (HA2) 474 558 5.1E-20 T 29-03-2018 IPR007502 Helicase-associated domain GO:0004386 AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 SUPERFAMILY SSF55073 454 609 2.9E-50 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 SMART SM00267 438 610 7.0E-63 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 Gene3D G3DSA:3.30.70.270 442 611 1.9E-60 T 29-03-2018 AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 449 604 6.7E-49 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 Pfam PF07695 7TM diverse intracellular signalling 184 387 3.3E-37 T 29-03-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 Pfam PF07696 7TMR-DISM extracellular 2 38 172 1.1E-25 T 29-03-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 445 609 1.7E-48 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18550 76e414d278ea3c96eecbbf8968136d7d 626 Gene3D G3DSA:1.20.1600.10 51 441 3.6E-4 T 29-03-2018 AM474_RS06440 5491aac8de0524ffc9ce3a3b2ec01697 328 Pfam PF04773 FecR protein 115 210 5.8E-16 T 29-03-2018 IPR006860 FecR protein AM474_RS06440 5491aac8de0524ffc9ce3a3b2ec01697 328 PIRSF PIRSF018266 2 325 5.6E-80 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS06440 5491aac8de0524ffc9ce3a3b2ec01697 328 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 6.7E-10 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 SUPERFAMILY SSF56796 3 354 3.27E-119 T 29-03-2018 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.798 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 Gene3D G3DSA:3.40.50.1970 8 170 6.2E-52 T 29-03-2018 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 Gene3D G3DSA:1.20.1090.10 171 359 5.6E-64 T 29-03-2018 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 8.1E-116 T 29-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 PIRSF PIRSF001455 3 359 3.4E-107 T 29-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM474_RS17965 b25f2b5ede4b78c8dd88636dff639020 368 Pfam PF01761 3-dehydroquinate synthase 65 323 2.7E-108 T 29-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:1.10.10.10 1 70 4.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00345 12 71 3.3E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.2E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.2E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 SMART SM00866 92 231 1.9E-29 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.5E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 Gene3D G3DSA:3.40.1410.10 71 238 5.8E-34 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF46785 5 78 8.65E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 Pfam PF07702 UTRA domain 92 230 1.0E-37 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS05525 560f2fb4433ba7c34668749bd5b14351 238 SUPERFAMILY SSF64288 59 235 5.81E-41 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 SUPERFAMILY SSF52172 2 163 5.98E-32 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 SUPERFAMILY SSF46894 145 207 2.21E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 Gene3D G3DSA:3.40.50.2300 1 125 3.0E-31 T 29-03-2018 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 SMART SM00421 144 201 2.1E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 9.3E-24 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 SMART SM00448 2 114 2.2E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.6E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 Gene3D G3DSA:1.10.10.10 126 207 2.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14685 b2eaa970451a2e99e40bef53d015cdf0 207 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS31375 44a5b11ac20873ad8efa803be349c6ee 186 Pfam PF03358 NADPH-dependent FMN reductase 6 150 9.3E-30 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS31375 44a5b11ac20873ad8efa803be349c6ee 186 Gene3D G3DSA:3.40.50.360 2 180 5.8E-33 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS31375 44a5b11ac20873ad8efa803be349c6ee 186 SUPERFAMILY SSF52218 1 176 4.35E-34 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS31375 44a5b11ac20873ad8efa803be349c6ee 186 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 177 4.7E-79 T 29-03-2018 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AM474_RS30375 4e8c07abf33da974cb8d65580fcbdf3c 441 Gene3D G3DSA:1.20.1250.20 244 440 1.4E-16 T 29-03-2018 AM474_RS30375 4e8c07abf33da974cb8d65580fcbdf3c 441 Gene3D G3DSA:1.20.1250.20 19 223 6.4E-36 T 29-03-2018 AM474_RS30375 4e8c07abf33da974cb8d65580fcbdf3c 441 SUPERFAMILY SSF103473 13 432 1.31E-70 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30375 4e8c07abf33da974cb8d65580fcbdf3c 441 Pfam PF07690 Major Facilitator Superfamily 35 397 2.9E-49 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS31435 6c385e47d01d1b0a71e9d4e0c26d36c8 597 Pfam PF05947 Type VI secretion system, TssF 10 593 2.2E-184 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS31435 6c385e47d01d1b0a71e9d4e0c26d36c8 597 PIRSF PIRSF028304 5 596 6.2E-187 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS31435 6c385e47d01d1b0a71e9d4e0c26d36c8 597 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 9 593 3.3E-183 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS11310 8c97b0ff3c4db72a66176e1163310812 447 Gene3D G3DSA:3.10.350.10 71 156 0.003 T 29-03-2018 AM474_RS11310 8c97b0ff3c4db72a66176e1163310812 447 SUPERFAMILY SSF51261 156 404 2.41E-73 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS11310 8c97b0ff3c4db72a66176e1163310812 447 Pfam PF01551 Peptidase family M23 307 403 1.2E-32 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS11310 8c97b0ff3c4db72a66176e1163310812 447 Gene3D G3DSA:2.70.70.10 273 447 1.9E-40 T 29-03-2018 AM474_RS11310 8c97b0ff3c4db72a66176e1163310812 447 Pfam PF04225 Opacity-associated protein A LysM-like domain 81 161 5.0E-11 T 29-03-2018 IPR007340 Opacity-associated protein A AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.6E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.9E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 Gene3D G3DSA:3.40.190.10 94 187 6.9E-23 T 29-03-2018 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 Gene3D G3DSA:1.10.10.10 2 88 2.0E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 SUPERFAMILY SSF53850 94 302 6.88E-42 T 29-03-2018 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 Pfam PF03466 LysR substrate binding domain 93 301 8.7E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 Gene3D G3DSA:3.40.190.10 188 273 3.6E-17 T 29-03-2018 AM474_RS00545 21288bfe49c7f2ab51865d2d3fd0fa00 303 SUPERFAMILY SSF46785 7 117 4.47E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Pfam PF00158 Sigma-54 interaction domain 150 309 5.2E-59 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 SMART SM00382 166 308 1.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Pfam PF08448 PAS fold 27 135 3.9E-16 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Gene3D G3DSA:1.10.8.60 318 384 2.7E-17 T 29-03-2018 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Pfam PF02954 Bacterial regulatory protein, Fis family 416 456 9.1E-10 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Gene3D G3DSA:3.40.50.300 135 317 1.6E-24 T 29-03-2018 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 4.9E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 4.9E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 SUPERFAMILY SSF52540 155 384 5.81E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 SUPERFAMILY SSF55785 22 124 3.14E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Gene3D G3DSA:3.30.450.20 13 134 4.3E-10 T 29-03-2018 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 Gene3D G3DSA:1.10.10.60 385 462 2.2E-14 T 29-03-2018 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 SUPERFAMILY SSF46689 385 458 7.89E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS24960 c9200c43d7896b20dccada6c7d1d6018 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 PIRSF PIRSF002070 1 159 8.8E-41 T 29-03-2018 AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 Gene3D G3DSA:2.40.50.140 1 118 9.7E-46 T 29-03-2018 AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 SUPERFAMILY SSF50249 3 165 2.78E-61 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 165 4.9E-62 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 Pfam PF00436 Single-strand binding protein family 5 111 3.9E-43 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM474_RS11015 3bc26d49d732dc3f67de58190a78e8a4 165 Hamap MF_00984 Single-stranded DNA-binding protein. 5 116 39.463 T 29-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM474_RS20200 087cb0ca58126dbc033ccf2b06ff7aa6 568 Pfam PF08479 POTRA domain, ShlB-type 71 146 1.3E-22 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM474_RS20200 087cb0ca58126dbc033ccf2b06ff7aa6 568 Gene3D G3DSA:3.10.20.310 74 146 3.8E-19 T 29-03-2018 AM474_RS20200 087cb0ca58126dbc033ccf2b06ff7aa6 568 Gene3D G3DSA:2.40.160.50 176 568 3.5E-36 T 29-03-2018 AM474_RS20200 087cb0ca58126dbc033ccf2b06ff7aa6 568 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 528 1.7E-21 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM474_RS06990 80d5fdf6347d0133c58bb3867e1d0d88 108 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.8E-46 T 29-03-2018 IPR004480 Monothiol glutaredoxin-related AM474_RS06990 80d5fdf6347d0133c58bb3867e1d0d88 108 Pfam PF00462 Glutaredoxin 16 80 1.5E-18 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM474_RS06990 80d5fdf6347d0133c58bb3867e1d0d88 108 SUPERFAMILY SSF52833 1 103 1.53E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS06990 80d5fdf6347d0133c58bb3867e1d0d88 108 Gene3D G3DSA:3.40.30.10 1 108 1.5E-29 T 29-03-2018 AM474_RS06990 80d5fdf6347d0133c58bb3867e1d0d88 108 PIRSF PIRSF005894 1 107 1.8E-50 T 29-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AM474_RS18595 7a39db03a79f74f72a469f86eb9a4b2b 307 SUPERFAMILY SSF52266 277 302 1.83E-10 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS18595 7a39db03a79f74f72a469f86eb9a4b2b 307 SUPERFAMILY SSF52266 76 242 1.83E-10 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS18595 7a39db03a79f74f72a469f86eb9a4b2b 307 SUPERFAMILY SSF52266 31 47 1.83E-10 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS18595 7a39db03a79f74f72a469f86eb9a4b2b 307 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 300 3.6E-5 T 29-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 AM474_RS18595 7a39db03a79f74f72a469f86eb9a4b2b 307 Gene3D G3DSA:3.40.50.1110 17 307 6.6E-47 T 29-03-2018 AM474_RS09705 5dec418e6eecf9313b0989b71b9ae05e 130 SUPERFAMILY SSF46458 5 130 3.2E-34 T 29-03-2018 IPR009050 Globin-like AM474_RS09705 5dec418e6eecf9313b0989b71b9ae05e 130 Gene3D G3DSA:1.10.490.10 3 127 5.0E-18 T 29-03-2018 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 Gene3D G3DSA:1.10.10.10 3 78 3.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 Gene3D G3DSA:3.40.1410.10 85 239 2.6E-35 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 SUPERFAMILY SSF46785 12 89 5.77E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.7E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.7E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 SMART SM00345 20 77 5.1E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 SUPERFAMILY SSF64288 65 238 8.32E-39 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 16 238 2.7E-50 T 29-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 SMART SM00866 98 235 4.1E-27 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 2.7E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS06280 0548e7aaf6a9b469f70807a8ac2270c5 240 Pfam PF07702 UTRA domain 98 235 1.0E-30 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS24320 2e80b52abd07e1bb525b78f411a09344 74 Pfam PF00550 Phosphopantetheine attachment site 20 72 2.2E-5 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS24320 2e80b52abd07e1bb525b78f411a09344 74 SUPERFAMILY SSF47336 8 72 7.59E-10 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS24320 2e80b52abd07e1bb525b78f411a09344 74 Gene3D G3DSA:1.10.1200.10 4 73 9.4E-8 T 29-03-2018 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Gene3D G3DSA:3.30.980.10 551 712 5.5E-45 T 29-03-2018 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF55186 550 706 7.59E-52 T 29-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF01411 tRNA synthetases class II (A) 5 552 2.0E-228 T 29-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 208.918 T 29-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 4.1E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 4.1E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 4.1E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 4.1E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 4.1E-31 T 29-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF101353 254 452 6.02E-63 T 29-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF02272 DHHA1 domain 732 870 1.9E-27 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF55681 2 253 7.46E-107 T 29-03-2018 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Gene3D G3DSA:3.30.930.10 1 250 1.6E-115 T 29-03-2018 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 695 4.3E-19 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 SUPERFAMILY SSF50447 452 550 1.69E-19 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS23195 d9db425b631c44d6c154710c49b6f4d8 874 SMART SM00863 651 695 8.2E-23 T 29-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 63 2.6E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 80 95 2.6E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.6E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 48 2.6E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 Pfam PF01022 Bacterial regulatory protein, arsR family 38 83 2.2E-14 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 SMART SM00418 31 109 4.0E-20 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 SUPERFAMILY SSF46785 22 103 6.91E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08335 127c4d93d03405ba6af203dc40f8f61b 118 Gene3D G3DSA:1.10.10.10 15 118 3.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12805 8ce9195bac449c10ce8b77f07b47470e 265 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 259 2.0E-113 T 29-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM474_RS12805 8ce9195bac449c10ce8b77f07b47470e 265 Gene3D G3DSA:3.20.20.70 8 265 1.4E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS12805 8ce9195bac449c10ce8b77f07b47470e 265 SUPERFAMILY SSF110399 10 251 6.28E-92 T 29-03-2018 AM474_RS12805 8ce9195bac449c10ce8b77f07b47470e 265 Hamap MF_00443 Thiazole synthase [thiG]. 10 265 42.991 T 29-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:3.40.50.740 110 196 1.5E-12 T 29-03-2018 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 104 9.9E-19 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 Pfam PF00384 Molybdopterin oxidoreductase 108 140 7.6E-7 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 SUPERFAMILY SSF53706 37 196 3.4E-54 T 29-03-2018 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 SMART SM00926 44 105 3.2E-22 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19160 04608cc2a8672a5db36cdb9af88c1312 196 Gene3D G3DSA:2.20.25.90 37 109 4.5E-22 T 29-03-2018 AM474_RS11265 4a7d0064975acf859e14a7e4dcbac952 234 Pfam PF05036 Sporulation related domain 78 148 2.4E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS11265 4a7d0064975acf859e14a7e4dcbac952 234 Gene3D G3DSA:3.30.70.1070 80 151 9.8E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS11265 4a7d0064975acf859e14a7e4dcbac952 234 Gene3D G3DSA:3.30.70.1070 154 226 3.6E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS11265 4a7d0064975acf859e14a7e4dcbac952 234 SUPERFAMILY SSF110997 80 148 1.31E-8 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS11265 4a7d0064975acf859e14a7e4dcbac952 234 SUPERFAMILY SSF110997 157 223 6.02E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 3.6E-106 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 PIRSF PIRSF000429 1 393 3.2E-133 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 Gene3D G3DSA:3.40.47.10 267 390 1.1E-31 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 SUPERFAMILY SSF53901 272 391 7.4E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 2.5E-149 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 6.9E-50 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 Gene3D G3DSA:3.40.47.10 1 266 2.5E-66 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS00680 25cf9efd62f532f68fe6052c19415b3d 393 SUPERFAMILY SSF53901 3 270 6.17E-91 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS31350 ed5cf1f1598f8d77f1c461699c511e10 375 SUPERFAMILY SSF51695 41 357 3.4E-59 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS31350 ed5cf1f1598f8d77f1c461699c511e10 375 Gene3D G3DSA:3.20.20.190 24 367 3.3E-63 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS31350 ed5cf1f1598f8d77f1c461699c511e10 375 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 351 6.3E-35 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 2.2E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 2.2E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 2.2E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 2.2E-23 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 147 3.5E-40 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 SUPERFAMILY SSF52788 1 147 2.09E-47 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 Gene3D G3DSA:3.40.50.2300 1 153 9.0E-49 T 29-03-2018 AM474_RS04095 ead25dd55c9f6511795cbd4bd264d74d 154 SMART SM00226 1 149 1.8E-47 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 SUPERFAMILY SSF52317 14 143 1.37E-37 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 Gene3D G3DSA:3.50.30.60 171 307 3.3E-30 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 Gene3D G3DSA:3.40.50.10740 7 170 8.3E-44 T 29-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 SUPERFAMILY SSF141986 157 304 9.42E-33 T 29-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 Pfam PF02016 LD-carboxypeptidase 18 299 2.5E-61 T 29-03-2018 IPR003507 Peptidase family S66 AM474_RS16840 a2c380cc2f06f7c1a338757cb505ffcd 307 PIRSF PIRSF028757 13 307 4.1E-87 T 29-03-2018 IPR003507 Peptidase family S66 AM474_RS17090 4395e7f45636c82949ef0eeac93e7ff9 229 Pfam PF04367 Protein of unknown function (DUF502) 72 175 3.4E-12 T 29-03-2018 IPR007462 Protein of unknown function DUF502 AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.10.10.10 1 76 2.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00345 15 74 4.9E-25 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.5E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.5E-11 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF46785 6 76 1.04E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 SMART SM00895 99 230 2.6E-21 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 SUPERFAMILY SSF48008 96 237 2.62E-26 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 Gene3D G3DSA:1.20.120.530 80 248 3.3E-29 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.7E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS19385 35bcc95d09e1428bcd5b6e800f10d226 257 Pfam PF07729 FCD domain 99 229 6.5E-27 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 172 22.047 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 SMART SM00271 4 69 1.1E-7 T 29-03-2018 IPR001623 DnaJ domain AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF00226 DnaJ domain 19 73 5.5E-7 T 29-03-2018 IPR001623 DnaJ domain AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 164 3.5E-16 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF47144 84 173 3.92E-23 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.10.287.110 2 82 4.4E-10 T 29-03-2018 IPR001623 DnaJ domain AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 17 171 6.9E-30 T 29-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 SUPERFAMILY SSF46565 6 77 6.02E-17 T 29-03-2018 IPR001623 DnaJ domain AM474_RS08755 d86db32bade4d3ae220a4ae78da5ac41 173 Gene3D G3DSA:1.20.1280.20 86 172 4.3E-22 T 29-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM474_RS26980 2aa12a5758b629c8b53c113002cedee0 79 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 1 78 25.787 T 29-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 AM474_RS26980 2aa12a5758b629c8b53c113002cedee0 79 Gene3D G3DSA:3.30.110.40 1 78 1.6E-29 T 29-03-2018 IPR001455 TusA-like domain AM474_RS26980 2aa12a5758b629c8b53c113002cedee0 79 SUPERFAMILY SSF64307 4 76 2.62E-25 T 29-03-2018 IPR001455 TusA-like domain AM474_RS26980 2aa12a5758b629c8b53c113002cedee0 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 29-03-2018 IPR001455 TusA-like domain AM474_RS26980 2aa12a5758b629c8b53c113002cedee0 79 Pfam PF01206 Sulfurtransferase TusA 8 76 3.6E-24 T 29-03-2018 IPR001455 TusA-like domain AM474_RS21650 26a4f729db4fb5dc82bd07fa67e07c4e 258 SMART SM00563 72 183 6.6E-29 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS21650 26a4f729db4fb5dc82bd07fa67e07c4e 258 Gene3D G3DSA:3.40.1130.10 41 251 5.6E-32 T 29-03-2018 AM474_RS21650 26a4f729db4fb5dc82bd07fa67e07c4e 258 Pfam PF01553 Acyltransferase 61 181 6.5E-21 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS21650 26a4f729db4fb5dc82bd07fa67e07c4e 258 SUPERFAMILY SSF69593 46 227 1.7E-25 T 29-03-2018 AM474_RS02615 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 103 120 4.5E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS02615 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 35 48 4.5E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS02615 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 139 156 4.5E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS02615 503e8ae52d9edc68c3fcbca94739299c 234 PRINTS PR01805 VacJ lipoprotein signature 52 68 4.5E-28 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS02615 503e8ae52d9edc68c3fcbca94739299c 234 Pfam PF04333 MlaA lipoprotein 34 223 5.7E-77 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 SUPERFAMILY SSF51735 2 248 4.42E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.6E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 Pfam PF00106 short chain dehydrogenase 4 190 2.7E-53 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 Gene3D G3DSA:3.40.50.720 2 278 4.2E-70 T 29-03-2018 AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.1E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.1E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.1E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00250 5c42fc5c2019351564e863bcd6abb15a 279 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 3.1E-4 T 29-03-2018 AM474_RS03860 769795433bda0b2ec5ecc5c59eba3196 319 Pfam PF12697 Alpha/beta hydrolase family 57 302 1.2E-18 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03860 769795433bda0b2ec5ecc5c59eba3196 319 Gene3D G3DSA:3.40.50.1820 33 316 2.0E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03860 769795433bda0b2ec5ecc5c59eba3196 319 SUPERFAMILY SSF53474 31 317 1.51E-63 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 SUPERFAMILY SSF52172 7 185 3.7E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 Gene3D G3DSA:1.10.10.10 126 230 4.1E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 Gene3D G3DSA:3.40.50.2300 1 125 1.7E-31 T 29-03-2018 AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 SMART SM00448 6 116 7.6E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 4.4E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 Pfam PF00072 Response regulator receiver domain 8 116 1.4E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS27360 bf78a08495a4a9fab75dca3671893ef2 230 SMART SM00862 151 227 2.8E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 145 158 2.2E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 67 85 2.2E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 255 271 2.2E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 131 144 2.2E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00412 Epoxide hydrolase signature 288 310 2.2E-5 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 SUPERFAMILY SSF53474 40 311 9.59E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Pfam PF00561 alpha/beta hydrolase fold 61 297 9.9E-21 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 8.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 257 271 8.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 8.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 101 8.4E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22805 bbd350abc15aaeb3dfcaeb8cb2d0d04e 313 Gene3D G3DSA:3.40.50.1820 37 312 6.4E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 SUPERFAMILY SSF46894 172 241 3.23E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 Pfam PF03472 Autoinducer binding domain 20 161 5.0E-24 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 180 234 1.3E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 TIGRFAM TIGR03541 reg_near_HchA: LuxR family transcriptional regulatory, chaperone HchA-associated 5 241 5.0E-109 T 29-03-2018 IPR019941 Transcription regulator LuxR, chaperone HchA-associated AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 2.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 Gene3D G3DSA:3.30.450.80 1 182 1.2E-25 T 29-03-2018 AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 Gene3D G3DSA:1.10.10.10 183 243 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 SUPERFAMILY SSF75516 8 171 6.67E-16 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS24605 779de4402759b6ab37004a18fd534a39 243 SMART SM00421 178 235 3.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 SUPERFAMILY SSF53790 307 556 8.51E-53 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 SUPERFAMILY SSF159672 8 212 8.63E-42 T 29-03-2018 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 Gene3D G3DSA:3.30.950.10 429 554 4.2E-51 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 Pfam PF11760 Cobalamin synthesis G N-terminal 52 130 6.3E-23 T 29-03-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 310 556 1.3E-84 T 29-03-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 309 520 6.5E-32 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03700 a34c6f5d6ed16cc644edfc6ac1210a9b 559 Gene3D G3DSA:3.30.420.180 200 428 1.3E-33 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM474_RS26390 9fd8384b341ec95dcd45d7642481ac3d 280 PIRSF PIRSF003092 2 273 1.1E-82 T 29-03-2018 IPR025501 ATP binding protein MinD AM474_RS26390 9fd8384b341ec95dcd45d7642481ac3d 280 Gene3D G3DSA:3.40.50.300 10 252 1.6E-53 T 29-03-2018 AM474_RS26390 9fd8384b341ec95dcd45d7642481ac3d 280 SUPERFAMILY SSF52540 11 269 1.86E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26390 9fd8384b341ec95dcd45d7642481ac3d 280 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 11 250 7.5E-25 T 29-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 SMART SM00382 222 367 2.0E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 416 425 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 SUPERFAMILY SSF55785 80 130 3.29E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Gene3D G3DSA:3.30.450.20 78 178 1.5E-6 T 29-03-2018 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Gene3D G3DSA:3.30.70.260 1 77 2.4E-6 T 29-03-2018 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Gene3D G3DSA:1.10.8.60 376 447 4.7E-21 T 29-03-2018 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 461 508 1.5E-24 T 29-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Gene3D G3DSA:3.40.50.300 196 374 1.1E-21 T 29-03-2018 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Pfam PF13188 PAS domain 81 133 2.6E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Pfam PF00158 Sigma-54 interaction domain 203 369 2.9E-64 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 Gene3D G3DSA:1.10.10.60 449 508 5.6E-7 T 29-03-2018 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 SUPERFAMILY SSF46689 456 508 2.45E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 SUPERFAMILY SSF52540 203 445 1.2E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31850 407c008885f9cff1ea90deff1adc230b 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 226 239 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS31550 34dfa323600ad9be467860c89e3c4c1d 474 SUPERFAMILY SSF56954 2 465 1.83E-105 T 29-03-2018 AM474_RS31550 34dfa323600ad9be467860c89e3c4c1d 474 Pfam PF02321 Outer membrane efflux protein 281 460 9.1E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS31550 34dfa323600ad9be467860c89e3c4c1d 474 Pfam PF02321 Outer membrane efflux protein 60 254 1.4E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS31550 34dfa323600ad9be467860c89e3c4c1d 474 Gene3D G3DSA:1.20.1600.10 18 468 4.0E-93 T 29-03-2018 AM474_RS31550 34dfa323600ad9be467860c89e3c4c1d 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 462 1.4E-104 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS15110 3cdb7f519f46d2de945a2382f6694058 133 SUPERFAMILY SSF160631 2 132 2.49E-42 T 29-03-2018 AM474_RS15110 3cdb7f519f46d2de945a2382f6694058 133 Pfam PF14567 SMI1-KNR4 cell-wall 2 131 1.3E-42 T 29-03-2018 AM474_RS15110 3cdb7f519f46d2de945a2382f6694058 133 Gene3D G3DSA:3.40.1580.10 1 133 9.2E-16 T 29-03-2018 AM474_RS15110 3cdb7f519f46d2de945a2382f6694058 133 SMART SM00860 21 128 0.0026 T 29-03-2018 IPR018958 Knr4/Smi1-like domain AM474_RS22615 aa33d03a8d0e0aaac70af4fdda4f85fa 494 Gene3D G3DSA:1.10.4100.10 1 341 1.6E-102 T 29-03-2018 AM474_RS22615 aa33d03a8d0e0aaac70af4fdda4f85fa 494 Gene3D G3DSA:1.10.4100.10 398 494 1.7E-14 T 29-03-2018 AM474_RS22615 aa33d03a8d0e0aaac70af4fdda4f85fa 494 Pfam PF03972 MmgE/PrpD family 18 477 5.0E-152 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM474_RS22615 aa33d03a8d0e0aaac70af4fdda4f85fa 494 SUPERFAMILY SSF103378 13 492 2.62E-152 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM474_RS22615 aa33d03a8d0e0aaac70af4fdda4f85fa 494 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 14 494 3.3E-279 T 29-03-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 SMART SM00859 6 120 2.5E-20 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 SUPERFAMILY SSF55347 135 319 2.0E-47 T 29-03-2018 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 Gene3D G3DSA:3.30.360.10 143 314 2.6E-41 T 29-03-2018 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 PIRSF PIRSF000148 4 336 1.3E-85 T 29-03-2018 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 318 4.7E-33 T 29-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 SUPERFAMILY SSF51735 5 154 4.76E-33 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 Gene3D G3DSA:3.40.50.720 1 142 6.6E-22 T 29-03-2018 AM474_RS04815 67c24d8854c148e6d3431064af2690c1 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 6.5E-23 T 29-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 SUPERFAMILY SSF54637 8 137 1.45E-41 T 29-03-2018 IPR029069 HotDog domain AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Pfam PF03061 Thioesterase superfamily 24 107 2.3E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 PIRSF PIRSF003230 3 142 1.6E-44 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 135 4.7E-48 T 29-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 130 5.5E-33 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM474_RS23575 7fa3ce9e7b30b34ab7c3b40d2c69fb37 148 Gene3D G3DSA:3.10.129.10 2 140 1.2E-38 T 29-03-2018 AM474_RS15130 fd4ea6680e58c8f002321de36ba2c587 464 Gene3D G3DSA:3.40.640.10 337 457 0.014 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15130 fd4ea6680e58c8f002321de36ba2c587 464 Gene3D G3DSA:3.90.1150.10 23 191 2.3E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS15130 fd4ea6680e58c8f002321de36ba2c587 464 SUPERFAMILY SSF53383 45 455 1.6E-82 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS15130 fd4ea6680e58c8f002321de36ba2c587 464 Gene3D G3DSA:3.40.640.10 192 336 5.2E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15130 fd4ea6680e58c8f002321de36ba2c587 464 Pfam PF00202 Aminotransferase class-III 50 428 1.5E-41 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS19210 09981ae0c1b4a1aee8878a0f7143f64d 205 Pfam PF13649 Methyltransferase domain 44 140 4.2E-12 T 29-03-2018 AM474_RS19210 09981ae0c1b4a1aee8878a0f7143f64d 205 Gene3D G3DSA:3.40.50.150 1 194 1.5E-21 T 29-03-2018 AM474_RS19210 09981ae0c1b4a1aee8878a0f7143f64d 205 SUPERFAMILY SSF53335 3 189 3.07E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS18170 91cee88dacbc47da6df048029c480800 294 Gene3D G3DSA:3.90.550.10 3 270 2.9E-51 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS18170 91cee88dacbc47da6df048029c480800 294 SUPERFAMILY SSF53448 8 225 1.22E-55 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS18170 91cee88dacbc47da6df048029c480800 294 Pfam PF00535 Glycosyl transferase family 2 13 180 1.3E-29 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS21775 7b21fbb948f6b0fd0675c3b3b451c170 127 Gene3D G3DSA:1.25.20.10 23 125 8.5E-5 T 29-03-2018 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 364 2.6E-184 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 9 362 6.8E-168 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 SUPERFAMILY SSF53383 8 367 6.53E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 Gene3D G3DSA:3.40.640.10 18 255 3.9E-30 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 Gene3D G3DSA:3.90.1150.10 256 367 2.7E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 Pfam PF00266 Aminotransferase class-V 37 304 1.3E-19 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 PIRSF PIRSF000524 1 370 5.2E-62 T 29-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 AM474_RS25615 30030b6fac1cbb03c58f9cda83016c5c 371 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 207.87 T 29-03-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 128 891 1.2E-201 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 134 891 2.8E-249 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 Gene3D G3DSA:2.170.130.10 147 272 2.5E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 Gene3D G3DSA:2.40.170.20 273 891 2.0E-70 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 257 4.3E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 Pfam PF00593 TonB dependent receptor 378 889 6.3E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 SUPERFAMILY SSF56935 578 737 6.31E-90 T 29-03-2018 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 SUPERFAMILY SSF56935 776 891 6.31E-90 T 29-03-2018 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 SUPERFAMILY SSF56935 138 548 6.31E-90 T 29-03-2018 AM474_RS06435 7f1bc024fb2917aab1b82f692d839ade 891 SMART SM00965 75 126 3.3E-5 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 SUPERFAMILY SSF56349 8 288 2.21E-59 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF00589 Phage integrase family 113 283 5.1E-52 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 65.88 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.443.10 112 292 1.6E-48 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 298 57.571 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 297 1.8E-119 T 29-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Gene3D G3DSA:1.10.150.130 5 108 8.1E-24 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS08055 7ef5027d1e9e1bad08f5f11c5f034a38 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 3.9E-19 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82714 187 267 2.62E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82714 710 789 6.8E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82693 45 129 1.1E-19 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:3.30.70.1430 559 656 1.1E-11 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82693 141 186 1.99E-23 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82693 272 328 1.99E-23 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82693 555 652 1.78E-13 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:3.30.2090.10 185 273 4.6E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:1.20.1640.10 810 1027 2.0E-36 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:1.20.1640.10 285 505 8.9E-43 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.6E-60 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:3.30.70.1430 44 146 4.8E-22 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82866 794 1018 2.09E-44 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Pfam PF00873 AcrB/AcrD/AcrF family 9 1014 1.0E-295 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 SUPERFAMILY SSF82866 294 494 1.01E-44 T 29-03-2018 AM474_RS26300 4c55489e77231c7532c88fa5a511c79b 1036 Gene3D G3DSA:3.30.2090.10 705 792 4.0E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:3.30.450.40 112 288 2.5E-35 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF46785 44 118 6.83E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 SUPERFAMILY SSF55781 111 286 7.19E-37 T 29-03-2018 IPR029016 GAF domain-like AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 SMART SM00346 44 134 2.6E-21 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF09339 IclR helix-turn-helix domain 46 95 3.0E-16 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 Pfam PF01614 Bacterial transcriptional regulator 162 278 1.4E-10 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS27325 873c2a3d8963f08df1f8c6b40dda81ba 288 Gene3D G3DSA:1.10.10.10 26 105 1.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30785 b7a2b252abff2783c968bd84b096995f 662 Gene3D G3DSA:3.40.50.300 508 662 7.1E-5 T 29-03-2018 AM474_RS30785 b7a2b252abff2783c968bd84b096995f 662 Pfam PF13807 G-rich domain on putative tyrosine kinase 403 479 1.7E-6 T 29-03-2018 IPR032807 Tyrosine kinase, G-rich domain AM474_RS30785 b7a2b252abff2783c968bd84b096995f 662 Gene3D G3DSA:3.30.1890.10 36 457 1.7E-12 T 29-03-2018 AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 SUPERFAMILY SSF51004 143 568 1.57E-128 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 Pfam PF02239 Cytochrome D1 heme domain 171 563 4.4E-167 T 29-03-2018 AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 Gene3D G3DSA:1.10.760.10 26 141 2.8E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 Gene3D G3DSA:2.140.10.20 143 568 2.1E-140 T 29-03-2018 AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 SUPERFAMILY SSF46626 36 159 5.59E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12095 4de57de0d4848e375e8556482e1b384e 568 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 134 6.2E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 Gene3D G3DSA:3.40.190.10 186 272 1.7E-17 T 29-03-2018 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 Gene3D G3DSA:3.40.190.10 92 185 3.2E-21 T 29-03-2018 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 Gene3D G3DSA:1.10.10.10 1 86 7.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 SUPERFAMILY SSF53850 94 298 7.11E-40 T 29-03-2018 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 SUPERFAMILY SSF46785 4 115 1.21E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 Pfam PF03466 LysR substrate binding domain 93 298 5.7E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12230 6d7dea33ad385955f1556f4b69d9ca65 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26900 ccf0fd169d0aa1460ba920d4023ea1d5 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 4.3E-9 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component AM474_RS11435 192e966caec40411e901c3753b2efa71 231 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 7 226 3.0E-76 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM474_RS11435 192e966caec40411e901c3753b2efa71 231 Pfam PF05100 Phage minor tail protein L 24 228 2.6E-96 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM474_RS21435 8f5f747c6ec0c79cc9516a564d96e841 127 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 30 109 2.7E-20 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS21435 8f5f747c6ec0c79cc9516a564d96e841 127 SUPERFAMILY SSF46767 29 110 8.76E-21 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS21435 8f5f747c6ec0c79cc9516a564d96e841 127 Gene3D G3DSA:1.10.10.10 23 127 9.4E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Gene3D G3DSA:3.40.250.10 8 120 2.6E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Gene3D G3DSA:3.40.250.10 374 480 3.0E-19 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SUPERFAMILY SSF52821 375 524 1.96E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SMART SM00450 131 229 3.9E-7 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SMART SM00450 8 105 7.0E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SMART SM00450 377 472 1.5E-5 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SMART SM00450 267 359 6.1E-7 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Gene3D G3DSA:3.40.250.10 246 356 5.0E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SUPERFAMILY SSF52821 14 121 9.95E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 ProSitePatterns PS00380 Rhodanese signature 1. 402 413 - T 29-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Gene3D G3DSA:3.40.250.10 121 245 7.4E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SUPERFAMILY SSF52821 106 235 6.94E-30 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Pfam PF00581 Rhodanese-like domain 16 101 1.7E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Pfam PF00581 Rhodanese-like domain 132 225 3.9E-9 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Pfam PF00581 Rhodanese-like domain 379 468 1.6E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 Pfam PF00581 Rhodanese-like domain 279 352 1.8E-8 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS00850 e39e75621d3a984ecd92174a1dc54520 527 SUPERFAMILY SSF52821 254 352 8.64E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:3.90.380.10 138 376 3.1E-31 T 29-03-2018 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 371 1.3E-15 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF55961 142 373 1.96E-29 T 29-03-2018 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 Gene3D G3DSA:2.102.10.10 26 137 8.8E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 SUPERFAMILY SSF50022 3 142 5.24E-36 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 Pfam PF00355 Rieske [2Fe-2S] domain 29 108 4.2E-13 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 13 38 8.6E-9 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 43 58 8.6E-9 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS24340 b8400f3085f74960b6fcefb0becf4699 376 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 8.6E-9 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS21240 6ae6e55629cb5971bb959dc7ae174b0d 260 Gene3D G3DSA:1.10.760.10 29 225 4.7E-50 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS21240 6ae6e55629cb5971bb959dc7ae174b0d 260 SUPERFAMILY SSF46626 16 159 2.36E-45 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS21240 6ae6e55629cb5971bb959dc7ae174b0d 260 SUPERFAMILY SSF46626 199 223 2.36E-45 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS21240 6ae6e55629cb5971bb959dc7ae174b0d 260 Gene3D G3DSA:1.20.5.100 229 259 3.7E-14 T 29-03-2018 AM474_RS21240 6ae6e55629cb5971bb959dc7ae174b0d 260 Pfam PF02167 Cytochrome C1 family 91 259 7.5E-10 T 29-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM474_RS01005 08c055557377b8f5377002adad93e8a3 273 Pfam PF00263 Bacterial type II and III secretion system protein 137 248 1.5E-7 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS01005 08c055557377b8f5377002adad93e8a3 273 Pfam PF03958 Bacterial type II/III secretion system short domain 26 83 1.6E-8 T 29-03-2018 IPR005644 NolW-like AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 Gene3D G3DSA:3.30.70.20 1 21 0.0025 T 29-03-2018 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 Gene3D G3DSA:3.30.70.20 22 76 9.4E-9 T 29-03-2018 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 PRINTS PR00352 3Fe-4S ferredoxin signature 23 33 7.7E-6 T 29-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 PRINTS PR00352 3Fe-4S ferredoxin signature 54 66 7.7E-6 T 29-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 PRINTS PR00352 3Fe-4S ferredoxin signature 12 23 7.7E-6 T 29-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 Pfam PF13459 4Fe-4S single cluster domain 10 66 1.2E-13 T 29-03-2018 AM474_RS00400 6b5b3f80d603f2ff3ff45c55d1ebf522 76 SUPERFAMILY SSF54862 10 68 4.47E-12 T 29-03-2018 AM474_RS19655 6b4e98327eb99553c4bbd656ca75c4a4 235 Pfam PF03749 Sugar fermentation stimulation protein 13 226 2.5E-72 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM474_RS19655 6b4e98327eb99553c4bbd656ca75c4a4 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 56.604 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM474_RS19655 6b4e98327eb99553c4bbd656ca75c4a4 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 233 3.6E-64 T 29-03-2018 IPR005224 Sugar fermentation stimulation protein AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 SMART SM00347 35 133 1.2E-22 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 SUPERFAMILY SSF46785 8 148 2.61E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 Pfam PF01047 MarR family 42 100 1.5E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.0E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.0E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.0E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03425 88ea5b16c74d41b6e4035955aade0bbf 151 Gene3D G3DSA:1.10.10.10 3 149 1.9E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12065 4b487dba659ca8ea980eeef349dd17ca 612 SMART SM00327 421 604 6.7E-21 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS12065 4b487dba659ca8ea980eeef349dd17ca 612 Gene3D G3DSA:3.40.50.410 395 609 4.2E-15 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS12065 4b487dba659ca8ea980eeef349dd17ca 612 SUPERFAMILY SSF53300 424 608 8.71E-19 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS12065 4b487dba659ca8ea980eeef349dd17ca 612 Pfam PF00092 von Willebrand factor type A domain 427 575 2.8E-5 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:2.40.30.10 513 648 3.4E-30 T 29-03-2018 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:2.40.30.10 741 839 1.5E-28 T 29-03-2018 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF52156 621 747 5.75E-34 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 265 315 1.9E-14 T 29-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF52540 332 510 1.71E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 2.5E-11 T 29-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF46955 3 51 5.86E-10 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.30.56.50 4 46 1.5E-7 T 29-03-2018 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.30.56.50 267 308 2.2E-9 T 29-03-2018 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF50447 742 838 2.75E-32 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 343 499 2.7E-31 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.40.50.10050 649 719 5.5E-24 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 259 839 1.4E-263 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 838 17.305 T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF11987 Translation-initiation factor 2 625 730 2.0E-34 T 29-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 SUPERFAMILY SSF50447 513 595 1.79E-26 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Gene3D G3DSA:3.40.50.300 337 511 2.1E-39 T 29-03-2018 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 Pfam PF00009 Elongation factor Tu GTP binding domain 344 501 2.0E-34 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS19525 be549ce9d49b50a899bdd81d2f309ed6 840 ProSitePatterns PS01176 Initiation factor 2 signature. 791 813 - T 29-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 Gene3D G3DSA:2.40.170.20 260 812 5.0E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 SMART SM00965 53 104 4.9E-14 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 Gene3D G3DSA:2.170.130.10 112 244 5.8E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 Pfam PF00593 TonB dependent receptor 344 809 8.2E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 238 3.0E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 SUPERFAMILY SSF56935 122 813 2.62E-95 T 29-03-2018 AM474_RS25900 a30881c6281f7e756d563a7bf27a33f8 813 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 139 794 5.3E-103 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 SUPERFAMILY SSF56645 5 244 5.1E-74 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 7.7E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 5.2E-27 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:2.40.110.10 122 220 3.6E-37 T 29-03-2018 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:1.10.540.10 1 121 5.6E-32 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 SUPERFAMILY SSF47203 231 380 3.22E-47 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 220 1.2E-23 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS26805 87a976d9f45c1381503d678cdade9818 382 Gene3D G3DSA:1.20.140.10 221 381 1.3E-53 T 29-03-2018 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 SUPERFAMILY SSF46589 1 112 6.28E-31 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.0E-30 T 29-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PIRSF PIRSF001529 1 426 3.6E-180 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 41.259 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 402 4.5E-36 T 29-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 7.7E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 7.7E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 7.7E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 7.7E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 7.7E-34 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Gene3D G3DSA:1.10.287.40 2 104 6.4E-26 T 29-03-2018 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 2.3E-172 T 29-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 SUPERFAMILY SSF55681 116 423 2.49E-102 T 29-03-2018 AM474_RS00900 e47cd8c6ae3c2b3b6ce4cdd57f7c333a 426 Gene3D G3DSA:3.30.930.10 105 426 3.0E-100 T 29-03-2018 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 Gene3D G3DSA:2.170.130.10 40 182 6.1E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 720 1.5E-176 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 174 1.1E-11 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 SUPERFAMILY SSF56935 43 720 7.85E-130 T 29-03-2018 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 Pfam PF00593 TonB dependent receptor 288 717 2.4E-52 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS10960 1a3231113b84e2ded0ca0dbd8c45d5c9 720 Gene3D G3DSA:2.40.170.20 183 720 2.2E-95 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 3.3E-236 T 29-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.309.10 273 464 3.4E-71 T 29-03-2018 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 Gene3D G3DSA:3.40.605.10 5 272 7.8E-106 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 SUPERFAMILY SSF53720 7 481 5.11E-175 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS13435 d8cd957ef946826f56b974138e37e5bd 483 Pfam PF00171 Aldehyde dehydrogenase family 19 477 4.4E-173 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS12655 4ee9ba721d1293396a13e430b5b1023b 178 Pfam PF01584 CheW-like domain 38 169 7.0E-27 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12655 4ee9ba721d1293396a13e430b5b1023b 178 SMART SM00260 32 168 2.1E-29 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12655 4ee9ba721d1293396a13e430b5b1023b 178 Gene3D G3DSA:2.30.30.40 118 160 6.4E-4 T 29-03-2018 AM474_RS12655 4ee9ba721d1293396a13e430b5b1023b 178 SUPERFAMILY SSF50341 33 170 3.79E-28 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS12655 4ee9ba721d1293396a13e430b5b1023b 178 Gene3D G3DSA:2.40.50.180 53 117 1.2E-17 T 29-03-2018 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 29-03-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 3 19 4.3E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 PRINTS PR00163 Rubredoxin signature 33 49 4.3E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 Gene3D G3DSA:2.20.28.10 1 54 6.0E-27 T 29-03-2018 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 SUPERFAMILY SSF57802 1 53 1.26E-22 T 29-03-2018 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 Pfam PF00301 Rubredoxin 3 49 4.1E-23 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16055 4d3c99bfef1d234c961d169f8a0ea9a8 55 PIRSF PIRSF000071 1 55 8.9E-26 T 29-03-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 Pfam PF12833 Helix-turn-helix domain 258 335 2.5E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 206 9.2E-37 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 SUPERFAMILY SSF46689 287 337 2.28E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 SMART SM00342 251 333 1.2E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 Gene3D G3DSA:1.10.10.60 290 352 8.8E-14 T 29-03-2018 AM474_RS17995 9810955cf6fabfafb7491c0368f54c0b 357 Gene3D G3DSA:1.10.10.60 119 289 0.0058 T 29-03-2018 AM474_RS22055 75da13ad9d1652e0342dc44a3d212653 198 SUPERFAMILY SSF48613 14 196 5.72E-55 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS22055 75da13ad9d1652e0342dc44a3d212653 198 Gene3D G3DSA:1.20.910.10 1 198 1.9E-26 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS22055 75da13ad9d1652e0342dc44a3d212653 198 Pfam PF01126 Heme oxygenase 15 194 4.7E-35 T 29-03-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 Gene3D G3DSA:3.40.50.300 282 461 1.3E-19 T 29-03-2018 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 Gene3D G3DSA:3.40.50.300 524 977 1.4E-4 T 29-03-2018 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 41 224 2.6E-24 T 29-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 SMART SM00487 285 475 1.9E-11 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 42 692 9.3E-154 T 29-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 Pfam PF04851 Type III restriction enzyme, res subunit 289 446 7.9E-18 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM474_RS01560 87106b12b7d78e29c1ad4cd2191258b0 997 SUPERFAMILY SSF52540 256 497 2.35E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19900 e2a8ef443277e3c2811f12804e369e0c 150 SUPERFAMILY SSF55729 5 148 6.92E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS19900 e2a8ef443277e3c2811f12804e369e0c 150 Pfam PF00583 Acetyltransferase (GNAT) family 29 122 2.9E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS19900 e2a8ef443277e3c2811f12804e369e0c 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 2.5E-48 T 29-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 AM474_RS19900 e2a8ef443277e3c2811f12804e369e0c 150 Gene3D G3DSA:3.40.630.30 4 150 1.7E-35 T 29-03-2018 AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 Pfam PF03466 LysR substrate binding domain 90 290 2.6E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.0E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 Gene3D G3DSA:1.10.10.10 2 83 9.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 SUPERFAMILY SSF53850 92 295 5.07E-35 T 29-03-2018 AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 Gene3D G3DSA:3.40.190.10 176 262 7.8E-17 T 29-03-2018 AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 Gene3D G3DSA:3.40.190.10 90 175 5.9E-13 T 29-03-2018 AM474_RS03205 d8d6cee5cb714a9cb975f3cc23670abb 301 SUPERFAMILY SSF46785 5 114 1.48E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28140 b4f08d2535fb89bcd66502a9b89f5aae 108 SUPERFAMILY SSF50022 1 103 1.57E-34 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS28140 b4f08d2535fb89bcd66502a9b89f5aae 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 99 9.3E-33 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM474_RS28140 b4f08d2535fb89bcd66502a9b89f5aae 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 98 2.6E-15 T 29-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 AM474_RS28140 b4f08d2535fb89bcd66502a9b89f5aae 108 Gene3D G3DSA:2.102.10.10 1 106 4.5E-26 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS13595 e3d9ae0ae318b593aee02c5df43df282 271 SUPERFAMILY SSF51658 5 270 2.8E-61 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS13595 e3d9ae0ae318b593aee02c5df43df282 271 Gene3D G3DSA:3.20.20.150 3 271 1.2E-32 T 29-03-2018 AM474_RS13595 e3d9ae0ae318b593aee02c5df43df282 271 Pfam PF01261 Xylose isomerase-like TIM barrel 22 221 6.2E-16 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS15560 4f8ce59e1562edfbc1c019b4985fb77b 464 Gene3D G3DSA:3.20.20.70 6 177 3.0E-5 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15560 4f8ce59e1562edfbc1c019b4985fb77b 464 Pfam PF01136 Peptidase family U32 80 337 6.8E-98 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM474_RS15560 4f8ce59e1562edfbc1c019b4985fb77b 464 Pfam PF16325 Peptidase family U32 C-terminal domain 354 435 4.6E-20 T 29-03-2018 IPR032525 Peptidase family U32, C-terminal AM474_RS15560 4f8ce59e1562edfbc1c019b4985fb77b 464 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM474_RS19330 75d04b79aff4a07143867b2b660ee8d7 297 SUPERFAMILY SSF103481 185 282 4.58E-13 T 29-03-2018 AM474_RS19330 75d04b79aff4a07143867b2b660ee8d7 297 Pfam PF00892 EamA-like transporter family 6 130 6.4E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19330 75d04b79aff4a07143867b2b660ee8d7 297 Pfam PF00892 EamA-like transporter family 142 280 9.7E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19330 75d04b79aff4a07143867b2b660ee8d7 297 SUPERFAMILY SSF103481 39 134 4.97E-12 T 29-03-2018 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Pfam PF05226 CHASE2 domain 35 323 1.7E-54 T 29-03-2018 IPR007890 CHASE2 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 654 761 2.5E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Pfam PF08448 PAS fold 439 540 2.7E-6 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SUPERFAMILY SSF55785 418 535 2.86E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 2.9E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 723 741 2.9E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 747 760 2.9E-13 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SMART SM00387 653 763 1.1E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SMART SM01080 43 326 1.6E-87 T 29-03-2018 IPR007890 CHASE2 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Gene3D G3DSA:3.30.565.10 611 766 1.9E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SUPERFAMILY SSF47384 537 608 8.24E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SUPERFAMILY SSF55874 603 762 4.85E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Gene3D G3DSA:1.10.287.130 542 604 1.6E-6 T 29-03-2018 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 Gene3D G3DSA:3.30.450.20 419 541 1.9E-12 T 29-03-2018 AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 SMART SM00091 433 500 1.5E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS10050 56f038b6c082a54b584d690ec47ad37d 766 PIRSF PIRSF037347 2 766 1.9E-190 T 29-03-2018 IPR017181 Signal transduction histidine kinase, CHASE2 sensor domain-containing, predicted AM474_RS32000 8e875945d6dccdcbc96b5ac12e2cc147 232 SUPERFAMILY SSF56529 21 232 9.03E-68 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS32000 8e875945d6dccdcbc96b5ac12e2cc147 232 Gene3D G3DSA:3.90.850.10 6 232 2.9E-74 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS32000 8e875945d6dccdcbc96b5ac12e2cc147 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 231 5.7E-52 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS14210 450f44bb4e59cec418e5f196abd8ffd1 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 5.3E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS14210 450f44bb4e59cec418e5f196abd8ffd1 150 SUPERFAMILY SSF55729 3 149 2.57E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS14210 450f44bb4e59cec418e5f196abd8ffd1 150 Gene3D G3DSA:3.40.630.30 2 150 4.1E-29 T 29-03-2018 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 Gene3D G3DSA:1.10.357.10 143 292 9.6E-4 T 29-03-2018 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 6.0E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 6.0E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 Pfam PF12833 Helix-turn-helix domain 253 331 3.2E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 SMART SM00342 247 329 1.7E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 5.8E-46 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 Gene3D G3DSA:1.10.10.60 293 335 1.3E-15 T 29-03-2018 AM474_RS05325 d35fdbdd3d00af0d8fb82b721032376e 337 SUPERFAMILY SSF46689 283 331 9.41E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 470 8.0E-150 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Gene3D G3DSA:3.20.20.60 157 318 4.3E-61 T 29-03-2018 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 SUPERFAMILY SSF50800 73 168 8.9E-26 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Gene3D G3DSA:2.40.33.10 87 156 2.5E-25 T 29-03-2018 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Gene3D G3DSA:3.40.1380.20 319 471 3.5E-45 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 SUPERFAMILY SSF52935 320 470 3.4E-37 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 SUPERFAMILY SSF51621 157 339 7.68E-91 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 SUPERFAMILY SSF51621 4 77 7.68E-91 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.2E-60 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 3.9E-27 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Gene3D G3DSA:3.20.20.60 1 86 5.4E-15 T 29-03-2018 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 1.3E-110 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS26610 19eda188224412327ff4288ee93fd386 477 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.8E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 Gene3D G3DSA:3.90.1150.10 378 473 7.7E-16 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 Pfam PF00155 Aminotransferase class I and II 140 392 3.7E-18 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 SMART SM00345 17 76 2.8E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.1E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.1E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 Gene3D G3DSA:3.40.640.10 136 377 6.6E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 SUPERFAMILY SSF53383 117 472 6.48E-84 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 Gene3D G3DSA:1.10.10.10 8 78 2.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13410 41da6c310a0d07e5732acabeb0c0d3dd 473 SUPERFAMILY SSF46785 10 80 8.52E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09240 d25e4618f67c4c4ec5510c654766e7a7 153 Gene3D G3DSA:3.40.1420.10 28 146 2.7E-38 T 29-03-2018 AM474_RS09240 d25e4618f67c4c4ec5510c654766e7a7 153 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 36 151 1.9E-42 T 29-03-2018 AM474_RS09240 d25e4618f67c4c4ec5510c654766e7a7 153 SUPERFAMILY SSF89872 25 153 2.49E-51 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM474_RS09240 d25e4618f67c4c4ec5510c654766e7a7 153 PIRSF PIRSF009103 1 153 1.1E-62 T 29-03-2018 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF46785 161 239 3.11E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 SUPERFAMILY SSF51206 18 157 4.32E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:2.60.120.10 31 159 1.5E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 Gene3D G3DSA:1.10.10.10 160 243 6.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00027 Cyclic nucleotide-binding domain 45 129 4.6E-16 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 9.9E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 9.9E-12 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 Pfam PF00325 Bacterial regulatory proteins, crp family 188 219 9.8E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 29-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00419 182 230 3.6E-16 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS26850 cbf5001cdb797fd5836264fd1665a83d 244 SMART SM00100 25 146 1.4E-19 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 Gene3D G3DSA:3.90.1150.10 260 394 4.5E-58 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 PIRSF PIRSF001434 1 394 1.1E-147 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 391 5.9E-153 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 SUPERFAMILY SSF53383 17 393 5.32E-121 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS12705 0e05171ed5d3c56225f908cc886d5be3 394 Gene3D G3DSA:3.40.640.10 13 259 3.8E-59 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 Gene3D G3DSA:2.40.10.200 505 609 2.7E-40 T 29-03-2018 AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 Pfam PF07514 Putative helicase 27 339 5.2E-129 T 29-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 SUPERFAMILY SSF46785 484 610 1.58E-43 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 487 609 4.2E-50 T 29-03-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 26 243 3.2E-89 T 29-03-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class AM474_RS03140 eeaccd206ed9e6415a905efcd52b0bea 614 Gene3D G3DSA:1.10.3210.10 76 278 1.3E-7 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 Gene3D G3DSA:3.40.50.2000 309 488 3.0E-34 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 SUPERFAMILY SSF53756 157 217 5.58E-59 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 SUPERFAMILY SSF53756 247 502 5.58E-59 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 SUPERFAMILY SSF53756 16 59 5.58E-59 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 Pfam PF11997 Domain of unknown function (DUF3492) 12 290 5.7E-92 T 29-03-2018 IPR022622 Domain of unknown function DUF3492 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 Gene3D G3DSA:3.40.50.2000 72 308 4.9E-10 T 29-03-2018 AM474_RS04520 a6c93fe059722e6483e76a17b6a148da 507 Pfam PF13692 Glycosyl transferases group 1 318 468 6.6E-22 T 29-03-2018 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF02421 Ferrous iron transport protein B 6 163 8.0E-63 T 29-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 SUPERFAMILY SSF52540 4 167 8.76E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07670 Nucleoside recognition 509 687 2.3E-36 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07670 Nucleoside recognition 349 442 2.1E-13 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 5.6E-22 T 29-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 Gene3D G3DSA:3.40.50.300 2 269 4.4E-32 T 29-03-2018 AM474_RS21615 e33b687b4abb604e7f9b30e6e3decfb1 766 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 685 5.2E-210 T 29-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AM474_RS24070 c212f9e6815529e69ab652c13c8b6d09 99 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 4.0E-19 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 AM474_RS04565 9e92d2d892f274a279d5c890ff35fdc6 312 Pfam PF01882 Protein of unknown function DUF58 49 133 2.0E-20 T 29-03-2018 IPR002881 Domain of unknown function DUF58 AM474_RS04565 9e92d2d892f274a279d5c890ff35fdc6 312 Gene3D G3DSA:3.40.50.410 61 309 6.4E-18 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS09315 26201e77b94fc74556eff23a82b82218 83 SUPERFAMILY SSF54285 1 83 5.61E-22 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM474_RS09315 26201e77b94fc74556eff23a82b82218 83 Gene3D G3DSA:3.10.20.30 1 83 4.8E-18 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS09315 26201e77b94fc74556eff23a82b82218 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 83 2.6E-19 T 29-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 AM474_RS09315 26201e77b94fc74556eff23a82b82218 83 Pfam PF02597 ThiS family 4 83 3.2E-19 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM474_RS27965 5ad5b85f83d629be6dbc933f6c199194 229 SUPERFAMILY SSF52096 3 224 2.39E-45 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS27965 5ad5b85f83d629be6dbc933f6c199194 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 226 2.1E-32 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS27965 5ad5b85f83d629be6dbc933f6c199194 229 Gene3D G3DSA:3.90.226.10 1 229 3.0E-41 T 29-03-2018 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SUPERFAMILY SSF48403 18 209 7.33E-46 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 Pfam PF12796 Ankyrin repeats (3 copies) 89 182 1.2E-12 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 PRINTS PR01415 Ankyrin repeat signature 167 181 8.1E-7 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 PRINTS PR01415 Ankyrin repeat signature 114 129 8.1E-7 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 Gene3D G3DSA:1.25.40.20 104 210 5.3E-29 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SMART SM00248 47 76 1.5E-4 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SMART SM00248 80 109 1800.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SMART SM00248 146 180 0.7 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SMART SM00248 113 142 0.017 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 SMART SM00248 14 43 3900.0 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 Pfam PF13606 Ankyrin repeat 47 75 0.0017 T 29-03-2018 IPR002110 Ankyrin repeat GO:0005515 AM474_RS32140 88f922da072e9006e5c86eaea09951bd 210 Gene3D G3DSA:1.25.40.20 13 103 4.7E-24 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 SUPERFAMILY SSF63411 290 473 2.0E-43 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 SUPERFAMILY SSF63411 61 267 1.28E-41 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 Pfam PF00675 Insulinase (Peptidase family M16) 80 203 3.9E-5 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 Gene3D G3DSA:3.30.830.10 41 279 3.7E-40 T 29-03-2018 AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 Gene3D G3DSA:3.30.830.10 285 483 5.2E-35 T 29-03-2018 AM474_RS12855 39588a0a391f200fc839f0432fd1a5c7 495 Pfam PF05193 Peptidase M16 inactive domain 230 405 5.0E-30 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 Pfam PF00155 Aminotransferase class I and II 39 378 2.3E-52 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 Gene3D G3DSA:3.90.1150.10 280 389 5.7E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 Gene3D G3DSA:3.40.640.10 84 279 1.1E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 378 4.6E-150 T 29-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 SUPERFAMILY SSF53383 6 385 8.95E-110 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS12190 b5614723eb34348090cdbaa4f72b36bf 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.276 T 29-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 Gene3D G3DSA:1.10.10.60 2 39 1.0E-12 T 29-03-2018 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 Gene3D G3DSA:1.10.260.40 40 79 6.5E-11 T 29-03-2018 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 2.8E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 SUPERFAMILY SSF46689 11 86 8.72E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 SUPERFAMILY SSF48498 84 209 4.45E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.0E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00485 b0ffa8b028ee2ff5dbbdc004baf4283a 217 Gene3D G3DSA:1.10.357.10 80 217 7.4E-11 T 29-03-2018 AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 SUPERFAMILY SSF141868 146 389 1.03E-72 T 29-03-2018 IPR001633 EAL domain AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 Pfam PF00072 Response regulator receiver domain 6 120 4.0E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 SMART SM00052 139 384 2.7E-70 T 29-03-2018 IPR001633 EAL domain AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 SUPERFAMILY SSF52172 1 182 6.55E-21 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 Gene3D G3DSA:3.40.50.2300 1 137 5.4E-20 T 29-03-2018 AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 Pfam PF00563 EAL domain 146 379 1.2E-63 T 29-03-2018 IPR001633 EAL domain AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 SMART SM00448 4 122 1.2E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09490 4be8e675748b694d7dc4eaf2266c5d73 392 Gene3D G3DSA:3.20.20.450 143 391 1.1E-77 T 29-03-2018 IPR001633 EAL domain AM474_RS32025 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF54423 27 86 3.92E-21 T 29-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AM474_RS32025 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.10.450.70 32 94 1.4E-21 T 29-03-2018 AM474_RS32025 0f8f04acaa73c2c26ac8629b80720935 256 Pfam PF13098 Thioredoxin-like domain 123 253 5.7E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32025 0f8f04acaa73c2c26ac8629b80720935 256 Gene3D G3DSA:3.40.30.10 112 254 2.5E-22 T 29-03-2018 AM474_RS32025 0f8f04acaa73c2c26ac8629b80720935 256 SUPERFAMILY SSF52833 96 253 8.25E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 114 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 Gene3D G3DSA:2.102.10.10 39 154 1.1E-20 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 Gene3D G3DSA:3.90.380.10 155 465 1.8E-56 T 29-03-2018 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 190 212 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 33 58 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 105 125 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 3.2E-45 T 29-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 169 410 5.5E-14 T 29-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 SUPERFAMILY SSF50022 18 162 4.19E-40 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 SUPERFAMILY SSF55961 166 465 1.31E-56 T 29-03-2018 AM474_RS00430 a321de54c5c6d27a3551bb8140c9a53f 465 Pfam PF00355 Rieske [2Fe-2S] domain 48 132 2.5E-16 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 Gene3D G3DSA:1.10.155.10 10 84 1.3E-16 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS12645 9966d92128808da5636df5486b2805ad 291 Pfam PF03705 CheR methyltransferase, all-alpha domain 18 70 5.3E-10 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS12645 9966d92128808da5636df5486b2805ad 291 SUPERFAMILY SSF53335 87 275 5.63E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS12645 9966d92128808da5636df5486b2805ad 291 SMART SM00138 17 283 4.9E-129 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 Pfam PF01739 CheR methyltransferase, SAM binding domain 86 272 3.1E-59 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM474_RS12645 9966d92128808da5636df5486b2805ad 291 Gene3D G3DSA:3.40.50.150 85 283 2.9E-36 T 29-03-2018 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 SUPERFAMILY SSF47757 7 85 2.88E-15 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 79 91 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS12645 9966d92128808da5636df5486b2805ad 291 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 2.3E-36 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 Pfam PF13307 Helicase C-terminal domain 596 756 3.4E-32 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 Gene3D G3DSA:3.40.50.300 188 561 3.6E-19 T 29-03-2018 AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SUPERFAMILY SSF52540 520 682 3.64E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SUPERFAMILY SSF52540 714 739 3.64E-8 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 Gene3D G3DSA:3.40.50.300 571 751 2.0E-7 T 29-03-2018 AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SUPERFAMILY SSF52540 155 292 2.85E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SUPERFAMILY SSF52540 344 398 2.85E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SUPERFAMILY SSF52540 512 538 2.85E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 SMART SM00491 619 744 3.0E-8 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM474_RS28625 ce1fc30f25a8a9e6c5e201c99e702a26 758 Pfam PF06733 DEAD_2 278 396 3.1E-11 T 29-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-29 T 29-03-2018 AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 SUPERFAMILY SSF52788 5 132 3.14E-31 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 6.4E-5 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 6.4E-5 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 6.4E-5 T 29-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 131 1.6E-20 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS09325 cc6d45ad6293c2951cc454ede4298ae2 142 SMART SM00226 5 133 7.4E-24 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 Gene3D G3DSA:3.40.190.10 178 263 2.5E-18 T 29-03-2018 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 SUPERFAMILY SSF46785 3 109 5.26E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 SUPERFAMILY SSF53850 90 292 5.02E-41 T 29-03-2018 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 Pfam PF03466 LysR substrate binding domain 88 284 1.9E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 Gene3D G3DSA:1.10.10.10 1 83 1.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 Gene3D G3DSA:3.40.190.10 89 177 1.5E-19 T 29-03-2018 AM474_RS29585 f6a3c7f06a4c463f355c95cf11d677a4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.5E-25 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:3.50.50.60 2 110 7.5E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:3.50.50.60 111 147 0.015 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 311 2.2E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 Gene3D G3DSA:3.50.50.60 148 332 1.8E-11 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.8E-10 T 29-03-2018 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.8E-10 T 29-03-2018 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 273 1.8E-10 T 29-03-2018 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-10 T 29-03-2018 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 PIRSF PIRSF037495 1 464 1.9E-137 T 29-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 424 7.8E-12 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS30295 96c3067d23136e03a0dc9211309f3f8f 464 SUPERFAMILY SSF51905 6 330 6.42E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 Gene3D G3DSA:1.10.10.10 5 97 1.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 SUPERFAMILY SSF53850 97 301 8.14E-31 T 29-03-2018 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 4.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 Pfam PF03466 LysR substrate binding domain 102 294 4.5E-18 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 SUPERFAMILY SSF46785 11 93 5.22E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26050 ec978b908ab17f4f050431b0b27d48c3 306 Gene3D G3DSA:3.40.190.10 98 306 1.3E-16 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 SUPERFAMILY SSF51905 2 167 1.07E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 SUPERFAMILY SSF51905 208 331 1.07E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 3.2E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 374 389 2.9E-6 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.9E-6 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 2.9E-6 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.9E-6 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 Gene3D G3DSA:3.40.50.720 165 374 1.5E-26 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 Gene3D G3DSA:3.50.50.60 1 164 4.7E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 6.7E-9 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 6.7E-9 T 29-03-2018 AM474_RS01305 8e20aa58c2209666cf88cda767c2ed25 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.7E-9 T 29-03-2018 AM474_RS22115 45b3b6f57a1762bd108c7362f659f41b 197 Pfam PF04612 Type II secretion system (T2SS), protein M 24 190 2.9E-47 T 29-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 AM474_RS22115 45b3b6f57a1762bd108c7362f659f41b 197 Gene3D G3DSA:3.30.1360.100 102 188 2.9E-12 T 29-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 Gene3D G3DSA:3.40.50.720 52 254 1.9E-54 T 29-03-2018 AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 Gene3D G3DSA:3.40.50.720 6 51 1.9E-10 T 29-03-2018 AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 249 8.4E-55 T 29-03-2018 AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 SUPERFAMILY SSF51735 12 250 2.06E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30450 a8dbd0bdb0499e15def114256040bdac 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.3E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS15890 86aad7dca18f127a73b10c502bbf68fd 279 Gene3D G3DSA:1.10.3720.10 16 273 3.3E-32 T 29-03-2018 AM474_RS15890 86aad7dca18f127a73b10c502bbf68fd 279 SUPERFAMILY SSF161098 87 271 5.89E-39 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS15890 86aad7dca18f127a73b10c502bbf68fd 279 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 5 271 3.2E-126 T 29-03-2018 IPR017784 ABC transporter, choline, permease protein AM474_RS15890 86aad7dca18f127a73b10c502bbf68fd 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 267 9.9E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.2300 1 129 2.0E-28 T 29-03-2018 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00158 Sigma-54 interaction domain 149 315 3.0E-73 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00448 2 109 6.2E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52540 148 390 1.74E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:3.40.50.300 145 321 4.7E-30 T 29-03-2018 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:1.10.10.10 451 476 0.0017 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 SMART SM00382 169 334 7.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 SUPERFAMILY SSF52172 1 194 3.98E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:1.10.10.10 380 450 0.014 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Gene3D G3DSA:1.10.8.60 322 379 8.8E-22 T 29-03-2018 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 Pfam PF00072 Response regulator receiver domain 4 109 2.1E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS19625 ebd2e127f05389986b8dc2c6108cb362 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.5E-21 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF82051 2 158 2.62E-57 T 29-03-2018 IPR006169 GTP1/OBG domain AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:3.40.50.300 156 392 4.5E-29 T 29-03-2018 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 PIRSF PIRSF002401 1 378 1.6E-136 T 29-03-2018 IPR035101 GTP-binding protein, Obg-type AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 4.8E-145 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 29-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 SUPERFAMILY SSF52540 151 339 7.25E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.0E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.0E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.0E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.0E-33 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 Pfam PF01018 GTP1/OBG 4 158 2.8E-60 T 29-03-2018 IPR006169 GTP1/OBG domain AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.483 T 29-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM474_RS20515 3250e70161daaf149ca278e456bf69e0 406 Gene3D G3DSA:2.70.210.12 2 155 4.5E-58 T 29-03-2018 IPR006169 GTP1/OBG domain AM474_RS18300 259cf6aa77b6f80b2c9a2c02ab28d1d5 234 SUPERFAMILY SSF52218 1 227 2.44E-69 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS18300 259cf6aa77b6f80b2c9a2c02ab28d1d5 234 Gene3D G3DSA:3.40.50.360 1 233 3.7E-57 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS18300 259cf6aa77b6f80b2c9a2c02ab28d1d5 234 Pfam PF02525 Flavodoxin-like fold 1 207 4.3E-54 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS03735 4b78f5df730c93f1fd628929453c41c1 189 Pfam PF02659 Putative manganese efflux pump 31 182 1.0E-52 T 29-03-2018 IPR003810 Putative manganese efflux pump AM474_RS03735 4b78f5df730c93f1fd628929453c41c1 189 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 2 185 24.996 T 29-03-2018 IPR022929 Putative manganese efflux pump MntP AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 Pfam PF00108 Thiolase, N-terminal domain 5 265 2.3E-61 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 3.8E-121 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 PIRSF PIRSF000429 1 401 4.9E-122 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 Gene3D G3DSA:3.40.47.10 1 273 1.5E-46 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 Gene3D G3DSA:3.40.47.10 274 397 6.8E-33 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 SUPERFAMILY SSF53901 276 399 1.43E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.4E-42 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS07295 d236697fd219d4415d1a46b274b15341 401 SUPERFAMILY SSF53901 3 274 6.26E-66 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 224 1.3E-15 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 SMART SM00419 171 219 3.2E-14 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 SUPERFAMILY SSF46785 150 224 2.05E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 SUPERFAMILY SSF51206 9 150 4.45E-32 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 Pfam PF00027 Cyclic nucleotide-binding domain 35 122 6.3E-18 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 Gene3D G3DSA:1.10.10.10 155 227 3.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 Gene3D G3DSA:2.60.120.10 5 154 3.7E-28 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS12055 cd4a827757d5b97998eb534b065670de 227 SMART SM00100 16 135 2.9E-25 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 359 370 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF142019 26 253 4.84E-86 T 29-03-2018 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF140490 343 436 1.23E-29 T 29-03-2018 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 SMART SM00928 346 391 2.8E-21 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 29-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 2.6E-24 T 29-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 433 1.4E-196 T 29-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 SUPERFAMILY SSF142984 258 341 8.89E-19 T 29-03-2018 AM474_RS01050 23587dd3b3c1664be6fb9c625a979a24 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 234 1.3E-51 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 620 638 - T 29-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.20.20.60 429 746 1.1E-91 T 29-03-2018 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 736 1.1E-141 T 29-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 327 399 2.8E-16 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 426 713 1.9E-98 T 29-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.30.450.40 1 164 8.6E-32 T 29-03-2018 IPR029016 GAF domain-like AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF52009 300 420 6.93E-29 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF55781 2 158 2.4E-32 T 29-03-2018 IPR029016 GAF domain-like AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF51621 427 715 1.05E-102 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 180 301 2.7E-27 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:3.50.30.10 312 428 7.5E-20 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 620 635 5.9E-24 T 29-03-2018 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 673 685 5.9E-24 T 29-03-2018 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 486 5.9E-24 T 29-03-2018 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 5.9E-24 T 29-03-2018 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 SUPERFAMILY SSF47831 204 316 7.45E-30 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Gene3D G3DSA:1.10.274.10 204 311 3.3E-31 T 29-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 SMART SM00065 17 164 4.5E-23 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS13035 1e583f1950c01f486bbd5fbcf353da35 759 Pfam PF01590 GAF domain 17 152 3.3E-15 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS15060 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF109635 1 92 3.92E-24 T 29-03-2018 AM474_RS15060 a7ccff6bd3f54687dda5acd52fa7f0f0 134 SUPERFAMILY SSF57716 93 131 2.71E-9 T 29-03-2018 AM474_RS15060 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 126 4.2E-11 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS15060 a7ccff6bd3f54687dda5acd52fa7f0f0 134 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 11 132 27.461 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM474_RS15060 a7ccff6bd3f54687dda5acd52fa7f0f0 134 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 15 123 4.5E-40 T 29-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AM474_RS18175 8a93d26c941bc7d3539767de739762d6 401 Pfam PF04932 O-Antigen ligase 198 322 6.5E-11 T 29-03-2018 IPR007016 O-antigen ligase-related AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Gene3D G3DSA:1.10.1040.10 186 289 8.1E-30 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Gene3D G3DSA:1.10.1040.10 412 504 1.0E-18 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 SUPERFAMILY SSF48179 413 497 6.97E-21 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Gene3D G3DSA:3.40.50.720 2 185 2.8E-49 T 29-03-2018 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 284 4.2E-31 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 414 497 2.7E-22 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 2.7E-57 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 SUPERFAMILY SSF48179 186 290 3.74E-31 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27315 3b3ab868fd44aa648264c575ab8d3059 509 SUPERFAMILY SSF51735 2 186 2.68E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 PRINTS PR01217 Proline rich extensin signature 99 124 9.3E-10 T 29-03-2018 AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 PRINTS PR01217 Proline rich extensin signature 11 23 9.3E-10 T 29-03-2018 AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 PRINTS PR01217 Proline rich extensin signature 59 75 9.3E-10 T 29-03-2018 AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 PRINTS PR01217 Proline rich extensin signature 36 57 9.3E-10 T 29-03-2018 AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 PRINTS PR01217 Proline rich extensin signature 80 97 9.3E-10 T 29-03-2018 AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 Pfam PF02120 Flagellar hook-length control protein FliK 289 371 3.5E-9 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AM474_RS27695 783ad27a9adf9e0444e5739082c48d1c 386 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 257 386 1.2E-46 T 29-03-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 218 1.0E-76 T 29-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 Pfam PF01144 Coenzyme A transferase 11 218 5.9E-78 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 29-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 Gene3D G3DSA:3.40.1080.10 1 232 8.7E-99 T 29-03-2018 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 SMART SM00882 8 219 8.0E-92 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS29310 1d2a035d6cd13d55e87f564b6696fe88 232 SUPERFAMILY SSF100950 5 226 7.85E-89 T 29-03-2018 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 Pfam PF01566 Natural resistance-associated macrophage protein 52 409 8.8E-128 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 23 436 40.374 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 404 5.1E-115 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 164 185 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 320 339 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 111 137 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 380 399 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 348 365 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 139 158 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22700 652b56ceb698a0dbe90ea1e80d6c8d46 438 PRINTS PR00447 Natural resistance-associated macrophage protein signature 216 239 7.7E-60 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS05475 710daf3d73a9d4e352e43b71d1e76c1b 267 PRINTS PR01805 VacJ lipoprotein signature 174 191 2.4E-24 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS05475 710daf3d73a9d4e352e43b71d1e76c1b 267 PRINTS PR01805 VacJ lipoprotein signature 70 83 2.4E-24 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS05475 710daf3d73a9d4e352e43b71d1e76c1b 267 PRINTS PR01805 VacJ lipoprotein signature 87 103 2.4E-24 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS05475 710daf3d73a9d4e352e43b71d1e76c1b 267 PRINTS PR01805 VacJ lipoprotein signature 138 155 2.4E-24 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS05475 710daf3d73a9d4e352e43b71d1e76c1b 267 Pfam PF04333 MlaA lipoprotein 69 262 5.0E-67 T 29-03-2018 IPR007428 MlaA lipoprotein GO:0016020 AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 40 53 4.4E-9 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 8 21 4.4E-9 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 25 39 4.4E-9 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 Gene3D G3DSA:2.40.50.100 2 80 1.0E-12 T 29-03-2018 AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 SUPERFAMILY SSF51230 5 78 3.66E-18 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS12220 4d3e4bdcede3d43838fc175077643249 82 Pfam PF00364 Biotin-requiring enzyme 5 78 1.4E-14 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS29505 82d7fd30e52ff67a532a36b5618f2cfd 252 Pfam PF03591 AzlC protein 36 173 3.4E-36 T 29-03-2018 IPR011606 Branched-chain amino acid transport, permease AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 Pfam PF01223 DNA/RNA non-specific endonuclease 390 603 4.0E-51 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 SMART SM00477 397 604 1.4E-14 T 29-03-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 SUPERFAMILY SSF54060 387 601 2.0E-45 T 29-03-2018 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 Gene3D G3DSA:3.40.570.10 348 608 5.7E-46 T 29-03-2018 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 SUPERFAMILY SSF50494 107 330 1.01E-24 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 SMART SM00892 396 604 4.5E-57 T 29-03-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 Gene3D G3DSA:2.40.10.10 99 234 2.3E-6 T 29-03-2018 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 PRINTS PR00839 V8 serine protease family signature 282 298 9.4E-11 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 PRINTS PR00839 V8 serine protease family signature 134 151 9.4E-11 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 PRINTS PR00839 V8 serine protease family signature 300 312 9.4E-11 T 29-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 Pfam PF13365 Trypsin-like peptidase domain 134 308 2.0E-17 T 29-03-2018 AM474_RS25705 24dd315e8d3e64a3098d6d695db55b28 642 Gene3D G3DSA:2.40.10.10 235 334 5.0E-13 T 29-03-2018 AM474_RS12085 b09b1d895fa740de2e0d55a53c174c89 175 Pfam PF00510 Cytochrome c oxidase subunit III 40 173 2.1E-18 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS12085 b09b1d895fa740de2e0d55a53c174c89 175 Gene3D G3DSA:1.20.120.80 1 175 6.0E-45 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS12085 b09b1d895fa740de2e0d55a53c174c89 175 SUPERFAMILY SSF81452 1 174 4.06E-46 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS20355 74ccab1bb124f021161b67f6b454e0aa 172 Gene3D G3DSA:1.10.10.60 2 32 1.1E-5 T 29-03-2018 AM474_RS20355 74ccab1bb124f021161b67f6b454e0aa 172 Gene3D G3DSA:1.10.357.10 33 167 5.4E-9 T 29-03-2018 AM474_RS20355 74ccab1bb124f021161b67f6b454e0aa 172 SUPERFAMILY SSF46689 6 62 1.33E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS20355 74ccab1bb124f021161b67f6b454e0aa 172 SUPERFAMILY SSF48498 63 141 5.76E-9 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 Gene3D G3DSA:3.30.70.1230 276 486 2.4E-12 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 Gene3D G3DSA:3.30.70.1230 45 256 2.4E-12 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 SUPERFAMILY SSF55073 47 209 1.27E-18 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 SUPERFAMILY SSF55073 279 448 5.81E-15 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 51 227 6.2E-6 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS09570 d39244862447c830afdd7a9d4e12d775 514 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 283 421 4.7E-5 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52467 187 308 1.45E-48 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 PIRSF PIRSF000089 1 309 2.7E-106 T 29-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 7.0E-37 T 29-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.620 1 183 3.9E-43 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 SMART SM00893 3 182 2.8E-55 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 Pfam PF01012 Electron transfer flavoprotein domain 4 169 2.3E-39 T 29-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 Gene3D G3DSA:3.40.50.1220 185 309 1.6E-60 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 29-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 AM474_RS03955 2bc4dcec2dafa431f0e2d3394902314f 309 SUPERFAMILY SSF52402 3 184 1.34E-56 T 29-03-2018 AM474_RS26960 ca75bfba21ba7e822858af72eb602804 385 Gene3D G3DSA:3.40.50.720 13 373 1.7E-32 T 29-03-2018 AM474_RS26960 ca75bfba21ba7e822858af72eb602804 385 Pfam PF07993 Male sterility protein 21 253 4.3E-30 T 29-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 AM474_RS26960 ca75bfba21ba7e822858af72eb602804 385 SUPERFAMILY SSF51735 334 364 5.23E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26960 ca75bfba21ba7e822858af72eb602804 385 SUPERFAMILY SSF51735 17 304 5.23E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 Pfam PF09339 IclR helix-turn-helix domain 6 55 4.8E-17 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 SUPERFAMILY SSF46785 6 76 1.6E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 Pfam PF01614 Bacterial transcriptional regulator 124 250 9.7E-19 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 SUPERFAMILY SSF55781 70 251 1.63E-38 T 29-03-2018 IPR029016 GAF domain-like AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 SMART SM00346 2 93 6.7E-20 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 Gene3D G3DSA:1.10.10.10 2 72 4.7E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13605 693e13e03d8b8a6377dafe0ec5c224d4 259 Gene3D G3DSA:3.30.450.40 73 256 3.9E-40 T 29-03-2018 IPR029016 GAF domain-like AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Gene3D G3DSA:3.40.50.970 442 619 1.5E-29 T 29-03-2018 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Gene3D G3DSA:3.40.50.970 15 275 2.1E-21 T 29-03-2018 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Gene3D G3DSA:3.40.920.10 722 946 1.2E-47 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 458 543 1.1E-6 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 731 931 8.3E-27 T 29-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 Gene3D G3DSA:3.40.50.920 276 401 8.4E-11 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 SUPERFAMILY SSF52518 438 622 6.48E-14 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 SUPERFAMILY SSF52922 268 397 5.49E-8 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 SUPERFAMILY SSF52518 18 227 1.53E-17 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS00635 4438cb038800e8401c3d54f80003aaa9 1185 SUPERFAMILY SSF53323 722 982 1.44E-30 T 29-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AM474_RS20145 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 32 50 1.4E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS20145 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 59 81 1.4E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS20145 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 13 32 1.4E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS20145 0982c3fa320b4deb51c49e142c3fe78c 234 PRINTS PR01837 MgtC/SapB protein signature 86 110 1.4E-43 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS20145 0982c3fa320b4deb51c49e142c3fe78c 234 Pfam PF02308 MgtC family 11 131 5.2E-35 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 SUPERFAMILY SSF53383 929 952 3.6E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 SUPERFAMILY SSF53383 477 887 3.6E-107 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Gene3D G3DSA:3.40.640.10 100 346 3.4E-32 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Gene3D G3DSA:3.90.1150.10 347 448 1.1E-24 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Pfam PF02347 Glycine cleavage system P-protein 21 444 5.0E-181 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Pfam PF02347 Glycine cleavage system P-protein 464 743 2.9E-10 T 29-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 21 950 0.0 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 SUPERFAMILY SSF53383 21 446 3.88E-99 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Gene3D G3DSA:3.90.1150.10 773 904 3.7E-48 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 12 956 26.247 T 29-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AM474_RS31830 988f4e85c683699ee8aa8ae1f3f53d8f 959 Gene3D G3DSA:3.40.640.10 521 772 1.5E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 311 7.3E-114 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 312 39.457 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 Gene3D G3DSA:3.40.50.150 180 313 4.1E-19 T 29-03-2018 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 Gene3D G3DSA:3.40.50.150 7 179 1.1E-20 T 29-03-2018 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 SUPERFAMILY SSF53335 7 115 2.79E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 SUPERFAMILY SSF53335 215 312 2.79E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 SUPERFAMILY SSF81799 116 215 1.44E-34 T 29-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 PIRSF PIRSF004486 1 313 6.8E-103 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS21290 ca63088540041b60a0e89e6a93a0ce67 313 Pfam PF01795 MraW methylase family 5 311 5.9E-111 T 29-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS00600 3fa91d5219068fdb865ef69c470afde1 416 Gene3D G3DSA:1.20.1250.20 5 211 3.3E-23 T 29-03-2018 AM474_RS00600 3fa91d5219068fdb865ef69c470afde1 416 SUPERFAMILY SSF103473 7 403 1.19E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00600 3fa91d5219068fdb865ef69c470afde1 416 Pfam PF07690 Major Facilitator Superfamily 30 308 1.3E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00600 3fa91d5219068fdb865ef69c470afde1 416 Gene3D G3DSA:1.20.1250.20 214 414 1.2E-25 T 29-03-2018 AM474_RS25865 1bede523fe05c5c9b38a1bb138b414ef 132 PIRSF PIRSF500687 1 132 3.2E-64 T 29-03-2018 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial AM474_RS25865 1bede523fe05c5c9b38a1bb138b414ef 132 Gene3D G3DSA:3.10.180.10 1 132 1.2E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS25865 1bede523fe05c5c9b38a1bb138b414ef 132 PIRSF PIRSF021700 1 132 3.1E-42 T 29-03-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AM474_RS25865 1bede523fe05c5c9b38a1bb138b414ef 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 129 1.6E-32 T 29-03-2018 IPR028973 PhnB-like AM474_RS25865 1bede523fe05c5c9b38a1bb138b414ef 132 SUPERFAMILY SSF54593 3 130 5.63E-40 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS28905 03aee3de7460c593f34ba3b03374cf0f 232 Gene3D G3DSA:3.20.20.70 20 232 6.7E-18 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS28905 03aee3de7460c593f34ba3b03374cf0f 232 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 7 194 1.7E-71 T 29-03-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein AM474_RS28905 03aee3de7460c593f34ba3b03374cf0f 232 Pfam PF13353 4Fe-4S single cluster domain 19 95 9.9E-9 T 29-03-2018 AM474_RS28905 03aee3de7460c593f34ba3b03374cf0f 232 Pfam PF04055 Radical SAM superfamily 27 157 1.0E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS28905 03aee3de7460c593f34ba3b03374cf0f 232 SUPERFAMILY SSF102114 18 196 2.09E-20 T 29-03-2018 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 Gene3D G3DSA:2.40.50.140 15 151 6.7E-31 T 29-03-2018 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 500 43.686 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 Pfam PF01336 OB-fold nucleic acid binding domain 69 142 2.9E-7 T 29-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 Gene3D G3DSA:3.30.930.10 152 497 1.2E-104 T 29-03-2018 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 SUPERFAMILY SSF50249 13 151 1.05E-35 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 SUPERFAMILY SSF55681 158 498 2.03E-123 T 29-03-2018 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 497 1.6E-83 T 29-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 1.6E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 1.6E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 1.6E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 1.6E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 382 398 1.6E-37 T 29-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS07860 f8a577d85a5d5041c12b69487373d156 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 500 2.6E-202 T 29-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 AM474_RS15900 d4c00a3ae43a2a7c514863526b2a50d1 516 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 493 2.5E-169 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS15900 d4c00a3ae43a2a7c514863526b2a50d1 516 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 39 494 2.6E-149 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12833 Helix-turn-helix domain 261 337 6.3E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 211 2.0E-40 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 Gene3D G3DSA:1.10.10.60 287 338 1.1E-11 T 29-03-2018 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 SMART SM00342 254 336 3.6E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 1.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 1.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 SUPERFAMILY SSF46689 289 337 4.18E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22815 faf70e1d522bf27ebfbde00aaf833cd7 339 Gene3D G3DSA:1.10.10.60 234 286 0.023 T 29-03-2018 AM474_RS16720 b4f445676af8498b3b6b7ec26806af50 160 Gene3D G3DSA:3.10.129.10 3 153 2.5E-21 T 29-03-2018 AM474_RS16720 b4f445676af8498b3b6b7ec26806af50 160 SUPERFAMILY SSF54637 11 151 3.69E-25 T 29-03-2018 IPR029069 HotDog domain AM474_RS16720 b4f445676af8498b3b6b7ec26806af50 160 Pfam PF14539 Domain of unknown function (DUF4442) 9 150 2.3E-30 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 Gene3D G3DSA:1.10.260.40 2 77 1.7E-14 T 29-03-2018 AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 Pfam PF07883 Cupin domain 115 183 5.6E-15 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 SUPERFAMILY SSF51182 55 182 1.89E-25 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 Gene3D G3DSA:2.60.120.10 78 184 1.3E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 SUPERFAMILY SSF47413 8 74 5.07E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 Pfam PF01381 Helix-turn-helix 15 69 1.3E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS12005 800de3683b86908bf9fb57c3fd03a099 184 SMART SM00530 14 69 4.4E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82714 183 264 3.53E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 267 323 6.28E-24 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 137 181 6.28E-24 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1320 138 197 0.016 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 553 650 4.45E-23 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82714 699 781 7.06E-17 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 42 132 4.45E-20 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 2.1E-75 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.2090.10 698 784 2.2E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.2090.10 198 265 8.9E-12 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1430 555 650 1.1E-10 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82866 290 490 3.4E-53 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1002 9.0E-274 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82866 808 1003 4.19E-44 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:1.20.1640.10 280 497 1.7E-50 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:1.20.1640.10 785 1005 1.0E-40 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 650 698 1.88E-15 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 SUPERFAMILY SSF82693 785 832 1.88E-15 T 29-03-2018 AM474_RS21525 c41252ad33813707fe15100bbc554ca7 1018 Gene3D G3DSA:3.30.70.1430 41 137 3.3E-22 T 29-03-2018 AM474_RS12010 8ffaa4073452f126cec740121a13ad2c 392 Pfam PF01266 FAD dependent oxidoreductase 11 348 4.4E-46 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS12010 8ffaa4073452f126cec740121a13ad2c 392 SUPERFAMILY SSF51905 16 298 1.63E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12010 8ffaa4073452f126cec740121a13ad2c 392 Gene3D G3DSA:3.50.50.60 12 371 2.4E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 SUPERFAMILY SSF53383 11 449 3.81E-129 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 Gene3D G3DSA:3.40.640.10 101 327 2.3E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 Gene3D G3DSA:3.90.1150.10 328 455 5.6E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 Pfam PF00202 Aminotransferase class-III 37 446 2.9E-94 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 Gene3D G3DSA:3.90.1150.10 2 100 4.5E-10 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 PIRSF PIRSF000521 35 154 3.8E-9 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13250 18e0fb5865e5494a89f492e35f76000c 456 PIRSF PIRSF000521 143 450 6.2E-21 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 Gene3D G3DSA:3.40.50.720 11 277 3.3E-58 T 29-03-2018 AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 SUPERFAMILY SSF51735 236 289 5.53E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 SUPERFAMILY SSF51735 8 204 5.53E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 Pfam PF00106 short chain dehydrogenase 14 204 4.7E-44 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.1E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.1E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.1E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.1E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS05985 07834a806cb01a2fe31c7265bddbde51 304 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.1E-16 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09080 a9c06c2a6681eeb061e036b42421fdcb 246 Gene3D G3DSA:1.10.3480.10 30 201 9.7E-28 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM474_RS09080 a9c06c2a6681eeb061e036b42421fdcb 246 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 13 164 3.6E-35 T 29-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AM474_RS09080 a9c06c2a6681eeb061e036b42421fdcb 246 Pfam PF02613 Nitrate reductase delta subunit 39 161 3.6E-11 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM474_RS09080 a9c06c2a6681eeb061e036b42421fdcb 246 SUPERFAMILY SSF89155 6 166 6.41E-30 T 29-03-2018 IPR020945 DMSO/Nitrate reductase chaperone AM474_RS29040 20ec664eadfd8f5bfd5da9be408ec112 319 SUPERFAMILY SSF53822 24 318 4.08E-77 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS29040 20ec664eadfd8f5bfd5da9be408ec112 319 Gene3D G3DSA:3.40.50.2300 155 318 2.6E-40 T 29-03-2018 AM474_RS29040 20ec664eadfd8f5bfd5da9be408ec112 319 Pfam PF13407 Periplasmic binding protein domain 37 299 6.8E-56 T 29-03-2018 IPR025997 Periplasmic binding protein AM474_RS29040 20ec664eadfd8f5bfd5da9be408ec112 319 Gene3D G3DSA:3.40.50.2300 33 154 1.1E-21 T 29-03-2018 AM474_RS13000 23106d38bb2e69bae75e43d51379ef8a 459 Pfam PF11981 Domain of unknown function (DUF3482) 165 450 2.1E-109 T 29-03-2018 IPR021871 Protein of unknown function DUF3482 AM474_RS13000 23106d38bb2e69bae75e43d51379ef8a 459 Pfam PF01926 50S ribosome-binding GTPase 8 152 1.0E-15 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS13000 23106d38bb2e69bae75e43d51379ef8a 459 Gene3D G3DSA:3.40.50.300 2 456 2.2E-24 T 29-03-2018 AM474_RS13000 23106d38bb2e69bae75e43d51379ef8a 459 SUPERFAMILY SSF52540 4 159 9.62E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82693 38 130 3.14E-24 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82693 564 667 1.2E-24 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82866 295 497 8.76E-50 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1032 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:3.30.70.1440 669 765 2.7E-17 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:3.30.2090.10 179 274 1.1E-15 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:1.20.1640.10 285 509 2.8E-46 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.2E-105 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:3.30.70.1430 38 139 4.8E-25 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:1.20.1640.10 822 1026 1.5E-36 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82714 719 802 1.83E-19 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82866 804 1025 1.01E-44 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 Gene3D G3DSA:3.30.70.1430 566 665 2.0E-18 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82693 273 329 1.36E-25 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82693 135 181 1.36E-25 T 29-03-2018 AM474_RS29410 174c97f2ca1373aa0db2f6052124fbc9 1045 SUPERFAMILY SSF82714 181 270 4.58E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS22065 c919efc3bdbc4ebd1fc18979b837218d 238 Pfam PF13103 TonB C terminal 136 198 4.1E-5 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS22065 c919efc3bdbc4ebd1fc18979b837218d 238 SUPERFAMILY SSF74653 126 210 3.14E-10 T 29-03-2018 AM474_RS22065 c919efc3bdbc4ebd1fc18979b837218d 238 Gene3D G3DSA:3.30.1150.10 126 216 6.8E-6 T 29-03-2018 AM474_RS22065 c919efc3bdbc4ebd1fc18979b837218d 238 SMART SM00965 63 114 1.1E-10 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 11 459 1.5E-178 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 SMART SM00388 243 309 9.6E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 SUPERFAMILY SSF55874 298 455 6.29E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 Gene3D G3DSA:3.30.565.10 304 460 3.7E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 Gene3D G3DSA:1.10.287.130 233 303 2.2E-13 T 29-03-2018 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 457 1.8E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 SMART SM00304 189 242 2.2E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.4E-7 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 2.3E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 SMART SM00387 352 463 2.1E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS26310 5d8107c4889b8fece5a7aaa881ef17af 481 SUPERFAMILY SSF47384 226 310 1.96E-18 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 5.6E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.3E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.10.60 2 76 2.0E-18 T 29-03-2018 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 Pfam PF08362 YcdC-like protein, C-terminal region 75 216 1.7E-53 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF48498 92 216 2.19E-43 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 SUPERFAMILY SSF46689 16 95 6.67E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS13935 fde57cadd89d3e454ad76cbdc711b4d7 221 Gene3D G3DSA:1.10.357.10 77 216 1.5E-25 T 29-03-2018 AM474_RS09335 a970ce70b3b07eafa522dd6321f87d43 258 SMART SM00880 10 251 3.1E-42 T 29-03-2018 IPR007899 CHAD domain AM474_RS09335 a970ce70b3b07eafa522dd6321f87d43 258 Pfam PF05235 CHAD domain 23 212 9.9E-28 T 29-03-2018 IPR007899 CHAD domain AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:2.60.120.10 5 248 7.4E-28 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 Pfam PF12833 Helix-turn-helix domain 211 289 4.6E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 241 289 3.37E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 8.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 8.3E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 Gene3D G3DSA:1.10.10.60 249 300 1.3E-11 T 29-03-2018 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 SMART SM00342 205 288 1.3E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31275 b3796686441ea8107594b8596ff04f3b 301 SUPERFAMILY SSF46689 188 239 1.43E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25345 c3cabccdaa6e7ea23b770c2845537b56 221 SUPERFAMILY SSF161098 17 204 4.19E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25345 c3cabccdaa6e7ea23b770c2845537b56 221 Gene3D G3DSA:1.10.3720.10 1 221 4.2E-37 T 29-03-2018 AM474_RS25345 c3cabccdaa6e7ea23b770c2845537b56 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 210 1.9E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25345 c3cabccdaa6e7ea23b770c2845537b56 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 1.6E-26 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS18070 17ffc402111c0cb6b33ceba7f4269970 215 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 49 210 36.888 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM474_RS18070 17ffc402111c0cb6b33ceba7f4269970 215 Pfam PF01625 Peptide methionine sulfoxide reductase 52 204 3.5E-64 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM474_RS18070 17ffc402111c0cb6b33ceba7f4269970 215 SUPERFAMILY SSF55068 10 213 1.44E-79 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM474_RS18070 17ffc402111c0cb6b33ceba7f4269970 215 Gene3D G3DSA:3.30.1060.10 31 209 9.5E-76 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM474_RS18070 17ffc402111c0cb6b33ceba7f4269970 215 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 51 204 3.8E-65 T 29-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AM474_RS13260 7784db45bb1394634388d92bef2cd011 250 Gene3D G3DSA:3.40.50.880 14 250 4.2E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS13260 7784db45bb1394634388d92bef2cd011 250 Pfam PF07722 Peptidase C26 5 223 6.6E-77 T 29-03-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AM474_RS13260 7784db45bb1394634388d92bef2cd011 250 SUPERFAMILY SSF52317 4 246 1.92E-39 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 539 2.8E-281 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF51905 1 295 1.23E-88 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF51905 478 537 1.23E-88 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 PIRSF PIRSF000137 1 540 6.2E-136 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 Gene3D G3DSA:4.10.450.10 40 104 5.7E-24 T 29-03-2018 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 SUPERFAMILY SSF54373 297 479 3.24E-64 T 29-03-2018 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 64.937 T 29-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 Pfam PF00732 GMC oxidoreductase 5 302 1.1E-95 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 Pfam PF05199 GMC oxidoreductase 395 529 6.3E-42 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS15920 b9e94aa14de7fe593c4fb92d96d502c6 561 Gene3D G3DSA:3.30.560.10 105 492 8.9E-100 T 29-03-2018 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 Pfam PF08281 Sigma-70, region 4 109 161 1.2E-13 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 SUPERFAMILY SSF88659 92 170 1.61E-11 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 Pfam PF04542 Sigma-70 region 2 17 73 2.5E-4 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 159 5.5E-18 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 Gene3D G3DSA:1.10.10.10 95 171 3.4E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 Gene3D G3DSA:1.10.1740.10 1 79 1.1E-8 T 29-03-2018 AM474_RS22070 d75cc267031b0d99454994de0d85c50d 181 SUPERFAMILY SSF88946 2 72 7.06E-9 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22660 e44ce0fbea57e31085ddf50ebe959949 506 Pfam PF03929 PepSY-associated TM region 10 356 3.5E-59 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 Gene3D G3DSA:1.20.1250.20 234 431 1.4E-24 T 29-03-2018 AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 Pfam PF00083 Sugar (and other) transporter 16 211 2.5E-20 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 Pfam PF07690 Major Facilitator Superfamily 247 430 1.8E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 SUPERFAMILY SSF103473 11 419 1.18E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS21690 f8733a1968a49277d869592a4e4a0c43 439 Gene3D G3DSA:1.20.1250.20 8 225 3.7E-22 T 29-03-2018 AM474_RS18245 10558327ce0ccfc6e51c219afbcf8486 363 Gene3D G3DSA:3.40.190.10 161 316 5.2E-28 T 29-03-2018 AM474_RS18245 10558327ce0ccfc6e51c219afbcf8486 363 SUPERFAMILY SSF53850 44 360 3.59E-59 T 29-03-2018 AM474_RS18245 10558327ce0ccfc6e51c219afbcf8486 363 Gene3D G3DSA:3.40.190.10 41 160 3.2E-11 T 29-03-2018 AM474_RS18245 10558327ce0ccfc6e51c219afbcf8486 363 Pfam PF13416 Bacterial extracellular solute-binding protein 63 327 9.9E-41 T 29-03-2018 AM474_RS00495 779a59279c7132c566fbced938d8601c 417 Gene3D G3DSA:1.20.1250.20 9 207 8.7E-26 T 29-03-2018 AM474_RS00495 779a59279c7132c566fbced938d8601c 417 Pfam PF07690 Major Facilitator Superfamily 27 357 2.2E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00495 779a59279c7132c566fbced938d8601c 417 Gene3D G3DSA:1.20.1250.20 212 410 4.7E-14 T 29-03-2018 AM474_RS00495 779a59279c7132c566fbced938d8601c 417 SUPERFAMILY SSF103473 15 404 1.29E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00495 779a59279c7132c566fbced938d8601c 417 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 22 385 8.0E-70 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM474_RS10830 5da017a561668df74638cff1022318e3 214 Pfam PF00072 Response regulator receiver domain 9 118 1.5E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10830 5da017a561668df74638cff1022318e3 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 199 3.7E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 SMART SM00448 7 118 3.5E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10830 5da017a561668df74638cff1022318e3 214 Gene3D G3DSA:1.10.10.10 133 205 2.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10830 5da017a561668df74638cff1022318e3 214 SUPERFAMILY SSF46894 132 206 2.82E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 Gene3D G3DSA:3.40.50.2300 2 132 2.6E-29 T 29-03-2018 AM474_RS10830 5da017a561668df74638cff1022318e3 214 SMART SM00421 142 199 5.5E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 SUPERFAMILY SSF52172 9 156 1.1E-33 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS10830 5da017a561668df74638cff1022318e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 4.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 4.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10830 5da017a561668df74638cff1022318e3 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 4.2E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS23095 61d517cb04fc31700c31a4db976fe97f 275 PIRSF PIRSF015582 1 275 2.1E-72 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like AM474_RS23095 61d517cb04fc31700c31a4db976fe97f 275 SUPERFAMILY SSF51621 4 227 7.68E-58 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS23095 61d517cb04fc31700c31a4db976fe97f 275 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 215 1.0E-28 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM474_RS23095 61d517cb04fc31700c31a4db976fe97f 275 Gene3D G3DSA:3.20.20.360 1 249 4.7E-45 T 29-03-2018 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 SMART SM00965 65 116 2.4E-12 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 267 3.5E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 Gene3D G3DSA:2.170.130.10 124 273 9.0E-29 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 Pfam PF07660 Secretin and TonB N terminus short domain 67 115 1.5E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 Gene3D G3DSA:2.40.170.20 274 883 1.2E-63 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 Pfam PF00593 TonB dependent receptor 383 881 3.3E-44 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS29780 294667c64e9a36e20d50083c80cd7a18 883 SUPERFAMILY SSF56935 134 883 4.58E-99 T 29-03-2018 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 Pfam PF00255 Glutathione peroxidase 8 112 6.8E-40 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 29-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 PIRSF PIRSF000303 1 161 4.1E-64 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 Gene3D G3DSA:3.40.30.10 5 161 1.4E-46 T 29-03-2018 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 SUPERFAMILY SSF52833 5 160 2.05E-60 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.7E-20 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.7E-20 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS03310 6418c0f43374c5dd3d8c5df23126d87f 161 PRINTS PR01011 Glutathione peroxidase family signature 124 133 2.7E-20 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 21 511 3.6E-118 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS17420 ff076c8657097294a210aad77335cb44 790 Pfam PF05954 Phage late control gene D protein (GPD) 29 327 4.9E-80 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 Gene3D G3DSA:3.55.50.10 95 189 1.8E-27 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 529 2.4E-199 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS17420 ff076c8657097294a210aad77335cb44 790 SUPERFAMILY SSF69349 449 632 3.53E-40 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 SUPERFAMILY SSF69279 192 371 4.25E-44 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 SUPERFAMILY SSF69255 371 459 8.11E-33 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 SUPERFAMILY SSF69279 10 185 2.89E-54 T 29-03-2018 AM474_RS17420 ff076c8657097294a210aad77335cb44 790 Gene3D G3DSA:2.40.50.230 377 459 3.3E-37 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Pfam PF01170 Putative RNA methylase family UPF0020 165 380 8.4E-44 T 29-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 SUPERFAMILY SSF53335 265 384 1.14E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 SUPERFAMILY SSF53335 143 224 1.14E-38 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 504 679 4.2E-19 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 725 33.195 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Pfam PF02926 THUMP domain 45 156 1.1E-11 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 PIRSF PIRSF037618 2 725 0.0 T 29-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Gene3D G3DSA:3.40.50.150 519 725 3.9E-40 T 29-03-2018 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Gene3D G3DSA:3.30.750.80 418 518 5.4E-8 T 29-03-2018 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 SMART SM00981 59 157 1.6E-22 T 29-03-2018 IPR004114 THUMP domain GO:0003723 AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 SUPERFAMILY SSF53335 421 720 1.31E-68 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS04460 1ea10e78d2d374103e1fea581e468872 725 Gene3D G3DSA:3.40.50.150 97 344 1.9E-31 T 29-03-2018 AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 6.0E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 9.6E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 9.6E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 9.6E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 SUPERFAMILY SSF55874 296 436 3.8E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 SUPERFAMILY SSF47384 212 280 4.71E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 Gene3D G3DSA:3.30.565.10 194 437 1.2E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS01125 d39148b196ab805de498a0d0884bf288 445 SMART SM00387 332 438 6.6E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS13315 e3621c8c0d843f91b559b438edadf765 461 Pfam PF00474 Sodium:solute symporter family 32 413 1.9E-34 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS13315 e3621c8c0d843f91b559b438edadf765 461 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 395 415 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:1.10.10.60 208 259 3.5E-9 T 29-03-2018 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:1.10.10.60 165 207 1.2E-9 T 29-03-2018 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 SUPERFAMILY SSF46689 210 255 1.51E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 SUPERFAMILY SSF51182 16 182 3.11E-13 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 SMART SM00342 173 255 6.5E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 Pfam PF12833 Helix-turn-helix domain 181 256 1.3E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 Gene3D G3DSA:2.60.120.10 6 164 1.8E-11 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 Pfam PF02311 AraC-like ligand binding domain 19 143 2.7E-18 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS24450 7535d6219181a938e6320b36af334ae2 259 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 7 335 9.9E-187 T 29-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 7 108 7.7E-32 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 SMART SM00846 6 160 3.7E-68 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.40.50.720 2 169 3.5E-57 T 29-03-2018 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 166 322 3.0E-50 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 Gene3D G3DSA:3.30.360.10 170 325 4.4E-52 T 29-03-2018 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PIRSF PIRSF000149 4 345 1.6E-131 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF51735 7 175 4.38E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 279 294 2.4E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 115 128 2.4E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 238 255 2.4E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 181 197 2.4E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 154 172 2.4E-24 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11925 d9a860de488f409a211a52e6e8bdda8b 353 SUPERFAMILY SSF55347 160 324 3.27E-56 T 29-03-2018 AM474_RS13395 60fa873aff53a846172e34bb8f50019c 94 Gene3D G3DSA:3.30.70.100 1 69 4.1E-8 T 29-03-2018 AM474_RS13395 60fa873aff53a846172e34bb8f50019c 94 SUPERFAMILY SSF54909 6 81 4.29E-10 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS13395 60fa873aff53a846172e34bb8f50019c 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 69 1.6E-12 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS05035 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.8E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.8E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.8E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 SMART SM00411 1 91 7.5E-45 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 Gene3D G3DSA:4.10.520.10 1 94 5.5E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 2.1E-54 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM474_RS05035 582a77b41052061335656296b4908213 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.813 T 29-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 AM474_RS05035 582a77b41052061335656296b4908213 94 SUPERFAMILY SSF47729 1 92 3.68E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS05035 582a77b41052061335656296b4908213 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.4E-29 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS26785 943537ebfe28933544f3d975c8951af7 288 SUPERFAMILY SSF53850 68 287 9.34E-20 T 29-03-2018 AM474_RS26785 943537ebfe28933544f3d975c8951af7 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 287 1.4E-9 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS26785 943537ebfe28933544f3d975c8951af7 288 Gene3D G3DSA:3.40.190.10 65 288 5.5E-9 T 29-03-2018 AM474_RS21485 83790564acd3025eddef786f4c9c3b6d 109 Pfam PF02641 Uncharacterized ACR, COG1993 6 85 2.3E-13 T 29-03-2018 IPR003793 Domain of unknown function DUF190 AM474_RS21485 83790564acd3025eddef786f4c9c3b6d 109 SUPERFAMILY SSF54913 1 100 8.34E-28 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM474_RS21485 83790564acd3025eddef786f4c9c3b6d 109 Gene3D G3DSA:3.30.70.120 1 108 5.4E-24 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM474_RS31705 3b2eabb4a80442db0c61dbae04c501ce 264 SMART SM01040 112 198 1.8E-17 T 29-03-2018 IPR003497 BRO N-terminal domain AM474_RS31705 3b2eabb4a80442db0c61dbae04c501ce 264 Pfam PF02498 BRO family, N-terminal domain 114 198 1.9E-8 T 29-03-2018 IPR003497 BRO N-terminal domain AM474_RS28255 ab36424ed4642e761f1ab45b3a553882 610 SUPERFAMILY SSF56601 34 381 7.3E-69 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS28255 ab36424ed4642e761f1ab45b3a553882 610 Pfam PF00144 Beta-lactamase 43 376 6.9E-60 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS28255 ab36424ed4642e761f1ab45b3a553882 610 Gene3D G3DSA:3.40.710.10 24 389 1.8E-68 T 29-03-2018 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 266 274 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 72 86 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 48 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 48 62 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 3.9E-48 T 29-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 307 5.4E-13 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:2.40.30.10 1 96 1.3E-14 T 29-03-2018 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:3.10.20.30 219 317 1.2E-22 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF63380 2 96 1.96E-26 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF54292 209 316 5.51E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 Gene3D G3DSA:3.40.50.80 101 218 1.5E-22 T 29-03-2018 AM474_RS18675 fdbba09747bab9d798ffd7174ada2f58 317 SUPERFAMILY SSF52343 102 221 3.4E-29 T 29-03-2018 AM474_RS13185 3505a83f7c5978de6152eeed453cbb61 232 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 134 222 3.5E-19 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM474_RS13185 3505a83f7c5978de6152eeed453cbb61 232 SMART SM00702 43 222 3.4E-38 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AM474_RS13185 3505a83f7c5978de6152eeed453cbb61 232 Gene3D G3DSA:2.60.120.620 31 229 2.3E-34 T 29-03-2018 AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 Gene3D G3DSA:3.40.50.720 1 199 8.2E-27 T 29-03-2018 AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 SUPERFAMILY SSF51735 2 197 6.15E-24 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 2.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 2.5E-6 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS24200 35c52dd643ce546ee56859ffe4051489 199 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 163 4.2E-13 T 29-03-2018 AM474_RS32030 ec4f52281615e9e713beeaf9f3ad6f98 278 SUPERFAMILY SSF52833 106 264 1.06E-32 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32030 ec4f52281615e9e713beeaf9f3ad6f98 278 Pfam PF00578 AhpC/TSA family 133 244 6.3E-15 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS32030 ec4f52281615e9e713beeaf9f3ad6f98 278 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS32030 ec4f52281615e9e713beeaf9f3ad6f98 278 Gene3D G3DSA:3.40.30.10 130 275 6.4E-26 T 29-03-2018 AM474_RS27720 8b970db150ffb5b89e62797058fed54b 123 Gene3D G3DSA:3.30.1460.10 4 119 1.6E-23 T 29-03-2018 AM474_RS27720 8b970db150ffb5b89e62797058fed54b 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 2.1E-47 T 29-03-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 AM474_RS27720 8b970db150ffb5b89e62797058fed54b 123 SUPERFAMILY SSF69635 2 121 3.45E-40 T 29-03-2018 AM474_RS31010 99221a8d80cfea7e174df13ea199fde7 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 7.3E-30 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS31010 99221a8d80cfea7e174df13ea199fde7 156 Gene3D G3DSA:3.40.50.2300 1 135 5.6E-31 T 29-03-2018 AM474_RS31010 99221a8d80cfea7e174df13ea199fde7 156 SUPERFAMILY SSF52788 1 136 1.44E-36 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS31010 99221a8d80cfea7e174df13ea199fde7 156 SMART SM00226 1 136 2.2E-54 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS07520 9d967f9019d28f375d7fc8f41695c385 82 Pfam PF01206 Sulfurtransferase TusA 11 77 2.8E-18 T 29-03-2018 IPR001455 TusA-like domain AM474_RS07520 9d967f9019d28f375d7fc8f41695c385 82 SUPERFAMILY SSF64307 5 77 3.79E-20 T 29-03-2018 IPR001455 TusA-like domain AM474_RS07520 9d967f9019d28f375d7fc8f41695c385 82 Gene3D G3DSA:3.30.110.40 1 78 4.4E-18 T 29-03-2018 IPR001455 TusA-like domain AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 Gene3D G3DSA:3.30.9.10 213 356 3.4E-23 T 29-03-2018 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 3 408 54.216 T 29-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 SUPERFAMILY SSF51905 4 56 1.42E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 SUPERFAMILY SSF51905 109 269 1.42E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 SUPERFAMILY SSF51905 357 406 1.42E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 SUPERFAMILY SSF54373 267 357 1.31E-13 T 29-03-2018 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 Gene3D G3DSA:3.40.50.720 2 148 6.8E-11 T 29-03-2018 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 Pfam PF01266 FAD dependent oxidoreductase 4 394 5.4E-66 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS17450 ab99355ceb7eab50b65bf5efbd2bd37e 416 Gene3D G3DSA:3.30.9.10 149 212 3.1E-4 T 29-03-2018 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 Pfam PF00775 Dioxygenase 49 230 6.5E-57 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 43 1.1E-14 T 29-03-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 Gene3D G3DSA:2.60.130.10 2 239 1.2E-62 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 SUPERFAMILY SSF49482 11 238 1.44E-74 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS14010 c0cc21081ebd5304c4824ceb70c57f1c 239 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 1.5E-105 T 29-03-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 SUPERFAMILY SSF51735 269 561 9.67E-93 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 3.5E-77 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PIRSF PIRSF000106 1 562 2.5E-220 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 2 564 70.352 T 29-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 Gene3D G3DSA:3.40.50.10380 13 266 3.8E-112 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 Pfam PF03949 Malic enzyme, NAD binding domain 269 529 9.4E-104 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 SUPERFAMILY SSF53223 5 268 7.19E-107 T 29-03-2018 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 SMART SM00919 269 530 5.8E-129 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 Gene3D G3DSA:3.40.50.720 267 564 1.8E-104 T 29-03-2018 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 145 174 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 181 203 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 85 109 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 265 281 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 296 312 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 240 258 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 PRINTS PR00072 Malic enzyme signature 407 423 2.9E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS06760 6ae31b45fabf571683323091cca71ecd 564 SMART SM01274 79 259 9.1E-105 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS06345 560a6d139f917af8bc3b2ab205972b0f 304 SMART SM00382 28 214 1.7E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06345 560a6d139f917af8bc3b2ab205972b0f 304 SUPERFAMILY SSF52540 3 218 2.31E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06345 560a6d139f917af8bc3b2ab205972b0f 304 Pfam PF00005 ABC transporter 20 156 1.9E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06345 560a6d139f917af8bc3b2ab205972b0f 304 Gene3D G3DSA:3.40.50.300 1 251 8.2E-58 T 29-03-2018 AM474_RS06345 560a6d139f917af8bc3b2ab205972b0f 304 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 419 7.8E-163 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 Gene3D G3DSA:3.40.47.10 272 422 1.5E-46 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 SMART SM00825 Beta-ketoacyl synthase 5 421 3.1E-13 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 265 377 1.0E-32 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 SUPERFAMILY SSF53901 223 421 1.73E-64 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 Gene3D G3DSA:3.40.47.10 5 269 1.9E-79 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 PIRSF PIRSF000447 1 422 1.8E-161 T 29-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 SUPERFAMILY SSF53901 3 261 1.15E-73 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 163 179 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM474_RS25975 2a8627cb2f51b8e7e1132d1ca7f49283 422 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 256 2.8E-60 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 206 1.4E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 141.851 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 Gene3D G3DSA:1.10.150.240 27 96 8.7E-34 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 Pfam PF13419 Haloacid dehalogenase-like hydrolase 29 206 8.2E-7 T 29-03-2018 IPR023214 HAD-like domain AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 Gene3D G3DSA:3.40.50.1000 97 261 7.8E-22 T 29-03-2018 IPR023214 HAD-like domain AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 SUPERFAMILY SSF56784 10 262 4.68E-57 T 29-03-2018 IPR023214 HAD-like domain AM474_RS25620 2e64f998b36037c3f5761992c89cee17 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 9 259 3.2E-112 T 29-03-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 AM474_RS01830 111fc18820e569067117881951295196 117 SUPERFAMILY SSF57716 83 115 9.98E-7 T 29-03-2018 AM474_RS01830 111fc18820e569067117881951295196 117 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 81 115 7.2E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS01830 111fc18820e569067117881951295196 117 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 86 110 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 Gene3D G3DSA:3.90.79.10 1 126 4.5E-29 T 29-03-2018 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 Gene3D G3DSA:3.20.20.70 127 313 1.0E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 Pfam PF14815 NUDIX domain 8 124 2.8E-21 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 SUPERFAMILY SSF51391 114 311 4.05E-44 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 Pfam PF02581 Thiamine monophosphate synthase 132 309 4.4E-34 T 29-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.0E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.0E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 125 2.7E-32 T 29-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 AM474_RS21395 c03bd771bb5ec5acb9927ea9c31cea44 315 SUPERFAMILY SSF55811 2 126 6.36E-39 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS20500 698b80fc6400b24b19b8cd4096db5b4e 322 Pfam PF00348 Polyprenyl synthetase 31 273 4.2E-71 T 29-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM474_RS20500 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM474_RS20500 698b80fc6400b24b19b8cd4096db5b4e 322 SUPERFAMILY SSF48576 5 321 1.12E-97 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM474_RS20500 698b80fc6400b24b19b8cd4096db5b4e 322 Gene3D G3DSA:1.10.600.10 1 322 1.6E-99 T 29-03-2018 IPR008949 Isoprenoid synthase domain AM474_RS20500 698b80fc6400b24b19b8cd4096db5b4e 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 29-03-2018 IPR033749 Polyprenyl synthetase, conserved site AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 Gene3D G3DSA:3.40.50.720 118 293 1.8E-47 T 29-03-2018 AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 Gene3D G3DSA:3.40.50.720 7 117 1.5E-27 T 29-03-2018 AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 1.2E-50 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 SUPERFAMILY SSF52283 17 141 1.0E-27 T 29-03-2018 AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 SUPERFAMILY SSF51735 106 291 4.57E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS20190 cfdd572ec6310e2cf3c98b326965a7d9 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 320 8.8E-26 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS20030 ed871157582991f3d6cd0d6198f1d4af 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 2.3E-110 T 29-03-2018 IPR010099 Epimerase family protein SDR39U1 AM474_RS20030 ed871157582991f3d6cd0d6198f1d4af 305 Gene3D G3DSA:3.40.50.720 1 303 1.7E-40 T 29-03-2018 AM474_RS20030 ed871157582991f3d6cd0d6198f1d4af 305 Pfam PF08338 Domain of unknown function (DUF1731) 250 296 2.0E-20 T 29-03-2018 IPR013549 Domain of unknown function DUF1731 AM474_RS20030 ed871157582991f3d6cd0d6198f1d4af 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 220 3.6E-25 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS20030 ed871157582991f3d6cd0d6198f1d4af 305 SUPERFAMILY SSF51735 1 301 1.31E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03500 dedf68d0ad0ff55bfb791d36815cfc8d 340 SUPERFAMILY SSF158855 63 335 1.06E-78 T 29-03-2018 AM474_RS03500 dedf68d0ad0ff55bfb791d36815cfc8d 340 Pfam PF03280 Proteobacterial lipase chaperone protein 135 325 1.5E-54 T 29-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AM474_RS03500 dedf68d0ad0ff55bfb791d36815cfc8d 340 Hamap MF_00790 Lipase chaperone [lifO]. 1 333 24.27 T 29-03-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 AM474_RS23290 96fac598f9df366ce925fe3c57b9e32c 182 Pfam PF01292 Prokaryotic cytochrome b561 9 179 5.2E-25 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS23290 96fac598f9df366ce925fe3c57b9e32c 182 SUPERFAMILY SSF81342 4 179 1.96E-37 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS23290 96fac598f9df366ce925fe3c57b9e32c 182 Gene3D G3DSA:1.20.950.20 1 182 2.4E-31 T 29-03-2018 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Pfam PF00072 Response regulator receiver domain 11 119 4.1E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 SUPERFAMILY SSF52172 9 192 3.27E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 SUPERFAMILY SSF52540 150 388 1.8E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Pfam PF00158 Sigma-54 interaction domain 149 313 5.0E-63 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 SMART SM00448 9 120 2.4E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Gene3D G3DSA:1.10.10.60 394 449 3.8E-9 T 29-03-2018 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Gene3D G3DSA:3.40.50.300 140 318 1.1E-24 T 29-03-2018 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Pfam PF02954 Bacterial regulatory protein, Fis family 407 447 7.9E-9 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 SMART SM00382 167 318 4.6E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Gene3D G3DSA:1.10.8.60 319 393 4.1E-25 T 29-03-2018 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 SUPERFAMILY SSF46689 360 449 4.35E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15330 13eb71c27df0228f59657f1ea6d14697 449 Gene3D G3DSA:3.40.50.2300 1 139 5.5E-33 T 29-03-2018 AM474_RS18750 59a144a589eed203e805dcdd0b1913a6 209 Gene3D G3DSA:1.10.10.60 1 38 1.2E-13 T 29-03-2018 AM474_RS18750 59a144a589eed203e805dcdd0b1913a6 209 SUPERFAMILY SSF46689 2 78 7.18E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS18750 59a144a589eed203e805dcdd0b1913a6 209 Gene3D G3DSA:1.10.260.40 39 70 1.5E-7 T 29-03-2018 AM474_RS18750 59a144a589eed203e805dcdd0b1913a6 209 Gene3D G3DSA:1.10.357.10 71 203 2.5E-5 T 29-03-2018 AM474_RS18750 59a144a589eed203e805dcdd0b1913a6 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 Gene3D G3DSA:2.60.40.10 14 150 5.8E-47 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 SUPERFAMILY SSF81296 15 158 1.4E-49 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 Gene3D G3DSA:3.20.20.80 151 590 2.8E-110 T 29-03-2018 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 SUPERFAMILY SSF51011 598 706 3.45E-27 T 29-03-2018 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 Gene3D G3DSA:2.60.40.1180 591 709 9.1E-28 T 29-03-2018 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 706 0.0 T 29-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 SMART SM00642 190 578 3.6E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 SUPERFAMILY SSF51445 510 587 2.42E-131 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 SUPERFAMILY SSF51445 149 481 2.42E-131 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 19 107 5.3E-20 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM474_RS30140 fa388b5ab114d5a807293ff3c9c77189 716 Pfam PF00128 Alpha amylase, catalytic domain 200 288 1.3E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS25780 67adff0f261ebbb6919aa1d8925d4057 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 238 4.3E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25780 67adff0f261ebbb6919aa1d8925d4057 248 SUPERFAMILY SSF161098 24 223 8.5E-42 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25780 67adff0f261ebbb6919aa1d8925d4057 248 Gene3D G3DSA:1.10.3720.10 3 239 2.4E-43 T 29-03-2018 AM474_RS25780 67adff0f261ebbb6919aa1d8925d4057 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 8.7E-18 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS20665 24fc20c5be955ad0389e02b272c27eb5 545 Pfam PF08479 POTRA domain, ShlB-type 61 134 1.6E-22 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM474_RS20665 24fc20c5be955ad0389e02b272c27eb5 545 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 196 489 3.1E-26 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM474_RS20665 24fc20c5be955ad0389e02b272c27eb5 545 Gene3D G3DSA:3.10.20.310 63 134 4.3E-18 T 29-03-2018 AM474_RS20665 24fc20c5be955ad0389e02b272c27eb5 545 Gene3D G3DSA:2.40.160.50 164 545 9.7E-45 T 29-03-2018 AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 Gene3D G3DSA:1.10.860.10 10 162 8.0E-50 T 29-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 455 4.5E-177 T 29-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 SUPERFAMILY SSF52540 293 446 7.77E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 SUPERFAMILY SSF52540 196 266 7.77E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 SUPERFAMILY SSF48024 18 129 1.31E-40 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 Gene3D G3DSA:3.40.50.300 179 462 4.2E-70 T 29-03-2018 AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 1.6E-37 T 29-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM474_RS18535 eb32536446e0e6cc412afa670f6097af 464 Pfam PF03796 DnaB-like helicase C terminal domain 197 453 1.8E-113 T 29-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM474_RS07695 1a84d04070c3fde9273b12d555f73055 401 Gene3D G3DSA:3.40.640.10 31 279 4.8E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS07695 1a84d04070c3fde9273b12d555f73055 401 Pfam PF00266 Aminotransferase class-V 24 389 5.4E-137 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS07695 1a84d04070c3fde9273b12d555f73055 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM474_RS07695 1a84d04070c3fde9273b12d555f73055 401 SUPERFAMILY SSF53383 6 398 1.86E-108 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS07695 1a84d04070c3fde9273b12d555f73055 401 Gene3D G3DSA:3.90.1150.10 280 396 2.3E-35 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 SMART SM00421 143 200 2.8E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 SMART SM00448 3 117 1.8E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 198 1.4E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 Gene3D G3DSA:3.40.50.2300 2 130 3.4E-23 T 29-03-2018 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 SUPERFAMILY SSF52172 3 127 8.97E-23 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 Pfam PF00072 Response regulator receiver domain 5 117 7.7E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 Gene3D G3DSA:1.10.10.10 131 203 1.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.1E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26040 4fe485549e41b6e4f123717ac7f5a351 210 SUPERFAMILY SSF46894 136 201 2.11E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS27665 99167ec96bce282365b81722877a9013 700 Gene3D G3DSA:3.40.720.10 305 599 9.2E-46 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS27665 99167ec96bce282365b81722877a9013 700 SUPERFAMILY SSF53649 315 677 8.72E-64 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS27665 99167ec96bce282365b81722877a9013 700 PIRSF PIRSF005091 16 695 3.4E-133 T 29-03-2018 IPR012160 Lipoteichoic acid synthase-like AM474_RS27665 99167ec96bce282365b81722877a9013 700 Pfam PF00884 Sulfatase 315 594 2.1E-45 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS13755 95da3f361c07ecbd5d07f340cbc0582f 193 Pfam PF06821 Serine hydrolase 8 178 6.8E-69 T 29-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 AM474_RS13755 95da3f361c07ecbd5d07f340cbc0582f 193 Gene3D G3DSA:3.40.50.1820 5 180 4.7E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13755 95da3f361c07ecbd5d07f340cbc0582f 193 SUPERFAMILY SSF53474 8 180 4.2E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 SUPERFAMILY SSF58104 236 545 3.92E-77 T 29-03-2018 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 SMART SM00283 269 544 1.9E-65 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 Gene3D G3DSA:1.10.287.950 308 545 4.0E-53 T 29-03-2018 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 SMART SM00304 214 268 4.8E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 SMART SM00304 433 492 110.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 2.2E-12 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 511 1.1E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 408 5.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 410 439 5.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 5.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 5.0E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 Pfam PF00672 HAMP domain 216 264 4.0E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03785 bcd52708a1c00367a08ac39213eca076 545 Gene3D G3DSA:1.20.120.30 26 186 6.8E-9 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:3.40.50.880 1 227 2.0E-30 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:1.10.10.60 271 322 1.5E-12 T 29-03-2018 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 Gene3D G3DSA:1.10.10.60 228 270 8.3E-11 T 29-03-2018 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 SMART SM00342 227 310 1.3E-33 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 4.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 4.8E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 210 261 1.43E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF52317 5 192 3.41E-24 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 SUPERFAMILY SSF46689 263 314 1.16E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23145 e26a1ca480701655494f807bc7f98610 329 Pfam PF12833 Helix-turn-helix domain 233 311 7.1E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS07660 7846039b65d70486e9cb3e457511df15 581 Pfam PF00999 Sodium/hydrogen exchanger family 35 447 3.1E-84 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS07660 7846039b65d70486e9cb3e457511df15 581 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 35 573 6.9E-127 T 29-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 AM474_RS04615 9744aa44a0179dac7637e53f85da773f 365 SUPERFAMILY SSF110296 78 323 1.05E-50 T 29-03-2018 AM474_RS04615 9744aa44a0179dac7637e53f85da773f 365 Pfam PF15899 BNR-Asp box repeat 265 278 0.06 T 29-03-2018 IPR002860 BNR repeat AM474_RS04615 9744aa44a0179dac7637e53f85da773f 365 Gene3D G3DSA:2.130.10.10 70 276 5.7E-36 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS04615 9744aa44a0179dac7637e53f85da773f 365 Pfam PF14870 Photosynthesis system II assembly factor YCF48 151 237 5.7E-16 T 29-03-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AM474_RS04615 9744aa44a0179dac7637e53f85da773f 365 Gene3D G3DSA:2.120.10.10 277 360 1.6E-9 T 29-03-2018 AM474_RS12115 0de461831ebcb13c583813a252a8eacb 150 Pfam PF13404 AsnC-type helix-turn-helix domain 1 45 2.6E-8 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS12115 0de461831ebcb13c583813a252a8eacb 150 SMART SM00344 1 108 0.0059 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS12115 0de461831ebcb13c583813a252a8eacb 150 Gene3D G3DSA:1.10.10.10 1 53 1.8E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12115 0de461831ebcb13c583813a252a8eacb 150 Gene3D G3DSA:3.30.70.920 54 131 5.4E-10 T 29-03-2018 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 SUPERFAMILY SSF53850 98 295 2.39E-31 T 29-03-2018 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.8E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 Gene3D G3DSA:1.10.10.10 3 90 3.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 SUPERFAMILY SSF46785 8 93 1.31E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 Pfam PF03466 LysR substrate binding domain 96 294 2.7E-34 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 Gene3D G3DSA:3.40.190.10 94 186 4.8E-19 T 29-03-2018 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 Gene3D G3DSA:3.40.190.10 187 268 4.1E-5 T 29-03-2018 AM474_RS24650 2e99ab79a5f11bca6289cb8f5e3160be 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.3E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 29-03-2018 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-16 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:3.40.50.2300 55 174 7.3E-40 T 29-03-2018 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 SUPERFAMILY SSF53822 61 333 7.4E-90 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 SUPERFAMILY SSF47413 1 59 2.38E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 SMART SM00354 1 71 7.6E-32 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.2E-41 T 29-03-2018 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:1.10.260.40 2 54 2.4E-19 T 29-03-2018 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.9E-5 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS29055 40f1b641b669af4b58987739a7fe62d7 337 Gene3D G3DSA:3.40.50.2300 175 313 1.0E-44 T 29-03-2018 AM474_RS05510 722b2a8afd8e377c183d9fb990fba9d8 211 Gene3D G3DSA:3.30.2350.10 5 211 6.4E-60 T 29-03-2018 AM474_RS05510 722b2a8afd8e377c183d9fb990fba9d8 211 Pfam PF00849 RNA pseudouridylate synthase 15 161 4.4E-30 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS05510 722b2a8afd8e377c183d9fb990fba9d8 211 SUPERFAMILY SSF55120 5 210 1.01E-61 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS05510 722b2a8afd8e377c183d9fb990fba9d8 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS29915 a24b25155d1f8fa3b699eb44982d6702 142 Pfam PF12680 SnoaL-like domain 16 111 4.7E-9 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS29915 a24b25155d1f8fa3b699eb44982d6702 142 SUPERFAMILY SSF54427 10 118 6.86E-20 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS29915 a24b25155d1f8fa3b699eb44982d6702 142 Gene3D G3DSA:3.10.450.50 2 142 2.9E-24 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:3.30.70.1440 683 781 3.0E-23 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82866 844 1040 3.01E-46 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 41 134 4.19E-25 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.4E-94 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 821 870 5.49E-25 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 683 734 5.49E-25 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:1.20.1640.10 838 1043 6.1E-40 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:1.20.1640.10 278 501 7.6E-49 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Pfam PF00873 AcrB/AcrD/AcrF family 3 1040 0.0 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82866 299 499 2.75E-50 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 138 184 2.2E-28 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 277 333 2.2E-28 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:3.30.2090.10 183 277 5.4E-18 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1051 0.0 T 29-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:3.30.70.1430 578 679 1.5E-18 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82693 576 682 2.22E-27 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 Gene3D G3DSA:3.30.70.1430 40 142 3.9E-25 T 29-03-2018 AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82714 735 820 2.35E-20 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS32120 6f98ecc5f52d2a88342a2a8f3da24653 1062 SUPERFAMILY SSF82714 185 274 8.37E-21 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS29145 67b27973477ffd3425641fbfbe097754 123 SUPERFAMILY SSF55331 2 122 2.66E-30 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily AM474_RS29145 67b27973477ffd3425641fbfbe097754 123 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 117 4.9E-6 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AM474_RS29145 67b27973477ffd3425641fbfbe097754 123 Gene3D G3DSA:3.30.429.10 1 122 5.1E-32 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 Gene3D G3DSA:3.50.50.60 127 243 7.6E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.7E-77 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.5E-120 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 Gene3D G3DSA:3.50.50.60 259 316 4.8E-8 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 Gene3D G3DSA:3.50.50.60 1 126 4.4E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 SUPERFAMILY SSF51905 2 313 9.36E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.5E-38 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.5E-38 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.5E-38 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.5E-38 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.5E-38 T 29-03-2018 AM474_RS00920 99083a68e91c78d221ecefe8eb6a971b 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 7.0E-49 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13045 be0548e784309c192ee31b627747bc80 217 Gene3D G3DSA:3.40.50.1000 79 208 7.3E-14 T 29-03-2018 IPR023214 HAD-like domain AM474_RS13045 be0548e784309c192ee31b627747bc80 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 7.1E-40 T 29-03-2018 AM474_RS13045 be0548e784309c192ee31b627747bc80 217 SUPERFAMILY SSF56784 2 210 1.58E-34 T 29-03-2018 IPR023214 HAD-like domain AM474_RS13045 be0548e784309c192ee31b627747bc80 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 202 7.0E-42 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM474_RS13045 be0548e784309c192ee31b627747bc80 217 Gene3D G3DSA:1.20.1440.100 16 78 6.0E-28 T 29-03-2018 AM474_RS13045 be0548e784309c192ee31b627747bc80 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 1.6E-26 T 29-03-2018 AM474_RS31240 7cf49da4e6a8a6d7bdf915611082e3ba 469 Pfam PF00296 Luciferase-like monooxygenase 27 389 3.3E-53 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS31240 7cf49da4e6a8a6d7bdf915611082e3ba 469 SUPERFAMILY SSF51679 1 440 1.44E-128 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS31240 7cf49da4e6a8a6d7bdf915611082e3ba 469 PIRSF PIRSF000337 2 448 4.2E-146 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM474_RS31240 7cf49da4e6a8a6d7bdf915611082e3ba 469 Gene3D G3DSA:3.20.20.30 1 457 7.9E-114 T 29-03-2018 AM474_RS31240 7cf49da4e6a8a6d7bdf915611082e3ba 469 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 434 1.5E-171 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Pfam PF00384 Molybdopterin oxidoreductase 113 253 8.0E-11 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Pfam PF00384 Molybdopterin oxidoreductase 318 495 1.0E-9 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 SUPERFAMILY SSF50692 649 768 2.49E-14 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 PIRSF PIRSF000144 2 770 0.0 T 29-03-2018 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Gene3D G3DSA:3.40.50.740 333 621 7.8E-46 T 29-03-2018 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Gene3D G3DSA:2.40.40.20 649 771 1.1E-18 T 29-03-2018 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Gene3D G3DSA:3.40.50.740 114 283 6.8E-40 T 29-03-2018 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 Pfam PF01568 Molydopterin dinucleotide binding domain 652 737 1.7E-5 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 17 765 2.9E-288 T 29-03-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 AM474_RS16935 d16937f51bc3219f327f905c16aabe77 773 SUPERFAMILY SSF53706 51 634 1.44E-146 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 Gene3D G3DSA:1.20.1250.20 252 494 2.0E-27 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 6.5E-8 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 6.5E-8 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 6.5E-8 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 6.5E-8 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 SUPERFAMILY SSF103473 461 488 1.18E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 SUPERFAMILY SSF103473 3 191 1.18E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 SUPERFAMILY SSF103473 244 414 1.18E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 Gene3D G3DSA:1.20.1250.20 1 251 4.3E-29 T 29-03-2018 AM474_RS25475 b6704adf861676ea4eb5196cd9c7c0d5 501 Pfam PF07690 Major Facilitator Superfamily 15 404 1.6E-48 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS24990 192172f69608d0f6b6c8dcf076e3919a 205 SUPERFAMILY SSF52499 4 200 4.06E-53 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS24990 192172f69608d0f6b6c8dcf076e3919a 205 Pfam PF00857 Isochorismatase family 14 164 5.1E-22 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS24990 192172f69608d0f6b6c8dcf076e3919a 205 Gene3D G3DSA:3.40.50.850 1 205 1.9E-42 T 29-03-2018 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 Pfam PF01008 Initiation factor 2 subunit family 53 341 3.4E-74 T 29-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 341 1.4E-106 T 29-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:3.40.50.10470 149 357 1.8E-66 T 29-03-2018 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 Gene3D G3DSA:1.20.120.420 11 148 3.8E-46 T 29-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 352 40.114 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 SUPERFAMILY SSF100950 9 347 1.17E-114 T 29-03-2018 AM474_RS05075 f2717f018730c63156a81e6cb10c2e3c 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 341 2.7E-141 T 29-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 47.094 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 196 1.0E-60 T 29-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 Gene3D G3DSA:3.40.190.80 203 336 7.8E-55 T 29-03-2018 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 Gene3D G3DSA:3.30.540.10 7 202 7.4E-60 T 29-03-2018 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 SUPERFAMILY SSF56655 2 334 1.09E-116 T 29-03-2018 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PIRSF PIRSF500210 1 336 5.7E-128 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 2.3E-74 T 29-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS17320 d944d772111c3626cc238dfecce78a66 336 PIRSF PIRSF000904 1 336 1.5E-126 T 29-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 SMART SM00448 6 118 2.1E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 Gene3D G3DSA:3.40.50.2300 1 154 3.0E-39 T 29-03-2018 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 Gene3D G3DSA:3.60.40.10 155 394 7.5E-28 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 SMART SM00331 174 391 1.6E-13 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 SUPERFAMILY SSF52172 7 149 5.98E-40 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 Pfam PF00072 Response regulator receiver domain 9 110 1.5E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS02605 8577bc9a93949f98d3ea2548a610566a 394 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 391 9.2E-31 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS09265 5485adeb124be499a772dd992444acfb 261 Pfam PF15648 Restriction endonuclease fold toxin 5 116 203 1.1E-21 T 29-03-2018 IPR028904 Tox-REase-5 domain AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF53850 94 301 2.17E-40 T 29-03-2018 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 SUPERFAMILY SSF46785 4 115 8.56E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:1.10.10.10 2 90 4.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.8E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 92 179 9.4E-23 T 29-03-2018 AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 Pfam PF03466 LysR substrate binding domain 93 298 8.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13700 5c8dde2b62b6fe521955efe33cd15971 306 Gene3D G3DSA:3.40.190.10 180 271 1.6E-19 T 29-03-2018 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 Gene3D G3DSA:3.40.47.10 1 176 8.4E-38 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 Gene3D G3DSA:3.40.47.10 177 264 1.1E-21 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 Gene3D G3DSA:3.40.47.10 265 388 3.7E-29 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 PIRSF PIRSF000429 1 391 1.9E-113 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.6E-88 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.2E-128 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 5.0E-40 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 SUPERFAMILY SSF53901 269 390 1.73E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 SUPERFAMILY SSF53901 3 268 4.51E-81 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS09380 e8389780b4df81cfbd0db5a102c06cdb 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF141868 553 796 4.84E-73 T 29-03-2018 IPR001633 EAL domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.20.20.450 537 798 9.6E-79 T 29-03-2018 IPR001633 EAL domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 2.2E-45 T 29-03-2018 IPR000160 GGDEF domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SMART SM00091 245 311 3.4E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.30.450.20 224 366 3.7E-23 T 29-03-2018 AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 251 369 1.1E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF55073 379 537 2.35E-49 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00989 PAS fold 251 360 7.2E-12 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 4.9E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Gene3D G3DSA:3.30.70.270 367 536 1.9E-58 T 29-03-2018 AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SMART SM00267 363 535 2.5E-64 T 29-03-2018 IPR000160 GGDEF domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SMART SM00052 547 797 2.6E-69 T 29-03-2018 IPR001633 EAL domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 SUPERFAMILY SSF55785 232 361 3.32E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS22970 09a356a1c764c91504dd22fc57134f85 818 Pfam PF00563 EAL domain 553 792 5.2E-63 T 29-03-2018 IPR001633 EAL domain AM474_RS03020 79de34bd97098ad9e2190dc84e845861 249 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 249 9.7E-102 T 29-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AM474_RS03020 79de34bd97098ad9e2190dc84e845861 249 Pfam PF14348 Domain of unknown function (DUF4400) 51 246 3.0E-75 T 29-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type AM474_RS17475 bb2622b5cf8b874c64df723b8affeccc 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 9.6E-52 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM474_RS17475 bb2622b5cf8b874c64df723b8affeccc 145 Gene3D G3DSA:3.50.80.10 1 145 8.5E-53 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM474_RS17475 bb2622b5cf8b874c64df723b8affeccc 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.6E-52 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM474_RS17475 bb2622b5cf8b874c64df723b8affeccc 145 SUPERFAMILY SSF69500 1 144 2.75E-54 T 29-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain AM474_RS17475 bb2622b5cf8b874c64df723b8affeccc 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.917 T 29-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 AM474_RS31225 07565ac0b0f012ea9e597bca3a2c2ac7 541 SUPERFAMILY SSF53720 22 511 1.09E-104 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS31225 07565ac0b0f012ea9e597bca3a2c2ac7 541 Gene3D G3DSA:3.40.309.10 304 491 1.8E-45 T 29-03-2018 AM474_RS31225 07565ac0b0f012ea9e597bca3a2c2ac7 541 Gene3D G3DSA:3.40.605.10 27 303 4.3E-53 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS31225 07565ac0b0f012ea9e597bca3a2c2ac7 541 Pfam PF00171 Aldehyde dehydrogenase family 64 505 2.2E-93 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS31225 07565ac0b0f012ea9e597bca3a2c2ac7 541 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 146 23.492 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 Pfam PF02130 Uncharacterized protein family UPF0054 19 142 1.1E-35 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 143 5.4E-35 T 29-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 Gene3D G3DSA:3.40.390.30 1 153 1.4E-49 T 29-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 SUPERFAMILY SSF55486 5 148 1.9E-46 T 29-03-2018 AM474_RS09785 fc7c53cb804c93ba4660b4303d73c0b9 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 29-03-2018 IPR020549 Endoribonuclease YbeY, conserved site AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 1.2E-43 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Gene3D G3DSA:3.40.50.720 4 153 4.0E-45 T 29-03-2018 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 47.083 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 8.3E-38 T 29-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Gene3D G3DSA:1.10.1740.10 310 394 7.2E-30 T 29-03-2018 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 8.8E-43 T 29-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 SUPERFAMILY SSF55347 129 272 1.8E-61 T 29-03-2018 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 PIRSF PIRSF006205 4 396 8.4E-149 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 SUPERFAMILY SSF51735 4 153 9.97E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 389 7.4E-158 T 29-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS07610 8424f7cc4431b12e0561d0ecf9f60853 396 SUPERFAMILY SSF69055 300 393 5.1E-31 T 29-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 SUPERFAMILY SSF46689 291 338 2.9E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 Gene3D G3DSA:1.10.10.60 290 339 5.2E-10 T 29-03-2018 AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 SMART SM00342 256 338 4.0E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 Pfam PF12833 Helix-turn-helix domain 262 339 2.7E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 213 4.5E-44 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS01375 deb2f2430051048e397a5b06562363f8 339 Gene3D G3DSA:1.10.10.60 235 289 1.9E-4 T 29-03-2018 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Pfam PF03454 MoeA C-terminal region (domain IV) 336 402 1.6E-14 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 SMART SM00852 185 322 1.1E-35 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Gene3D G3DSA:2.40.340.10 336 405 8.5E-13 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 SUPERFAMILY SSF53218 182 327 2.75E-38 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 SUPERFAMILY SSF63867 332 403 9.94E-13 T 29-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 172 3.3E-46 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Gene3D G3DSA:3.90.105.10 107 167 2.0E-12 T 29-03-2018 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Gene3D G3DSA:3.90.105.10 31 88 4.3E-11 T 29-03-2018 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Pfam PF00994 Probable molybdopterin binding domain 197 320 3.1E-22 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 SUPERFAMILY SSF63882 11 180 1.83E-51 T 29-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09300 c5c79571e5e9037e5133ff55a172b8c7 407 Gene3D G3DSA:3.40.980.10 168 329 2.2E-49 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF14849 YidC periplasmic domain 208 380 4.5E-53 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF14849 YidC periplasmic domain 82 190 2.0E-24 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 255 273 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 452 475 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 288 303 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 535 558 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 361 381 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR00701 60kDa inner membrane protein signature 499 521 6.3E-76 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 Pfam PF02096 60Kd inner membrane protein 391 569 2.2E-61 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 390 569 2.6E-72 T 29-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 505 520 7.2E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 376 392 7.2E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 PRINTS PR01900 YidC translocation/secretion protein signature 524 548 7.2E-27 T 29-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 190 6.9E-42 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 208 389 1.0E-62 T 29-03-2018 IPR028053 Membrane insertase YidC, N-terminal AM474_RS14890 4e890f6119afe3153bd98e4910e86bd1 578 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 571 24.56 T 29-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 AM474_RS18440 bcc042d94cc19af157b7beccd8ea867a 155 Gene3D G3DSA:3.40.50.300 1 153 4.2E-49 T 29-03-2018 AM474_RS18440 bcc042d94cc19af157b7beccd8ea867a 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 138 7.4E-47 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM474_RS18440 bcc042d94cc19af157b7beccd8ea867a 155 SUPERFAMILY SSF52540 29 128 7.45E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18440 bcc042d94cc19af157b7beccd8ea867a 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 130 2.3E-39 T 29-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM474_RS28015 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 160 8.6E-10 T 29-03-2018 AM474_RS28015 9acc0f9567e4d0e4da55c0833a7a9dfb 205 SUPERFAMILY SSF56784 2 191 1.15E-44 T 29-03-2018 IPR023214 HAD-like domain AM474_RS28015 9acc0f9567e4d0e4da55c0833a7a9dfb 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 2 203 4.2E-125 T 29-03-2018 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 AM474_RS28015 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.90.1470.10 13 85 5.6E-33 T 29-03-2018 AM474_RS28015 9acc0f9567e4d0e4da55c0833a7a9dfb 205 Gene3D G3DSA:3.90.1470.10 86 124 9.1E-11 T 29-03-2018 AM474_RS11680 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Gene3D G3DSA:3.40.250.10 2 108 3.5E-26 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS11680 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SUPERFAMILY SSF52821 3 101 5.37E-28 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS11680 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Pfam PF00581 Rhodanese-like domain 10 97 2.5E-16 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS11680 2f92f35296d9c4fc1df9d0feb1dd0e51 110 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 3 105 30.086 T 29-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 AM474_RS11680 2f92f35296d9c4fc1df9d0feb1dd0e51 110 SMART SM00450 8 102 2.5E-20 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.6E-97 T 29-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 629 642 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.8E-65 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 636 5.0E-128 T 29-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 639 2.7E-238 T 29-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26515 67e62be752845e8f0a430f67eb3e2fa9 657 Pfam PF01578 Cytochrome C assembly protein 89 296 7.2E-56 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM474_RS12620 74b1d3c5911b087b10beb25c2713bcfc 203 Pfam PF01810 LysE type translocator 14 199 1.6E-51 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS26275 a0d2f2ad99685fcf9090cd8689799a85 80 SUPERFAMILY SSF47413 17 58 9.78E-5 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS26275 a0d2f2ad99685fcf9090cd8689799a85 80 Gene3D G3DSA:1.10.260.40 6 76 1.5E-6 T 29-03-2018 AM474_RS29345 3ac4c83e1790ad4ca75652c85588bc7b 450 SUPERFAMILY SSF103473 10 433 4.97E-79 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29345 3ac4c83e1790ad4ca75652c85588bc7b 450 Gene3D G3DSA:1.20.1250.20 13 210 2.2E-38 T 29-03-2018 AM474_RS29345 3ac4c83e1790ad4ca75652c85588bc7b 450 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS29345 3ac4c83e1790ad4ca75652c85588bc7b 450 Pfam PF07690 Major Facilitator Superfamily 29 396 1.8E-50 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS29345 3ac4c83e1790ad4ca75652c85588bc7b 450 Gene3D G3DSA:1.20.1250.20 237 447 3.7E-28 T 29-03-2018 AM474_RS24365 173349794ea864d41b88b17395719335 128 SUPERFAMILY SSF160214 52 127 8.5E-24 T 29-03-2018 IPR005186 FlaG protein AM474_RS24365 173349794ea864d41b88b17395719335 128 Pfam PF03646 FlaG protein 36 125 1.6E-24 T 29-03-2018 IPR005186 FlaG protein AM474_RS24365 173349794ea864d41b88b17395719335 128 Gene3D G3DSA:3.30.160.170 29 124 1.3E-24 T 29-03-2018 IPR005186 FlaG protein AM474_RS00465 aae3ecac58980cd091fff7c460598df1 424 Gene3D G3DSA:1.20.1250.20 14 210 1.4E-22 T 29-03-2018 AM474_RS00465 aae3ecac58980cd091fff7c460598df1 424 Pfam PF07690 Major Facilitator Superfamily 32 321 2.0E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00465 aae3ecac58980cd091fff7c460598df1 424 Gene3D G3DSA:1.20.1250.20 221 424 2.5E-22 T 29-03-2018 AM474_RS00465 aae3ecac58980cd091fff7c460598df1 424 SUPERFAMILY SSF103473 2 413 2.09E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS26650 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 PIRSF PIRSF029416 1 109 1.7E-51 T 29-03-2018 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 AM474_RS26650 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 Gene3D G3DSA:3.40.50.2300 3 40 3.0E-9 T 29-03-2018 AM474_RS26650 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 SUPERFAMILY SSF52788 1 107 2.49E-19 T 29-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily AM474_RS26650 8e0a4aab1926aa5bf6fb80c4d45ebfd6 109 Gene3D G3DSA:3.40.50.2300 41 102 7.0E-4 T 29-03-2018 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 268 9.3E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 Gene3D G3DSA:2.170.130.10 127 269 9.5E-33 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 SMART SM00965 64 114 8.3E-12 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 SUPERFAMILY SSF56935 137 333 6.23E-95 T 29-03-2018 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 SUPERFAMILY SSF56935 396 525 6.23E-95 T 29-03-2018 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 SUPERFAMILY SSF56935 809 983 6.23E-95 T 29-03-2018 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 SUPERFAMILY SSF56935 559 769 6.23E-95 T 29-03-2018 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 Pfam PF07660 Secretin and TonB N terminus short domain 66 113 4.2E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 Pfam PF00593 TonB dependent receptor 422 981 2.5E-40 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS29600 972e80816e74e4fd75a6145a5e9bf4c7 985 Gene3D G3DSA:2.40.170.20 270 983 2.0E-65 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS05110 d9bdc865acc0bb7014c7eebcbd655756 404 Pfam PF03616 Sodium/glutamate symporter 4 370 1.2E-149 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM474_RS05110 d9bdc865acc0bb7014c7eebcbd655756 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 400 1.6E-101 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM474_RS05110 d9bdc865acc0bb7014c7eebcbd655756 404 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 403 22.286 T 29-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 Gene3D G3DSA:1.10.260.40 8 78 6.6E-16 T 29-03-2018 AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 Gene3D G3DSA:2.10.109.10 117 246 3.2E-18 T 29-03-2018 AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 SUPERFAMILY SSF51306 109 243 2.09E-21 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 SUPERFAMILY SSF47413 10 74 8.19E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 Pfam PF01381 Helix-turn-helix 16 69 3.2E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 Pfam PF00717 Peptidase S24-like 159 224 3.8E-11 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS11570 ab8e4992c767ae63a1c8278b9bbb0b68 256 SMART SM00530 15 69 2.0E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Pfam PF00270 DEAD/DEAH box helicase 37 223 1.1E-24 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Gene3D G3DSA:3.40.50.300 6 243 1.9E-32 T 29-03-2018 AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 SMART SM00490 303 378 1.2E-11 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Pfam PF00271 Helicase conserved C-terminal domain 277 374 4.4E-14 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Gene3D G3DSA:3.40.50.300 264 405 2.0E-24 T 29-03-2018 AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 SUPERFAMILY SSF52540 44 225 4.29E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 SUPERFAMILY SSF52540 256 378 4.29E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Pfam PF08494 DEAD/H associated 644 846 2.0E-49 T 29-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Gene3D G3DSA:1.10.10.10 965 1041 1.9E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 Gene3D G3DSA:1.10.10.10 1178 1238 7.0E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05660 aae7738c264d046e5018365a84a71b98 1439 SMART SM00487 32 249 7.9E-31 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS01090 b180eee267a422bd6af96f5ecc0a8a76 486 Pfam PF00361 Proton-conducting membrane transporter 122 419 1.7E-80 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01090 b180eee267a422bd6af96f5ecc0a8a76 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 474 17.864 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM474_RS01090 b180eee267a422bd6af96f5ecc0a8a76 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 473 1.5E-128 T 29-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM474_RS01955 ff8d0b21a6f315c927d8e971b5fc7644 77 Pfam PF12021 Protein of unknown function (DUF3509) 7 68 1.3E-11 T 29-03-2018 IPR021898 Protein of unknown function DUF3509 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13533 Biotin-lipoyl like 43 88 9.5E-16 T 29-03-2018 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.50.100 152 249 1.5E-4 T 29-03-2018 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 235 2.7E-31 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 Pfam PF13437 HlyD family secretion protein 153 236 2.0E-12 T 29-03-2018 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 SUPERFAMILY SSF111369 42 222 1.03E-17 T 29-03-2018 AM474_RS05840 098c47856b04d8d23edf4d6fd8237275 285 Gene3D G3DSA:2.40.50.100 43 151 1.5E-11 T 29-03-2018 AM474_RS19795 e41b080caf28c9fa1bbb5aca29a54b4b 271 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 84 106 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS19795 e41b080caf28c9fa1bbb5aca29a54b4b 271 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 106 5.7E-13 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS19795 e41b080caf28c9fa1bbb5aca29a54b4b 271 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 50 210 2.3E-38 T 29-03-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AM474_RS19695 acc69feb8deb022ec8329122c4db7719 149 Pfam PF14248 Domain of unknown function (DUF4345) 4 120 1.8E-12 T 29-03-2018 IPR025597 Protein of unknown function DUF4345 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF46689 3 80 1.03E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.10.60 3 62 2.8E-17 T 29-03-2018 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.2E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.2E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 1.3E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 SUPERFAMILY SSF48498 76 200 6.43E-43 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 9.1E-62 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM474_RS26640 ae87a6d60f309e2f81e258e78e5e214b 216 Gene3D G3DSA:1.10.357.10 63 201 1.9E-23 T 29-03-2018 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 SUPERFAMILY SSF46689 188 236 6.72E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 Gene3D G3DSA:1.10.10.60 181 238 8.1E-11 T 29-03-2018 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 Pfam PF12833 Helix-turn-helix domain 208 282 1.1E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 SMART SM00342 202 283 6.6E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 SUPERFAMILY SSF46689 238 283 1.79E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31020 66d165ce37ffa3b31d4158dd4f311d98 284 Gene3D G3DSA:1.10.10.60 239 283 2.2E-9 T 29-03-2018 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:3.40.190.10 181 264 9.7E-11 T 29-03-2018 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF03466 LysR substrate binding domain 89 291 2.5E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF53850 91 292 2.17E-29 T 29-03-2018 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:1.10.10.10 1 85 7.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 SUPERFAMILY SSF46785 5 84 1.68E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 Gene3D G3DSA:3.40.190.10 90 180 3.0E-13 T 29-03-2018 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03580 1a6a6ed04a2ff7ac5e0e67f1c173cb06 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.0E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18575 222973e496c17a4427a433c030710b41 283 Gene3D G3DSA:2.30.30.60 130 179 6.2E-14 T 29-03-2018 AM474_RS18575 222973e496c17a4427a433c030710b41 283 Pfam PF00924 Mechanosensitive ion channel 74 262 1.7E-36 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS18575 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF50182 115 180 9.15E-16 T 29-03-2018 IPR010920 LSM domain AM474_RS18575 222973e496c17a4427a433c030710b41 283 Gene3D G3DSA:3.30.70.100 180 271 1.4E-8 T 29-03-2018 AM474_RS18575 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF82861 29 112 1.11E-15 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS18575 222973e496c17a4427a433c030710b41 283 SUPERFAMILY SSF82689 182 279 2.48E-16 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 Pfam PF00171 Aldehyde dehydrogenase family 11 462 3.2E-124 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 Gene3D G3DSA:3.40.605.10 1 259 2.9E-77 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 487 3.1E-253 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 Gene3D G3DSA:3.40.309.10 260 445 6.0E-45 T 29-03-2018 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 SUPERFAMILY SSF53720 4 457 8.9E-125 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS23170 d2e8a228b7547e78090030fee25aafa1 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 488 58.645 T 29-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AM474_RS05905 8a760a9582db5c44f93c717d49807281 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 274 4.1E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05905 8a760a9582db5c44f93c717d49807281 277 SUPERFAMILY SSF161098 70 268 1.44E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05905 8a760a9582db5c44f93c717d49807281 277 Gene3D G3DSA:1.10.3720.10 62 277 4.5E-21 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.6E-17 T 29-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:3.40.228.10 225 663 3.8E-100 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1241 0.0 T 29-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Pfam PF01568 Molydopterin dinucleotide binding domain 1094 1208 1.3E-22 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:3.30.2070.10 798 839 4.6E-4 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1131 1158 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 SUPERFAMILY SSF50692 1085 1241 4.07E-48 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:3.40.50.740 108 212 5.0E-6 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Pfam PF00384 Molybdopterin oxidoreductase 108 836 1.1E-163 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:2.40.40.20 1054 1244 1.0E-44 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 780 797 - T 29-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 SMART SM00926 43 105 5.5E-8 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:4.10.1200.10 1 26 1.2E-13 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 SUPERFAMILY SSF53706 4 1076 0.0 T 29-03-2018 AM474_RS09090 3b01fbacc7bda76fae82b8e5289fe787 1261 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 29-03-2018 AM474_RS06620 a773e670abe051054bee1690f59ce8d3 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 4.6E-192 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM474_RS06620 a773e670abe051054bee1690f59ce8d3 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 71.118 T 29-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 AM474_RS06620 a773e670abe051054bee1690f59ce8d3 382 SUPERFAMILY SSF51679 3 349 1.06E-96 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS06620 a773e670abe051054bee1690f59ce8d3 382 Gene3D G3DSA:3.20.20.30 1 359 1.1E-88 T 29-03-2018 AM474_RS06620 a773e670abe051054bee1690f59ce8d3 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 7.7E-85 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS21370 7de30bdf4172bac836b8879f38732bee 307 Pfam PF01551 Peptidase family M23 202 296 6.1E-32 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS21370 7de30bdf4172bac836b8879f38732bee 307 SUPERFAMILY SSF51261 94 300 3.3E-56 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS21370 7de30bdf4172bac836b8879f38732bee 307 Gene3D G3DSA:2.70.70.10 161 305 1.3E-46 T 29-03-2018 AM474_RS21370 7de30bdf4172bac836b8879f38732bee 307 Gene3D G3DSA:1.20.120.330 56 160 2.8E-5 T 29-03-2018 AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 PIRSF PIRSF000549 1 640 7.0E-289 T 29-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SMART SM00763 19 376 6.7E-221 T 29-03-2018 IPR013153 PrkA AAA domain AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF08298 PrkA AAA domain 20 376 1.4E-180 T 29-03-2018 IPR013153 PrkA AAA domain AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.1E-74 T 29-03-2018 IPR010650 PrkA C-terminal domain AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 Gene3D G3DSA:3.40.50.300 58 363 2.0E-10 T 29-03-2018 AM474_RS11685 685ebc3fd602a78c3aaeadb4d83ee3fa 640 SUPERFAMILY SSF52540 75 343 1.05E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 PIRSF PIRSF004640 1 362 9.5E-151 T 29-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 SUPERFAMILY SSF56014 265 352 3.27E-12 T 29-03-2018 AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 5.3E-133 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 SUPERFAMILY SSF51717 15 207 1.49E-10 T 29-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.441 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 Gene3D G3DSA:3.20.20.120 13 184 1.0E-20 T 29-03-2018 IPR029065 Enolase C-terminal domain-like AM474_RS08715 92bc4b8aa9c363c34d095ae7e235cbe7 369 Pfam PF04551 GcpE protein 13 352 7.8E-137 T 29-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM474_RS10680 6dcf77f1799386032a2d623fa299b810 343 SUPERFAMILY SSF81345 12 339 4.32E-67 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS10680 6dcf77f1799386032a2d623fa299b810 343 Gene3D G3DSA:1.10.3470.10 15 343 4.4E-59 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS10680 6dcf77f1799386032a2d623fa299b810 343 Pfam PF01032 FecCD transport family 33 339 5.2E-77 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM474_RS11985 271e543e377588a8a87c1e6bfdfc7c2a 276 SUPERFAMILY SSF103481 180 275 2.48E-12 T 29-03-2018 AM474_RS11985 271e543e377588a8a87c1e6bfdfc7c2a 276 Pfam PF00892 EamA-like transporter family 144 274 6.2E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS11985 271e543e377588a8a87c1e6bfdfc7c2a 276 SUPERFAMILY SSF103481 38 133 7.59E-13 T 29-03-2018 AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 166 1.6E-31 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 SUPERFAMILY SSF55846 22 177 1.07E-54 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 Pfam PF01471 Putative peptidoglycan binding domain 199 253 1.2E-8 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 Gene3D G3DSA:1.10.101.10 180 259 3.3E-10 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 SUPERFAMILY SSF47090 194 255 4.32E-17 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 SMART SM00644 24 165 7.9E-42 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS15320 0ff6f67626e8934ef081261531be5295 259 Gene3D G3DSA:3.40.80.10 22 177 1.1E-45 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS15660 6468f166b37505217e26dfa94d582a9a 182 Pfam PF11736 Protein of unknown function (DUF3299) 29 175 1.7E-45 T 29-03-2018 IPR021727 Protein of unknown function DUF3299 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:1.10.10.10 1 83 8.9E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 174 254 4.1E-23 T 29-03-2018 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 Gene3D G3DSA:3.40.190.10 88 173 2.9E-14 T 29-03-2018 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF46785 1 87 1.33E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 Pfam PF03466 LysR substrate binding domain 87 286 5.1E-47 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS04930 a5d7258747e46deef42901de44c8aacd 306 SUPERFAMILY SSF53850 89 287 1.26E-47 T 29-03-2018 AM474_RS15180 6b81303807f5671870192343787d27c6 292 Pfam PF12697 Alpha/beta hydrolase family 31 282 2.2E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS15180 6b81303807f5671870192343787d27c6 292 SUPERFAMILY SSF53474 12 288 7.97E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15180 6b81303807f5671870192343787d27c6 292 Gene3D G3DSA:3.40.50.1820 8 289 1.1E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05505 b439e58b3085f44731df075cc5596b79 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 7.6E-38 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM474_RS05505 b439e58b3085f44731df075cc5596b79 84 Gene3D G3DSA:3.30.1070.10 1 83 2.8E-31 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM474_RS05505 b439e58b3085f44731df075cc5596b79 84 SUPERFAMILY SSF55229 33 83 2.48E-17 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM474_RS05505 b439e58b3085f44731df075cc5596b79 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 20.708 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM474_RS05505 b439e58b3085f44731df075cc5596b79 84 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 6.5E-28 T 29-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 Pfam PF01192 RNA polymerase Rpb6 8 59 4.7E-17 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 SMART SM01409 8 61 4.8E-17 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 8.0E-23 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 SUPERFAMILY SSF63562 1 77 2.79E-25 T 29-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 Gene3D G3DSA:3.90.940.10 1 87 3.2E-26 T 29-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 AM474_RS16125 2f7b9e0750b55a019522f844daf10501 88 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.792 T 29-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 SUPERFAMILY SSF52540 396 708 2.52E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 Gene3D G3DSA:1.10.10.10 745 799 5.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 Pfam PF01580 FtsK/SpoIIIE family 425 635 3.6E-63 T 29-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 Gene3D G3DSA:3.40.50.300 246 674 3.3E-54 T 29-03-2018 AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 Pfam PF09397 Ftsk gamma domain 745 805 1.8E-26 T 29-03-2018 IPR018541 FtsK gamma domain AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 27 200 2.3E-40 T 29-03-2018 IPR025199 DNA translocase FtsK, 4TM region AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 SMART SM00843 743 808 7.7E-38 T 29-03-2018 IPR018541 FtsK gamma domain AM474_RS00915 d68bc2dd88024e1392423e9625965ae3 811 SUPERFAMILY SSF46785 743 806 1.29E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 28 41 4.9E-29 T 29-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 92 102 4.9E-29 T 29-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 66 79 4.9E-29 T 29-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 81 91 4.9E-29 T 29-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 PRINTS PR00606 Class ID cytochrome C signature 43 56 4.9E-29 T 29-03-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 100 1.5E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 SUPERFAMILY SSF46626 25 103 2.22E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12100 0c22eb0a87ea5a6e9f8fc615a0473325 104 Gene3D G3DSA:1.10.760.10 23 104 5.7E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15605 a41336ce3eaa57a6f12a321f5dc199d8 149 SUPERFAMILY SSF55729 5 136 3.99E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS15605 a41336ce3eaa57a6f12a321f5dc199d8 149 Pfam PF00583 Acetyltransferase (GNAT) family 38 135 1.8E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS15605 a41336ce3eaa57a6f12a321f5dc199d8 149 Gene3D G3DSA:3.40.630.30 1 137 3.0E-26 T 29-03-2018 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 Pfam PF07660 Secretin and TonB N terminus short domain 64 112 3.9E-9 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 141 254 1.3E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 Gene3D G3DSA:2.40.170.20 267 784 1.0E-82 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 SMART SM00965 63 114 2.8E-13 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 Pfam PF00593 TonB dependent receptor 344 781 2.0E-52 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 SUPERFAMILY SSF56935 126 784 3.66E-119 T 29-03-2018 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 Gene3D G3DSA:2.170.130.10 114 260 1.4E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS09235 486a3d04df173ccf6ad96c8835c02a81 784 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 142 784 1.4E-125 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS29230 88e81ce7c991d9db2d50a1d1d1bec91d 145 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 62 138 8.5E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29230 88e81ce7c991d9db2d50a1d1d1bec91d 145 Gene3D G3DSA:1.10.760.10 46 145 9.9E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29230 88e81ce7c991d9db2d50a1d1d1bec91d 145 SUPERFAMILY SSF46626 11 141 4.66E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29230 88e81ce7c991d9db2d50a1d1d1bec91d 145 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 11 143 1.0E-63 T 29-03-2018 IPR030991 Cytochrome c-550 PedF AM474_RS16280 528059135d44537a2fb92ac7dc650388 63 Pfam PF13617 YnbE-like lipoprotein 7 61 2.1E-26 T 29-03-2018 IPR025985 YnbE-like lipoprotein AM474_RS16280 528059135d44537a2fb92ac7dc650388 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 23 63 9.0E-17 T 29-03-2018 AM474_RS24375 6f5666942ffb9cf1e19ff13d7252d8d4 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 119 7.2E-17 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24375 6f5666942ffb9cf1e19ff13d7252d8d4 132 PIRSF PIRSF039090 1 130 1.5E-35 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24375 6f5666942ffb9cf1e19ff13d7252d8d4 132 Pfam PF02561 Flagellar protein FliS 6 119 2.6E-28 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24375 6f5666942ffb9cf1e19ff13d7252d8d4 132 SUPERFAMILY SSF101116 13 121 2.35E-28 T 29-03-2018 IPR003713 Flagellar protein FliS GO:0044780 AM474_RS24375 6f5666942ffb9cf1e19ff13d7252d8d4 132 Gene3D G3DSA:1.20.120.340 1 123 2.2E-30 T 29-03-2018 AM474_RS24345 41d83d31acfcccde1d015f104e3c0b51 204 SUPERFAMILY SSF51161 47 175 9.01E-19 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS24345 41d83d31acfcccde1d015f104e3c0b51 204 Gene3D G3DSA:2.160.10.10 84 187 6.6E-17 T 29-03-2018 AM474_RS24345 41d83d31acfcccde1d015f104e3c0b51 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 160 2.3E-4 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS17295 e1ec4adc4747e4118c2bf4ef45232777 194 Pfam PF13649 Methyltransferase domain 32 124 6.5E-12 T 29-03-2018 AM474_RS17295 e1ec4adc4747e4118c2bf4ef45232777 194 SUPERFAMILY SSF53335 2 159 7.24E-25 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS17295 e1ec4adc4747e4118c2bf4ef45232777 194 Gene3D G3DSA:3.40.50.150 1 173 6.0E-17 T 29-03-2018 AM474_RS25600 106cfaec7969c6f80029b25f3a08d723 257 Gene3D G3DSA:3.60.20.10 1 257 2.1E-40 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS25600 106cfaec7969c6f80029b25f3a08d723 257 Pfam PF13230 Glutamine amidotransferases class-II 1 254 7.0E-107 T 29-03-2018 IPR026869 Putative glutamine amidotransferase type 2 AM474_RS25600 106cfaec7969c6f80029b25f3a08d723 257 SUPERFAMILY SSF56235 2 251 8.93E-49 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Gene3D G3DSA:1.10.540.10 57 187 7.9E-24 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 73 186 5.2E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Gene3D G3DSA:2.40.110.10 191 282 4.9E-19 T 29-03-2018 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Gene3D G3DSA:1.20.140.10 283 426 6.2E-36 T 29-03-2018 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 SUPERFAMILY SSF47203 298 425 1.39E-37 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 397 416 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 425 7.0E-31 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 192 281 5.4E-10 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS18195 4d3ba9fd36184f230e954b055f69ff38 429 SUPERFAMILY SSF56645 68 290 3.27E-45 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS05720 477d6b4f1c3e8f5dedcf3aa1cc313c25 284 Hamap MF_00697 UPF0276 protein . 9 277 45.179 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 AM474_RS05720 477d6b4f1c3e8f5dedcf3aa1cc313c25 284 Gene3D G3DSA:3.20.20.150 4 280 5.3E-76 T 29-03-2018 AM474_RS05720 477d6b4f1c3e8f5dedcf3aa1cc313c25 284 Pfam PF05114 Protein of unknown function (DUF692) 8 269 4.7E-97 T 29-03-2018 IPR007801 Uncharacterised protein family UPF0276 AM474_RS05720 477d6b4f1c3e8f5dedcf3aa1cc313c25 284 SUPERFAMILY SSF51658 39 236 1.68E-5 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 SUPERFAMILY SSF53067 143 317 1.07E-44 T 29-03-2018 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 3.3E-102 T 29-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 SUPERFAMILY SSF109604 319 505 3.45E-50 T 29-03-2018 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 SUPERFAMILY SSF53067 17 139 1.1E-34 T 29-03-2018 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 Gene3D G3DSA:3.30.420.150 131 311 1.3E-35 T 29-03-2018 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 Pfam PF02541 Ppx/GppA phosphatase family 37 315 6.2E-77 T 29-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 Gene3D G3DSA:3.30.420.40 2 130 1.0E-39 T 29-03-2018 AM474_RS16620 9524f7142e6432d28a3f368738bd4e81 506 PIRSF PIRSF001267 6 506 1.4E-199 T 29-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 AM474_RS14415 fdfa4acfd0c6928b633e2e38f831e5c4 226 PIRSF PIRSF029287 1 219 1.3E-98 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AM474_RS14415 fdfa4acfd0c6928b633e2e38f831e5c4 226 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 5 139 1.3E-47 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AM474_RS14415 fdfa4acfd0c6928b633e2e38f831e5c4 226 Gene3D G3DSA:3.40.1730.10 2 221 8.2E-74 T 29-03-2018 AM474_RS14415 fdfa4acfd0c6928b633e2e38f831e5c4 226 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 5 139 5.9E-49 T 29-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 AM474_RS13505 f98e4e0ec5ee79790faa40133479ef78 228 Pfam PF06912 Protein of unknown function (DUF1275) 24 212 2.9E-32 T 29-03-2018 IPR010699 Protein of unknown function DUF1275 AM474_RS13505 f98e4e0ec5ee79790faa40133479ef78 228 Gene3D G3DSA:1.20.1250.20 7 224 4.3E-4 T 29-03-2018 AM474_RS04100 21c37f60c7fb160c68c60f0ae8bdb3f7 254 Pfam PF02348 Cytidylyltransferase 7 226 9.2E-56 T 29-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 AM474_RS04100 21c37f60c7fb160c68c60f0ae8bdb3f7 254 SUPERFAMILY SSF53448 5 251 2.07E-60 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS04100 21c37f60c7fb160c68c60f0ae8bdb3f7 254 Gene3D G3DSA:3.90.550.10 1 253 2.9E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS04100 21c37f60c7fb160c68c60f0ae8bdb3f7 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 253 44.077 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM474_RS04100 21c37f60c7fb160c68c60f0ae8bdb3f7 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 246 3.8E-93 T 29-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 AM474_RS00730 10c06b70ea6ba99543abf2632270e1c7 84 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 9.6E-42 T 29-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AM474_RS00730 10c06b70ea6ba99543abf2632270e1c7 84 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 1.4E-37 T 29-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AM474_RS00730 10c06b70ea6ba99543abf2632270e1c7 84 SUPERFAMILY SSF143011 2 83 2.88E-27 T 29-03-2018 IPR035095 Toxin RelE-like domain AM474_RS00730 10c06b70ea6ba99543abf2632270e1c7 84 Gene3D G3DSA:3.30.2310.20 1 84 1.1E-24 T 29-03-2018 AM474_RS20635 3745d66a2845b83197b67f5f2057d729 242 Gene3D G3DSA:3.60.140.10 1 242 1.3E-92 T 29-03-2018 AM474_RS20635 3745d66a2845b83197b67f5f2057d729 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 239 6.2E-77 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM474_RS20635 3745d66a2845b83197b67f5f2057d729 242 SUPERFAMILY SSF64438 3 241 1.56E-84 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM474_RS20635 3745d66a2845b83197b67f5f2057d729 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 240 6.0E-59 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM474_RS15665 cdb9dc2452e323d010c3d8f000b29c7a 318 Gene3D G3DSA:2.70.98.10 12 312 2.2E-60 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM474_RS15665 cdb9dc2452e323d010c3d8f000b29c7a 318 Pfam PF01263 Aldose 1-epimerase 36 311 2.5E-62 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM474_RS15665 cdb9dc2452e323d010c3d8f000b29c7a 318 PIRSF PIRSF016020 11 312 3.5E-50 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AM474_RS15665 cdb9dc2452e323d010c3d8f000b29c7a 318 SUPERFAMILY SSF74650 21 309 5.27E-69 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 Pfam PF03466 LysR substrate binding domain 91 288 7.6E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 SUPERFAMILY SSF53850 92 289 2.86E-36 T 29-03-2018 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 SUPERFAMILY SSF46785 3 98 1.04E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 Gene3D G3DSA:1.10.10.10 1 89 1.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.5E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.6E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 7 285 4.6E-121 T 29-03-2018 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 Gene3D G3DSA:3.40.190.10 175 264 7.2E-20 T 29-03-2018 AM474_RS27020 8a59a314602f6e66c007ff4f45514b60 293 Gene3D G3DSA:3.40.190.10 90 174 2.3E-19 T 29-03-2018 AM474_RS20105 364020ed9e2860f55618740b57ec402e 137 Gene3D G3DSA:3.10.180.10 7 137 4.6E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS20105 364020ed9e2860f55618740b57ec402e 137 SUPERFAMILY SSF54593 1 135 9.35E-35 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS20105 364020ed9e2860f55618740b57ec402e 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 131 1.5E-11 T 29-03-2018 IPR028973 PhnB-like AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 Pfam PF06958 S-type Pyocin 412 556 3.3E-36 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 Gene3D G3DSA:1.20.120.20 213 670 1.1E-5 T 29-03-2018 AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 SUPERFAMILY SSF69369 350 586 8.76E-43 T 29-03-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 PRINTS PR01300 Pyocin S killer protein signature 359 377 3.1E-10 T 29-03-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 PRINTS PR01300 Pyocin S killer protein signature 394 417 3.1E-10 T 29-03-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 AM474_RS24695 dc3f0990a8f992cfd73c47a8f8035edf 690 PRINTS PR01300 Pyocin S killer protein signature 313 334 3.1E-10 T 29-03-2018 IPR003060 Pyocin S killer protein GO:0004519|GO:0005102|GO:0009405|GO:0009617|GO:0019835 AM474_RS20250 6fe6c99cd0ec931989e57c920aaafeba 332 PIRSF PIRSF006470 1 331 8.3E-118 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS20250 6fe6c99cd0ec931989e57c920aaafeba 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 314 7.7E-96 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM474_RS20250 6fe6c99cd0ec931989e57c920aaafeba 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 277 1.7E-65 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.8.60 503 559 3.6E-15 T 29-03-2018 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF00158 Sigma-54 interaction domain 322 480 1.1E-61 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 341 354 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 SMART SM00382 337 481 1.4E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.30.450.20 204 307 4.2E-5 T 29-03-2018 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.30.450.40 20 203 1.1E-15 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF01590 GAF domain 77 203 4.2E-8 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 529 538 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:1.10.10.60 560 620 5.6E-15 T 29-03-2018 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF52540 321 559 4.37E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF46689 528 617 4.78E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 SUPERFAMILY SSF55781 69 212 6.21E-10 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 404 419 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Pfam PF02954 Bacterial regulatory protein, Fis family 579 615 4.2E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 Gene3D G3DSA:3.40.50.300 308 502 3.1E-30 T 29-03-2018 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 598 618 3.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS10610 2f0342e20e540c20322f2a1b2bcd9b0f 625 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 581 598 3.3E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS32190 30b1975ba1c90f1ec384f6aab1989fe9 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.0E-37 T 29-03-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM474_RS32190 30b1975ba1c90f1ec384f6aab1989fe9 96 SUPERFAMILY SSF54909 1 95 3.75E-35 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS32190 30b1975ba1c90f1ec384f6aab1989fe9 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.4E-44 T 29-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM474_RS32190 30b1975ba1c90f1ec384f6aab1989fe9 96 PIRSF PIRSF001486 1 94 2.0E-44 T 29-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM474_RS32190 30b1975ba1c90f1ec384f6aab1989fe9 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 4.0E-28 T 29-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SUPERFAMILY SSF50156 385 472 6.57E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SMART SM00228 270 352 3.9E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SMART SM00228 384 463 6.0E-11 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SUPERFAMILY SSF50494 95 279 4.72E-70 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SUPERFAMILY SSF50494 6 48 4.72E-70 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Gene3D G3DSA:2.40.10.10 25 168 3.6E-41 T 29-03-2018 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Pfam PF13365 Trypsin-like peptidase domain 98 231 3.5E-35 T 29-03-2018 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 SUPERFAMILY SSF50156 252 358 4.05E-23 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Gene3D G3DSA:2.40.10.10 169 270 3.9E-40 T 29-03-2018 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Gene3D G3DSA:2.30.42.10 271 374 4.4E-27 T 29-03-2018 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 28 470 2.4E-162 T 29-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Gene3D G3DSA:2.30.42.10 383 474 3.0E-17 T 29-03-2018 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Pfam PF13180 PDZ domain 385 466 1.4E-9 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 Pfam PF13180 PDZ domain 271 360 3.5E-18 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 224 241 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 310 322 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 168 192 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS22475 8576b04ad06dc8f69fc6a095994ee79e 474 PRINTS PR00834 HtrA/DegQ protease family signature 202 219 4.7E-53 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS29960 fbcf810bf94b1f7daec595a6fa9dd685 183 SUPERFAMILY SSF49401 28 183 1.89E-24 T 29-03-2018 IPR008966 Adhesion domain AM474_RS29960 fbcf810bf94b1f7daec595a6fa9dd685 183 Gene3D G3DSA:2.60.40.1090 27 183 3.0E-28 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS29960 fbcf810bf94b1f7daec595a6fa9dd685 183 Pfam PF00419 Fimbrial protein 29 182 3.6E-10 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS18620 d24b93efef5ae130d4a834392501f041 231 SUPERFAMILY SSF55811 9 144 7.07E-22 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS18620 d24b93efef5ae130d4a834392501f041 231 Gene3D G3DSA:1.10.10.10 147 217 6.1E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18620 d24b93efef5ae130d4a834392501f041 231 Gene3D G3DSA:3.90.79.10 3 146 8.1E-24 T 29-03-2018 AM474_RS18620 d24b93efef5ae130d4a834392501f041 231 SUPERFAMILY SSF46785 151 217 2.58E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12635 29efb729e234e29ba48f005ead315332 343 Pfam PF01339 CheB methylesterase 153 328 1.3E-39 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS12635 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52738 149 332 6.15E-46 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS12635 29efb729e234e29ba48f005ead315332 343 SUPERFAMILY SSF52172 4 61 3.56E-5 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS12635 29efb729e234e29ba48f005ead315332 343 Gene3D G3DSA:3.40.50.2300 1 100 6.6E-4 T 29-03-2018 AM474_RS12635 29efb729e234e29ba48f005ead315332 343 PIRSF PIRSF000876 4 337 3.2E-65 T 29-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS12635 29efb729e234e29ba48f005ead315332 343 Gene3D G3DSA:3.40.50.180 141 337 3.2E-48 T 29-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AM474_RS19010 2eac24a92ca41adcd33518a15e95d470 178 SUPERFAMILY SSF55811 19 177 1.21E-34 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS19010 2eac24a92ca41adcd33518a15e95d470 178 Pfam PF00293 NUDIX domain 47 156 3.1E-16 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS19010 2eac24a92ca41adcd33518a15e95d470 178 PIRSF PIRSF017340 10 178 4.9E-77 T 29-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 AM474_RS19010 2eac24a92ca41adcd33518a15e95d470 178 Gene3D G3DSA:3.90.79.10 10 178 1.7E-31 T 29-03-2018 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF69864 175 400 1.96E-93 T 29-03-2018 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.8E-142 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:1.20.5.470 367 400 2.1E-15 T 29-03-2018 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.40.50.620 1 165 1.5E-30 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 Gene3D G3DSA:3.90.1260.10 166 357 1.1E-97 T 29-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 Pfam PF00764 Arginosuccinate synthase 8 397 8.3E-155 T 29-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 29-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 SUPERFAMILY SSF52402 5 209 3.31E-51 T 29-03-2018 AM474_RS06950 8108f5a9a8743fd0dfffc94bdbfbc065 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.756 T 29-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS30775 878a6d327efb39f4d07cbd0e71012ebf 303 SUPERFAMILY SSF53448 5 219 8.44E-36 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS30775 878a6d327efb39f4d07cbd0e71012ebf 303 Pfam PF13641 Glycosyltransferase like family 2 3 220 9.4E-14 T 29-03-2018 AM474_RS30775 878a6d327efb39f4d07cbd0e71012ebf 303 Gene3D G3DSA:3.90.550.10 2 227 4.6E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 Pfam PF03466 LysR substrate binding domain 88 294 2.0E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.8E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 SUPERFAMILY SSF46785 4 88 3.34E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 Gene3D G3DSA:1.10.10.10 2 80 2.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 SUPERFAMILY SSF53850 88 298 6.88E-38 T 29-03-2018 AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 Gene3D G3DSA:3.40.190.10 175 266 1.7E-20 T 29-03-2018 AM474_RS13865 0a39641220076a3cba289cf7d2dfd746 310 Gene3D G3DSA:3.40.190.10 81 174 2.2E-13 T 29-03-2018 AM474_RS13140 27b31ce42c1dc24dbe0ebb643fe56002 329 Gene3D G3DSA:2.130.10.10 47 220 9.7E-10 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS13140 27b31ce42c1dc24dbe0ebb643fe56002 329 SUPERFAMILY SSF50956 39 318 1.44E-41 T 29-03-2018 AM474_RS13140 27b31ce42c1dc24dbe0ebb643fe56002 329 Gene3D G3DSA:2.120.10.30 232 329 7.2E-5 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS13140 27b31ce42c1dc24dbe0ebb643fe56002 329 Pfam PF06977 SdiA-regulated 70 316 4.4E-92 T 29-03-2018 IPR009722 SdiA-regulated AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF101801 247 322 3.14E-14 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 PIRSF PIRSF002888 3 323 1.0E-91 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 Gene3D G3DSA:2.30.330.10 237 323 4.7E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF02154 Flagellar motor switch protein FliM 38 229 4.3E-75 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 Gene3D G3DSA:3.40.1550.10 46 234 6.0E-43 T 29-03-2018 IPR028976 CheC-like domain AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 319 2.3E-109 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.4E-21 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 3.4E-21 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.4E-21 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.4E-21 T 29-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 1.4E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF103039 55 230 1.28E-19 T 29-03-2018 IPR028976 CheC-like domain AM474_RS26335 cd00c6d6044b70d67ce0592151621b7f 323 SUPERFAMILY SSF103039 6 15 1.28E-19 T 29-03-2018 IPR028976 CheC-like domain AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 SUPERFAMILY SSF56104 3 232 6.21E-80 T 29-03-2018 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.413 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 Gene3D G3DSA:3.30.470.20 94 220 1.4E-47 T 29-03-2018 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 Pfam PF01259 SAICAR synthetase 7 231 2.5E-63 T 29-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 1.8E-79 T 29-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 Gene3D G3DSA:3.30.200.20 1 93 2.3E-27 T 29-03-2018 AM474_RS23905 6c6dd0696f9a52b393a737e9a0265892 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 29-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS03755 396d1005f54e07e84b434a13a485ef92 343 Gene3D G3DSA:1.10.3470.10 5 343 1.9E-70 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS03755 396d1005f54e07e84b434a13a485ef92 343 Pfam PF01032 FecCD transport family 22 341 6.1E-86 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM474_RS03755 396d1005f54e07e84b434a13a485ef92 343 SUPERFAMILY SSF81345 4 342 8.11E-77 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 Gene3D G3DSA:3.30.300.30 389 492 2.6E-10 T 29-03-2018 AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 Gene3D G3DSA:2.30.38.10 308 388 2.9E-19 T 29-03-2018 AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 Gene3D G3DSA:3.40.50.980 153 307 7.1E-26 T 29-03-2018 AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 Gene3D G3DSA:3.40.50.980 5 152 1.4E-19 T 29-03-2018 AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 Pfam PF00501 AMP-binding enzyme 21 394 3.5E-53 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS25055 12f1a6639b6d3f0671da10d71c0b54c0 492 SUPERFAMILY SSF56801 11 487 1.31E-88 T 29-03-2018 AM474_RS13200 09e84dfc935c35e00ba962184688bba1 203 Gene3D G3DSA:3.40.30.10 45 110 0.11 T 29-03-2018 AM474_RS13200 09e84dfc935c35e00ba962184688bba1 203 Gene3D G3DSA:3.40.30.10 120 202 0.042 T 29-03-2018 AM474_RS13200 09e84dfc935c35e00ba962184688bba1 203 SUPERFAMILY SSF52833 56 201 7.96E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 1.2E-151 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 SMART SM00382 55 182 7.4E-13 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:3.40.50.300 22 185 2.0E-24 T 29-03-2018 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.8.60 188 258 5.5E-33 T 29-03-2018 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 239 8.9E-117 T 29-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 2.6E-33 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF46785 261 334 1.47E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 SUPERFAMILY SSF52540 24 255 1.84E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 352 182.798 T 29-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 Gene3D G3DSA:1.10.10.10 261 331 3.3E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23570 4aad00807a06f2186c0c7c086fb2e5df 352 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 337 1.0E-42 T 29-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.2E-43 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 SMART SM01003 4 136 7.4E-69 T 29-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 Gene3D G3DSA:3.40.50.720 193 371 3.6E-41 T 29-03-2018 AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 Gene3D G3DSA:3.40.50.720 1 192 5.8E-46 T 29-03-2018 AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 SUPERFAMILY SSF51735 136 317 2.69E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 SUPERFAMILY SSF52283 2 167 4.0E-51 T 29-03-2018 AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 SMART SM01002 145 314 7.9E-85 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM474_RS13790 ec66f37672e7e745397fd116ae8a6e35 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 369 1.9E-73 T 29-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 657 4.8E-20 T 29-03-2018 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Pfam PF00690 Cation transporter/ATPase, N-terminus 29 94 3.5E-14 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SMART SM00831 26 99 8.8E-17 T 29-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Pfam PF00122 E1-E2 ATPase 147 353 3.8E-43 T 29-03-2018 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF81660 368 551 4.8E-36 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF81653 161 273 2.35E-26 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF56784 371 391 1.48E-37 T 29-03-2018 IPR023214 HAD-like domain AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF56784 493 742 1.48E-37 T 29-03-2018 IPR023214 HAD-like domain AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Gene3D G3DSA:3.40.1110.10 331 550 6.1E-37 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF81665 274 367 6.15E-99 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF81665 692 900 6.15E-99 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 SUPERFAMILY SSF81665 42 148 6.15E-99 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 392 7.6E-20 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 732 1.3E-28 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Gene3D G3DSA:2.70.150.10 36 275 1.8E-40 T 29-03-2018 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Gene3D G3DSA:1.20.1110.10 566 898 4.5E-52 T 29-03-2018 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 Pfam PF00689 Cation transporting ATPase, C-terminus 726 893 1.5E-15 T 29-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 286 302 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 407 420 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 303 322 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 5.6E-89 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS19090 eb96511907788661b79bcbf833d8f9c8 903 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 17 902 0.0 T 29-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00072 Response regulator receiver domain 11 125 3.7E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF52172 9 131 9.68E-19 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 Gene3D G3DSA:3.40.50.2300 2 152 1.3E-20 T 29-03-2018 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00421 151 208 1.2E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 Gene3D G3DSA:1.10.10.10 153 213 3.3E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 208 2.8E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 SUPERFAMILY SSF46894 146 212 4.76E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 SMART SM00448 9 125 2.2E-12 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS31475 a8d627a72c9e735486ecd5fdf6cd994e 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.8E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS31740 67656e8cbd36f24f2f3973d6fd80043b 334 SUPERFAMILY SSF111369 45 235 1.09E-17 T 29-03-2018 AM474_RS31740 67656e8cbd36f24f2f3973d6fd80043b 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 260 1.1E-13 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS31740 67656e8cbd36f24f2f3973d6fd80043b 334 Gene3D G3DSA:1.10.287.470 161 187 0.002 T 29-03-2018 AM474_RS31740 67656e8cbd36f24f2f3973d6fd80043b 334 Gene3D G3DSA:2.40.50.100 46 131 3.9E-13 T 29-03-2018 AM474_RS31740 67656e8cbd36f24f2f3973d6fd80043b 334 Gene3D G3DSA:2.40.50.100 188 332 5.6E-8 T 29-03-2018 AM474_RS13730 c246c6e78d53e73299c591bc16f25aa9 268 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 9 268 1.8E-99 T 29-03-2018 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 AM474_RS13730 c246c6e78d53e73299c591bc16f25aa9 268 SUPERFAMILY SSF52096 26 244 1.74E-18 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS13730 c246c6e78d53e73299c591bc16f25aa9 268 Gene3D G3DSA:3.90.226.10 12 264 5.9E-22 T 29-03-2018 AM474_RS13730 c246c6e78d53e73299c591bc16f25aa9 268 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 268 1.1E-100 T 29-03-2018 AM474_RS29785 c5d878f4a984e40c7281510630400605 359 Pfam PF00296 Luciferase-like monooxygenase 37 330 1.2E-49 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS29785 c5d878f4a984e40c7281510630400605 359 Gene3D G3DSA:3.20.20.30 13 359 7.7E-53 T 29-03-2018 AM474_RS29785 c5d878f4a984e40c7281510630400605 359 SUPERFAMILY SSF51679 30 352 2.65E-57 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 SUPERFAMILY SSF55486 25 223 1.21E-20 T 29-03-2018 AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 Pfam PF02018 Carbohydrate binding domain 461 586 1.9E-9 T 29-03-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 Gene3D G3DSA:2.60.120.260 458 600 4.7E-13 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 49 178 7.0E-25 T 29-03-2018 AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 Gene3D G3DSA:2.60.120.260 293 455 1.2E-7 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 SUPERFAMILY SSF49785 309 443 5.95E-14 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 Gene3D G3DSA:3.40.390.10 13 265 9.8E-17 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM474_RS02175 c859ac8d3c27c7db5fe063cf0a31fec7 602 SUPERFAMILY SSF49785 458 601 4.82E-24 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS11540 2d1598e790ee3c45e6ba11d3432276a2 108 Gene3D G3DSA:3.10.450.40 3 108 1.1E-24 T 29-03-2018 AM474_RS11540 2d1598e790ee3c45e6ba11d3432276a2 108 Pfam PF04965 Gene 25-like lysozyme 15 81 4.9E-16 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM474_RS11540 2d1598e790ee3c45e6ba11d3432276a2 108 SUPERFAMILY SSF160719 10 106 4.58E-25 T 29-03-2018 AM474_RS23130 06c06f9a1d7efe3d662505c32f739074 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 223 1.1E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS23130 06c06f9a1d7efe3d662505c32f739074 232 Gene3D G3DSA:1.10.3720.10 2 226 1.7E-36 T 29-03-2018 AM474_RS23130 06c06f9a1d7efe3d662505c32f739074 232 SUPERFAMILY SSF161098 13 215 2.09E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS23130 06c06f9a1d7efe3d662505c32f739074 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 5.3E-22 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:2.60.40.10 648 763 1.3E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 SUPERFAMILY SSF52279 494 650 5.23E-60 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 SUPERFAMILY SSF52279 394 463 5.23E-60 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 49 349 1.0E-82 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF14310 Fibronectin type III-like domain 685 753 7.2E-22 T 29-03-2018 IPR026891 Fibronectin type III-like domain AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:3.40.50.1700 379 647 2.4E-87 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Gene3D G3DSA:3.20.20.300 32 370 2.3E-98 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 272 289 - T 29-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 SMART SM01217 684 753 1.8E-30 T 29-03-2018 IPR026891 Fibronectin type III-like domain AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 119 138 2.9E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 2.9E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 165 181 2.9E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 272 290 2.9E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 116 2.9E-22 T 29-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 394 647 8.1E-61 T 29-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AM474_RS27850 60629cde5830bb69ad6eccb98c25a836 764 SUPERFAMILY SSF51445 32 392 2.32E-98 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 294 5.6E-48 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 Gene3D G3DSA:3.40.50.720 113 294 2.3E-45 T 29-03-2018 AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 SUPERFAMILY SSF51735 103 295 4.62E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 326 6.0E-30 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 SUPERFAMILY SSF52283 1 137 7.44E-33 T 29-03-2018 AM474_RS09605 db79939040ad99558d2e9fe6dc597887 336 Gene3D G3DSA:3.40.50.720 1 112 7.6E-29 T 29-03-2018 AM474_RS18140 42f9c699137459a47ccf0d0b0de81674 492 SUPERFAMILY SSF56112 289 460 1.66E-11 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS18140 42f9c699137459a47ccf0d0b0de81674 492 Gene3D G3DSA:1.10.510.10 64 219 4.0E-12 T 29-03-2018 AM474_RS18140 42f9c699137459a47ccf0d0b0de81674 492 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 322 449 3.7E-9 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM474_RS18140 42f9c699137459a47ccf0d0b0de81674 492 Gene3D G3DSA:3.90.1200.10 261 487 1.8E-6 T 29-03-2018 AM474_RS18140 42f9c699137459a47ccf0d0b0de81674 492 SUPERFAMILY SSF56112 49 176 2.63E-13 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 26 35 1.7E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 6 21 1.7E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 PRINTS PR00050 Cold shock protein signature 41 59 1.7E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 PIRSF PIRSF002599 1 69 1.5E-23 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 4.6E-29 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 Gene3D G3DSA:2.40.50.140 1 69 9.5E-29 T 29-03-2018 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 SMART SM00357 5 68 3.6E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS12415 9e2e5c27e8b6374fe031d2d06ee26562 69 SUPERFAMILY SSF50249 3 68 4.41E-25 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS00670 8286fc228bab220555410104337b4e8b 232 Pfam PF01144 Coenzyme A transferase 7 216 1.9E-75 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS00670 8286fc228bab220555410104337b4e8b 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 2.1E-79 T 29-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AM474_RS00670 8286fc228bab220555410104337b4e8b 232 Gene3D G3DSA:3.40.1080.10 1 232 2.8E-97 T 29-03-2018 AM474_RS00670 8286fc228bab220555410104337b4e8b 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 29-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS00670 8286fc228bab220555410104337b4e8b 232 SUPERFAMILY SSF100950 2 228 6.98E-87 T 29-03-2018 AM474_RS00670 8286fc228bab220555410104337b4e8b 232 SMART SM00882 5 217 2.3E-92 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 Pfam PF13537 Glutamine amidotransferase domain 97 145 2.0E-13 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 SUPERFAMILY SSF56235 1 193 9.44E-28 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 PIRSF PIRSF001589 1 76 1.9E-6 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 PIRSF PIRSF001589 94 531 2.4E-42 T 29-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 Gene3D G3DSA:3.60.20.10 46 200 3.5E-17 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 Pfam PF00733 Asparagine synthase 214 525 3.4E-45 T 29-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 Gene3D G3DSA:3.60.20.10 1 45 0.011 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 SUPERFAMILY SSF52402 390 490 1.38E-17 T 29-03-2018 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 SUPERFAMILY SSF52402 211 340 1.38E-17 T 29-03-2018 AM474_RS25050 7ed9e8eafb9c616679fdae1928dc78d6 532 Gene3D G3DSA:3.40.50.620 201 532 3.5E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 Gene3D G3DSA:3.40.50.1820 19 333 5.0E-76 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 1.5E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 1.5E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 1.5E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 Pfam PF00561 alpha/beta hydrolase fold 66 317 5.8E-24 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00412 Epoxide hydrolase signature 91 106 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00412 Epoxide hydrolase signature 150 163 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00412 Epoxide hydrolase signature 136 149 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00412 Epoxide hydrolase signature 306 328 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 PRINTS PR00412 Epoxide hydrolase signature 71 89 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS04490 59b6e303eb755c74cf24327544410c8c 333 SUPERFAMILY SSF53474 45 329 6.16E-62 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 Gene3D G3DSA:3.40.50.720 944 1285 3.2E-48 T 29-03-2018 AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 SUPERFAMILY SSF53223 761 962 5.18E-27 T 29-03-2018 AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 SUPERFAMILY SSF51735 951 1053 2.82E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 SUPERFAMILY SSF51735 1089 1245 2.82E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 PIRSF PIRSF036761 2 1614 0.0 T 29-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 AM474_RS04550 58f2d5707c87c277a7135d531a38049c 1620 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1607 0.0 T 29-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 314 8.1E-23 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 Gene3D G3DSA:3.40.50.300 1 315 4.8E-75 T 29-03-2018 AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 SMART SM00382 31 230 3.1E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 SUPERFAMILY SSF52540 3 251 3.99E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF00005 ABC transporter 23 180 8.5E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20855 ec05d4e6936aae96725f4ec385df6fea 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.3E-16 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS16550 66a11bbb0ece8e0df1a5f4c65d23fd54 209 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 22 110 8.4E-6 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS16550 66a11bbb0ece8e0df1a5f4c65d23fd54 209 Gene3D G3DSA:1.10.287.460 18 95 1.9E-7 T 29-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 AM474_RS16550 66a11bbb0ece8e0df1a5f4c65d23fd54 209 SUPERFAMILY SSF54534 22 208 1.57E-37 T 29-03-2018 AM474_RS16550 66a11bbb0ece8e0df1a5f4c65d23fd54 209 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 127 206 3.2E-18 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS16550 66a11bbb0ece8e0df1a5f4c65d23fd54 209 Gene3D G3DSA:3.10.50.40 96 209 1.2E-28 T 29-03-2018 AM474_RS06240 7e5487d0c97290a6c03017017a11be4a 185 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 2 179 35.742 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06240 7e5487d0c97290a6c03017017a11be4a 185 Gene3D G3DSA:3.40.50.300 1 183 2.0E-27 T 29-03-2018 AM474_RS06240 7e5487d0c97290a6c03017017a11be4a 185 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 3 177 2.8E-66 T 29-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06240 7e5487d0c97290a6c03017017a11be4a 185 SMART SM00072 2 182 6.3E-6 T 29-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM474_RS06240 7e5487d0c97290a6c03017017a11be4a 185 SUPERFAMILY SSF52540 3 180 6.48E-39 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 SUPERFAMILY SSF52833 1 85 1.88E-22 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 Gene3D G3DSA:3.40.30.10 1 93 2.3E-27 T 29-03-2018 AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 Gene3D G3DSA:1.20.1050.10 94 194 1.1E-22 T 29-03-2018 AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 SUPERFAMILY SSF47616 80 200 5.57E-28 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 196 6.0E-6 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS28750 5cd974247938799d3863d42fb2678fb4 207 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 80 7.0E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS30410 d96d4a0eacd74c95322a28cd3a8056cc 527 SUPERFAMILY SSF53720 22 518 6.15E-100 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS30410 d96d4a0eacd74c95322a28cd3a8056cc 527 Gene3D G3DSA:3.40.605.10 347 507 0.0022 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS30410 d96d4a0eacd74c95322a28cd3a8056cc 527 Gene3D G3DSA:3.40.605.10 5 328 1.1E-63 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS30410 d96d4a0eacd74c95322a28cd3a8056cc 527 Pfam PF00171 Aldehyde dehydrogenase family 35 456 3.6E-46 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 Pfam PF08281 Sigma-70, region 4 112 162 2.0E-18 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 Gene3D G3DSA:1.10.10.10 77 170 3.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 166 9.2E-27 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 Pfam PF04542 Sigma-70 region 2 13 80 2.8E-13 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 SUPERFAMILY SSF88946 8 85 4.71E-17 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 SUPERFAMILY SSF88659 96 169 4.58E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06445 9b2e82534227e4b1fb69443ba4f953b3 171 Gene3D G3DSA:1.10.1740.10 5 76 7.5E-17 T 29-03-2018 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 29-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 9.5E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 9.5E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 9.5E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 9.5E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 9.5E-27 T 29-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 SUPERFAMILY SSF51419 26 282 4.97E-81 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 368 2.8E-25 T 29-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 280 1.5E-80 T 29-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 Gene3D G3DSA:2.40.37.10 261 415 7.8E-49 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 SUPERFAMILY SSF50621 255 411 2.51E-53 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 43.038 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.0E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 5.0E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.0E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 5.0E-30 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 Gene3D G3DSA:3.20.20.10 34 260 6.0E-59 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16430 6693482cf028e478e7ecfe5b1ca78a6a 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 4.9E-162 T 29-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS08420 22bd28e10353f1e2b5b80e421f673411 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 183 5.0E-15 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS08420 22bd28e10353f1e2b5b80e421f673411 212 SUPERFAMILY SSF52540 2 210 2.03E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08420 22bd28e10353f1e2b5b80e421f673411 212 Gene3D G3DSA:3.40.50.300 2 210 1.1E-37 T 29-03-2018 AM474_RS08420 22bd28e10353f1e2b5b80e421f673411 212 PIRSF PIRSF009320 1 210 2.4E-50 T 29-03-2018 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 SMART SM01086 276 368 1.9E-15 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 Gene3D G3DSA:1.10.8.60 277 368 4.0E-13 T 29-03-2018 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 SMART SM00382 88 237 2.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 Pfam PF07724 AAA domain (Cdc48 subfamily) 87 269 2.0E-39 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 170 188 4.0E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 92 110 4.0E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 204 218 4.0E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 137 155 4.0E-29 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 Gene3D G3DSA:3.40.50.300 46 275 1.4E-38 T 29-03-2018 AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 SUPERFAMILY SSF52540 47 346 2.01E-49 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06165 7e7b588052312c039eb702f0e7baf556 371 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 279 347 1.3E-16 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 SUPERFAMILY SSF47005 112 153 7.85E-10 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Gene3D G3DSA:4.10.320.10 102 149 6.3E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Pfam PF02817 e3 binding domain 115 149 2.8E-13 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 163 369 4.9E-47 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Pfam PF00364 Biotin-requiring enzyme 3 73 1.6E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Gene3D G3DSA:3.30.559.10 150 370 5.3E-49 T 29-03-2018 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 SUPERFAMILY SSF52777 155 368 5.78E-55 T 29-03-2018 AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 SUPERFAMILY SSF51230 2 84 1.44E-24 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS06475 dfaacef0228614bc271c5b783b5293dc 370 Gene3D G3DSA:2.40.50.100 4 75 8.8E-16 T 29-03-2018 AM474_RS08465 0671104079e0739509acd181d11c93ab 105 Pfam PF05284 Protein of unknown function (DUF736) 3 98 1.4E-35 T 29-03-2018 IPR007948 Protein of unknown function DUF736 AM474_RS08285 7a758532621b9cb35f95d3226b1aef22 667 SUPERFAMILY SSF52540 105 554 5.84E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08285 7a758532621b9cb35f95d3226b1aef22 667 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 557 2.6E-103 T 29-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AM474_RS08285 7a758532621b9cb35f95d3226b1aef22 667 Gene3D G3DSA:3.40.50.300 97 557 7.8E-51 T 29-03-2018 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.4E-17 T 29-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Gene3D G3DSA:1.10.287.1150 86 170 3.7E-25 T 29-03-2018 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 SUPERFAMILY SSF52518 582 799 5.72E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 1.5E-65 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 PIRSF PIRSF000157 1 943 0.0 T 29-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 797 941 8.2E-55 T 29-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 SMART SM00861 599 792 1.3E-56 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 SUPERFAMILY SSF52518 126 550 1.06E-87 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Gene3D G3DSA:3.40.50.970 171 530 9.1E-89 T 29-03-2018 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Gene3D G3DSA:3.40.50.970 598 807 4.2E-56 T 29-03-2018 AM474_RS27100 43860ba9ddd2b302e4b10398fd2c109f 943 Pfam PF00676 Dehydrogenase E1 component 220 525 4.3E-55 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 206 217 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Gene3D G3DSA:3.40.50.980 16 211 1.6E-40 T 29-03-2018 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Pfam PF13193 AMP-binding enzyme C-terminal domain 465 540 1.3E-17 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS00080 0503f329795d1d41ac00136abc183185 564 SUPERFAMILY SSF56801 16 552 1.44E-157 T 29-03-2018 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Gene3D G3DSA:3.30.300.30 450 551 4.6E-29 T 29-03-2018 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Gene3D G3DSA:2.30.38.10 376 449 1.9E-27 T 29-03-2018 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Pfam PF00501 AMP-binding enzyme 24 456 1.6E-103 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS00080 0503f329795d1d41ac00136abc183185 564 Gene3D G3DSA:3.40.50.980 212 373 7.8E-50 T 29-03-2018 AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 Pfam PF13646 HEAT repeats 172 226 1.8E-6 T 29-03-2018 AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 Gene3D G3DSA:1.25.40.70 171 212 1.3E-6 T 29-03-2018 AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 Gene3D G3DSA:1.10.3470.10 213 517 2.4E-51 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 SUPERFAMILY SSF48371 125 225 4.03E-7 T 29-03-2018 IPR016024 Armadillo-type fold GO:0005488 AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 235 526 1.0E-132 T 29-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type AM474_RS18915 e2c4f99eba5ca50f87dbdb73d2b1a231 529 Pfam PF02653 Branched-chain amino acid transport system / permease component 237 512 2.1E-54 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:2.40.10.170 1 73 2.9E-27 T 29-03-2018 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 SMART SM00382 140 325 1.2E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:1.10.1140.10 346 456 1.1E-43 T 29-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF47917 343 457 1.28E-53 T 29-03-2018 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Gene3D G3DSA:3.40.50.300 74 345 1.0E-91 T 29-03-2018 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.2E-20 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 2.4E-254 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF50615 2 72 1.39E-23 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.229 T 29-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 1.3E-63 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS14970 1dfc8527acf239598835e56fdf7ee8b4 458 SUPERFAMILY SSF52540 75 346 6.71E-92 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 PIRSF PIRSF000429 1 379 2.1E-116 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 ProSitePatterns PS00737 Thiolases signature 2. 324 340 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 SUPERFAMILY SSF53901 257 376 8.35E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 376 1.3E-123 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 Gene3D G3DSA:3.40.47.10 249 375 9.6E-35 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 Pfam PF02803 Thiolase, C-terminal domain 256 376 5.8E-45 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 Gene3D G3DSA:3.40.47.10 1 248 2.3E-45 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 SUPERFAMILY SSF53901 5 253 3.26E-66 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS03895 1e6304b10148a7695c6f7eab29e6d590 379 Pfam PF00108 Thiolase, N-terminal domain 6 248 3.8E-59 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS08705 983a2458915415e9258f9cc3fe8cb6ab 214 Pfam PF09976 Tetratricopeptide repeat-like domain 14 210 1.2E-61 T 29-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AM474_RS08705 983a2458915415e9258f9cc3fe8cb6ab 214 SUPERFAMILY SSF48452 99 196 1.48E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08705 983a2458915415e9258f9cc3fe8cb6ab 214 Gene3D G3DSA:1.25.40.10 19 210 8.1E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08705 983a2458915415e9258f9cc3fe8cb6ab 214 PIRSF PIRSF006170 2 214 1.9E-68 T 29-03-2018 IPR026039 Uncharacterised protein family UPF0070 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 Gene3D G3DSA:1.10.357.10 1 208 3.5E-41 T 29-03-2018 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 SUPERFAMILY SSF48498 82 198 5.48E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 SUPERFAMILY SSF46689 3 70 4.39E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.4E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 93 171 1.2E-8 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 7.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS29420 dc5cb449a710ad0844ca281be9224893 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 7.5E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 SUPERFAMILY SSF51735 8 250 8.0E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 3.8E-55 T 29-03-2018 AM474_RS00500 d31c46302f71e423ec75f81e703983d4 272 Gene3D G3DSA:3.40.50.720 2 259 2.6E-60 T 29-03-2018 AM474_RS01025 4296ee47a916558e697bf0f6afe334eb 184 SUPERFAMILY SSF54637 39 176 9.95E-20 T 29-03-2018 IPR029069 HotDog domain AM474_RS01025 4296ee47a916558e697bf0f6afe334eb 184 Pfam PF14539 Domain of unknown function (DUF4442) 39 172 2.6E-33 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AM474_RS01025 4296ee47a916558e697bf0f6afe334eb 184 Gene3D G3DSA:3.10.129.10 23 172 2.3E-18 T 29-03-2018 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 Gene3D G3DSA:3.60.120.10 13 486 1.2E-166 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 Pfam PF00425 chorismate binding enzyme 223 476 2.6E-97 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 9.1E-170 T 29-03-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 SUPERFAMILY SSF56322 14 485 1.83E-159 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.1E-25 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.1E-25 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.1E-25 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.1E-25 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11580 758b314de157ab4a157f32e0fa0954bb 492 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 168 1.1E-32 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 233 4.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 217 4.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 245 4.9E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 Gene3D G3DSA:1.10.10.10 68 262 2.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 202 255 3.7E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 SUPERFAMILY SSF46894 191 259 9.52E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS26540 6681bc2423d10d9ebc4a040936b732fd 268 SMART SM00421 200 257 2.5E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 SUPERFAMILY SSF46785 3 108 2.44E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 SUPERFAMILY SSF53850 92 294 1.59E-34 T 29-03-2018 AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Pfam PF03466 LysR substrate binding domain 92 292 2.1E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.7E-15 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Gene3D G3DSA:3.40.190.10 93 178 3.0E-14 T 29-03-2018 AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Gene3D G3DSA:3.40.190.10 179 264 4.7E-20 T 29-03-2018 AM474_RS10600 f56bdb493d3b2fff30d70ebd1dd1cfd1 296 Gene3D G3DSA:1.10.10.10 4 80 2.8E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.40.1060.10 160 294 1.7E-42 T 29-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 139 154 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 292 306 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 114 122 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 125 138 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 201 214 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 349 360 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 406 419 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 215 228 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 PRINTS PR00415 Aconitase family signature 88 101 7.5E-48 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.10 1 159 1.0E-39 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 Gene3D G3DSA:3.30.499.10 324 474 4.5E-50 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 3.5E-233 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 1.6E-159 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 SUPERFAMILY SSF53732 2 472 2.49E-163 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 29-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM474_RS04840 922f5b848e2337631c98e688e7f83e30 474 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.578 T 29-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Gene3D G3DSA:2.60.40.1180 23 107 3.6E-17 T 29-03-2018 AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Gene3D G3DSA:2.60.40.1180 108 174 5.7E-19 T 29-03-2018 AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 SUPERFAMILY SSF81901 15 251 4.53E-43 T 29-03-2018 AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 SMART SM00671 148 183 1.5E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 SMART SM00671 114 147 5.1E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 SMART SM00671 76 111 6.6E-5 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 SMART SM00671 40 75 9.6E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 114 147 8.4E-8 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 236 250 0.72 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 148 183 5.5E-6 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 41 75 1.1E-5 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 202 215 120.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Pfam PF08238 Sel1 repeat 77 110 0.051 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS20800 24e44e4fc5de54f97fa5448947f8a9a4 271 Gene3D G3DSA:1.25.40.10 175 266 0.021 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 SUPERFAMILY SSF54373 229 323 2.22E-9 T 29-03-2018 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 Pfam PF04324 BFD-like [2Fe-2S] binding domain 400 451 8.1E-9 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 Gene3D G3DSA:3.30.9.10 94 177 7.7E-9 T 29-03-2018 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 SUPERFAMILY SSF51905 336 381 1.25E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 SUPERFAMILY SSF51905 12 231 1.25E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 Gene3D G3DSA:3.30.9.10 178 323 1.6E-33 T 29-03-2018 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 Gene3D G3DSA:3.40.50.720 10 64 9.6E-9 T 29-03-2018 AM474_RS26565 9f68fb4134fd8022ab37fd4c144d4fc5 469 Pfam PF01266 FAD dependent oxidoreductase 13 361 7.0E-56 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS23470 17caa45f6a1ad10fdbf77681070cc131 117 Gene3D G3DSA:3.40.30.10 1 117 2.5E-38 T 29-03-2018 AM474_RS23470 17caa45f6a1ad10fdbf77681070cc131 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 7.3E-45 T 29-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 AM474_RS23470 17caa45f6a1ad10fdbf77681070cc131 117 Pfam PF03960 ArsC family 9 115 3.7E-19 T 29-03-2018 IPR006660 Arsenate reductase-like AM474_RS23470 17caa45f6a1ad10fdbf77681070cc131 117 SUPERFAMILY SSF52833 5 116 4.89E-35 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS18875 6eec2c99fe09b5a7e678c66f8da009bd 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 5.9E-46 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18875 6eec2c99fe09b5a7e678c66f8da009bd 101 Gene3D G3DSA:2.10.150.10 1 101 2.1E-47 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18875 6eec2c99fe09b5a7e678c66f8da009bd 101 SUPERFAMILY SSF51278 1 101 6.02E-48 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18875 6eec2c99fe09b5a7e678c66f8da009bd 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.209 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18875 6eec2c99fe09b5a7e678c66f8da009bd 101 Pfam PF00699 Urease beta subunit 3 99 2.4E-46 T 29-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS03625 8aede6486d6378f304653a8f2415ea31 538 Pfam PF01039 Carboxyl transferase domain 49 514 5.2E-115 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS03625 8aede6486d6378f304653a8f2415ea31 538 Gene3D G3DSA:3.90.226.10 9 273 1.5E-54 T 29-03-2018 AM474_RS03625 8aede6486d6378f304653a8f2415ea31 538 SUPERFAMILY SSF52096 277 535 2.56E-74 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS03625 8aede6486d6378f304653a8f2415ea31 538 Gene3D G3DSA:3.90.226.10 274 532 2.8E-58 T 29-03-2018 AM474_RS03625 8aede6486d6378f304653a8f2415ea31 538 SUPERFAMILY SSF52096 33 269 2.85E-58 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.18 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 SUPERFAMILY SSF75217 1 150 7.33E-47 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 Pfam PF00588 SpoU rRNA Methylase family 2 142 3.3E-32 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 150 6.3E-58 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 PIRSF PIRSF029256 1 153 7.9E-68 T 29-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM474_RS17225 6b12e4963fd12fc260ec24c3d4f2f8bc 153 Gene3D G3DSA:3.40.1280.10 1 153 8.9E-39 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS17540 4fb2fcab1a2724bba55d318d23fbe346 134 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 1.0E-24 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM474_RS17540 4fb2fcab1a2724bba55d318d23fbe346 134 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.986 T 29-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM474_RS17540 4fb2fcab1a2724bba55d318d23fbe346 134 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 1.7E-33 T 29-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AM474_RS17540 4fb2fcab1a2724bba55d318d23fbe346 134 SUPERFAMILY SSF141734 4 120 4.84E-49 T 29-03-2018 AM474_RS14150 25e18581c5376022eef02ae8f3b4aef3 166 Pfam PF03168 Late embryogenesis abundant protein 54 146 1.3E-21 T 29-03-2018 IPR004864 Late embryogenesis abundant protein, LEA-14 AM474_RS14150 25e18581c5376022eef02ae8f3b4aef3 166 SUPERFAMILY SSF117070 12 153 1.02E-30 T 29-03-2018 AM474_RS14150 25e18581c5376022eef02ae8f3b4aef3 166 SMART SM00769 34 154 2.0E-46 T 29-03-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 AM474_RS14150 25e18581c5376022eef02ae8f3b4aef3 166 Gene3D G3DSA:2.60.40.10 32 147 3.7E-15 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS14465 8e104a363483c818ec0627d134c9a387 180 Gene3D G3DSA:2.160.10.10 1 178 1.3E-38 T 29-03-2018 AM474_RS14465 8e104a363483c818ec0627d134c9a387 180 SUPERFAMILY SSF51161 3 173 1.07E-43 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS14465 8e104a363483c818ec0627d134c9a387 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 1.8E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS14465 8e104a363483c818ec0627d134c9a387 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 45 1.3E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 Pfam PF08544 GHMP kinases C terminal 203 254 5.4E-5 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 278 3.5E-84 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 Pfam PF00288 GHMP kinases N terminal domain 87 144 1.3E-10 T 29-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 271 33.241 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 Gene3D G3DSA:3.30.70.890 162 279 5.1E-21 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 PIRSF PIRSF010376 3 279 1.6E-86 T 29-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 SUPERFAMILY SSF55060 160 277 7.67E-33 T 29-03-2018 IPR013750 GHMP kinase, C-terminal domain AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 Gene3D G3DSA:3.30.230.10 5 160 3.6E-47 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS19965 779ade891a023a12d2a29ad1550d71bc 282 SUPERFAMILY SSF54211 7 158 1.97E-47 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS16075 ffe24c214affeab2dbfc90d10437fe4a 130 Gene3D G3DSA:3.30.1050.10 10 124 5.1E-16 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS16075 ffe24c214affeab2dbfc90d10437fe4a 130 SUPERFAMILY SSF55718 11 116 4.71E-5 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 258 44.824 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 SUPERFAMILY SSF56281 3 258 5.24E-73 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 Pfam PF00753 Metallo-beta-lactamase superfamily 14 170 1.7E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 258 1.1E-105 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 PIRSF PIRSF005457 1 258 4.7E-104 T 29-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 Gene3D G3DSA:3.60.15.10 1 258 3.9E-74 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 SMART SM00849 12 170 3.6E-38 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS28345 5bd7398071c4f9c1d2729e5e648a437f 258 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 258 2.5E-26 T 29-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AM474_RS30740 aa1002f991cb80e509e757291e7fa51f 325 Pfam PF12833 Helix-turn-helix domain 246 322 3.4E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS30740 aa1002f991cb80e509e757291e7fa51f 325 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 53 193 1.8E-10 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS30740 aa1002f991cb80e509e757291e7fa51f 325 Gene3D G3DSA:1.10.10.60 241 323 9.2E-10 T 29-03-2018 AM474_RS30740 aa1002f991cb80e509e757291e7fa51f 325 SUPERFAMILY SSF46689 275 324 4.48E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30740 aa1002f991cb80e509e757291e7fa51f 325 SMART SM00342 239 321 4.9E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS24940 17665b5952033ddb053bb6446723774e 274 Pfam PF01171 PP-loop family 34 197 7.0E-14 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM474_RS24940 17665b5952033ddb053bb6446723774e 274 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 1 264 58.223 T 29-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AM474_RS24940 17665b5952033ddb053bb6446723774e 274 Gene3D G3DSA:3.40.50.620 3 222 1.9E-39 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS24940 17665b5952033ddb053bb6446723774e 274 PIRSF PIRSF004976 3 267 6.0E-71 T 29-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 AM474_RS24940 17665b5952033ddb053bb6446723774e 274 SUPERFAMILY SSF52402 10 228 2.07E-56 T 29-03-2018 AM474_RS21890 cbe26ea3e66fc186c9e73eed9ea3260a 303 Pfam PF08666 SAF domain 57 116 1.3E-7 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM474_RS21890 cbe26ea3e66fc186c9e73eed9ea3260a 303 SMART SM00858 56 116 1.6E-8 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM474_RS21890 cbe26ea3e66fc186c9e73eed9ea3260a 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 120 234 6.0E-30 T 29-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AM474_RS21890 cbe26ea3e66fc186c9e73eed9ea3260a 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 300 1.6E-63 T 29-03-2018 IPR017592 Pilus assembly, Flp-type CpaB AM474_RS21890 cbe26ea3e66fc186c9e73eed9ea3260a 303 Gene3D G3DSA:3.90.1210.10 54 117 9.7E-9 T 29-03-2018 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 Pfam PF03466 LysR substrate binding domain 91 289 4.0E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 Gene3D G3DSA:3.40.190.10 180 262 2.0E-20 T 29-03-2018 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 Gene3D G3DSA:3.40.190.10 90 179 1.0E-26 T 29-03-2018 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 SUPERFAMILY SSF53850 91 290 2.29E-41 T 29-03-2018 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.6E-22 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 Gene3D G3DSA:1.10.10.10 1 86 4.4E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29305 ea34b60d9ca0bad84a639785883b2cd1 306 SUPERFAMILY SSF46785 1 84 1.18E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 7.4E-7 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 PRINTS PR00173 Glutamate-aspartate symporter signature 253 272 7.4E-7 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 7.4E-7 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 7.4E-7 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 Pfam PF03553 Na+/H+ antiporter family 151 435 1.6E-77 T 29-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 AM474_RS01110 0908e4fdf0e2a8470031cde2c8830c88 441 Pfam PF13726 Na+-H+ antiporter family 2 88 2.5E-32 T 29-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal AM474_RS05770 8ea3276399629038e7847bc757167839 67 Pfam PF11745 Protein of unknown function (DUF3304) 8 38 3.8E-6 T 29-03-2018 IPR021733 Protein of unknown function DUF3304 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 121 130 2.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.0E-19 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 Pfam PF00255 Glutathione peroxidase 4 110 3.9E-38 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 SUPERFAMILY SSF52833 4 159 7.97E-57 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 PIRSF PIRSF000303 1 160 1.9E-60 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM474_RS22855 331d11dac7fddef80b58f05229102e4f 160 Gene3D G3DSA:3.40.30.10 2 160 6.3E-43 T 29-03-2018 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:3.40.50.620 3 216 2.8E-65 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 12 363 5.4E-139 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 Pfam PF03054 tRNA methyl transferase 12 363 1.7E-136 T 29-03-2018 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:2.30.30.280 217 284 1.9E-26 T 29-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 SUPERFAMILY SSF52402 11 248 9.7E-57 T 29-03-2018 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 Gene3D G3DSA:2.40.30.10 286 370 1.3E-26 T 29-03-2018 AM474_RS00970 f94ed94035e97b67731049f7ef0eab6a 375 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 364 40.523 T 29-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 AM474_RS18315 6cba3dea974127e564b5273b2c8b616b 248 Gene3D G3DSA:3.30.565.40 25 153 2.5E-25 T 29-03-2018 AM474_RS18315 6cba3dea974127e564b5273b2c8b616b 248 Gene3D G3DSA:3.90.640.20 154 248 8.3E-14 T 29-03-2018 IPR021729 Domain of unknown function DUF3298 AM474_RS00570 255059fc1e19c155866accfa5c9720b2 496 Gene3D G3DSA:3.40.605.10 4 280 6.0E-78 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS00570 255059fc1e19c155866accfa5c9720b2 496 SUPERFAMILY SSF53720 4 493 6.15E-142 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS00570 255059fc1e19c155866accfa5c9720b2 496 Gene3D G3DSA:3.40.309.10 281 476 2.6E-64 T 29-03-2018 AM474_RS00570 255059fc1e19c155866accfa5c9720b2 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS00570 255059fc1e19c155866accfa5c9720b2 496 Pfam PF00171 Aldehyde dehydrogenase family 22 490 1.1E-138 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 Gene3D G3DSA:1.10.10.60 199 241 2.7E-11 T 29-03-2018 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 Gene3D G3DSA:1.10.10.60 242 299 2.4E-12 T 29-03-2018 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 SUPERFAMILY SSF46689 191 242 7.44E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 Pfam PF12833 Helix-turn-helix domain 215 293 1.3E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 SMART SM00342 208 291 2.5E-24 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 Gene3D G3DSA:3.40.50.880 3 198 1.1E-36 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 SUPERFAMILY SSF52317 15 174 5.73E-33 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21205 1a7e7efe40373ea8cc2990bc1d032154 299 SUPERFAMILY SSF46689 244 295 2.02E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 SUPERFAMILY SSF53850 85 290 1.99E-34 T 29-03-2018 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 Gene3D G3DSA:1.10.10.10 1 89 6.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 SUPERFAMILY SSF46785 4 86 5.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 Gene3D G3DSA:3.40.190.10 178 259 7.5E-18 T 29-03-2018 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 Gene3D G3DSA:3.40.190.10 94 177 1.2E-16 T 29-03-2018 AM474_RS10415 9c0ed1fc1870df0abb22a2ba9d3f3cb2 296 Pfam PF03466 LysR substrate binding domain 92 289 2.6E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS09440 d66f9e521dd66fbbdea06f61dd50e94b 263 Pfam PF00005 ABC transporter 23 162 1.2E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS09440 d66f9e521dd66fbbdea06f61dd50e94b 263 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS09440 d66f9e521dd66fbbdea06f61dd50e94b 263 SMART SM00382 32 213 2.0E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS09440 d66f9e521dd66fbbdea06f61dd50e94b 263 Gene3D G3DSA:3.40.50.300 1 241 5.9E-60 T 29-03-2018 AM474_RS09440 d66f9e521dd66fbbdea06f61dd50e94b 263 SUPERFAMILY SSF52540 7 219 6.02E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03065 08e8e2130af0ca4bd2a9b9ccf1141516 229 Pfam PF11444 Protein of unknown function (DUF2895) 6 206 2.4E-90 T 29-03-2018 IPR021548 Protein of unknown function DUF2895 AM474_RS03065 08e8e2130af0ca4bd2a9b9ccf1141516 229 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 4 207 9.5E-96 T 29-03-2018 IPR021548 Protein of unknown function DUF2895 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 325 738 2.6E-126 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 ProSitePatterns PS00885 EPSP synthase signature 2. 652 670 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 321 740 33.596 T 29-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Gene3D G3DSA:3.65.10.10 532 744 2.9E-52 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Pfam PF02153 Prephenate dehydrogenase 29 285 2.6E-73 T 29-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 ProSitePatterns PS00104 EPSP synthase signature 1. 400 414 - T 29-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 SUPERFAMILY SSF55205 316 738 3.11E-133 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Gene3D G3DSA:1.10.3660.10 195 310 3.3E-33 T 29-03-2018 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Gene3D G3DSA:3.40.50.720 11 186 2.5E-29 T 29-03-2018 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 SUPERFAMILY SSF51735 16 183 1.22E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 SUPERFAMILY SSF48179 189 295 1.12E-34 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 318 731 2.8E-119 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS05050 503bb2b0b7917a84fa1aff34dbffaf3e 746 Gene3D G3DSA:3.65.10.10 332 531 6.0E-54 T 29-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM474_RS15730 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 19 86 1.2E-11 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM474_RS15730 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 133 181 1.8E-6 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM474_RS15730 f44971580c6d362425835051e79360cf 186 Pfam PF03729 Short repeat of unknown function (DUF308) 76 146 6.1E-15 T 29-03-2018 IPR005325 Protein of unknown function DUF308, membrane AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:1.20.5.710 3 32 3.9E-14 T 29-03-2018 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF54736 51 122 2.62E-24 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.996 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 SUPERFAMILY SSF48300 4 58 2.22E-15 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.9E-29 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 Gene3D G3DSA:3.30.1390.10 49 122 8.4E-30 T 29-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 2.5E-17 T 29-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 95 2.0E-13 T 29-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11210 3c65321985d4b2f3d82277a932b27a0a 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.3E-45 T 29-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Gene3D G3DSA:3.40.50.980 13 187 2.8E-39 T 29-03-2018 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Gene3D G3DSA:2.30.38.10 339 424 2.0E-21 T 29-03-2018 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Pfam PF00501 AMP-binding enzyme 22 430 1.1E-84 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Gene3D G3DSA:3.30.300.30 426 531 5.0E-17 T 29-03-2018 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Gene3D G3DSA:3.40.50.980 188 338 6.2E-30 T 29-03-2018 AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 514 4.4E-11 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS00330 adec55f1cb4fd2597c172f78de411824 543 SUPERFAMILY SSF56801 15 526 1.31E-126 T 29-03-2018 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 Pfam PF01084 Ribosomal protein S18 19 68 3.1E-25 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 29-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.9E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.9E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.9E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.9E-18 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 2.0E-22 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.983 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.5E-37 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 Gene3D G3DSA:4.10.640.10 1 76 2.7E-31 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18520 dbfded01c87925bee7d1bff9987c6438 76 SUPERFAMILY SSF46911 3 74 2.62E-29 T 29-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 329 352 15.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 283 304 2200.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 243 270 220.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 401 423 7.2 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 305 327 81.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 354 376 2200.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00710 378 400 110.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 Pfam PF05048 Periplasmic copper-binding protein (NosD) 288 438 6.0E-16 T 29-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SUPERFAMILY SSF51126 174 465 2.32E-38 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 SMART SM00722 262 422 9.3E-20 T 29-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 395 437 8.0E-7 T 29-03-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS07050 f1a2d8d05fac74290ef22908076938ca 543 Gene3D G3DSA:2.160.20.10 76 499 8.2E-87 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS08605 0cf9a6680c768239b96da0b035c9df28 253 Gene3D G3DSA:3.30.1380.10 44 227 1.0E-42 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM474_RS08605 0cf9a6680c768239b96da0b035c9df28 253 SUPERFAMILY SSF55166 23 227 6.8E-52 T 29-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 AM474_RS08605 0cf9a6680c768239b96da0b035c9df28 253 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 23 227 24.655 T 29-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AM474_RS08605 0cf9a6680c768239b96da0b035c9df28 253 Pfam PF01427 D-ala-D-ala dipeptidase 72 223 2.2E-21 T 29-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 SUPERFAMILY SSF53850 2 250 7.02E-65 T 29-03-2018 AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 248 3.1E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 SMART SM00062 31 250 3.1E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 Gene3D G3DSA:3.40.190.10 145 255 3.9E-13 T 29-03-2018 AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 Gene3D G3DSA:3.40.190.10 12 144 6.9E-36 T 29-03-2018 AM474_RS13165 53fc00c9f2b4dee952c6461f068d0789 256 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 273 310 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 32 467 2.5E-174 T 29-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 Gene3D G3DSA:3.90.1150.10 341 468 4.0E-33 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 SUPERFAMILY SSF53383 39 463 4.9E-115 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 Gene3D G3DSA:3.40.640.10 76 340 8.9E-69 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 PIRSF PIRSF000521 30 155 3.9E-4 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 PIRSF PIRSF000521 145 466 2.1E-29 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS31655 9f22f633b647f68a45d2397d241dcba7 469 Pfam PF00202 Aminotransferase class-III 49 463 2.7E-88 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF46894 136 233 5.39E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 Pfam PF00072 Response regulator receiver domain 8 120 5.5E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 SUPERFAMILY SSF52172 4 129 1.99E-42 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:1.10.10.10 127 238 8.7E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00862 156 232 1.3E-15 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 SMART SM00448 6 119 1.5E-43 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS05205 eb4aaa960397cf4ef27582c3eb7f9a31 242 Gene3D G3DSA:3.40.50.2300 2 126 2.0E-36 T 29-03-2018 AM474_RS16590 1b27bf52989a4af94c5a105e81af0a96 160 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.715 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AM474_RS16590 1b27bf52989a4af94c5a105e81af0a96 160 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 146 2.1E-42 T 29-03-2018 IPR003791 Protein of unknown function UPF0178 AM474_RS10000 60721cfc527b5a3edc9219e57027090c 153 Pfam PF00583 Acetyltransferase (GNAT) family 32 135 1.2E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS10000 60721cfc527b5a3edc9219e57027090c 153 Gene3D G3DSA:3.40.630.30 1 150 3.1E-25 T 29-03-2018 AM474_RS10000 60721cfc527b5a3edc9219e57027090c 153 SUPERFAMILY SSF55729 1 146 1.51E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 SUPERFAMILY SSF48452 38 203 1.37E-24 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 114 160 7.0E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 141 174 5.2E-4 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 37 70 0.003 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 SMART SM00028 71 104 42.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 32 92 4.3E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 93 113 8.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 240 4.7E-74 T 29-03-2018 IPR013360 Pilus biogenesis/stability type IV, PilW AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Gene3D G3DSA:1.25.40.10 161 246 5.5E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13424 Tetratricopeptide repeat 105 172 1.5E-8 T 29-03-2018 AM474_RS08725 69dc5b9e5d5d9255d51f639eecef8626 252 Pfam PF13414 TPR repeat 47 82 8.4E-7 T 29-03-2018 AM474_RS06590 d243245aec86c699a165b8d264972dab 123 SMART SM00905 11 121 1.1E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS06590 d243245aec86c699a165b8d264972dab 123 Pfam PF02152 Dihydroneopterin aldolase 11 119 2.1E-25 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS06590 d243245aec86c699a165b8d264972dab 123 Gene3D G3DSA:3.30.1130.10 3 123 7.3E-30 T 29-03-2018 AM474_RS06590 d243245aec86c699a165b8d264972dab 123 SUPERFAMILY SSF55620 7 120 2.48E-30 T 29-03-2018 AM474_RS06590 d243245aec86c699a165b8d264972dab 123 TIGRFAM TIGR00526 folB_dom: FolB domain 8 119 1.5E-31 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.20.120.530 83 224 9.9E-30 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF46785 3 74 6.27E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Gene3D G3DSA:1.10.10.10 1 78 5.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00345 11 70 1.7E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.8E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.8E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SUPERFAMILY SSF48008 88 218 2.88E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF07729 FCD domain 90 213 2.0E-28 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 SMART SM00895 90 214 1.9E-21 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS14185 dcf7eb53c99b6fb3d96ce5c54e6ec3ff 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 4.2E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 56 90 6.0E-6 T 29-03-2018 IPR011096 FTP domain AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 SUPERFAMILY SSF55486 199 494 9.52E-89 T 29-03-2018 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:3.10.170.10 198 349 1.3E-44 T 29-03-2018 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:3.10.450.40 122 193 0.0018 T 29-03-2018 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF03413 Peptidase propeptide and YPEB domain 123 192 1.7E-8 T 29-03-2018 IPR025711 PepSY domain AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Gene3D G3DSA:1.10.390.10 350 498 1.4E-43 T 29-03-2018 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 419 435 5.8E-26 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 352 5.8E-26 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 357 368 5.8E-26 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 302 322 5.8E-26 T 29-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 348 492 5.5E-37 T 29-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 AM474_RS07980 d782dad6732da4d5f0adc35c2359f0f0 498 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 208 345 4.2E-34 T 29-03-2018 IPR013856 Peptidase M4 domain GO:0004222 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 SMART SM00471 67 271 8.8E-10 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 36 496 4.0E-108 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 Pfam PF01966 HD domain 71 136 9.1E-8 T 29-03-2018 IPR006674 HD domain AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 Gene3D G3DSA:1.10.3210.10 4 251 1.6E-53 T 29-03-2018 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 SUPERFAMILY SSF109604 240 429 1.66E-58 T 29-03-2018 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 SUPERFAMILY SSF109604 478 493 1.66E-58 T 29-03-2018 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 SUPERFAMILY SSF109604 170 203 1.66E-58 T 29-03-2018 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 SUPERFAMILY SSF109604 36 137 1.66E-58 T 29-03-2018 AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 Gene3D G3DSA:1.10.3410.10 252 387 6.5E-21 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AM474_RS24545 4a1f8a0d3c361a41fd6291b63d747886 498 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 2 498 45.176 T 29-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 Gene3D G3DSA:1.20.1250.20 4 197 2.1E-32 T 29-03-2018 AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 SUPERFAMILY SSF103473 1 199 2.49E-66 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 SUPERFAMILY SSF103473 463 488 2.49E-66 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 SUPERFAMILY SSF103473 245 415 2.49E-66 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 Gene3D G3DSA:1.20.1250.20 248 495 9.3E-30 T 29-03-2018 AM474_RS25645 7a9f16125078a4cc150810fdccc315eb 513 Pfam PF07690 Major Facilitator Superfamily 13 405 6.5E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS10860 1a805774afda2e1d68ee284eef85cb77 351 SUPERFAMILY SSF51412 103 349 1.13E-61 T 29-03-2018 AM474_RS10860 1a805774afda2e1d68ee284eef85cb77 351 SUPERFAMILY SSF51412 4 73 1.13E-61 T 29-03-2018 AM474_RS10860 1a805774afda2e1d68ee284eef85cb77 351 Pfam PF03060 Nitronate monooxygenase 5 348 8.2E-81 T 29-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM474_RS10860 1a805774afda2e1d68ee284eef85cb77 351 Gene3D G3DSA:3.20.20.70 1 351 9.5E-54 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF08245 Mur ligase middle domain 120 299 9.7E-28 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.40.1190.10 104 320 6.5E-51 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF51984 16 102 4.05E-29 T 29-03-2018 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF53244 319 468 8.79E-47 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.40.50.720 2 103 5.3E-17 T 29-03-2018 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF01225 Mur ligase family, catalytic domain 17 115 3.8E-27 T 29-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 472 43.794 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 410 8.7E-21 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 Gene3D G3DSA:3.90.190.20 321 470 9.5E-36 T 29-03-2018 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 SUPERFAMILY SSF53623 101 318 1.27E-74 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS21335 72cd9eeddaa81b9875c63e82b7bdbd70 480 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 466 9.8E-170 T 29-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS17025 9f947fdf8acd58bc326d4f7e8adb0e21 293 SUPERFAMILY SSF53448 1 288 4.98E-93 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS17025 9f947fdf8acd58bc326d4f7e8adb0e21 293 Gene3D G3DSA:3.90.550.10 4 292 1.5E-71 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS17025 9f947fdf8acd58bc326d4f7e8adb0e21 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 1.8E-162 T 29-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AM474_RS17025 9f947fdf8acd58bc326d4f7e8adb0e21 293 Pfam PF00483 Nucleotidyl transferase 4 240 1.9E-70 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 37.065 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 29-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 Gene3D G3DSA:3.30.1330.50 1 157 4.4E-75 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 1.6E-73 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 Pfam PF02542 YgbB family 1 154 2.5E-68 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS07495 e6ca6414b0b490c0e928c24fc2e72f04 157 SUPERFAMILY SSF69765 1 155 4.32E-67 T 29-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 SUPERFAMILY SSF53067 131 340 6.69E-15 T 29-03-2018 AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 SUPERFAMILY SSF53067 13 78 6.69E-15 T 29-03-2018 AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 Pfam PF02543 Carbamoyltransferase N-terminus 4 337 9.1E-51 T 29-03-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 Pfam PF16861 Carbamoyltransferase C-terminus 390 559 5.1E-53 T 29-03-2018 IPR031730 Carbamoyltransferase, C-terminal AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.90.870.10 417 564 0.0015 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.30.420.40 1 151 5.3E-25 T 29-03-2018 AM474_RS29665 410026703b88e2de2d8be90864d855a8 574 Gene3D G3DSA:3.30.420.40 180 317 2.0E-5 T 29-03-2018 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 Gene3D G3DSA:1.10.10.60 3 76 1.8E-19 T 29-03-2018 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 SUPERFAMILY SSF48498 96 221 7.12E-34 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS13570 86cae677684d81e9ad523f9887608873 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 2.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 6.2E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 Gene3D G3DSA:1.10.357.10 77 222 1.6E-17 T 29-03-2018 AM474_RS13570 86cae677684d81e9ad523f9887608873 222 SUPERFAMILY SSF46689 17 91 1.03E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.150.20 82 141 3.6E-14 T 29-03-2018 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 31.777 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.3E-18 T 29-03-2018 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF50249 2 63 5.71E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 73 92 0.72 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 SMART SM00278 108 127 0.017 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:2.40.50.140 2 55 6.0E-28 T 29-03-2018 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.8.10 155 200 4.9E-16 T 29-03-2018 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Pfam PF07499 RuvA, C-terminal domain 157 200 1.7E-15 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF46929 156 200 1.2E-10 T 29-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Gene3D G3DSA:1.10.340.30 56 81 0.017 T 29-03-2018 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 SUPERFAMILY SSF47781 66 137 2.54E-22 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 199 3.2E-61 T 29-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM474_RS23565 4430d897f9d60e4532dc991a68933bff 201 Pfam PF01330 RuvA N terminal domain 2 62 1.7E-22 T 29-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM474_RS26955 834b3b3e1387f01de9fdfc8a02b52dc3 210 SUPERFAMILY SSF53474 4 182 6.29E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS26955 834b3b3e1387f01de9fdfc8a02b52dc3 210 Gene3D G3DSA:3.40.50.1820 13 123 2.6E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS26955 834b3b3e1387f01de9fdfc8a02b52dc3 210 Gene3D G3DSA:3.40.50.1820 124 209 3.5E-7 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 Gene3D G3DSA:3.40.50.2300 5 133 5.5E-21 T 29-03-2018 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 SMART SM00421 149 206 6.6E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 Pfam PF00072 Response regulator receiver domain 8 122 2.1E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 SUPERFAMILY SSF46894 140 208 5.44E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 Gene3D G3DSA:1.10.10.10 134 211 1.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.0E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 3.3E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 SUPERFAMILY SSF52172 5 141 4.27E-24 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS10275 002f0229a4ea720e500103244ef2db56 214 SMART SM00448 6 122 7.5E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29050 f1c15c935122296d21b9d1c9b202b9b6 332 Gene3D G3DSA:1.10.3470.10 48 327 4.1E-26 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS29050 f1c15c935122296d21b9d1c9b202b9b6 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 318 1.0E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 PIRSF PIRSF000303 1 184 3.8E-56 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 Pfam PF00255 Glutathione peroxidase 39 134 1.7E-22 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 Gene3D G3DSA:3.40.30.10 29 182 4.1E-31 T 29-03-2018 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 49 64 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 142 151 2.9E-9 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 47 64 2.9E-9 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 PRINTS PR01011 Glutathione peroxidase family signature 82 98 2.9E-9 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS25500 0f1df2cd200684dbc79c94598ad87fe5 184 SUPERFAMILY SSF52833 34 180 2.32E-42 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS02920 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 131 257 1.8E-49 T 29-03-2018 IPR021960 Protein of unknown function DUF3577 AM474_RS02920 884edf5b32244b06f1588bb7f8aa2b70 301 Pfam PF12101 Protein of unknown function (DUF3577) 5 123 3.1E-37 T 29-03-2018 IPR021960 Protein of unknown function DUF3577 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 Gene3D G3DSA:2.40.50.100 280 357 0.0012 T 29-03-2018 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 Pfam PF07238 PilZ domain 16 115 2.1E-11 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 Gene3D G3DSA:2.40.50.100 199 279 4.2E-5 T 29-03-2018 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 Gene3D G3DSA:2.40.10.220 9 122 1.1E-15 T 29-03-2018 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 Pfam PF13437 HlyD family secretion protein 262 357 2.5E-10 T 29-03-2018 AM474_RS07035 37a1d622418995c38c0f72b64094204c 389 SUPERFAMILY SSF141371 10 124 2.35E-10 T 29-03-2018 AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 Pfam PF00106 short chain dehydrogenase 6 196 7.6E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 Gene3D G3DSA:3.40.50.720 1 274 8.4E-55 T 29-03-2018 AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 159 0.0052 T 29-03-2018 AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.8E-15 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 SUPERFAMILY SSF51735 1 240 2.93E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03645 adba37ddaf82b619b2eb57edcf17409b 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 2.0E-35 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 Pfam PF00366 Ribosomal protein S17 13 79 8.8E-34 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 2.1E-13 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 2.1E-13 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 2.1E-13 T 29-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 1.7E-37 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 Gene3D G3DSA:2.40.50.140 8 85 8.4E-33 T 29-03-2018 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 25.574 T 29-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11125 808061b58de0b6b1035bd0d56932bf94 88 SUPERFAMILY SSF50249 9 85 3.47E-33 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 SUPERFAMILY SSF56601 174 561 8.54E-92 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 Gene3D G3DSA:3.40.710.10 223 579 9.9E-91 T 29-03-2018 AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 Gene3D G3DSA:3.90.1310.10 27 222 9.0E-43 T 29-03-2018 AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 546 1.7E-85 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 207 2.3E-17 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS21300 caba711651ba1e5785e9127c3ded9e86 579 SUPERFAMILY SSF56519 54 221 2.88E-44 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 29-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 20 328 3.5E-141 T 29-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 22 131 5.4E-23 T 29-03-2018 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 Gene3D G3DSA:3.40.190.10 132 331 8.7E-46 T 29-03-2018 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 SUPERFAMILY SSF53850 22 330 1.26E-88 T 29-03-2018 AM474_RS13335 2eaa629f78fe54de01bfde32abb4fddd 332 Pfam PF13531 Bacterial extracellular solute-binding protein 35 282 1.4E-44 T 29-03-2018 AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 Pfam PF08334 Type II secretion system (T2SS), protein G 37 146 7.3E-44 T 29-03-2018 IPR013545 Type II secretion system protein G AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 8.2E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 34 6.1E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 SUPERFAMILY SSF54523 41 147 1.67E-39 T 29-03-2018 AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 147 4.0E-66 T 29-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 3.7E-20 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 3.7E-20 T 29-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AM474_RS04740 0b76411f14006e53e682f84fec6b0309 148 Gene3D G3DSA:3.30.700.10 28 146 2.1E-36 T 29-03-2018 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 109 140 1.5E-11 T 29-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 SUPERFAMILY SSF55811 8 112 1.42E-23 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 Pfam PF00293 NUDIX domain 145 258 1.8E-22 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 Gene3D G3DSA:3.90.79.10 142 273 2.1E-37 T 29-03-2018 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 19 107 1.0E-11 T 29-03-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 Hamap MF_00297 NADH pyrophosphatase [nudC]. 8 273 50.526 T 29-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 ProSitePatterns PS00893 Nudix box signature. 175 196 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS28395 2acc56ceb797bfd4f555790b23a8abf4 278 SUPERFAMILY SSF55811 94 260 1.18E-45 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Gene3D G3DSA:2.30.110.10 13 214 1.1E-52 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 180 214 1.4E-9 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 122 1.3E-17 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 26 214 6.3E-45 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 PIRSF PIRSF000190 2 214 1.0E-60 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS10935 a5019dcbad4cb5e1a2ab1f1bb5bfb1a8 214 SUPERFAMILY SSF50475 13 214 2.16E-52 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS27495 e7118ad6f75ab4c06825fe0e62e6aea8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 158 1.8E-52 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS27495 e7118ad6f75ab4c06825fe0e62e6aea8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 1.2E-50 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS27495 e7118ad6f75ab4c06825fe0e62e6aea8 168 PIRSF PIRSF028301 1 168 3.7E-56 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 264 2.1E-99 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 Gene3D G3DSA:3.20.20.60 1 269 7.9E-74 T 29-03-2018 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.55 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 PIRSF PIRSF000388 1 272 2.3E-99 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 9.8E-93 T 29-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM474_RS27165 42de58b804f01ef02b766a2ccf32a7d3 273 SUPERFAMILY SSF51621 10 269 3.51E-94 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 Gene3D G3DSA:1.10.1660.10 3 57 1.2E-18 T 29-03-2018 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 Gene3D G3DSA:1.10.1660.10 58 138 9.6E-13 T 29-03-2018 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 SMART SM00422 5 72 1.1E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 Pfam PF13411 MerR HTH family regulatory protein 5 70 4.8E-17 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS00640 f00526b1c2ee42bc98f87e018f8103da 140 SUPERFAMILY SSF46955 5 120 4.4E-25 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF13183 4Fe-4S dicluster domain 367 422 3.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Gene3D G3DSA:3.30.70.20 414 642 4.8E-4 T 29-03-2018 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 SUPERFAMILY SSF142019 87 294 7.45E-57 T 29-03-2018 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Gene3D G3DSA:3.30.70.20 376 413 1.2E-9 T 29-03-2018 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 408 419 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF13375 RnfC Barrel sandwich hybrid domain 6 106 4.7E-32 T 29-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 SUPERFAMILY SSF46548 325 437 2.51E-17 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF10531 SLBB domain 290 337 7.8E-8 T 29-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Gene3D G3DSA:3.30.70.20 203 375 0.0013 T 29-03-2018 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 774 193.025 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 438 2.2E-192 T 29-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AM474_RS06870 f82e13d3bbb97d58345d018564d43b4c 774 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 275 2.3E-48 T 29-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS31345 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 217 1.1E-24 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31345 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 SUPERFAMILY SSF161098 7 200 5.23E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31345 ba52fb1dbbe7c2b3c25451193e9bfaf6 217 Gene3D G3DSA:1.10.3720.10 1 216 2.7E-40 T 29-03-2018 AM474_RS07095 578fface42d1c6eb19ca207c8ccf718e 339 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 1 327 63.692 T 29-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 AM474_RS07095 578fface42d1c6eb19ca207c8ccf718e 339 SUPERFAMILY SSF53448 8 255 1.39E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07095 578fface42d1c6eb19ca207c8ccf718e 339 Gene3D G3DSA:3.90.550.10 3 329 8.7E-34 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07095 578fface42d1c6eb19ca207c8ccf718e 339 Pfam PF00535 Glycosyl transferase family 2 10 172 3.8E-32 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 559 9.8E-109 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 267 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 466 483 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 402 420 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 8.0E-58 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 Pfam PF01019 Gamma-glutamyltranspeptidase 54 561 2.8E-158 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS12910 c0431d41077aea3b5a9dd0b721f45198 577 SUPERFAMILY SSF56235 34 564 4.82E-147 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS16230 1fccd6e3293b7cee4f3434398a7ff5c1 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.5E-29 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS16230 1fccd6e3293b7cee4f3434398a7ff5c1 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 22.188 T 29-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS16230 1fccd6e3293b7cee4f3434398a7ff5c1 78 Gene3D G3DSA:2.30.170.40 2 75 2.5E-30 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS16230 1fccd6e3293b7cee4f3434398a7ff5c1 78 SUPERFAMILY SSF143800 2 77 1.67E-31 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS16230 1fccd6e3293b7cee4f3434398a7ff5c1 78 Pfam PF00830 Ribosomal L28 family 3 61 1.2E-28 T 29-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 PIRSF PIRSF001365 3 301 3.8E-75 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.2E-9 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.2E-9 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.2E-9 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 6.3E-59 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 SUPERFAMILY SSF51569 3 292 6.38E-80 T 29-03-2018 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 SMART SM01130 6 294 7.1E-86 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS25325 40fd643fde036253d334574076d3a9b8 305 Gene3D G3DSA:3.20.20.70 3 298 4.2E-77 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS10535 4f87b0a55f8b3356b9052c454afb6f74 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 463 6.5E-219 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS10535 4f87b0a55f8b3356b9052c454afb6f74 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 442 1.2E-106 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS10535 4f87b0a55f8b3356b9052c454afb6f74 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS10535 4f87b0a55f8b3356b9052c454afb6f74 475 Gene3D G3DSA:1.20.210.10 4 473 3.8E-91 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS10535 4f87b0a55f8b3356b9052c454afb6f74 475 SUPERFAMILY SSF81442 10 466 2.62E-119 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS06190 65b325c22282cc967602a2393f4760e6 370 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 168 344 7.4E-16 T 29-03-2018 IPR026337 HEXXH motif domain AM474_RS09070 647e5fbaab59de166a6bff94d15a477e 272 Pfam PF00639 PPIC-type PPIASE domain 122 214 8.4E-21 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM474_RS09070 647e5fbaab59de166a6bff94d15a477e 272 SUPERFAMILY SSF109998 19 142 1.65E-5 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM474_RS09070 647e5fbaab59de166a6bff94d15a477e 272 SUPERFAMILY SSF54534 109 215 3.99E-22 T 29-03-2018 AM474_RS09070 647e5fbaab59de166a6bff94d15a477e 272 Gene3D G3DSA:3.10.50.40 111 240 6.4E-25 T 29-03-2018 AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 Pfam PF03471 Transporter associated domain 202 277 1.1E-20 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 63 120 0.0059 T 29-03-2018 IPR000644 CBS domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 Pfam PF00571 CBS domain 136 184 4.1E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 SMART SM01091 200 278 6.8E-30 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF56176 198 278 3.82E-22 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 SUPERFAMILY SSF54631 60 198 1.64E-31 T 29-03-2018 AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 72 121 13.0 T 29-03-2018 IPR000644 CBS domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 SMART SM00116 136 184 0.64 T 29-03-2018 IPR000644 CBS domain AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.10.580.10 42 190 1.1E-30 T 29-03-2018 AM474_RS09790 58f0a5558dacd35b0f635011e648773b 279 Gene3D G3DSA:3.30.465.10 191 278 1.9E-25 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Pfam PF05860 haemagglutination activity domain 134 249 1.7E-21 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Gene3D G3DSA:2.160.20.10 130 449 4.0E-38 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Gene3D G3DSA:2.160.20.10 1054 1305 0.045 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Gene3D G3DSA:2.160.20.10 1332 1689 0.0026 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Gene3D G3DSA:2.160.20.10 695 1011 1.9E-13 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 SMART SM00912 133 249 8.3E-30 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Gene3D G3DSA:2.160.20.10 2461 2797 0.0021 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 3968 4077 6.9E-41 T 29-03-2018 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 170 245 1.5E-21 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 SUPERFAMILY SSF51126 826 980 6.59E-6 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 SUPERFAMILY SSF51126 142 414 8.47E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS22140 a4ba04fc943ac71e6c7539a18657ae79 4177 SUPERFAMILY SSF51126 470 497 8.47E-37 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS24925 fe0a9d5aa402161ede9ae88769c21f82 95 SUPERFAMILY SSF53098 39 92 3.41E-6 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS24925 fe0a9d5aa402161ede9ae88769c21f82 95 Pfam PF13333 Integrase core domain 55 88 2.1E-7 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM474_RS24925 fe0a9d5aa402161ede9ae88769c21f82 95 Gene3D G3DSA:3.30.420.10 15 95 2.3E-7 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS10725 79042ed5f93af6f3b6f21400adc89a10 187 Gene3D G3DSA:3.40.50.880 2 187 4.1E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS10725 79042ed5f93af6f3b6f21400adc89a10 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 184 1.1E-65 T 29-03-2018 IPR006286 Peptidase C56, PfpI AM474_RS10725 79042ed5f93af6f3b6f21400adc89a10 187 Pfam PF01965 DJ-1/PfpI family 8 180 4.5E-39 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS10725 79042ed5f93af6f3b6f21400adc89a10 187 SUPERFAMILY SSF52317 7 183 3.15E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.891 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 Pfam PF00831 Ribosomal L29 protein 4 59 3.1E-23 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.3E-21 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 29-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 SUPERFAMILY SSF46561 1 61 1.44E-21 T 29-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11130 3cab79791998fd7a72b4a131eb8f6227 63 Gene3D G3DSA:1.10.287.310 1 63 4.0E-23 T 29-03-2018 AM474_RS19280 48c7ca033e33c1815688dc0c2430068d 101 SUPERFAMILY SSF101386 1 99 2.94E-30 T 29-03-2018 AM474_RS19280 48c7ca033e33c1815688dc0c2430068d 101 Gene3D G3DSA:1.10.287.1080 1 97 2.4E-20 T 29-03-2018 AM474_RS19280 48c7ca033e33c1815688dc0c2430068d 101 PIRSF PIRSF029826 1 101 1.4E-35 T 29-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AM474_RS19280 48c7ca033e33c1815688dc0c2430068d 101 Pfam PF12643 MazG-like family 31 94 1.9E-7 T 29-03-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 Gene3D G3DSA:3.30.560.10 151 503 1.9E-82 T 29-03-2018 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 Gene3D G3DSA:3.50.50.60 7 98 1.1E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 296 310 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 SUPERFAMILY SSF51905 51 329 4.02E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 SUPERFAMILY SSF51905 487 545 4.02E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 Gene3D G3DSA:4.10.450.10 99 150 2.4E-14 T 29-03-2018 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 SUPERFAMILY SSF54373 356 487 8.54E-31 T 29-03-2018 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 PIRSF PIRSF000137 34 381 9.6E-72 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 PIRSF PIRSF000137 363 545 3.7E-42 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 Pfam PF00732 GMC oxidoreductase 53 336 1.5E-60 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS29935 dbc06829f24e5f0feedf86886e34ffac 545 Pfam PF05199 GMC oxidoreductase 402 539 1.2E-37 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 SUPERFAMILY SSF50104 3 99 9.96E-34 T 29-03-2018 IPR008991 Translation protein SH3-like domain AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 4.0E-38 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 21.4 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 2.2E-25 T 29-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 SMART SM00739 3 30 1.2E-4 T 29-03-2018 IPR005824 KOW AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 Pfam PF00467 KOW motif 7 31 4.6E-6 T 29-03-2018 IPR005824 KOW AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 Gene3D G3DSA:2.30.30.30 2 92 1.5E-30 T 29-03-2018 IPR014722 Ribosomal protein L2 domain 2 AM474_RS11115 37595350c8aa8d61a6ff875d96ca0d9e 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 29-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 SUPERFAMILY SSF46955 2 108 2.49E-25 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 SMART SM00422 2 72 1.1E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 SUPERFAMILY SSF55136 120 269 1.05E-32 T 29-03-2018 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 SMART SM00871 120 270 1.4E-33 T 29-03-2018 IPR010499 Bacterial transcription activator, effector binding AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 Gene3D G3DSA:1.10.1660.10 1 57 9.0E-20 T 29-03-2018 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 Pfam PF13411 MerR HTH family regulatory protein 3 68 5.8E-16 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 Gene3D G3DSA:3.20.80.10 118 269 2.6E-40 T 29-03-2018 IPR011256 Regulatory factor, effector binding domain AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 Gene3D G3DSA:1.10.1660.10 58 117 3.3E-4 T 29-03-2018 AM474_RS18810 7629b26fcfe46455acf60075e5f13f46 270 Pfam PF14526 Integron-associated effector binding protein 123 269 1.4E-37 T 29-03-2018 IPR029441 Integron-associated effector binding protein AM474_RS22770 90442231639d15ab62bc8044c3443f0b 233 SMART SM00990 75 189 4.5E-14 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AM474_RS22770 90442231639d15ab62bc8044c3443f0b 233 Pfam PF08774 VRR-NUC domain 125 178 5.1E-6 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AM474_RS21965 5845df0dbfc8ba3142a2e9d37790e97c 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 131 310 9.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21965 5845df0dbfc8ba3142a2e9d37790e97c 538 SMART SM00283 85 343 6.7E-46 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21965 5845df0dbfc8ba3142a2e9d37790e97c 538 SUPERFAMILY SSF58104 77 347 2.62E-56 T 29-03-2018 AM474_RS21965 5845df0dbfc8ba3142a2e9d37790e97c 538 Gene3D G3DSA:1.10.287.950 102 311 9.9E-44 T 29-03-2018 AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 Pfam PF00106 short chain dehydrogenase 14 202 1.7E-57 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 SUPERFAMILY SSF51735 11 268 2.44E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 193 2.1E-4 T 29-03-2018 AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 6.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.6E-9 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.2E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09545 1f5ff43e3ee531526e127d9da1cc1400 278 Gene3D G3DSA:3.40.50.720 2 274 1.3E-64 T 29-03-2018 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 216 1.6E-22 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Gene3D G3DSA:2.40.110.10 119 215 6.3E-34 T 29-03-2018 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Gene3D G3DSA:1.20.140.10 216 381 1.2E-33 T 29-03-2018 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Gene3D G3DSA:1.10.540.10 1 118 2.3E-24 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 377 2.1E-16 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 118 1.4E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 SUPERFAMILY SSF47203 228 379 4.19E-18 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23965 5becda78b0cb68e082b251599b2548a9 381 SUPERFAMILY SSF56645 9 239 3.01E-68 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 SUPERFAMILY SSF46689 211 256 1.43E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 Pfam PF12833 Helix-turn-helix domain 180 256 8.6E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 1.1E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 1.1E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 Gene3D G3DSA:1.10.10.60 155 212 2.4E-10 T 29-03-2018 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 SUPERFAMILY SSF51182 16 183 6.23E-15 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 SMART SM00342 174 256 3.6E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 Gene3D G3DSA:2.60.120.10 6 93 1.2E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 Gene3D G3DSA:1.10.10.60 213 267 1.8E-12 T 29-03-2018 AM474_RS21975 68e77b84c6704a30530e818d76d67923 267 Pfam PF02311 AraC-like ligand binding domain 21 99 1.3E-11 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS06595 451706c194a580dc049d7c1b2a7d66e3 103 Pfam PF06844 Protein of unknown function (DUF1244) 32 97 2.7E-38 T 29-03-2018 IPR023163 SMc04008-like domain AM474_RS06595 451706c194a580dc049d7c1b2a7d66e3 103 Gene3D G3DSA:1.10.3340.10 6 88 9.3E-44 T 29-03-2018 IPR023163 SMc04008-like domain AM474_RS06595 451706c194a580dc049d7c1b2a7d66e3 103 SUPERFAMILY SSF158757 5 82 4.05E-38 T 29-03-2018 IPR023163 SMc04008-like domain AM474_RS18715 70328869a203999776d4e26e985976be 989 Gene3D G3DSA:2.170.130.10 160 341 1.6E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS18715 70328869a203999776d4e26e985976be 989 SMART SM00965 97 148 1.2E-11 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS18715 70328869a203999776d4e26e985976be 989 Gene3D G3DSA:2.40.170.20 342 989 2.6E-69 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS18715 70328869a203999776d4e26e985976be 989 Pfam PF00593 TonB dependent receptor 455 987 8.1E-41 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS18715 70328869a203999776d4e26e985976be 989 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 972 989 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS18715 70328869a203999776d4e26e985976be 989 SUPERFAMILY SSF56935 336 605 4.0E-86 T 29-03-2018 AM474_RS18715 70328869a203999776d4e26e985976be 989 SUPERFAMILY SSF56935 702 845 4.0E-86 T 29-03-2018 AM474_RS18715 70328869a203999776d4e26e985976be 989 SUPERFAMILY SSF56935 877 989 4.0E-86 T 29-03-2018 AM474_RS18715 70328869a203999776d4e26e985976be 989 SUPERFAMILY SSF56935 161 308 4.0E-86 T 29-03-2018 AM474_RS18715 70328869a203999776d4e26e985976be 989 Pfam PF07715 TonB-dependent Receptor Plug Domain 178 281 3.6E-17 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS18715 70328869a203999776d4e26e985976be 989 Gene3D G3DSA:2.60.40.1610 109 159 2.1E-4 T 29-03-2018 IPR010679 Domain of unknown function DUF1254 AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 Pfam PF03466 LysR substrate binding domain 90 293 7.0E-44 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:3.40.190.10 89 177 3.3E-8 T 29-03-2018 AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 SUPERFAMILY SSF53850 91 296 4.5E-43 T 29-03-2018 AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:1.10.10.10 3 84 7.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 Gene3D G3DSA:3.40.190.10 178 264 1.7E-25 T 29-03-2018 AM474_RS13975 0b7f2ff26a1428c11a4b0df38405f49f 312 SUPERFAMILY SSF46785 4 85 2.1E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 SUPERFAMILY SSF46689 2 78 3.05E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 SUPERFAMILY SSF53697 97 266 1.82E-16 T 29-03-2018 AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 72 2.3E-11 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 Gene3D G3DSA:3.40.50.10490 89 273 2.4E-16 T 29-03-2018 AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 Pfam PF01380 SIS domain 135 253 1.5E-12 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS15215 a1929cc88c713ad1720a5ce92a8705d9 285 Gene3D G3DSA:1.10.10.10 1 78 2.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 SMART SM00842 10 196 7.4E-107 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 7.8E-159 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 2 187 1.7E-40 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 9 197 4.12E-63 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.3E-32 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 11 193 2.6E-11 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Pfam PF14450 Cell division protein FtsA 207 374 4.0E-26 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 255 352 1.3E-22 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Gene3D G3DSA:3.30.420.40 197 254 5.8E-8 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 417 31.729 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 SUPERFAMILY SSF53067 198 378 6.68E-52 T 29-03-2018 AM474_RS21350 48e70e2a11407bbdc893c9d471f716c4 417 PIRSF PIRSF003101 1 417 1.3E-161 T 29-03-2018 IPR020823 Cell division protein FtsA GO:0007049 AM474_RS21040 818fc5c5e602fe7141efa0eb8c3e5417 149 Gene3D G3DSA:1.25.40.10 1 128 7.0E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS10190 2d796d62d0cc59b181a3dc64464f35ab 234 Pfam PF00005 ABC transporter 24 178 2.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10190 2d796d62d0cc59b181a3dc64464f35ab 234 SUPERFAMILY SSF52540 4 223 2.77E-48 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10190 2d796d62d0cc59b181a3dc64464f35ab 234 Gene3D G3DSA:3.40.50.300 1 226 1.3E-49 T 29-03-2018 AM474_RS10190 2d796d62d0cc59b181a3dc64464f35ab 234 SMART SM00382 30 226 2.4E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS14440 3d6a61c4751d178f3ef6c5614f3645bd 570 Gene3D G3DSA:3.90.1580.10 125 357 6.2E-24 T 29-03-2018 AM474_RS14440 3d6a61c4751d178f3ef6c5614f3645bd 570 SUPERFAMILY SSF56436 127 186 2.59E-27 T 29-03-2018 IPR016187 C-type lectin fold AM474_RS14440 3d6a61c4751d178f3ef6c5614f3645bd 570 SUPERFAMILY SSF56436 214 360 2.59E-27 T 29-03-2018 IPR016187 C-type lectin fold AM474_RS14440 3d6a61c4751d178f3ef6c5614f3645bd 570 Pfam PF03781 Sulfatase-modifying factor enzyme 1 127 359 3.9E-30 T 29-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AM474_RS07430 4c8a04745a07ea962dd2b7858ace3c21 356 SUPERFAMILY SSF102405 68 263 6.87E-47 T 29-03-2018 AM474_RS07430 4c8a04745a07ea962dd2b7858ace3c21 356 Pfam PF03641 Possible lysine decarboxylase 131 263 3.5E-29 T 29-03-2018 IPR031100 LOG family AM474_RS07430 4c8a04745a07ea962dd2b7858ace3c21 356 Gene3D G3DSA:3.40.50.450 61 350 3.3E-78 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 SUPERFAMILY SSF53067 63 108 3.24E-25 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 SUPERFAMILY SSF53067 138 307 3.24E-25 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 SUPERFAMILY SSF53067 3 36 3.24E-25 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 363 40.839 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 Gene3D G3DSA:3.30.420.40 207 363 9.3E-26 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 Gene3D G3DSA:3.30.420.40 1 180 2.5E-57 T 29-03-2018 AM474_RS11315 aad3c0d1757770da7269b711ab278abf 363 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 3 363 5.3E-169 T 29-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF88723 12 74 5.3E-17 T 29-03-2018 IPR029060 PIN domain-like AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF88723 110 161 5.3E-17 T 29-03-2018 IPR029060 PIN domain-like AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF02562 PhoH-like protein 254 450 1.4E-45 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 Pfam PF13638 PIN domain 15 160 2.0E-39 T 29-03-2018 IPR002716 PIN domain AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 SMART SM00670 13 147 4.8E-10 T 29-03-2018 IPR002716 PIN domain AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.1010 11 223 1.9E-36 T 29-03-2018 IPR029060 PIN domain-like AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 Gene3D G3DSA:3.40.50.300 252 456 2.5E-18 T 29-03-2018 AM474_RS09340 6094d8df2798aa55a7786a580c2f1742 463 SUPERFAMILY SSF52540 208 442 1.64E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 SUPERFAMILY SSF52540 8 194 1.77E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 Gene3D G3DSA:3.40.50.880 230 379 7.4E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 187 5.9E-13 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 SUPERFAMILY SSF52317 235 428 1.92E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 239 418 7.5E-31 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 10 430 4.2E-82 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 6 421 39.158 T 29-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AM474_RS25430 c584181d88abb7a7bf30c3eef4db4113 435 Gene3D G3DSA:3.40.50.300 1 181 6.9E-29 T 29-03-2018 AM474_RS28835 b5c52a78d2e07c2a6c60c395af35d2c3 546 SUPERFAMILY SSF53474 327 496 5.54E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28835 b5c52a78d2e07c2a6c60c395af35d2c3 546 SUPERFAMILY SSF53474 98 134 5.54E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28835 b5c52a78d2e07c2a6c60c395af35d2c3 546 SUPERFAMILY SSF53474 198 241 5.54E-11 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28835 b5c52a78d2e07c2a6c60c395af35d2c3 546 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 104 240 5.0E-6 T 29-03-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 AM474_RS28835 b5c52a78d2e07c2a6c60c395af35d2c3 546 Gene3D G3DSA:3.40.50.1820 102 513 1.2E-18 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 430 9.4E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 SMART SM00387 472 581 1.0E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 SUPERFAMILY SSF103190 108 193 1.16E-13 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 SMART SM00388 362 430 3.2E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 579 1.8E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 Gene3D G3DSA:3.30.450.20 186 391 4.5E-5 T 29-03-2018 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 SUPERFAMILY SSF55874 433 579 9.3E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 SUPERFAMILY SSF47384 358 431 1.96E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 Gene3D G3DSA:3.30.450.20 59 181 1.5E-20 T 29-03-2018 AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 PIRSF PIRSF036431 1 588 1.5E-192 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AM474_RS15185 4dfb8f7ae6305c4ec533082463915313 588 Gene3D G3DSA:3.30.565.10 392 580 1.9E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10355 8c3eda229ff97ac39fb8224e64ff259f 138 Gene3D G3DSA:3.10.129.10 1 136 6.1E-20 T 29-03-2018 AM474_RS10355 8c3eda229ff97ac39fb8224e64ff259f 138 Pfam PF03061 Thioesterase superfamily 45 121 8.7E-13 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS10355 8c3eda229ff97ac39fb8224e64ff259f 138 SUPERFAMILY SSF54637 7 132 6.08E-22 T 29-03-2018 IPR029069 HotDog domain AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56601 251 607 1.59E-102 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 8.1E-47 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 SUPERFAMILY SSF56519 56 250 4.19E-53 T 29-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.7E-237 T 29-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.90.1310.10 33 246 3.2E-55 T 29-03-2018 AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 Gene3D G3DSA:3.40.710.10 247 613 1.2E-96 T 29-03-2018 AM474_RS09885 9937c0ece1b69844aac6fbd8168be899 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 3.5E-75 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 29-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 29-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 PIRSF PIRSF000429 1 392 1.1E-131 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.2E-148 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 SUPERFAMILY SSF53901 3 270 4.32E-93 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 Gene3D G3DSA:3.40.47.10 152 267 4.3E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 Gene3D G3DSA:3.40.47.10 1 148 1.7E-36 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.2E-106 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 29-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 Gene3D G3DSA:3.40.47.10 268 390 1.6E-34 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 SUPERFAMILY SSF53901 272 390 3.95E-43 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29320 81f31c7808b848804905bb0d7040292c 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 2.2E-50 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS26440 42e3911d656a96874d25cf873e6b0112 159 SUPERFAMILY SSF50341 11 154 2.88E-42 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26440 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.30.30.40 96 142 1.5E-18 T 29-03-2018 AM474_RS26440 42e3911d656a96874d25cf873e6b0112 159 Pfam PF01584 CheW-like domain 15 151 7.2E-40 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26440 42e3911d656a96874d25cf873e6b0112 159 Gene3D G3DSA:2.40.50.180 32 95 2.2E-23 T 29-03-2018 AM474_RS26440 42e3911d656a96874d25cf873e6b0112 159 SMART SM00260 11 148 5.6E-53 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS24195 46db2c2bad3512d783e9606d18d98964 157 Pfam PF04343 Protein of unknown function, DUF488 29 136 1.9E-29 T 29-03-2018 IPR007438 Protein of unknown function DUF488 AM474_RS11495 1773fc8487e5eaa3b722c6ef21a0e45b 290 Pfam PF06995 Phage P2 GpU 158 285 3.0E-40 T 29-03-2018 IPR009734 Myoviridae, GpU AM474_RS11495 1773fc8487e5eaa3b722c6ef21a0e45b 290 PIRSF PIRSF011237 1 290 8.3E-159 T 29-03-2018 IPR014458 Uncharacterised protein family, phage P2-GpU-fusion AM474_RS11495 1773fc8487e5eaa3b722c6ef21a0e45b 290 Gene3D G3DSA:1.20.1480.30 19 121 5.8E-4 T 29-03-2018 AM474_RS04110 7fbe51315b6ed97d578dfc13be3ef054 332 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 1.5E-106 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM474_RS04110 7fbe51315b6ed97d578dfc13be3ef054 332 Gene3D G3DSA:3.40.50.300 51 191 1.3E-9 T 29-03-2018 AM474_RS04110 7fbe51315b6ed97d578dfc13be3ef054 332 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 331 39.228 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM474_RS04110 7fbe51315b6ed97d578dfc13be3ef054 332 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 313 9.7E-80 T 29-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 AM474_RS04110 7fbe51315b6ed97d578dfc13be3ef054 332 SUPERFAMILY SSF52540 53 191 6.11E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26920 ec31775e5d1cf902f3e41bef1b171559 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 3.1E-9 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component AM474_RS26940 ec31775e5d1cf902f3e41bef1b171559 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 3.1E-9 T 29-03-2018 IPR008621 Cbb3-type cytochrome oxidase component AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 SUPERFAMILY SSF52540 38 237 4.07E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 Gene3D G3DSA:3.40.50.300 1 259 5.6E-47 T 29-03-2018 AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 Gene3D G3DSA:2.70.50.60 260 396 1.2E-33 T 29-03-2018 AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 Pfam PF00005 ABC transporter 41 173 1.6E-20 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 Pfam PF14524 Wzt C-terminal domain 260 398 2.0E-33 T 29-03-2018 IPR029439 Wzt, C-terminal AM474_RS15505 9455c71f9a22beb5b98beaec5eeed049 421 SMART SM00382 50 239 1.8E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 171 344 7.8E-19 T 29-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 Gene3D G3DSA:2.30.130.10 1 74 1.2E-20 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 SUPERFAMILY SSF88697 4 75 3.73E-9 T 29-03-2018 IPR015947 PUA-like domain AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 Gene3D G3DSA:3.40.50.150 182 396 2.0E-39 T 29-03-2018 AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 Gene3D G3DSA:3.30.750.80 78 181 1.1E-29 T 29-03-2018 AM474_RS12950 8e194d8ecffa46268f7c63942157dbb4 398 SUPERFAMILY SSF53335 85 391 9.6E-73 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS31245 8620921c04c85475c750090892490b9d 254 Gene3D G3DSA:1.10.3720.10 7 252 5.0E-29 T 29-03-2018 AM474_RS31245 8620921c04c85475c750090892490b9d 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 246 3.3E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31245 8620921c04c85475c750090892490b9d 254 SUPERFAMILY SSF161098 56 239 1.7E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 Pfam PF00271 Helicase conserved C-terminal domain 237 335 1.0E-13 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 SMART SM00490 256 336 1.1E-15 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 Gene3D G3DSA:3.40.50.300 214 461 2.6E-31 T 29-03-2018 AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 145 154 - T 29-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.3E-17 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 SUPERFAMILY SSF52540 68 352 6.36E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 Gene3D G3DSA:3.40.50.300 10 207 1.6E-27 T 29-03-2018 AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 21 345 1.2E-67 T 29-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 SMART SM00487 19 223 3.2E-27 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 SUPERFAMILY SSF53271 562 686 2.56E-11 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS01595 bdedadf0a4b415560dad57484ac6fed1 692 Gene3D G3DSA:3.40.50.2020 553 692 6.2E-16 T 29-03-2018 AM474_RS01880 c23ce24e20fe5f1c11fe2fa3c992f486 242 SUPERFAMILY SSF56784 18 206 2.14E-17 T 29-03-2018 IPR023214 HAD-like domain AM474_RS01880 c23ce24e20fe5f1c11fe2fa3c992f486 242 Gene3D G3DSA:3.40.50.1000 14 221 8.5E-7 T 29-03-2018 IPR023214 HAD-like domain AM474_RS01880 c23ce24e20fe5f1c11fe2fa3c992f486 242 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 16 198 7.9E-29 T 29-03-2018 AM474_RS01880 c23ce24e20fe5f1c11fe2fa3c992f486 242 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 17 207 4.2E-31 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM474_RS01880 c23ce24e20fe5f1c11fe2fa3c992f486 242 Pfam PF12710 haloacid dehalogenase-like hydrolase 18 196 1.3E-26 T 29-03-2018 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Pfam PF02954 Bacterial regulatory protein, Fis family 438 478 2.0E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 461 1.6E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 461 481 1.6E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.10.60 389 481 3.7E-15 T 29-03-2018 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:1.10.8.60 319 388 1.9E-19 T 29-03-2018 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Gene3D G3DSA:3.40.50.300 142 318 1.3E-28 T 29-03-2018 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 SMART SM00382 166 310 8.6E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF46689 434 480 1.7E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52540 146 387 4.57E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Pfam PF06490 Flagellar regulatory protein FleQ 6 123 5.0E-30 T 29-03-2018 IPR010518 Flagellar regulatory FleQ AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 SUPERFAMILY SSF52172 3 188 8.08E-10 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS24390 8062ef7305f5987b36d342680dedd65b 490 Pfam PF00158 Sigma-54 interaction domain 146 313 3.8E-76 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS00120 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:1.10.150.290 198 253 2.6E-26 T 29-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS00120 41cfd6ad7948b94dc2aca7ab5ff1d681 275 SUPERFAMILY SSF53335 28 266 1.19E-26 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS00120 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 14 274 45.299 T 29-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 AM474_RS00120 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Pfam PF13649 Methyltransferase domain 47 136 2.3E-10 T 29-03-2018 AM474_RS00120 41cfd6ad7948b94dc2aca7ab5ff1d681 275 Gene3D G3DSA:3.40.50.150 11 197 7.6E-23 T 29-03-2018 AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 PIRSF PIRSF023956 1 218 1.2E-76 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 SUPERFAMILY SSF53335 1 216 9.66E-59 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 217 4.3E-87 T 29-03-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 Gene3D G3DSA:3.40.50.150 16 218 9.5E-23 T 29-03-2018 AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 40.211 T 29-03-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581 AM474_RS03340 350dd6a78cfcaf27c06b99da1d8609ee 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 4.7E-86 T 29-03-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 Gene3D G3DSA:2.40.50.100 43 140 3.3E-12 T 29-03-2018 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 SUPERFAMILY SSF111369 44 111 1.29E-9 T 29-03-2018 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 Pfam PF13533 Biotin-lipoyl like 43 88 8.9E-14 T 29-03-2018 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 Pfam PF13437 HlyD family secretion protein 200 279 2.1E-7 T 29-03-2018 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 Gene3D G3DSA:2.40.50.100 188 293 1.2E-4 T 29-03-2018 AM474_RS06140 3ea9b495f35e93dc5af066aea5e80b05 352 SUPERFAMILY SSF111369 180 247 4.58E-5 T 29-03-2018 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Gene3D G3DSA:3.40.50.980 27 199 4.7E-39 T 29-03-2018 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Gene3D G3DSA:3.30.300.30 439 555 7.8E-31 T 29-03-2018 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Gene3D G3DSA:2.30.38.10 352 436 3.2E-10 T 29-03-2018 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 3.4E-24 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 SUPERFAMILY SSF56801 28 543 2.35E-141 T 29-03-2018 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Pfam PF00501 AMP-binding enzyme 40 443 6.8E-75 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS00070 17682d9e950aa81ae9deb96d06fa2eaf 555 Gene3D G3DSA:3.40.50.980 200 351 7.1E-38 T 29-03-2018 AM474_RS30185 1211be5940de1c9ede4b4bac665e43aa 258 Pfam PF00326 Prolyl oligopeptidase family 48 239 9.6E-11 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM474_RS30185 1211be5940de1c9ede4b4bac665e43aa 258 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 84 114 - T 29-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 AM474_RS30185 1211be5940de1c9ede4b4bac665e43aa 258 SUPERFAMILY SSF53474 4 238 1.24E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS30185 1211be5940de1c9ede4b4bac665e43aa 258 Gene3D G3DSA:3.40.50.1820 29 243 1.4E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31440 ea677305a38510c3a5cac330bb2aa722 338 Pfam PF06996 Type VI secretion, TssG 20 317 9.9E-74 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS31440 ea677305a38510c3a5cac330bb2aa722 338 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 317 1.4E-82 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 35 50 2.6E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 147 161 2.6E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 195 213 2.6E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 PRINTS PR01755 Bacterial translocase SecF protein signature 227 242 2.6E-32 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 8 290 28.093 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 Pfam PF07549 SecD/SecF GG Motif 31 57 1.7E-12 T 29-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 36 279 7.6E-80 T 29-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 SUPERFAMILY SSF82866 70 286 1.12E-37 T 29-03-2018 AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 Pfam PF02355 Protein export membrane protein 109 287 8.2E-64 T 29-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 Gene3D G3DSA:1.20.1640.10 92 292 6.8E-29 T 29-03-2018 AM474_RS08800 bd1b2a0f501ffd85867221230380da16 306 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 92 276 1.7E-54 T 29-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM474_RS26070 d8ebf36195f31b265e54c014031b02fd 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS26070 d8ebf36195f31b265e54c014031b02fd 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.1E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS26070 d8ebf36195f31b265e54c014031b02fd 210 Gene3D G3DSA:1.10.357.10 21 210 2.6E-31 T 29-03-2018 AM474_RS26070 d8ebf36195f31b265e54c014031b02fd 210 SUPERFAMILY SSF46689 16 90 9.98E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS26070 d8ebf36195f31b265e54c014031b02fd 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 4.2E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 Gene3D G3DSA:2.150.10.10 252 479 6.2E-56 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 PIRSF PIRSF001205 1 479 2.6E-230 T 29-03-2018 IPR016294 Peptidase M10B GO:0004222|GO:0005509|GO:0005615|GO:0006508|GO:0008270 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 SUPERFAMILY SSF51120 256 478 4.32E-48 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 170 230 1.7E-5 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 Gene3D G3DSA:3.40.390.10 27 251 1.1E-38 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 SUPERFAMILY SSF55486 14 255 7.58E-71 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 365 383 - T 29-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 Pfam PF08548 Peptidase M10 serralysin C terminal 257 479 5.3E-82 T 29-03-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 PRINTS PR00313 NodO calcium binding signature 369 377 3.9E-12 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 PRINTS PR00313 NodO calcium binding signature 339 350 3.9E-12 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 PRINTS PR00313 NodO calcium binding signature 360 368 3.9E-12 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 PRINTS PR00313 NodO calcium binding signature 378 387 3.9E-12 T 29-03-2018 AM474_RS25300 66c51c1493f7c05ba625f6f1c62e85c0 479 SMART SM00235 78 241 4.9E-29 T 29-03-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 159 260 4.5E-29 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 Gene3D G3DSA:2.160.20.70 139 263 2.3E-31 T 29-03-2018 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 263 3.5E-94 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 SUPERFAMILY SSF63848 157 262 1.96E-28 T 29-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 263 27.536 T 29-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 AM474_RS05495 dd5ea76b29d1402cb530bbedeac3056c 263 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 7 112 7.7E-30 T 29-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 351 56.388 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 Gene3D G3DSA:3.90.1150.10 259 350 7.1E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 Gene3D G3DSA:3.90.1150.10 17 133 2.8E-10 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 Pfam PF00155 Aminotransferase class I and II 26 347 5.1E-54 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 Gene3D G3DSA:3.40.640.10 134 258 1.2E-22 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 SUPERFAMILY SSF53383 5 347 1.57E-75 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS21150 42d3e644848aca979fa5b10e0de3959f 351 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 348 5.5E-93 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF07517 SecA DEAD-like domain 6 402 2.5E-133 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81886 620 840 1.19E-81 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81886 892 904 1.19E-81 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 818 0.0 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.10.450.50 734 916 8.1E-53 T 29-03-2018 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 416 618 4.9E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 9 276 1.5E-59 T 29-03-2018 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 307 416 1.7E-6 T 29-03-2018 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 368 415 3.27E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF52540 5 228 3.27E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.1E-67 T 29-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:3.40.50.300 417 633 2.7E-56 T 29-03-2018 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SUPERFAMILY SSF81767 227 368 1.57E-40 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Gene3D G3DSA:1.10.3060.10 634 733 8.6E-33 T 29-03-2018 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.073 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SMART SM00957 6 402 0.0 T 29-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF01043 SecA preprotein cross-linking domain 232 358 3.8E-34 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 ProSitePatterns PS01312 SecA family signature. 500 515 - T 29-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 SMART SM00958 228 358 1.7E-74 T 29-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 Pfam PF02810 SEC-C motif 896 914 2.1E-10 T 29-03-2018 IPR004027 SEC-C motif AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 170 190 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 63 87 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 376 393 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 101 115 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 117 127 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 339 361 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS21380 fee3b0f55a421eff887964b9aecc6c6a 916 PRINTS PR00906 SecA protein signature 413 426 1.7E-70 T 29-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM474_RS24350 2c73557dc2cf766fa7d6f38e71c2d77a 388 Gene3D G3DSA:3.40.50.150 188 379 2.3E-29 T 29-03-2018 AM474_RS24350 2c73557dc2cf766fa7d6f38e71c2d77a 388 SUPERFAMILY SSF53335 59 377 6.09E-58 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS24350 2c73557dc2cf766fa7d6f38e71c2d77a 388 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 212 339 4.8E-25 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS24350 2c73557dc2cf766fa7d6f38e71c2d77a 388 Pfam PF05050 Methyltransferase FkbM domain 214 337 2.7E-15 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 460 3.1E-173 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 PIRSF PIRSF000167 3 459 4.0E-168 T 29-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 SUPERFAMILY SSF102114 5 448 1.27E-134 T 29-03-2018 AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 SMART SM00729 53 276 4.8E-51 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 Gene3D G3DSA:3.20.20.70 38 357 5.3E-48 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF06969 HemN C-terminal domain 369 435 5.0E-12 T 29-03-2018 IPR010723 HemN, C-terminal AM474_RS26860 47b85eb241fea8b0c719959ccf04bd57 460 Pfam PF04055 Radical SAM superfamily 58 232 3.4E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS20080 cd465d9bd289757131db3d8f1377aadb 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.5E-88 T 29-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM474_RS20080 cd465d9bd289757131db3d8f1377aadb 212 SUPERFAMILY SSF53271 3 206 4.33E-65 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS20080 cd465d9bd289757131db3d8f1377aadb 212 Gene3D G3DSA:3.40.50.2020 1 206 7.3E-60 T 29-03-2018 AM474_RS20080 cd465d9bd289757131db3d8f1377aadb 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.829 T 29-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM474_RS20080 cd465d9bd289757131db3d8f1377aadb 212 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 6.3E-63 T 29-03-2018 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 Gene3D G3DSA:3.40.800.10 12 315 1.8E-99 T 29-03-2018 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 ProSitePatterns PS01053 Arginase family signature. 241 262 - T 29-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 PRINTS PR00116 Arginase signature 238 267 2.2E-13 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 PRINTS PR00116 Arginase signature 125 140 2.2E-13 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 TIGRFAM TIGR01230 agmatinase: agmatinase 34 311 1.7E-63 T 29-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 PIRSF PIRSF036979 15 316 1.3E-102 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 SUPERFAMILY SSF52768 4 313 3.6E-100 T 29-03-2018 AM474_RS26165 4b4b9d42c55b70c7189458d818b84543 319 Pfam PF00491 Arginase family 39 310 5.6E-89 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS14295 d3fe0dbc3498b05ee7d83ccb3f940910 315 Pfam PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 179 276 5.1E-8 T 29-03-2018 IPR028917 Tox-GHH2 domain AM474_RS14295 d3fe0dbc3498b05ee7d83ccb3f940910 315 Pfam PF13665 Domain of unknown function (DUF4150) 21 133 9.1E-36 T 29-03-2018 IPR025425 Domain of unknown function DUF4150 AM474_RS09600 693f5972ee7a5aa29603fbb9df189d97 275 Gene3D G3DSA:1.10.3720.10 77 275 1.3E-27 T 29-03-2018 AM474_RS09600 693f5972ee7a5aa29603fbb9df189d97 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 274 2.3E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS09600 693f5972ee7a5aa29603fbb9df189d97 275 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 33 274 1.4E-88 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM474_RS09600 693f5972ee7a5aa29603fbb9df189d97 275 SUPERFAMILY SSF161098 80 264 3.79E-35 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:3.40.190.10 83 180 7.3E-21 T 29-03-2018 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:1.10.10.10 1 82 1.8E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 Gene3D G3DSA:3.40.190.10 181 261 5.4E-12 T 29-03-2018 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 SUPERFAMILY SSF53850 86 281 7.74E-30 T 29-03-2018 AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 Pfam PF03466 LysR substrate binding domain 85 281 1.1E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 SUPERFAMILY SSF46785 1 109 7.18E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10865 935ee2c19a6ac38216fe3e4cf4bfe679 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Gene3D G3DSA:1.10.10.60 573 642 2.9E-18 T 29-03-2018 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Gene3D G3DSA:3.30.450.20 233 322 3.8E-9 T 29-03-2018 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Pfam PF02954 Bacterial regulatory protein, Fis family 595 636 6.5E-14 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Pfam PF01590 GAF domain 73 194 2.5E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 619 639 1.6E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 602 619 1.6E-7 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 420 435 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 SUPERFAMILY SSF52540 346 571 3.88E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 357 370 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 SMART SM00382 353 496 1.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Gene3D G3DSA:1.10.8.60 519 572 6.1E-16 T 29-03-2018 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 SUPERFAMILY SSF55781 68 199 4.12E-9 T 29-03-2018 IPR029016 GAF domain-like AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Gene3D G3DSA:3.40.50.300 336 518 1.0E-19 T 29-03-2018 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 SUPERFAMILY SSF55785 235 313 1.44E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Gene3D G3DSA:3.30.450.40 29 217 1.8E-12 T 29-03-2018 IPR029016 GAF domain-like AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 SUPERFAMILY SSF46689 542 638 9.86E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09975 c0cc4b918524bde37768803eea6fd4b7 643 Pfam PF00158 Sigma-54 interaction domain 340 498 6.0E-59 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Gene3D G3DSA:3.30.450.20 440 587 9.5E-27 T 29-03-2018 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00062 41 262 1.4E-25 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Gene3D G3DSA:3.40.190.10 164 268 5.9E-4 T 29-03-2018 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00387 700 794 7.2E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00086 527 568 13.0 T 29-03-2018 IPR001610 PAC motif AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00086 396 436 2.5E-4 T 29-03-2018 IPR001610 PAC motif AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Gene3D G3DSA:3.30.450.20 305 439 3.0E-25 T 29-03-2018 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 260 1.0E-26 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SUPERFAMILY SSF55874 671 792 7.83E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SUPERFAMILY SSF55785 335 445 3.89E-23 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Gene3D G3DSA:3.30.565.10 588 793 1.1E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Gene3D G3DSA:3.40.190.10 25 163 9.4E-18 T 29-03-2018 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00091 448 521 0.12 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SMART SM00091 323 389 8.2E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Pfam PF08447 PAS fold 476 560 2.6E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Pfam PF08448 PAS fold 330 438 5.3E-11 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 702 793 1.3E-11 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 Pfam PF07730 Histidine kinase 596 662 5.6E-14 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SUPERFAMILY SSF55785 433 566 5.39E-21 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 443 1.0E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 474 575 1.4E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 791 3.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 3.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 750 3.3E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS11625 ea757d1f52093757abdc0ebc1974a64d 797 SUPERFAMILY SSF53850 37 262 2.26E-36 T 29-03-2018 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 Gene3D G3DSA:3.90.1150.10 210 381 8.5E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 358 487 2.1E-33 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 SUPERFAMILY SSF53383 235 350 1.09E-12 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 256 330 1.1E-15 T 29-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 Gene3D G3DSA:3.90.100.10 385 501 2.3E-21 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 SUPERFAMILY SSF55904 353 496 1.31E-23 T 29-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 AM474_RS25805 7a4670719bdea1932ccf06e93e43101a 515 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 25 136 1.4E-8 T 29-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 AM474_RS20690 397139c9c6896c1fdd309041d3330141 149 Gene3D G3DSA:2.40.33.20 1 147 1.1E-17 T 29-03-2018 AM474_RS20690 397139c9c6896c1fdd309041d3330141 149 SUPERFAMILY SSF50800 4 143 3.19E-34 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS20690 397139c9c6896c1fdd309041d3330141 149 Pfam PF03473 MOSC domain 39 140 4.3E-6 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM474_RS00260 b8c9398d1dd921434df70a6c0de955ae 304 SUPERFAMILY SSF103481 40 144 1.31E-14 T 29-03-2018 AM474_RS00260 b8c9398d1dd921434df70a6c0de955ae 304 SUPERFAMILY SSF103481 191 287 3.79E-13 T 29-03-2018 AM474_RS00260 b8c9398d1dd921434df70a6c0de955ae 304 Pfam PF00892 EamA-like transporter family 155 286 4.9E-19 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS00260 b8c9398d1dd921434df70a6c0de955ae 304 Pfam PF00892 EamA-like transporter family 8 140 6.0E-23 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS29120 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 199 30.989 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM474_RS29120 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Pfam PF02525 Flavodoxin-like fold 1 196 4.9E-47 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS29120 e2dce0f43b47d7b8aa5fcf1055496cc1 202 Gene3D G3DSA:3.40.50.360 1 202 3.0E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS29120 e2dce0f43b47d7b8aa5fcf1055496cc1 202 SUPERFAMILY SSF52218 1 199 5.53E-54 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS10505 1b3c4d9eaeed71ec6efce6ce4568a226 267 SUPERFAMILY SSF56529 3 267 6.28E-78 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10505 1b3c4d9eaeed71ec6efce6ce4568a226 267 Gene3D G3DSA:3.90.850.10 1 267 1.2E-47 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10505 1b3c4d9eaeed71ec6efce6ce4568a226 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 3.1E-140 T 29-03-2018 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase GO:0018817|GO:0019439 AM474_RS10505 1b3c4d9eaeed71ec6efce6ce4568a226 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 265 1.9E-7 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 Gene3D G3DSA:3.40.50.300 319 569 5.9E-63 T 29-03-2018 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 SMART SM00382 354 545 8.6E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 SUPERFAMILY SSF52540 322 563 7.62E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 Pfam PF00664 ABC transporter transmembrane region 53 182 4.2E-9 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 Gene3D G3DSA:1.20.1560.10 3 318 3.5E-27 T 29-03-2018 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 Pfam PF00005 ABC transporter 345 493 5.2E-25 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 SUPERFAMILY SSF90123 5 318 2.62E-35 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS10970 720448750eb91e0e3c9947c36ed83706 570 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS12380 d16824183b3d963ca72d463d6ceacb2d 169 SUPERFAMILY SSF50630 22 163 4.12E-40 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS12380 d16824183b3d963ca72d463d6ceacb2d 169 Pfam PF05618 Putative ATP-dependant zinc protease 23 166 1.8E-54 T 29-03-2018 AM474_RS12380 d16824183b3d963ca72d463d6ceacb2d 169 Gene3D G3DSA:2.40.70.10 20 156 2.3E-41 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS21090 beaff7eaa9639a33ed04ece7c9ebd587 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 186 2.2E-52 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM474_RS21090 beaff7eaa9639a33ed04ece7c9ebd587 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 188 6.4E-52 T 29-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related AM474_RS21090 beaff7eaa9639a33ed04ece7c9ebd587 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 5 190 25.906 T 29-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 AM474_RS21090 beaff7eaa9639a33ed04ece7c9ebd587 190 Gene3D G3DSA:2.60.450.10 91 189 1.3E-4 T 29-03-2018 AM474_RS14570 71d795bef02320b54d8f0b3a2498e74f 117 PIRSF PIRSF020555 1 117 2.2E-59 T 29-03-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM474_RS14570 71d795bef02320b54d8f0b3a2498e74f 117 Pfam PF16068 Domain of unknown function (DUF4810) 26 108 2.7E-32 T 29-03-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 167 3.7E-42 T 29-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 69 91 1.3E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 98 113 1.3E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 PRINTS PR01021 OMPA domain signature 113 129 1.3E-20 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 Pfam PF00691 OmpA family 68 162 3.6E-25 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 Gene3D G3DSA:3.30.1330.60 48 167 6.1E-35 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS23600 6f5cb405bc7be79abd6ae63dedbb4567 168 SUPERFAMILY SSF103088 60 166 3.92E-35 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS16805 e2c825a2c3195e86d33ad8cdca4c907a 233 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 214 3.8E-33 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM474_RS16805 e2c825a2c3195e86d33ad8cdca4c907a 233 Pfam PF01914 MarC family integral membrane protein 6 214 1.8E-49 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 2.7E-20 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.7E-20 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 2.7E-20 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 ProSitePatterns PS00760 Signal peptidases I lysine active site. 83 95 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 Gene3D G3DSA:2.10.109.10 27 176 1.6E-49 T 29-03-2018 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 Pfam PF00717 Peptidase S24-like 35 104 1.1E-18 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 ProSitePatterns PS00761 Signal peptidases I signature 3. 135 148 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 26 169 1.6E-51 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS25580 262ee7e64310cfbcc19b0bc2940e31ba 179 SUPERFAMILY SSF51306 30 170 6.8E-55 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 Gene3D G3DSA:1.10.357.10 78 207 3.4E-17 T 29-03-2018 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 2.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 2.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 Pfam PF08359 YsiA-like protein, C-terminal region 84 175 9.2E-6 T 29-03-2018 IPR013570 Transcription regulator YsiA, C-terminal AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 76 1.2E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 Gene3D G3DSA:1.10.10.60 22 77 1.1E-13 T 29-03-2018 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 SUPERFAMILY SSF46689 28 88 9.23E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00685 b114b9a8dc77dda48e3c99c3aaaa918e 210 SUPERFAMILY SSF48498 98 182 4.14E-10 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Gene3D G3DSA:3.30.450.20 30 161 3.8E-25 T 29-03-2018 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Pfam PF00672 HAMP domain 298 349 8.6E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 SMART SM00283 367 628 2.1E-99 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Pfam PF02743 Cache domain 36 260 4.2E-32 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 SUPERFAMILY SSF103190 91 184 2.51E-14 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Gene3D G3DSA:3.30.450.20 162 277 6.9E-29 T 29-03-2018 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 2.2E-9 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 381 410 2.2E-9 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Gene3D G3DSA:1.10.287.950 401 629 5.6E-51 T 29-03-2018 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Gene3D G3DSA:1.10.287.950 304 400 1.6E-6 T 29-03-2018 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 SUPERFAMILY SSF58104 320 629 8.11E-76 T 29-03-2018 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 594 4.9E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 SMART SM00304 298 352 5.8E-15 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS21870 e41fadcaa17701c35993ad2f30061c41 629 SMART SM00304 387 447 18.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03760 bb252793483b7eb780843f1a0daa5bf2 288 SUPERFAMILY SSF56281 8 253 5.28E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS03760 bb252793483b7eb780843f1a0daa5bf2 288 SMART SM00849 15 205 3.5E-24 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS03760 bb252793483b7eb780843f1a0daa5bf2 288 Pfam PF00753 Metallo-beta-lactamase superfamily 14 205 1.8E-20 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS03760 bb252793483b7eb780843f1a0daa5bf2 288 Gene3D G3DSA:3.60.15.10 1 288 2.4E-53 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22280 2697c7e9e77a1cd65e9e6e05c875c997 300 Pfam PF00561 alpha/beta hydrolase fold 29 253 3.7E-11 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS22280 2697c7e9e77a1cd65e9e6e05c875c997 300 Gene3D G3DSA:3.40.50.1820 3 274 1.6E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS22280 2697c7e9e77a1cd65e9e6e05c875c997 300 SUPERFAMILY SSF53474 12 272 8.94E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 Gene3D G3DSA:1.10.10.60 271 354 1.9E-5 T 29-03-2018 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 Gene3D G3DSA:1.10.8.60 202 270 1.8E-24 T 29-03-2018 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 Pfam PF00158 Sigma-54 interaction domain 32 195 2.0E-69 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 115 130 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 SUPERFAMILY SSF52540 33 270 2.95E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 Gene3D G3DSA:3.40.50.300 26 200 5.1E-26 T 29-03-2018 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 242 251 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 SUPERFAMILY SSF46689 242 350 6.27E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 SMART SM00382 49 192 6.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31360 32da7536e1e946792bbc4fc65179761b 376 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 53 66 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.9E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.9E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.9E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.9E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 Gene3D G3DSA:3.40.50.720 5 248 2.7E-58 T 29-03-2018 AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 Pfam PF00106 short chain dehydrogenase 6 183 1.9E-51 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.1E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25935 6b1610aed85a9d5e37e057163dc1385e 268 SUPERFAMILY SSF51735 6 232 8.48E-61 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.8E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.8E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF46689 1 65 7.98E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 SUPERFAMILY SSF48498 83 202 7.56E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 9.1E-18 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 Gene3D G3DSA:1.10.357.10 1 211 5.0E-39 T 29-03-2018 AM474_RS07205 2a4404b3476d6b758615ab8b9c7cfbe0 212 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 198 4.1E-13 T 29-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 234 303 2.2E-16 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 Gene3D G3DSA:2.30.330.10 149 217 2.2E-7 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 SUPERFAMILY SSF101801 231 308 1.27E-18 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 40 303 7.1E-65 T 29-03-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 236 248 3.9E-8 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 280 297 3.9E-8 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 175 185 3.9E-8 T 29-03-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 AM474_RS27690 addfa5526c77447e70ced1291d4761e5 309 Gene3D G3DSA:2.30.330.10 220 309 3.4E-21 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF08402 TOBE domain 286 363 4.2E-17 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 SMART SM00382 36 219 3.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 Pfam PF00005 ABC transporter 28 169 7.4E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 361 2.9E-115 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF50331 244 363 3.63E-18 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:3.40.50.300 7 251 3.1E-74 T 29-03-2018 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 Gene3D G3DSA:2.40.50.140 289 355 9.3E-5 T 29-03-2018 AM474_RS11610 5e46a81fd242851d4484fe5d8b48d412 369 SUPERFAMILY SSF52540 10 249 2.18E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 Gene3D G3DSA:1.20.120.260 103 228 9.0E-45 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 Gene3D G3DSA:3.90.176.10 250 415 7.1E-25 T 29-03-2018 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 SUPERFAMILY SSF47233 100 231 3.01E-51 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 39 56 1.0E-27 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 23 36 1.0E-27 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 215 232 1.0E-27 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 181 199 1.0E-27 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 PRINTS PR01372 Yersinia virulence determinant YopE protein signature 132 149 1.0E-27 T 29-03-2018 IPR003537 Yersinia virulence determinant YopE GO:0005096 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 Pfam PF03496 ADP-ribosyltransferase exoenzyme 246 432 2.3E-31 T 29-03-2018 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 Pfam PF03545 Yersinia virulence determinant (YopE) 132 201 2.8E-33 T 29-03-2018 IPR014773 Virulence factor YopE uncharacterised domain AM474_RS14580 64bb1de7e92108354ccdbc77eb683ade 457 SUPERFAMILY SSF56399 230 427 2.47E-32 T 29-03-2018 AM474_RS08145 e930c2018e982e423413482d9f607846 184 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS08145 e930c2018e982e423413482d9f607846 184 Pfam PF00293 NUDIX domain 44 141 7.7E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS08145 e930c2018e982e423413482d9f607846 184 Pfam PF14803 Nudix N-terminal 2 35 3.1E-17 T 29-03-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 AM474_RS08145 e930c2018e982e423413482d9f607846 184 SUPERFAMILY SSF55811 2 165 1.14E-41 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS08145 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:3.90.79.10 36 183 1.3E-30 T 29-03-2018 AM474_RS08145 e930c2018e982e423413482d9f607846 184 Gene3D G3DSA:2.20.70.10 1 34 1.8E-16 T 29-03-2018 AM474_RS07945 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 SUPERFAMILY SSF54534 2 108 6.48E-40 T 29-03-2018 AM474_RS07945 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 17 106 3.1E-32 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS07945 24bd9f9005bb8ab50b2ebd3b9d0ae307 113 Gene3D G3DSA:3.10.50.40 1 113 2.6E-41 T 29-03-2018 AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 Gene3D G3DSA:3.90.1170.30 39 113 0.0031 T 29-03-2018 AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 267 1.6E-24 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 352 5.5E-75 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 Gene3D G3DSA:1.10.287.470 114 160 2.6E-7 T 29-03-2018 AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 Gene3D G3DSA:2.40.50.100 161 353 0.047 T 29-03-2018 AM474_RS10880 f350ee0a7e03e4b855956e373c67652e 370 SUPERFAMILY SSF111369 58 272 1.44E-36 T 29-03-2018 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 SMART SM00870 6 315 1.7E-95 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 86 96 - T 29-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 9 17 - T 29-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 Gene3D G3DSA:3.40.50.40 202 328 3.7E-30 T 29-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 Pfam PF00710 Asparaginase, N-terminal 7 182 8.1E-46 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 PRINTS PR00139 Asparaginase/glutaminase family signature 85 103 1.7E-11 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 1.7E-11 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 PRINTS PR00139 Asparaginase/glutaminase family signature 7 18 1.7E-11 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 PIRSF PIRSF500176 3 324 8.9E-95 T 29-03-2018 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 Gene3D G3DSA:3.40.50.1170 3 201 5.6E-53 T 29-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 PIRSF PIRSF001220 1 326 1.3E-83 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS30875 a5992980d9ab68ee3a379194abad8335 328 SUPERFAMILY SSF53774 3 326 2.49E-87 T 29-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AM474_RS03025 0bc756b8c02197f24b6be10db23497e0 874 Pfam PF13476 AAA domain 91 143 4.6E-9 T 29-03-2018 AM474_RS03025 0bc756b8c02197f24b6be10db23497e0 874 Gene3D G3DSA:3.40.50.300 80 707 2.2E-23 T 29-03-2018 AM474_RS03025 0bc756b8c02197f24b6be10db23497e0 874 SUPERFAMILY SSF52540 462 714 8.72E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03025 0bc756b8c02197f24b6be10db23497e0 874 SUPERFAMILY SSF52540 82 214 8.72E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31255 c577ab74849a1da94996d5bf41bd5b55 278 SUPERFAMILY SSF52540 9 238 7.14E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31255 c577ab74849a1da94996d5bf41bd5b55 278 SMART SM00382 34 217 1.2E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31255 c577ab74849a1da94996d5bf41bd5b55 278 Gene3D G3DSA:3.40.50.300 1 255 1.1E-54 T 29-03-2018 AM474_RS31255 c577ab74849a1da94996d5bf41bd5b55 278 Pfam PF00005 ABC transporter 27 167 1.3E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55785 707 843 1.82E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 978 1139 1.5E-51 T 29-03-2018 IPR000160 GGDEF domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55785 283 381 3.77E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55785 480 579 2.27E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00091 584 653 1.7E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00091 853 920 6.1E-8 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00091 717 784 0.83 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00091 292 358 0.025 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF13188 PAS domain 305 349 0.015 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00052 1153 1399 4.5E-126 T 29-03-2018 IPR001633 EAL domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.450.20 271 417 1.1E-12 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.20.20.450 1147 1410 3.9E-108 T 29-03-2018 IPR001633 EAL domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.450.20 419 568 2.5E-13 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55073 983 1144 2.43E-50 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF141868 1158 1405 5.1E-92 T 29-03-2018 IPR001633 EAL domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 975 1141 7.5E-41 T 29-03-2018 IPR000160 GGDEF domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00267 967 1143 4.5E-72 T 29-03-2018 IPR000160 GGDEF domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF08447 PAS fold 608 699 4.0E-14 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.70.270 971 1146 2.8E-62 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55785 569 703 1.1E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 713 852 3.5E-11 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 581 712 5.7E-11 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 857 973 1.5E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00086 803 845 7.4E-4 T 29-03-2018 IPR001610 PAC motif AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00086 925 967 1.2E-5 T 29-03-2018 IPR001610 PAC motif AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SMART SM00086 662 705 0.0065 T 29-03-2018 IPR001610 PAC motif AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.450.20 848 964 4.9E-24 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF00563 EAL domain 1159 1394 2.3E-76 T 29-03-2018 IPR001633 EAL domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF13426 PAS domain 865 966 8.6E-17 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Pfam PF13426 PAS domain 729 844 2.2E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.450.20 569 706 1.2E-21 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 Gene3D G3DSA:3.30.450.20 707 847 1.1E-23 T 29-03-2018 AM474_RS20330 01fd672725d1b78d7703c00df6382738 1415 SUPERFAMILY SSF55785 842 965 4.89E-22 T 29-03-2018 IPR000014 PAS domain AM474_RS13170 e7a88f75fd8c8034c438049de01d602b 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 119 7.5E-31 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS13170 e7a88f75fd8c8034c438049de01d602b 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 1.9E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13170 e7a88f75fd8c8034c438049de01d602b 230 SUPERFAMILY SSF161098 22 213 3.27E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13170 e7a88f75fd8c8034c438049de01d602b 230 Gene3D G3DSA:1.10.3720.10 3 227 5.2E-39 T 29-03-2018 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:1.10.10.10 1 88 5.8E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.0E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:3.40.190.10 93 174 3.5E-14 T 29-03-2018 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 SUPERFAMILY SSF53850 95 285 1.99E-30 T 29-03-2018 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.7E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 Gene3D G3DSA:3.40.190.10 175 253 1.3E-12 T 29-03-2018 AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 SUPERFAMILY SSF46785 6 114 2.23E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25100 6ab003239a40cad3ef9181e58226225f 295 Pfam PF03466 LysR substrate binding domain 95 282 1.1E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS26080 1eafc100115ba9ac02c2bf3142fc56e3 530 Gene3D G3DSA:3.40.50.300 344 525 5.1E-15 T 29-03-2018 AM474_RS26080 1eafc100115ba9ac02c2bf3142fc56e3 530 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 329 1.7E-24 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM474_RS26080 1eafc100115ba9ac02c2bf3142fc56e3 530 Gene3D G3DSA:3.40.50.300 2 335 7.1E-36 T 29-03-2018 AM474_RS26080 1eafc100115ba9ac02c2bf3142fc56e3 530 SUPERFAMILY SSF52540 6 132 5.07E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26080 1eafc100115ba9ac02c2bf3142fc56e3 530 SUPERFAMILY SSF52540 216 513 5.07E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25435 c7348badadf8b1699e39627fbcd57d0e 218 Pfam PF00881 Nitroreductase family 20 183 5.6E-26 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS25435 c7348badadf8b1699e39627fbcd57d0e 218 Gene3D G3DSA:3.40.109.10 1 210 2.6E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS25435 c7348badadf8b1699e39627fbcd57d0e 218 SUPERFAMILY SSF55469 8 216 5.63E-47 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS25435 c7348badadf8b1699e39627fbcd57d0e 218 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 8 209 6.1E-73 T 29-03-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 SUPERFAMILY SSF51735 4 233 2.41E-58 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 Pfam PF00106 short chain dehydrogenase 5 187 5.0E-45 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.5E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.5E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.5E-25 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 Gene3D G3DSA:3.40.50.720 1 275 4.3E-55 T 29-03-2018 AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS09130 f11f27c5242c5236d974f1c22504cb93 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.2E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:1.10.10.60 366 445 2.6E-17 T 29-03-2018 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 SMART SM00382 155 298 8.5E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:3.40.50.2300 1 142 2.7E-35 T 29-03-2018 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:3.40.50.300 143 307 1.1E-25 T 29-03-2018 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF52172 1 178 3.7E-44 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF00072 Response regulator receiver domain 7 115 2.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF52540 135 377 1.4E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 SMART SM00448 4 115 7.0E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Gene3D G3DSA:1.10.8.60 308 365 1.2E-24 T 29-03-2018 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF02954 Bacterial regulatory protein, Fis family 402 442 2.3E-16 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 SUPERFAMILY SSF46689 349 445 3.99E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 Pfam PF00158 Sigma-54 interaction domain 135 301 5.2E-67 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 1.5E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 1.5E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS20610 b60de5fa185ff86afb5eb36f8089bd0e 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 Gene3D G3DSA:2.40.170.20 246 851 2.3E-62 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF07660 Secretin and TonB N terminus short domain 55 104 8.4E-8 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 127 848 1.1E-107 T 29-03-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 Gene3D G3DSA:2.170.130.10 126 245 1.4E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF00593 TonB dependent receptor 339 848 1.9E-42 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 130 849 5.6E-129 T 29-03-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 235 1.2E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 SMART SM00965 55 105 1.0E-11 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS25575 16c3d9f4d760516d64b1eee6609ed25b 851 SUPERFAMILY SSF56935 109 849 3.66E-90 T 29-03-2018 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 28 102 3.1E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 SUPERFAMILY SSF46626 125 210 8.08E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 Pfam PF00034 Cytochrome c 141 210 9.8E-6 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 Gene3D G3DSA:1.10.760.10 114 210 5.6E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 Gene3D G3DSA:1.10.760.10 6 108 9.1E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 SUPERFAMILY SSF46626 21 103 2.22E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32060 c2ceea5606ea41ff1494b6f40297f2ab 217 PIRSF PIRSF000005 1 212 2.0E-65 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 2 188 8.5E-87 T 29-03-2018 IPR009715 Regulator of RNA terminal phosphate cyclase AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 SUPERFAMILY SSF52540 190 440 3.66E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 SMART SM00382 210 356 3.0E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 Gene3D G3DSA:3.40.50.300 182 364 7.9E-25 T 29-03-2018 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 Gene3D G3DSA:3.40.50.10770 22 160 4.0E-7 T 29-03-2018 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 PIRSF PIRSF037354 1 531 7.8E-299 T 29-03-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 Gene3D G3DSA:1.10.8.60 365 448 7.6E-14 T 29-03-2018 AM474_RS20440 8cd77a6597f8e1015c899b426fddb63c 531 Pfam PF00158 Sigma-54 interaction domain 190 358 1.1E-49 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 Pfam PF05175 Methyltransferase small domain 201 371 3.2E-51 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 PIRSF PIRSF037565 1 374 4.3E-143 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 Gene3D G3DSA:3.40.50.150 191 374 4.8E-26 T 29-03-2018 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 SUPERFAMILY SSF53335 199 356 1.47E-24 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 Gene3D G3DSA:3.40.50.150 13 190 0.013 T 29-03-2018 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 45.751 T 29-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS20245 da95ccbba9ca187d442096be0e7dedff 374 SUPERFAMILY SSF53335 43 161 4.35E-5 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 Gene3D G3DSA:1.10.1740.10 9 102 1.6E-4 T 29-03-2018 AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 178 4.9E-16 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 SUPERFAMILY SSF88659 104 178 1.05E-11 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 Pfam PF08281 Sigma-70, region 4 126 178 6.4E-13 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 SUPERFAMILY SSF88946 13 100 9.02E-5 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS02710 8b750a2916d250a9303af3835c2c1064 197 Gene3D G3DSA:1.10.10.10 107 183 4.5E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.40.605.10 556 829 4.4E-74 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 74 187 2.2E-45 T 29-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 533 1037 5.5E-212 T 29-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF00171 Aldehyde dehydrogenase family 583 1037 2.2E-115 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF81935 19 189 1.83E-62 T 29-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.20.20.220 114 533 2.1E-106 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.20.20.220 17 113 6.0E-11 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF51730 190 540 4.32E-114 T 29-03-2018 IPR029041 FAD-linked oxidoreductase-like AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Pfam PF01619 Proline dehydrogenase 197 496 5.8E-95 T 29-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 841 852 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 PIRSF PIRSF000197 4 1057 0.0 T 29-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 SUPERFAMILY SSF53720 553 1042 1.2E-127 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS22555 768bc4cd4e37a92cb4961ca1604a9e55 1060 Gene3D G3DSA:3.40.309.10 830 1019 8.8E-48 T 29-03-2018 AM474_RS06015 410948b77b2345fbbe73dc64b9ca60c2 388 Gene3D G3DSA:1.20.1250.20 3 192 8.6E-21 T 29-03-2018 AM474_RS06015 410948b77b2345fbbe73dc64b9ca60c2 388 Pfam PF07690 Major Facilitator Superfamily 10 310 1.1E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS06015 410948b77b2345fbbe73dc64b9ca60c2 388 SUPERFAMILY SSF103473 3 373 1.14E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS06015 410948b77b2345fbbe73dc64b9ca60c2 388 Gene3D G3DSA:1.20.1250.20 193 376 3.3E-16 T 29-03-2018 AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 SMART SM00490 461 547 2.3E-21 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.2E-17 T 29-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 SMART SM00487 10 427 9.1E-28 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 Gene3D G3DSA:3.40.50.300 12 413 4.9E-31 T 29-03-2018 AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 Gene3D G3DSA:3.40.50.300 416 590 1.0E-33 T 29-03-2018 AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 SUPERFAMILY SSF52540 460 573 9.03E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 SUPERFAMILY SSF52540 40 83 9.03E-35 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 613 5.5E-273 T 29-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 Pfam PF04851 Type III restriction enzyme, res subunit 17 100 1.0E-11 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 SUPERFAMILY SSF52540 6 416 1.93E-117 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03210 196252e2d84ceee9866dc1e7365d1bd2 658 Pfam PF00271 Helicase conserved C-terminal domain 435 546 7.3E-19 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 19 76 1.9E-6 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 SUPERFAMILY SSF52833 4 77 7.78E-12 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 Gene3D G3DSA:1.20.1050.10 84 210 1.3E-19 T 29-03-2018 AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 SUPERFAMILY SSF47616 85 202 3.9E-20 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 193 7.8E-13 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS26450 573630fbc0b13b0c333c6dbc5de4d673 228 Gene3D G3DSA:3.40.30.10 1 78 7.1E-11 T 29-03-2018 AM474_RS17595 96df22e9c333fa08211c677c7c995bd2 559 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 559 0.0 T 29-03-2018 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 AM474_RS17595 96df22e9c333fa08211c677c7c995bd2 559 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.2E-65 T 29-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AM474_RS17595 96df22e9c333fa08211c677c7c995bd2 559 SUPERFAMILY SSF53474 198 489 4.16E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17595 96df22e9c333fa08211c677c7c995bd2 559 Gene3D G3DSA:3.40.50.1820 166 503 5.6E-16 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 SUPERFAMILY SSF52172 2 170 2.85E-30 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 Gene3D G3DSA:3.40.50.2300 1 124 1.4E-27 T 29-03-2018 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 SMART SM00448 2 114 4.0E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 4.4E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 Gene3D G3DSA:1.10.10.10 125 207 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 SMART SM00421 144 201 1.3E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 Pfam PF00072 Response regulator receiver domain 4 115 4.9E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 4.9E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 4.9E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04445 a22b6fe9a13172875db428cd5748501a 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 4.9E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF47323 639 898 1.23E-70 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 930 0.0 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Gene3D G3DSA:1.10.730.10 628 815 3.5E-56 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF46589 883 947 9.94E-18 T 29-03-2018 IPR010978 tRNA-binding arm GO:0000166 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Pfam PF08264 Anticodon-binding domain of tRNA 671 823 1.3E-43 T 29-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 947 1.6E-19 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF50677 188 362 2.35E-59 T 29-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Gene3D G3DSA:1.10.287.380 876 946 2.2E-26 T 29-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 1.1E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 1.1E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 1.1E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 1.1E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.1E-35 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 3.0E-219 T 29-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Gene3D G3DSA:3.40.50.620 2 627 2.4E-138 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 948 16.154 T 29-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF52374 606 638 3.96E-137 T 29-03-2018 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF52374 1 189 3.96E-137 T 29-03-2018 AM474_RS08875 3e3f9039faa194f2fa2bfc92d188bade 950 SUPERFAMILY SSF52374 361 568 3.96E-137 T 29-03-2018 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 SMART SM00155 83 110 0.39 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 SMART SM00155 265 291 1.4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 Gene3D G3DSA:3.30.870.10 180 333 2.1E-27 T 29-03-2018 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 Gene3D G3DSA:3.30.870.10 1 179 7.1E-26 T 29-03-2018 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 SUPERFAMILY SSF56024 181 338 3.14E-38 T 29-03-2018 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 SUPERFAMILY SSF56024 2 152 1.23E-34 T 29-03-2018 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 Pfam PF13091 PLD-like domain 191 313 1.6E-25 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS21710 adbde0b21a71b4b7dcfa1d63c431bf69 359 Pfam PF13091 PLD-like domain 4 143 3.0E-11 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS07975 3ca15b8214f46fe443b4a94da8eb2a39 368 SUPERFAMILY SSF51395 1 356 7.33E-119 T 29-03-2018 AM474_RS07975 3ca15b8214f46fe443b4a94da8eb2a39 368 Gene3D G3DSA:3.20.20.70 1 358 9.7E-123 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS07975 3ca15b8214f46fe443b4a94da8eb2a39 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 340 4.5E-71 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 Gene3D G3DSA:3.40.50.300 1 235 5.0E-59 T 29-03-2018 AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF00005 ABC transporter 20 166 3.6E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 SUPERFAMILY SSF52540 4 235 1.93E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 3.5E-122 T 29-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 6.3E-5 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 SMART SM00382 28 213 6.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS21080 29be98c92fe47efa1a9a02e79eb01bb8 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS14300 ea2579e5e0b3df6225aad655a87fb9b2 345 SUPERFAMILY SSF53901 7 197 4.9E-9 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS14300 ea2579e5e0b3df6225aad655a87fb9b2 345 Gene3D G3DSA:3.40.47.10 33 193 2.3E-9 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS14300 ea2579e5e0b3df6225aad655a87fb9b2 345 Gene3D G3DSA:3.40.47.10 194 341 9.4E-5 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS14300 ea2579e5e0b3df6225aad655a87fb9b2 345 SUPERFAMILY SSF53901 182 317 6.38E-10 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88659 123 187 7.85E-18 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 190 6.9E-99 T 29-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF08281 Sigma-70, region 4 132 181 2.9E-18 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 Pfam PF04542 Sigma-70 region 2 25 92 1.1E-17 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 29-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 5.7E-31 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.1740.10 1 115 4.0E-31 T 29-03-2018 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 SUPERFAMILY SSF88946 1 108 1.38E-32 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS22455 86dda65e985ac48ceba67694921bb7c1 193 Gene3D G3DSA:1.10.10.10 116 189 3.0E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21225 52e8b4b61635dfaa9791524f7549dd69 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.1E-46 T 29-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM474_RS21225 52e8b4b61635dfaa9791524f7549dd69 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 29-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM474_RS21225 52e8b4b61635dfaa9791524f7549dd69 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.217 T 29-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AM474_RS21225 52e8b4b61635dfaa9791524f7549dd69 130 Gene3D G3DSA:3.30.230.10 3 130 3.0E-52 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS21225 52e8b4b61635dfaa9791524f7549dd69 130 SUPERFAMILY SSF54211 6 130 1.93E-48 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS16375 4866becbc33a9acb30b96cbee01fd8ef 442 ProSitePatterns PS01219 Ammonium transporters signature. 198 223 - T 29-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AM474_RS16375 4866becbc33a9acb30b96cbee01fd8ef 442 Pfam PF00909 Ammonium Transporter Family 35 440 1.3E-117 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM474_RS16375 4866becbc33a9acb30b96cbee01fd8ef 442 Gene3D G3DSA:1.10.3430.10 25 421 4.4E-131 T 29-03-2018 AM474_RS16375 4866becbc33a9acb30b96cbee01fd8ef 442 TIGRFAM TIGR00836 amt: ammonium transporter 33 440 1.2E-143 T 29-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AM474_RS16375 4866becbc33a9acb30b96cbee01fd8ef 442 SUPERFAMILY SSF111352 29 421 1.96E-128 T 29-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 SUPERFAMILY SSF46894 157 217 2.86E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 Gene3D G3DSA:1.10.10.10 103 219 2.6E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 213 2.2E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 SMART SM00421 158 215 1.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 3.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 3.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS19195 c21b6742da4503b2aa2eab9226e42446 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 3.2E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS24885 7c1c8632b256b0132a31bd1d13fdf01a 393 Gene3D G3DSA:3.40.50.10540 1 393 3.3E-130 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS24885 7c1c8632b256b0132a31bd1d13fdf01a 393 SUPERFAMILY SSF89796 3 392 4.45E-124 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS24885 7c1c8632b256b0132a31bd1d13fdf01a 393 Pfam PF02515 CoA-transferase family III 5 360 1.1E-100 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM474_RS06205 bd766f8521f9da7f43c87c8f658f263d 155 Gene3D G3DSA:3.40.630.30 1 88 2.7E-13 T 29-03-2018 AM474_RS06205 bd766f8521f9da7f43c87c8f658f263d 155 Gene3D G3DSA:3.40.630.30 89 145 6.7E-11 T 29-03-2018 AM474_RS06205 bd766f8521f9da7f43c87c8f658f263d 155 Pfam PF13673 Acetyltransferase (GNAT) domain 33 153 8.1E-27 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS06205 bd766f8521f9da7f43c87c8f658f263d 155 SUPERFAMILY SSF55729 6 145 3.43E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS25330 6745e26dd5fabe435082ae0703d89455 344 Gene3D G3DSA:3.10.310.10 1 151 1.2E-25 T 29-03-2018 AM474_RS25330 6745e26dd5fabe435082ae0703d89455 344 PIRSF PIRSF029792 1 336 5.6E-117 T 29-03-2018 IPR008794 Proline racemase family AM474_RS25330 6745e26dd5fabe435082ae0703d89455 344 Gene3D G3DSA:3.10.310.10 152 311 8.7E-52 T 29-03-2018 AM474_RS25330 6745e26dd5fabe435082ae0703d89455 344 SUPERFAMILY SSF54506 1 333 2.69E-109 T 29-03-2018 AM474_RS25330 6745e26dd5fabe435082ae0703d89455 344 Pfam PF05544 Proline racemase 9 334 9.8E-140 T 29-03-2018 IPR008794 Proline racemase family AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 Gene3D G3DSA:3.40.309.10 281 477 5.0E-72 T 29-03-2018 AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 Pfam PF00171 Aldehyde dehydrogenase family 32 490 6.5E-168 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 Gene3D G3DSA:3.40.605.10 5 280 6.4E-96 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS13690 47a9c5da7859f8d3d29c8bdbcdff8da8 496 SUPERFAMILY SSF53720 15 494 5.11E-168 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 Gene3D G3DSA:3.40.50.170 5 202 2.0E-72 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 191 32.676 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 SUPERFAMILY SSF53328 6 204 7.59E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 137 160 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 3.1E-78 T 29-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM474_RS23435 bb016ad07c1622bac86ad2727f267994 222 Pfam PF00551 Formyl transferase 6 184 1.7E-66 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 Gene3D G3DSA:3.30.1330.60 92 267 4.1E-43 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 241 261 1.1E-5 T 29-03-2018 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 221 240 1.1E-5 T 29-03-2018 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 203 220 1.1E-5 T 29-03-2018 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF14346 Domain of unknown function (DUF4398) 15 115 2.2E-20 T 29-03-2018 IPR025511 Domain of unknown function DUF4398 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 203 219 6.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 158 180 6.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 PRINTS PR01021 OMPA domain signature 188 203 6.3E-12 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 Pfam PF00691 OmpA family 157 252 5.3E-23 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS03685 93db9fa1107f5fa95e0eaa84281386dc 269 SUPERFAMILY SSF103088 149 258 4.32E-36 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS14130 52686d1e87b65186fb45bbd7babd221e 95 SUPERFAMILY SSF51182 4 91 5.2E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS14130 52686d1e87b65186fb45bbd7babd221e 95 Gene3D G3DSA:2.60.120.10 3 95 6.0E-15 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS14130 52686d1e87b65186fb45bbd7babd221e 95 Pfam PF07883 Cupin domain 23 90 7.9E-8 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF55315 2 77 2.0E-18 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.085 T 29-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 4.6E-82 T 29-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.40.1280.10 82 246 2.3E-48 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF00588 SpoU rRNA Methylase family 98 238 3.3E-40 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 SMART SM00967 6 81 6.3E-20 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 Gene3D G3DSA:3.30.1330.30 2 77 1.1E-18 T 29-03-2018 IPR029064 50S ribosomal protein L30e-like AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 5.8E-19 T 29-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM474_RS18510 32f0d17dda4859c69ae6254654c6abab 248 SUPERFAMILY SSF75217 70 245 5.3E-49 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS01480 8bc7cc5c3df11878131fdd95af7124b7 130 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 1.6E-17 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM474_RS01480 8bc7cc5c3df11878131fdd95af7124b7 130 SUPERFAMILY SSF51316 3 123 1.78E-36 T 29-03-2018 IPR011057 Mss4-like AM474_RS01480 8bc7cc5c3df11878131fdd95af7124b7 130 Gene3D G3DSA:3.90.1590.10 1 130 2.8E-33 T 29-03-2018 AM474_RS25715 2307527189e1e3c52c2715dec1f346e6 138 SUPERFAMILY SSF143744 3 134 1.06E-34 T 29-03-2018 AM474_RS25715 2307527189e1e3c52c2715dec1f346e6 138 Pfam PF03928 Haem-degrading 5 131 2.4E-30 T 29-03-2018 IPR005624 Haem-degrading AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF13332 Haemagluttinin repeat 2697 2764 1.6E-5 T 29-03-2018 IPR025157 Hemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF13332 Haemagluttinin repeat 2630 2693 3.0E-5 T 29-03-2018 IPR025157 Hemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF13332 Haemagluttinin repeat 2850 3005 5.0E-8 T 29-03-2018 IPR025157 Hemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF13332 Haemagluttinin repeat 3083 3258 5.4E-44 T 29-03-2018 IPR025157 Hemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF04829 Pre-toxin domain with VENN motif 3604 3652 6.4E-13 T 29-03-2018 IPR006914 VENN motif-containing domain AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1623 1682 4.8 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1162 1235 3.4E-4 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1347 1436 1.9E-6 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1832 1907 84.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 220 296 8.0E-8 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 978 1067 0.0035 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 411 464 1.7E-6 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1561 1622 53.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 475 544 0.0052 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 639 701 0.0054 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 2489 2535 26.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1282 1342 3.6E-4 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 827 877 4.2E-7 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 2162 2189 12.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 2045 2099 100.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1444 1477 0.62 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 719 773 0.0027 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 2579 2618 40.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1479 1554 0.99 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05594 Haemagluttinin repeat 1974 2004 110.0 T 29-03-2018 IPR008619 Filamentous haemagglutinin repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 SUPERFAMILY SSF51126 45 298 1.32E-61 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 SMART SM00912 47 168 4.7E-46 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF05860 haemagglutination activity domain 33 166 1.5E-33 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Pfam PF14437 MafB19-like deaminase 3778 3851 4.5E-9 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 2624 2759 0.091 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 1378 1484 3.7E-5 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 1070 1189 4.7E-6 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 498 581 0.0043 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 1207 1377 1.3E-7 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 1723 1945 4.3E-9 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 2244 2528 3.8E-10 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 871 934 0.21 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 729 870 1.8E-7 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 319 362 0.027 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 1485 1668 2.5E-7 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 34 318 1.0E-57 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 367 497 1.5E-6 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 Gene3D G3DSA:2.160.20.10 2529 2618 0.0032 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1451 1488 2.6E-7 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1258 1298 0.0017 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 589 629 1.2E-7 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1112 1152 0.0039 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1007 1046 1.4E-9 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 509 544 2.6E-6 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1469 1509 0.0021 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1194 1224 0.0016 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2584 2615 0.61 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 857 896 1.6E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 733 773 8.8E-8 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1666 1704 5.3E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1871 1907 7.4E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 774 813 5.2E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1386 1425 2.7E-7 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 899 939 6.2E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1092 1130 0.0027 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1417 1447 0.092 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1427 1468 0.14 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 383 422 7.4E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1300 1341 0.025 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 610 648 3.5E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 816 856 1.6E-6 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1490 1533 0.1 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 546 586 2.5E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1909 1946 6.0E-6 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2496 2535 7.3E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 315 354 0.43 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1153 1189 2.7E-7 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2515 2551 0.047 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1520 1554 1.9E-6 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 941 973 1.2 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 692 731 3.7E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1223 1256 3.9E-5 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1344 1384 4.0E-9 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1534 1575 9.1E-4 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 466 505 0.0068 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 2048 2087 0.0077 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 962 1005 0.028 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1049 1088 0.0023 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 423 464 5.5E-7 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1585 1617 0.79 T 29-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AM474_RS14650 0ec886d83ff89b3740c564b4cc340b4e 3875 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 66 163 1.3E-17 T 29-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal AM474_RS30245 5de8a54095092ece44a8a73bb94b8476 316 SUPERFAMILY SSF53335 82 274 2.99E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS30245 5de8a54095092ece44a8a73bb94b8476 316 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS30245 5de8a54095092ece44a8a73bb94b8476 316 Gene3D G3DSA:3.40.50.150 101 293 1.4E-24 T 29-03-2018 AM474_RS30245 5de8a54095092ece44a8a73bb94b8476 316 Pfam PF05175 Methyltransferase small domain 131 252 7.7E-16 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM474_RS28885 394ee99a3208070c584c0821a3b33ca1 515 Gene3D G3DSA:3.20.20.150 59 411 5.2E-4 T 29-03-2018 AM474_RS28885 394ee99a3208070c584c0821a3b33ca1 515 Pfam PF07905 Purine catabolism regulatory protein-like family 8 123 3.8E-31 T 29-03-2018 IPR012914 Purine catabolism PurC-like domain AM474_RS28885 394ee99a3208070c584c0821a3b33ca1 515 Gene3D G3DSA:1.10.10.60 412 465 5.0E-6 T 29-03-2018 AM474_RS28885 394ee99a3208070c584c0821a3b33ca1 515 Pfam PF13556 PucR C-terminal helix-turn-helix domain 429 487 7.2E-19 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 Gene3D G3DSA:1.20.1110.10 40 352 5.9E-28 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 SUPERFAMILY SSF81653 155 248 6.54E-23 T 29-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 122 612 6.8E-60 T 29-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 SUPERFAMILY SSF56784 395 634 4.31E-40 T 29-03-2018 IPR023214 HAD-like domain AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 SUPERFAMILY SSF56784 339 358 4.31E-40 T 29-03-2018 IPR023214 HAD-like domain AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 543 1.7E-27 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 Gene3D G3DSA:3.40.1110.10 353 489 5.7E-22 T 29-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 342 348 - T 29-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 98 637 2.1E-161 T 29-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 Gene3D G3DSA:3.40.50.1000 490 583 1.0E-9 T 29-03-2018 IPR023214 HAD-like domain AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 Pfam PF00122 E1-E2 ATPase 148 320 6.9E-49 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 98 639 3.1E-151 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 SUPERFAMILY SSF81665 249 334 7.06E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 SUPERFAMILY SSF81665 100 151 7.06E-12 T 29-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 466 8.2E-17 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 340 354 8.2E-17 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 212 8.2E-17 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 8.2E-17 T 29-03-2018 AM474_RS31775 f8eee9949904b4694a646f8fdcdae1ad 660 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 8.2E-17 T 29-03-2018 AM474_RS16340 756b831b4d76e52d510468766e23336e 488 Pfam PF01554 MatE 244 409 2.8E-30 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS16340 756b831b4d76e52d510468766e23336e 488 Pfam PF01554 MatE 18 176 2.3E-22 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS16340 756b831b4d76e52d510468766e23336e 488 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 423 6.3E-67 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS16340 756b831b4d76e52d510468766e23336e 488 PIRSF PIRSF006603 5 455 7.0E-52 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS05750 349ca32cf8b88bc14f7fcffc9918aede 156 SUPERFAMILY SSF52499 1 154 3.92E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS05750 349ca32cf8b88bc14f7fcffc9918aede 156 Gene3D G3DSA:3.40.50.850 1 156 1.9E-18 T 29-03-2018 AM474_RS05750 349ca32cf8b88bc14f7fcffc9918aede 156 Pfam PF00857 Isochorismatase family 62 151 5.5E-10 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS05830 bb522891c55816db9df78a419f156e84 156 Gene3D G3DSA:3.10.129.10 7 139 5.4E-35 T 29-03-2018 AM474_RS05830 bb522891c55816db9df78a419f156e84 156 Pfam PF01575 MaoC like domain 16 116 2.4E-25 T 29-03-2018 IPR002539 MaoC-like domain AM474_RS05830 bb522891c55816db9df78a419f156e84 156 SUPERFAMILY SSF54637 5 141 2.04E-38 T 29-03-2018 IPR029069 HotDog domain AM474_RS05830 bb522891c55816db9df78a419f156e84 156 PRINTS PR01483 Fatty acid synthase signature 26 48 3.0E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AM474_RS05830 bb522891c55816db9df78a419f156e84 156 PRINTS PR01483 Fatty acid synthase signature 48 69 3.0E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 SUPERFAMILY SSF52540 4 241 4.37E-87 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 Gene3D G3DSA:3.40.50.300 1 256 2.5E-77 T 29-03-2018 AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 SMART SM00382 28 211 1.7E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 SUPERFAMILY SSF50331 252 327 3.91E-8 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 Pfam PF08402 TOBE domain 257 327 9.1E-8 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS05550 65673dbab091085c77e0f7fbbe212122 331 Pfam PF00005 ABC transporter 20 161 1.2E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS24970 f69e6a5bd013f70d4190fd72f77ab2f5 205 Gene3D G3DSA:3.90.1720.10 60 204 3.0E-38 T 29-03-2018 AM474_RS24970 f69e6a5bd013f70d4190fd72f77ab2f5 205 Pfam PF00877 NlpC/P60 family 82 190 9.4E-30 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM474_RS24970 f69e6a5bd013f70d4190fd72f77ab2f5 205 SUPERFAMILY SSF54001 66 193 2.13E-39 T 29-03-2018 AM474_RS32165 07262778d39c56d593b17d2229859a53 417 Gene3D G3DSA:3.40.1580.10 14 186 1.1E-6 T 29-03-2018 AM474_RS32165 07262778d39c56d593b17d2229859a53 417 SUPERFAMILY SSF140860 248 313 2.35E-6 T 29-03-2018 AM474_RS32165 07262778d39c56d593b17d2229859a53 417 Gene3D G3DSA:1.25.40.20 246 379 1.2E-6 T 29-03-2018 IPR020683 Ankyrin repeat-containing domain AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 615 759 5.2E-49 T 29-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 SUPERFAMILY SSF69349 442 493 1.41E-9 T 29-03-2018 AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 SUPERFAMILY SSF69279 9 182 1.19E-46 T 29-03-2018 AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 9 493 1.6E-159 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 SUPERFAMILY SSF69279 197 365 8.33E-32 T 29-03-2018 AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 Gene3D G3DSA:2.40.50.230 370 452 1.3E-35 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 Pfam PF05954 Phage late control gene D protein (GPD) 27 327 7.1E-74 T 29-03-2018 AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 Gene3D G3DSA:3.55.50.10 96 185 5.7E-20 T 29-03-2018 AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 19 502 1.3E-119 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 475 581 4.3E-34 T 29-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain AM474_RS26675 a990931ecc420ed6fc15cf10ec2e3684 842 SUPERFAMILY SSF69255 364 451 1.02E-33 T 29-03-2018 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 6.7E-76 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:1.10.287.470 115 158 5.5E-11 T 29-03-2018 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:2.40.50.100 57 114 2.4E-18 T 29-03-2018 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 Gene3D G3DSA:2.40.50.100 160 353 5.2E-9 T 29-03-2018 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 SUPERFAMILY SSF111369 47 276 3.53E-24 T 29-03-2018 AM474_RS07745 76ee84500a3d07339ff0c3bb8821f5c8 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 262 2.5E-20 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Hamap MF_00303 Trigger factor [tig]. 1 417 21.499 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 PIRSF PIRSF003095 1 432 2.4E-123 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 2.2E-12 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:1.10.3120.10 227 388 3.7E-44 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF109998 248 428 8.63E-47 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 TIGRFAM TIGR00115 tig: trigger factor 11 410 1.0E-138 T 29-03-2018 IPR005215 Trigger factor GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.2E-42 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF54534 90 241 1.39E-34 T 29-03-2018 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 411 3.1E-36 T 29-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 SUPERFAMILY SSF102735 1 130 8.5E-41 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:3.30.70.1050 1 118 1.1E-37 T 29-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM474_RS28275 3bcc344d2c3c7fb963147a52a27a7ba6 436 Gene3D G3DSA:3.10.50.40 157 226 4.3E-12 T 29-03-2018 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 SUPERFAMILY SSF53850 85 275 7.71E-34 T 29-03-2018 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:1.10.10.10 1 83 6.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:3.40.190.10 84 181 4.7E-18 T 29-03-2018 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 Pfam PF03466 LysR substrate binding domain 87 288 1.0E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 Gene3D G3DSA:3.40.190.10 182 265 1.3E-10 T 29-03-2018 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.5E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29875 6afc1ca582b7255f154d7ada77f8c85d 317 SUPERFAMILY SSF46785 1 110 7.26E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:3.40.50.720 235 453 1.9E-69 T 29-03-2018 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 SMART SM00984 320 427 3.6E-46 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 426 5.9E-29 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 4.6E-61 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF52413 312 437 2.62E-36 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 PIRSF PIRSF000124 1 442 3.4E-143 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 423 1.4E-132 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF51735 1 195 8.55E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 6.3E-37 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 SUPERFAMILY SSF48179 204 301 1.05E-31 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:3.40.50.720 1 202 7.6E-63 T 29-03-2018 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 Gene3D G3DSA:1.20.5.170 204 232 5.8E-14 T 29-03-2018 AM474_RS29430 38c246108ea42c6dd38228e53d6b8570 453 PIRSF PIRSF500134 1 445 6.4E-178 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 Pfam PF00437 Type II/IV secretion system protein 11 269 1.7E-45 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.30.450.90 1 100 5.3E-26 T 29-03-2018 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 SMART SM00382 122 256 0.0063 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 6.8E-153 T 29-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.40.50.300 116 271 2.1E-26 T 29-03-2018 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 Gene3D G3DSA:3.40.50.300 272 344 4.7E-13 T 29-03-2018 AM474_RS12730 a93945545a393f8ff423720c7e3c3baf 344 SUPERFAMILY SSF52540 5 335 1.69E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 2.2E-22 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 68 87 2.2E-22 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 370 384 2.2E-22 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 432 445 2.2E-22 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 295 317 2.2E-22 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 SUPERFAMILY SSF56601 27 469 9.4E-92 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Gene3D G3DSA:3.40.710.10 24 475 2.8E-40 T 29-03-2018 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 454 1.5E-65 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS04455 c76c8c7bcd4fb2fee7af7f610b92ea47 476 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 454 1.4E-86 T 29-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM474_RS21415 0073a046f4d53029418143c562935a39 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 327 6.3E-12 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21415 0073a046f4d53029418143c562935a39 366 SMART SM00267 187 355 2.3E-5 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21415 0073a046f4d53029418143c562935a39 366 Gene3D G3DSA:3.30.70.270 195 361 7.9E-18 T 29-03-2018 AM474_RS21415 0073a046f4d53029418143c562935a39 366 SUPERFAMILY SSF52172 50 193 2.28E-28 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS21415 0073a046f4d53029418143c562935a39 366 Pfam PF00072 Response regulator receiver domain 53 167 2.1E-21 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS21415 0073a046f4d53029418143c562935a39 366 SUPERFAMILY SSF55073 203 355 7.53E-12 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS21415 0073a046f4d53029418143c562935a39 366 SMART SM00448 51 167 1.1E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS21415 0073a046f4d53029418143c562935a39 366 Gene3D G3DSA:3.40.50.2300 46 194 3.1E-26 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 Gene3D G3DSA:1.10.287.470 107 165 2.9E-12 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 SUPERFAMILY SSF111369 107 165 5.75E-6 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 SUPERFAMILY SSF111369 174 253 7.32E-10 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 Gene3D G3DSA:1.20.1600.10 170 265 6.5E-9 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 285 4.3E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 Gene3D G3DSA:2.40.50.100 38 98 3.3E-13 T 29-03-2018 AM474_RS06385 933ad257e8d9f1e4c79e883c57ac6c90 323 SUPERFAMILY SSF111369 40 94 4.05E-5 T 29-03-2018 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 656 678 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 684 707 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 PRINTS PR01183 Ribonucleotide reductase large chain signature 618 641 4.3E-48 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 6.4E-22 T 29-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 Pfam PF03477 ATP cone domain 33 128 2.6E-18 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 Pfam PF03477 ATP cone domain 149 233 7.7E-8 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 Gene3D G3DSA:3.20.70.20 274 912 5.8E-210 T 29-03-2018 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 905 1.2E-182 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF51998 840 907 5.8E-182 T 29-03-2018 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF51998 370 809 5.8E-182 T 29-03-2018 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 SUPERFAMILY SSF48168 154 369 4.45E-64 T 29-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS24720 f918cd8bb43911338ab2aaa104636425 963 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 907 3.0E-216 T 29-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 256 1.4E-87 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 8 500 1.4E-227 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 139 151 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 8 259 2.46E-96 T 29-03-2018 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 4 252 7.8E-88 T 29-03-2018 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 PIRSF PIRSF000538 7 504 7.3E-180 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 Gene3D G3DSA:3.30.420.40 253 504 4.3E-82 T 29-03-2018 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 455 5.8E-62 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 Hamap MF_00186 Glycerol kinase [glpK]. 7 501 59.451 T 29-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AM474_RS07255 3399c410cd2e669d9f592fb75cee140a 505 SUPERFAMILY SSF53067 258 500 1.51E-85 T 29-03-2018 AM474_RS03935 a79ce6a6c4f7ac035715966586f49577 142 Pfam PF01890 Cobalamin synthesis G C-terminus 9 133 3.1E-27 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM474_RS03935 a79ce6a6c4f7ac035715966586f49577 142 SUPERFAMILY SSF159664 4 134 9.94E-36 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM474_RS03935 a79ce6a6c4f7ac035715966586f49577 142 Gene3D G3DSA:3.30.420.180 3 142 4.9E-35 T 29-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AM474_RS27335 d712c2272dc973fe4ed746fc72187f29 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 7.5E-11 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM474_RS27335 d712c2272dc973fe4ed746fc72187f29 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 28 1.5E-8 T 29-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 Pfam PF00196 Bacterial regulatory proteins, luxR family 845 895 5.3E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 844 858 4.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 874 886 4.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 858 874 4.1E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 SUPERFAMILY SSF52540 30 260 1.03E-10 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:3.40.50.300 32 306 3.7E-7 T 29-03-2018 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 SUPERFAMILY SSF46894 840 904 1.26E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 ProSitePatterns PS00622 LuxR-type HTH domain signature. 858 885 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 SMART SM00421 841 898 2.7E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:1.25.40.10 464 832 5.7E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 Pfam PF13191 AAA ATPase domain 38 169 4.1E-10 T 29-03-2018 AM474_RS28030 c71003476007ca9bb3167de227114ea4 907 Gene3D G3DSA:1.10.10.10 836 907 5.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17675 65dbd959069b7318bad177de8e5d150c 174 Pfam PF04351 Pilus assembly protein, PilP 26 170 6.5E-50 T 29-03-2018 IPR007446 Pilus assembly protein PilP AM474_RS17675 65dbd959069b7318bad177de8e5d150c 174 PIRSF PIRSF016481 1 174 1.1E-72 T 29-03-2018 IPR007446 Pilus assembly protein PilP AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 Gene3D G3DSA:3.10.20.30 3 92 6.1E-23 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 214 7.7E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 141 7.7E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00410 Phenol hydroxylase reductase family signature 288 296 7.7E-5 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 Gene3D G3DSA:3.40.50.80 183 304 8.1E-12 T 29-03-2018 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 Gene3D G3DSA:2.40.30.10 93 182 3.9E-12 T 29-03-2018 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 Pfam PF00175 Oxidoreductase NAD-binding domain 196 254 3.1E-6 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 SUPERFAMILY SSF54292 8 85 5.77E-23 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 SUPERFAMILY SSF52343 188 305 1.14E-20 T 29-03-2018 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 SUPERFAMILY SSF63380 100 180 7.53E-17 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 128 3.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 134 141 3.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 195 214 3.7E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS21750 35890569585baa5c2743a9e83ce703bf 308 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 76 1.9E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.90.180.10 2 163 4.8E-38 T 29-03-2018 AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 2.3E-138 T 29-03-2018 IPR014188 Acrylyl-CoA reductase AcuI AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 Gene3D G3DSA:3.40.50.720 164 261 3.3E-13 T 29-03-2018 AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 9.3E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 Pfam PF00107 Zinc-binding dehydrogenase 162 271 2.7E-12 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF51735 119 296 1.65E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 SUPERFAMILY SSF50129 8 147 2.59E-40 T 29-03-2018 IPR011032 GroES-like AM474_RS28445 c94b9267dc9fa948310468861dae90a5 330 SMART SM00829 15 327 1.5E-8 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS20115 70d51b58d47bcc95b17720f4e3257d25 195 Pfam PF03923 Uncharacterized lipoprotein 39 192 7.7E-12 T 29-03-2018 IPR005619 Uncharacterised protein family, YajG AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 Pfam PF00805 Pentapeptide repeats (8 copies) 92 123 4.0E-7 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 Pfam PF00805 Pentapeptide repeats (8 copies) 47 84 4.6E-6 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 Gene3D G3DSA:3.30.1120.50 57 87 7.7E-5 T 29-03-2018 AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 Gene3D G3DSA:3.30.1120.50 18 56 2.0E-7 T 29-03-2018 AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 SUPERFAMILY SSF141571 18 143 4.71E-29 T 29-03-2018 AM474_RS31910 5078b2c7de025a8f7e91844f7df4c754 159 Gene3D G3DSA:2.160.20.80 88 146 5.1E-11 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Pfam PF00501 AMP-binding enzyme 245 633 1.0E-87 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:1.10.1200.10 744 828 6.6E-11 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Pfam PF00550 Phosphopantetheine attachment site 742 804 3.3E-6 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Pfam PF00668 Condensation domain 823 1150 1.8E-34 T 29-03-2018 IPR001242 Condensation domain AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:3.40.50.980 391 542 1.2E-27 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 266 657 7.8E-119 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:3.40.50.980 236 390 5.8E-46 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:3.30.559.10 829 1017 2.0E-16 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 SUPERFAMILY SSF52777 1004 1238 4.45E-31 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:3.30.300.30 629 743 1.4E-31 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 ProSitePatterns PS00455 Putative AMP-binding domain signature. 385 396 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 SUPERFAMILY SSF56801 208 752 8.9E-142 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 ProSitePatterns PS00012 Phosphopantetheine attachment site. 763 778 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 SUPERFAMILY SSF52777 824 980 2.89E-18 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 SUPERFAMILY SSF47336 735 823 1.7E-8 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Gene3D G3DSA:2.30.38.10 546 624 9.8E-23 T 29-03-2018 AM474_RS31135 91890d06ba77323292452065bf8c6e67 1249 Pfam PF13193 AMP-binding enzyme C-terminal domain 642 715 7.4E-9 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 803 915 3.2E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Gene3D G3DSA:3.30.450.20 551 672 2.6E-21 T 29-03-2018 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SMART SM00387 802 916 8.2E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SMART SM00388 690 760 8.5E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 557 682 1.7E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SUPERFAMILY SSF47384 685 757 5.89E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SUPERFAMILY SSF55874 751 916 4.45E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 877 895 3.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 860 3.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 874 3.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 PRINTS PR00344 Bacterial sensor protein C-terminal signature 900 913 3.6E-16 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Gene3D G3DSA:3.30.450.20 300 427 8.3E-13 T 29-03-2018 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SUPERFAMILY SSF55785 418 547 7.12E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Pfam PF08448 PAS fold 567 676 1.1E-8 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Gene3D G3DSA:3.30.450.20 428 550 8.5E-22 T 29-03-2018 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Gene3D G3DSA:3.30.565.10 742 915 1.8E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Gene3D G3DSA:1.10.287.130 677 741 2.3E-7 T 29-03-2018 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SMART SM00091 433 502 3.4 T 29-03-2018 IPR000014 PAS domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SMART SM00091 561 627 8.8E-5 T 29-03-2018 IPR000014 PAS domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Pfam PF00512 His Kinase A (phospho-acceptor) domain 690 756 3.2E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 SUPERFAMILY SSF55785 546 671 2.79E-18 T 29-03-2018 IPR000014 PAS domain AM474_RS21950 e0f377d3da757d6986f913f63340ed6b 922 Pfam PF08447 PAS fold 460 541 1.9E-8 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 Gene3D G3DSA:3.90.20.10 22 224 6.6E-5 T 29-03-2018 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 SUPERFAMILY SSF64518 143 455 6.8E-15 T 29-03-2018 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 SUPERFAMILY SSF64518 502 682 9.81E-22 T 29-03-2018 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 346 5.3E-76 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 PRINTS PR01005 Flagellar hook-associated protein signature 362 384 4.4E-14 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 4.4E-14 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 4.4E-14 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 4.4E-14 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 4.4E-14 T 29-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 AM474_RS24305 bc2d1123dc4b7d3a0e743e411bbca98e 682 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 625 679 1.4E-8 T 29-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AM474_RS08460 548a25a2343ff7b4b299fd02b2bc537a 595 Gene3D G3DSA:3.40.50.1220 5 291 7.9E-19 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS08460 548a25a2343ff7b4b299fd02b2bc537a 595 SUPERFAMILY SSF52467 67 249 6.07E-16 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS08460 548a25a2343ff7b4b299fd02b2bc537a 595 SUPERFAMILY SSF52467 13 39 6.07E-16 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS08460 548a25a2343ff7b4b299fd02b2bc537a 595 Pfam PF13289 SIR2-like domain 131 224 6.4E-13 T 29-03-2018 AM474_RS25200 05f0d13bc93b32fad9c86ce6a39f6ce2 265 Gene3D G3DSA:1.10.12.10 223 265 2.0E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS25200 05f0d13bc93b32fad9c86ce6a39f6ce2 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 264 5.3E-34 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS25200 05f0d13bc93b32fad9c86ce6a39f6ce2 265 Gene3D G3DSA:3.90.226.10 10 222 4.2E-44 T 29-03-2018 AM474_RS25200 05f0d13bc93b32fad9c86ce6a39f6ce2 265 SUPERFAMILY SSF52096 10 265 4.35E-61 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS08165 6655a02242acd74603d1ece996ba42db 340 Gene3D G3DSA:3.40.50.10490 194 340 2.7E-33 T 29-03-2018 AM474_RS08165 6655a02242acd74603d1ece996ba42db 340 Pfam PF01380 SIS domain 43 158 1.1E-13 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS08165 6655a02242acd74603d1ece996ba42db 340 Pfam PF01380 SIS domain 198 281 5.7E-16 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS08165 6655a02242acd74603d1ece996ba42db 340 Gene3D G3DSA:3.40.50.10490 1 170 8.4E-27 T 29-03-2018 AM474_RS08165 6655a02242acd74603d1ece996ba42db 340 SUPERFAMILY SSF53697 5 338 6.92E-66 T 29-03-2018 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 Gene3D G3DSA:1.10.10.60 131 193 5.8E-7 T 29-03-2018 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 Gene3D G3DSA:1.10.10.60 201 247 1.6E-11 T 29-03-2018 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 236 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 Pfam PF12833 Helix-turn-helix domain 162 242 7.5E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 Pfam PF12680 SnoaL-like domain 6 100 3.6E-10 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 Gene3D G3DSA:3.10.450.50 1 109 3.6E-16 T 29-03-2018 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 SUPERFAMILY SSF46689 208 242 6.72E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 SUPERFAMILY SSF54427 2 107 1.26E-16 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS06515 66901baaee591e78cd4b042064a8cd26 247 SMART SM00342 156 240 1.3E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.90.1150.10 237 404 4.9E-51 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 Gene3D G3DSA:3.40.640.10 1 236 1.6E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.6E-234 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 PIRSF PIRSF005572 2 384 4.6E-131 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 Pfam PF00266 Aminotransferase class-V 5 368 4.8E-84 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 SUPERFAMILY SSF53383 5 391 6.12E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS08770 59782e5ebe6157e88a79deff7ede8e8a 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.608 T 29-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 Gene3D G3DSA:3.40.190.10 182 270 1.8E-26 T 29-03-2018 AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 Gene3D G3DSA:1.10.10.10 4 89 5.7E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 Gene3D G3DSA:3.40.190.10 94 181 1.9E-13 T 29-03-2018 AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 SUPERFAMILY SSF46785 7 88 8.16E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 SUPERFAMILY SSF53850 95 297 9.05E-43 T 29-03-2018 AM474_RS24565 072bb930904d3222cf80888fd1398bbc 303 Pfam PF03466 LysR substrate binding domain 94 296 1.1E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14005 43cfa912c2b0d98d9f06fa52190c3e38 201 Gene3D G3DSA:2.60.130.10 2 201 1.4E-48 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS14005 43cfa912c2b0d98d9f06fa52190c3e38 201 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 9 201 5.8E-75 T 29-03-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 AM474_RS14005 43cfa912c2b0d98d9f06fa52190c3e38 201 SUPERFAMILY SSF49482 5 201 1.57E-57 T 29-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM474_RS14005 43cfa912c2b0d98d9f06fa52190c3e38 201 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS14005 43cfa912c2b0d98d9f06fa52190c3e38 201 Pfam PF00775 Dioxygenase 41 191 2.2E-12 T 29-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM474_RS18645 833510b79777576ac7dc2ef51dfaa462 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 117 402 1.9E-46 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS18645 833510b79777576ac7dc2ef51dfaa462 425 Gene3D G3DSA:1.10.3470.10 102 407 3.6E-43 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS18645 833510b79777576ac7dc2ef51dfaa462 425 Pfam PF11862 Domain of unknown function (DUF3382) 13 109 4.7E-20 T 29-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AM474_RS22950 1fbb0d4d169e301682b835e7aa39e523 101 Pfam PF01722 BolA-like protein 12 80 9.7E-24 T 29-03-2018 IPR002634 BolA protein AM474_RS22950 1fbb0d4d169e301682b835e7aa39e523 101 PIRSF PIRSF003113 1 94 5.4E-29 T 29-03-2018 IPR002634 BolA protein AM474_RS22950 1fbb0d4d169e301682b835e7aa39e523 101 Gene3D G3DSA:3.30.300.90 1 87 2.4E-25 T 29-03-2018 AM474_RS22950 1fbb0d4d169e301682b835e7aa39e523 101 SUPERFAMILY SSF82657 3 83 4.32E-28 T 29-03-2018 IPR002634 BolA protein AM474_RS04800 ef9293a9cd0a539382f03a4ca3f164e7 211 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 41.722 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM474_RS04800 ef9293a9cd0a539382f03a4ca3f164e7 211 SUPERFAMILY SSF51366 5 205 1.37E-61 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS04800 ef9293a9cd0a539382f03a4ca3f164e7 211 Gene3D G3DSA:3.20.20.70 3 208 6.5E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04800 ef9293a9cd0a539382f03a4ca3f164e7 211 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 201 1.1E-44 T 29-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AM474_RS09435 e55c00f850d69d27138efa69b3f0b74c 272 Gene3D G3DSA:1.10.3720.10 27 271 1.4E-32 T 29-03-2018 AM474_RS09435 e55c00f850d69d27138efa69b3f0b74c 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 268 1.3E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS09435 e55c00f850d69d27138efa69b3f0b74c 272 SUPERFAMILY SSF161098 76 261 6.8E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF03466 LysR substrate binding domain 91 292 2.2E-57 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 88 177 9.2E-24 T 29-03-2018 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:3.40.190.10 178 264 8.0E-25 T 29-03-2018 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.3E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 Gene3D G3DSA:1.10.10.10 1 85 4.9E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF46785 2 84 6.61E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06365 e22205a348c2331b3d80aa45c4e00a97 308 SUPERFAMILY SSF53850 91 296 6.83E-51 T 29-03-2018 AM474_RS25155 0ebf449772bc69fb5a0a42d8ce8ce758 302 SUPERFAMILY SSF111369 41 185 2.09E-21 T 29-03-2018 AM474_RS25155 0ebf449772bc69fb5a0a42d8ce8ce758 302 Gene3D G3DSA:2.40.50.100 147 289 3.4E-6 T 29-03-2018 AM474_RS25155 0ebf449772bc69fb5a0a42d8ce8ce758 302 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 226 1.2E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS25155 0ebf449772bc69fb5a0a42d8ce8ce758 302 Gene3D G3DSA:2.40.50.100 44 116 1.1E-16 T 29-03-2018 AM474_RS25155 0ebf449772bc69fb5a0a42d8ce8ce758 302 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 213 1.4E-33 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 122 716 4.5E-87 T 29-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 Gene3D G3DSA:3.60.15.10 490 720 1.6E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 222 400 3.4E-21 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 Pfam PF13567 Domain of unknown function (DUF4131) 21 168 1.3E-21 T 29-03-2018 IPR025405 Domain of unknown function DUF4131 AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 Pfam PF03772 Competence protein 201 463 1.2E-53 T 29-03-2018 IPR004477 ComEC/Rec2-related protein AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 Pfam PF00753 Metallo-beta-lactamase superfamily 501 668 8.3E-18 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 SUPERFAMILY SSF56281 496 721 6.86E-41 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04125 4f2f5cb3a2d642de03662c33ecbd916a 741 SMART SM00849 504 687 3.3E-9 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS03000 8ae80c410d40129792fe105c0c41fde0 241 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 45 238 1.6E-84 T 29-03-2018 IPR022293 Integrating conjugative element protein, PFL4693 AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 88 173 1.9E-14 T 29-03-2018 AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF53850 89 299 1.71E-37 T 29-03-2018 AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 Pfam PF03466 LysR substrate binding domain 88 297 6.2E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 SUPERFAMILY SSF46785 3 87 1.14E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:3.40.190.10 174 265 2.2E-15 T 29-03-2018 AM474_RS25625 ece9cd86e014bd5ba0c7fb4532679c46 303 Gene3D G3DSA:1.10.10.10 1 87 2.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29210 61192cbcc3b7e03ddff635d48eb30e0c 216 SMART SM00387 123 214 1.3E-6 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29210 61192cbcc3b7e03ddff635d48eb30e0c 216 Pfam PF07730 Histidine kinase 22 85 2.9E-8 T 29-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 AM474_RS29210 61192cbcc3b7e03ddff635d48eb30e0c 216 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 126 213 4.0E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29210 61192cbcc3b7e03ddff635d48eb30e0c 216 SUPERFAMILY SSF55874 92 212 6.68E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS29210 61192cbcc3b7e03ddff635d48eb30e0c 216 Gene3D G3DSA:3.30.565.10 17 213 3.4E-27 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 Gene3D G3DSA:2.60.40.10 150 245 2.0E-12 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 27 146 6.3E-34 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 SUPERFAMILY SSF49354 23 146 8.37E-34 T 29-03-2018 IPR008962 PapD-like AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 Gene3D G3DSA:2.60.40.10 26 147 5.7E-30 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 PRINTS PR00969 Pili chaperone signature 128 143 1.2E-19 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 PRINTS PR00969 Pili chaperone signature 104 121 1.2E-19 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 PRINTS PR00969 Pili chaperone signature 27 36 1.2E-19 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 PRINTS PR00969 Pili chaperone signature 76 97 1.2E-19 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 235 5.1E-9 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS10290 92dc482fc8dec0f603c814a6aedc3e50 246 SUPERFAMILY SSF49584 140 235 1.2E-10 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 SUPERFAMILY SSF53335 18 253 2.79E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 29-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Gene3D G3DSA:3.40.50.150 12 255 2.4E-48 T 29-03-2018 AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 39.028 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 255 5.9E-99 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM474_RS17555 6a593f91dcc483f7a9f0bd6c6838bbd3 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 2.4E-84 T 29-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 5.2E-52 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 5.2E-52 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 5.2E-52 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 5.2E-52 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.2E-52 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 SMART SM00359 281 364 3.2E-16 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 37.347 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF01472 PUA domain 281 354 9.8E-23 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 PIRSF PIRSF000729 4 372 1.1E-129 T 29-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF53633 9 261 6.41E-69 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 6.0E-130 T 29-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:3.40.1160.10 1 269 4.1E-65 T 29-03-2018 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 Gene3D G3DSA:2.30.130.10 279 371 8.8E-30 T 29-03-2018 IPR002478 PUA domain GO:0003723 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 29-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 SUPERFAMILY SSF88697 280 371 1.6E-24 T 29-03-2018 IPR015947 PUA-like domain AM474_RS20520 1409803a3405e07fa3f066efc2ae5149 372 Pfam PF00696 Amino acid kinase family 10 238 5.5E-47 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 117.113 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 SUPERFAMILY SSF53639 5 203 5.49E-47 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 SMART SM01007 10 198 9.1E-52 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 Gene3D G3DSA:3.40.225.10 1 205 2.0E-45 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 197 2.3E-38 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS27630 c302df8c3b7d518f4159c2aebd2ed93b 205 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 202 3.3E-72 T 29-03-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 Gene3D G3DSA:3.30.830.10 271 465 4.3E-33 T 29-03-2018 AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 Gene3D G3DSA:3.30.830.10 33 257 3.0E-65 T 29-03-2018 AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 Pfam PF05193 Peptidase M16 inactive domain 204 387 1.1E-27 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 SUPERFAMILY SSF63411 37 254 7.83E-61 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 SUPERFAMILY SSF63411 264 459 3.83E-34 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS12850 f796b211343c36e18e7fcd7813d9281f 465 Pfam PF00675 Insulinase (Peptidase family M16) 50 188 7.3E-21 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM474_RS18905 921fd0622c132b737cd690ca044e6570 285 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 263 284 1.6E-8 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM474_RS18905 921fd0622c132b737cd690ca044e6570 285 Pfam PF00005 ABC transporter 60 215 2.7E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18905 921fd0622c132b737cd690ca044e6570 285 Gene3D G3DSA:3.40.50.300 31 284 5.0E-54 T 29-03-2018 AM474_RS18905 921fd0622c132b737cd690ca044e6570 285 SUPERFAMILY SSF52540 44 283 1.67E-53 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18905 921fd0622c132b737cd690ca044e6570 285 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 44 285 2.2E-116 T 29-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD AM474_RS28485 e477dcc0155d923d51ecf9c6a229d872 346 Gene3D G3DSA:3.20.20.70 85 340 3.2E-24 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS28485 e477dcc0155d923d51ecf9c6a229d872 346 PIRSF PIRSF006004 1 346 3.6E-97 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS28485 e477dcc0155d923d51ecf9c6a229d872 346 SUPERFAMILY SSF102114 100 303 7.85E-12 T 29-03-2018 AM474_RS28485 e477dcc0155d923d51ecf9c6a229d872 346 Pfam PF04055 Radical SAM superfamily 102 261 9.6E-11 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 SUPERFAMILY SSF51556 54 353 6.8E-16 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS06245 0922b3b35f218757268059a2996e0328 387 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 387 4.5E-149 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 Gene3D G3DSA:2.30.40.10 1 57 8.9E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 Gene3D G3DSA:2.30.40.10 307 387 2.0E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 Gene3D G3DSA:3.20.20.140 58 306 2.9E-12 T 29-03-2018 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 SUPERFAMILY SSF51338 353 385 7.44E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 SUPERFAMILY SSF51338 3 54 7.44E-11 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 Pfam PF07969 Amidohydrolase family 177 387 4.0E-7 T 29-03-2018 IPR013108 Amidohydrolase 3 AM474_RS06245 0922b3b35f218757268059a2996e0328 387 PIRSF PIRSF038971 3 387 3.0E-146 T 29-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS00010 3ada54f8ab32824fb5513d89e83ca0f0 237 Gene3D G3DSA:3.40.630.30 31 230 2.5E-23 T 29-03-2018 AM474_RS00010 3ada54f8ab32824fb5513d89e83ca0f0 237 SUPERFAMILY SSF55729 35 226 2.88E-21 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS00010 3ada54f8ab32824fb5513d89e83ca0f0 237 Pfam PF13508 Acetyltransferase (GNAT) domain 157 213 8.6E-9 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS23025 d07aa676f487e0816ac013c933847283 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.135 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AM474_RS23025 d07aa676f487e0816ac013c933847283 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 19 110 8.5E-29 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AM474_RS23025 d07aa676f487e0816ac013c933847283 118 SUPERFAMILY SSF55248 16 112 1.7E-33 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AM474_RS23025 d07aa676f487e0816ac013c933847283 118 Gene3D G3DSA:3.30.1360.20 10 114 2.7E-29 T 29-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 AM474_RS25395 e7ff5989ddf7d729a0028ce74eef949b 78 SUPERFAMILY SSF54292 1 77 2.1E-15 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS25395 e7ff5989ddf7d729a0028ce74eef949b 78 Gene3D G3DSA:3.10.20.30 61 78 0.22 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS25395 e7ff5989ddf7d729a0028ce74eef949b 78 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 77 9.4E-17 T 29-03-2018 AM474_RS25395 e7ff5989ddf7d729a0028ce74eef949b 78 Gene3D G3DSA:3.10.20.30 1 60 1.5E-10 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 18 523 62.242 T 29-03-2018 IPR023704 Glucan biosynthesis protein G AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 SUPERFAMILY SSF74650 36 407 3.04E-167 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 36 521 3.0E-200 T 29-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 Gene3D G3DSA:2.60.40.10 411 525 2.1E-41 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 Gene3D G3DSA:2.70.98.10 36 405 7.9E-170 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 SUPERFAMILY SSF81296 411 524 6.16E-31 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS17480 ff22612d4bd49794c32ac4153dd0fb65 525 PIRSF PIRSF006281 2 525 3.4E-244 T 29-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D AM474_RS12755 f0d5917cc7d50daddeb9e900315dec9e 655 Pfam PF00350 Dynamin family 59 273 1.7E-12 T 29-03-2018 IPR022812 Dynamin superfamily AM474_RS12755 f0d5917cc7d50daddeb9e900315dec9e 655 Gene3D G3DSA:3.40.50.300 39 649 8.2E-31 T 29-03-2018 AM474_RS12755 f0d5917cc7d50daddeb9e900315dec9e 655 SUPERFAMILY SSF52540 172 318 1.38E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12755 f0d5917cc7d50daddeb9e900315dec9e 655 SUPERFAMILY SSF52540 44 113 1.38E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 43 52 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 Pfam PF01081 KDPG and KHG aldolase 11 206 1.6E-79 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 131 144 - T 29-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 213 2.7E-86 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 SUPERFAMILY SSF51569 10 213 2.56E-67 T 29-03-2018 AM474_RS05140 7eaee7cc209bb0298f20d37119bafb8b 220 Gene3D G3DSA:3.20.20.70 6 220 2.1E-28 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 SUPERFAMILY SSF46626 105 200 5.67E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Pfam PF00034 Cytochrome c 27 100 9.8E-8 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Pfam PF00034 Cytochrome c 112 199 1.3E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 PIRSF PIRSF000005 1 201 2.2E-62 T 29-03-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 SUPERFAMILY SSF46626 13 99 1.73E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Gene3D G3DSA:1.10.760.10 100 199 8.9E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15295 95eaa55a04ef0dcc2ea73a45f4c8535f 201 Gene3D G3DSA:1.10.760.10 15 99 4.5E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 SUPERFAMILY SSF47648 18 78 7.06E-16 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 Gene3D G3DSA:1.20.970.10 12 79 5.8E-19 T 29-03-2018 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 Gene3D G3DSA:3.40.1030.10 84 324 3.4E-44 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 SUPERFAMILY SSF52418 81 324 1.44E-59 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 Pfam PF00591 Glycosyl transferase family, a/b domain 105 251 2.9E-5 T 29-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS00885 2bf3ca81c50eadfdcc37d2f60570ebb6 327 Pfam PF02885 Glycosyl transferase family, helical bundle domain 22 76 3.4E-17 T 29-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AM474_RS20240 133f21042eb5f45957aa6ad759815fc8 191 SUPERFAMILY SSF53448 8 190 3.99E-28 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS20240 133f21042eb5f45957aa6ad759815fc8 191 Pfam PF12804 MobA-like NTP transferase domain 9 167 2.6E-37 T 29-03-2018 IPR025877 MobA-like NTP transferase AM474_RS20240 133f21042eb5f45957aa6ad759815fc8 191 Gene3D G3DSA:3.90.550.10 2 191 8.2E-32 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 SUPERFAMILY SSF54506 2 277 2.79E-67 T 29-03-2018 AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 1 124 3.6E-29 T 29-03-2018 AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 6.1E-56 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 Pfam PF02567 Phenazine biosynthesis-like protein 7 274 3.0E-85 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 PIRSF PIRSF016184 1 278 9.7E-82 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS28820 fef065bbbff6db9570dfbc43d1b3b80b 278 Gene3D G3DSA:3.10.310.10 125 267 4.5E-34 T 29-03-2018 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Gene3D G3DSA:3.40.1020.10 336 512 1.5E-71 T 29-03-2018 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 314 4.0E-85 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 SUPERFAMILY SSF55021 418 511 4.12E-26 T 29-03-2018 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 SUPERFAMILY SSF55021 335 421 2.06E-28 T 29-03-2018 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 12 511 8.2E-246 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Gene3D G3DSA:3.40.50.1100 164 332 1.4E-41 T 29-03-2018 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 423 511 1.6E-21 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 327 417 2.4E-25 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 SUPERFAMILY SSF53686 17 363 3.01E-109 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS13070 32ce8044f219e42d64b63332571c354d 512 Gene3D G3DSA:3.40.50.1100 11 163 3.4E-46 T 29-03-2018 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 SUPERFAMILY SSF56752 1 303 2.88E-104 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 Gene3D G3DSA:3.30.470.10 1 142 7.8E-41 T 29-03-2018 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 Pfam PF01063 Amino-transferase class IV 36 267 1.5E-54 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 29-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 Gene3D G3DSA:3.20.10.10 143 295 7.3E-51 T 29-03-2018 AM474_RS18105 34791fc7b1fd4444b5594dec1aea2846 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 1.7E-146 T 29-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 AM474_RS27045 1c92e8765b7a3784f0b7712d1201fcf1 183 Gene3D G3DSA:3.30.420.10 2 163 1.2E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS27045 1c92e8765b7a3784f0b7712d1201fcf1 183 SUPERFAMILY SSF53098 2 178 7.06E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS27045 1c92e8765b7a3784f0b7712d1201fcf1 183 SMART SM00479 3 183 1.8E-7 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS27045 1c92e8765b7a3784f0b7712d1201fcf1 183 Pfam PF00929 Exonuclease 5 175 2.1E-18 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS27045 1c92e8765b7a3784f0b7712d1201fcf1 183 Gene3D G3DSA:1.20.5.140 164 176 3.7E-4 T 29-03-2018 AM474_RS18110 57663cefa3f998a8d5735d5d26989416 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 318 5.7E-91 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM474_RS18110 57663cefa3f998a8d5735d5d26989416 345 Gene3D G3DSA:3.40.50.2000 1 149 3.8E-31 T 29-03-2018 AM474_RS18110 57663cefa3f998a8d5735d5d26989416 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 337 3.3E-162 T 29-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 AM474_RS18110 57663cefa3f998a8d5735d5d26989416 345 SUPERFAMILY SSF53756 1 338 2.41E-101 T 29-03-2018 AM474_RS18110 57663cefa3f998a8d5735d5d26989416 345 Gene3D G3DSA:3.40.50.2000 155 340 9.6E-48 T 29-03-2018 AM474_RS28170 a226fff284f5699ed3dc0cff5a4527db 402 Gene3D G3DSA:3.40.190.10 17 110 2.5E-7 T 29-03-2018 AM474_RS28170 a226fff284f5699ed3dc0cff5a4527db 402 Pfam PF13379 NMT1-like family 16 267 4.3E-90 T 29-03-2018 AM474_RS28170 a226fff284f5699ed3dc0cff5a4527db 402 Gene3D G3DSA:3.40.190.10 132 349 6.9E-36 T 29-03-2018 AM474_RS28170 a226fff284f5699ed3dc0cff5a4527db 402 SUPERFAMILY SSF53850 22 257 3.93E-26 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 142 570 1.0E-168 T 29-03-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 373 384 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 SUPERFAMILY SSF54862 206 234 3.0E-33 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 SUPERFAMILY SSF54862 275 460 3.0E-33 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Gene3D G3DSA:3.30.70.20 323 376 1.1E-10 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Gene3D G3DSA:2.60.40.10 455 572 3.9E-25 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Gene3D G3DSA:3.30.70.20 377 390 0.033 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Gene3D G3DSA:3.30.70.20 391 404 0.2 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Pfam PF13746 4Fe-4S dicluster domain 320 426 6.7E-45 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Pfam PF12801 4Fe-4S binding domain 198 227 5.5E-5 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Gene3D G3DSA:3.30.70.20 405 452 0.019 T 29-03-2018 AM474_RS10525 dbaf43c5160484a18f5bea7bd8eb60ad 573 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 455 571 1.8E-27 T 29-03-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AM474_RS03105 50828139a5987f9715dae819e73e1009 315 Pfam PF06834 TraU protein 37 303 1.1E-72 T 29-03-2018 IPR009649 TraU AM474_RS03105 50828139a5987f9715dae819e73e1009 315 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 29 313 5.6E-131 T 29-03-2018 IPR026331 Integrating conjugative element protein PFL_4710 AM474_RS10440 2240164a84ae1a9c2878eb432e3ef470 169 Gene3D G3DSA:1.10.287.900 1 38 2.9E-14 T 29-03-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117 AM474_RS10440 2240164a84ae1a9c2878eb432e3ef470 169 Gene3D G3DSA:3.40.630.30 42 138 4.2E-16 T 29-03-2018 AM474_RS10440 2240164a84ae1a9c2878eb432e3ef470 169 Pfam PF00583 Acetyltransferase (GNAT) family 43 128 9.4E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS10440 2240164a84ae1a9c2878eb432e3ef470 169 SUPERFAMILY SSF55729 2 144 8.78E-24 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS21480 9d2948cb61d1ff78f66b0cade758a56d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 4.1E-24 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM474_RS21480 9d2948cb61d1ff78f66b0cade758a56d 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 119 2.1E-32 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM474_RS21480 9d2948cb61d1ff78f66b0cade758a56d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.042 T 29-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AM474_RS09295 47246368444d8c1393fce3c7fa2cbe05 331 Gene3D G3DSA:3.20.20.150 8 322 8.9E-15 T 29-03-2018 AM474_RS09295 47246368444d8c1393fce3c7fa2cbe05 331 Pfam PF01136 Peptidase family U32 75 330 3.0E-63 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM474_RS09295 47246368444d8c1393fce3c7fa2cbe05 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 Pfam PF00999 Sodium/hydrogen exchanger family 13 377 2.6E-70 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 Gene3D G3DSA:1.20.91.10 232 312 7.7E-15 T 29-03-2018 AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 Pfam PF02254 TrkA-N domain 409 520 8.1E-25 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 SUPERFAMILY SSF51735 407 543 2.8E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 287 2.1E-85 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM474_RS25015 d17023a0b3ddf3b52b7f509969696908 613 Gene3D G3DSA:3.40.50.720 398 522 2.9E-23 T 29-03-2018 AM474_RS11190 9b9df0300477dc738c38223795cda693 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.7E-67 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM474_RS11190 9b9df0300477dc738c38223795cda693 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 29-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11190 9b9df0300477dc738c38223795cda693 156 Gene3D G3DSA:1.10.455.10 6 156 8.0E-60 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM474_RS11190 9b9df0300477dc738c38223795cda693 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 8.4E-68 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11190 9b9df0300477dc738c38223795cda693 156 SUPERFAMILY SSF47973 6 149 7.72E-60 T 29-03-2018 IPR023798 Ribosomal protein S7 domain AM474_RS11190 9b9df0300477dc738c38223795cda693 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.331 T 29-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM474_RS11190 9b9df0300477dc738c38223795cda693 156 PIRSF PIRSF002122 2 156 2.6E-59 T 29-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 203 222 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 400 420 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 84 106 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 294 312 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 340 362 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 PRINTS PR00175 Sodium/alanine symporter signature 175 193 3.8E-47 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 431 1.2E-142 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS30870 14e1b35c5fd0319ceae3fe56b58f3bf8 481 Pfam PF01235 Sodium:alanine symporter family 50 444 6.1E-146 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS01350 119ce16c15057bd6950900ee04906fb0 435 Pfam PF03573 outer membrane porin, OprD family 36 432 7.5E-138 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS01350 119ce16c15057bd6950900ee04906fb0 435 Gene3D G3DSA:2.40.160.10 6 432 1.2E-101 T 29-03-2018 AM474_RS23925 e8ce4ea8bc60f7e2b2effcb8465122a6 128 Gene3D G3DSA:2.40.50.140 58 118 6.1E-6 T 29-03-2018 AM474_RS23925 e8ce4ea8bc60f7e2b2effcb8465122a6 128 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 20 53 7.0E-6 T 29-03-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AM474_RS23925 e8ce4ea8bc60f7e2b2effcb8465122a6 128 SUPERFAMILY SSF50249 14 114 4.45E-18 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS23925 e8ce4ea8bc60f7e2b2effcb8465122a6 128 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 54 109 2.1E-10 T 29-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF53850 90 298 2.53E-38 T 29-03-2018 AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 Pfam PF03466 LysR substrate binding domain 88 295 3.2E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 SUPERFAMILY SSF46785 4 86 6.7E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:3.40.190.10 179 266 9.0E-21 T 29-03-2018 AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:1.10.10.10 2 84 2.0E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09205 bb290e286af74211249a93f90ff6c939 317 Gene3D G3DSA:3.40.190.10 93 178 2.1E-13 T 29-03-2018 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 6.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 6.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 Pfam PF12833 Helix-turn-helix domain 262 339 3.6E-14 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 Gene3D G3DSA:1.10.10.60 283 345 1.1E-12 T 29-03-2018 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 SMART SM00342 256 338 7.8E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 SUPERFAMILY SSF46689 292 341 4.93E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04690 2fdfdd80d12fa19bcd4a8726c02b7696 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 210 6.5E-48 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS23190 7f423246221c43ccde60bb86a99db186 334 Gene3D G3DSA:3.90.1150.10 247 334 2.0E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS23190 7f423246221c43ccde60bb86a99db186 334 Pfam PF01212 Beta-eliminating lyase 5 283 5.0E-95 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM474_RS23190 7f423246221c43ccde60bb86a99db186 334 PIRSF PIRSF017617 1 334 1.5E-133 T 29-03-2018 IPR023603 Threonine aldolase AM474_RS23190 7f423246221c43ccde60bb86a99db186 334 SUPERFAMILY SSF53383 4 332 3.67E-116 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS23190 7f423246221c43ccde60bb86a99db186 334 Gene3D G3DSA:3.40.640.10 1 246 1.9E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 Pfam PF04073 Aminoacyl-tRNA editing domain 30 142 4.2E-16 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 SUPERFAMILY SSF55826 19 145 8.63E-13 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 Gene3D G3DSA:1.10.3210.10 168 463 1.5E-32 T 29-03-2018 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 Gene3D G3DSA:3.90.960.10 9 151 9.4E-9 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 SUPERFAMILY SSF109604 180 452 4.08E-61 T 29-03-2018 AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 PIRSF PIRSF036888 1 466 5.6E-281 T 29-03-2018 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type AM474_RS16080 50a3ad202b6ad97ec6da1badcf459997 469 Pfam PF08668 HDOD domain 195 395 2.4E-45 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 PIRSF PIRSF002741 13 529 1.0E-104 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 Gene3D G3DSA:3.40.190.10 202 297 1.6E-26 T 29-03-2018 AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 Gene3D G3DSA:3.10.105.10 298 503 5.1E-61 T 29-03-2018 AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 SUPERFAMILY SSF53850 27 531 3.55E-147 T 29-03-2018 AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 Gene3D G3DSA:3.90.76.10 36 201 4.6E-36 T 29-03-2018 AM474_RS20900 2bd4b03009c79c2dc39ae24d33a1caf1 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 449 2.0E-98 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.3E-13 T 29-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 260 9.1E-89 T 29-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 Gene3D G3DSA:3.40.710.10 16 299 7.2E-46 T 29-03-2018 AM474_RS23015 0350184aaaad2dc4f42f93c3ffa2af56 310 SUPERFAMILY SSF56601 8 276 2.88E-60 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS16735 0c58af7a70d97ba1f8684d3e18f3eac5 397 Gene3D G3DSA:1.20.1250.20 194 394 1.2E-15 T 29-03-2018 AM474_RS16735 0c58af7a70d97ba1f8684d3e18f3eac5 397 SUPERFAMILY SSF103473 10 379 4.45E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS16735 0c58af7a70d97ba1f8684d3e18f3eac5 397 Gene3D G3DSA:1.20.1250.20 7 191 6.8E-19 T 29-03-2018 AM474_RS16735 0c58af7a70d97ba1f8684d3e18f3eac5 397 Pfam PF07690 Major Facilitator Superfamily 12 346 3.1E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS10805 84d64ddf97f888089b079978b154378b 439 SUPERFAMILY SSF51905 366 401 5.18E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10805 84d64ddf97f888089b079978b154378b 439 SUPERFAMILY SSF51905 37 258 5.18E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10805 84d64ddf97f888089b079978b154378b 439 Gene3D G3DSA:3.50.50.60 27 412 4.2E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10805 84d64ddf97f888089b079978b154378b 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 4.2E-37 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS22490 097852f94367db3e1550b8686897339d 125 Pfam PF16137 Domain of unknown function (DUF4845) 31 116 1.2E-23 T 29-03-2018 IPR032314 Protein of unknown function DUF4845 AM474_RS24155 3190d15dbb9e19607e736dfb60540f36 174 PIRSF PIRSF019239 10 174 7.1E-43 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AM474_RS24155 3190d15dbb9e19607e736dfb60540f36 174 Pfam PF01899 Na+/H+ ion antiporter subunit 21 168 2.8E-43 T 29-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 Gene3D G3DSA:3.40.718.10 30 365 6.1E-37 T 29-03-2018 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 PIRSF PIRSF009407 1 741 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 SUPERFAMILY SSF53659 5 740 0.0 T 29-03-2018 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 740 0.0 T 29-03-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM474_RS00960 4d7f511935de660e53780aba88cc3714 741 Gene3D G3DSA:3.40.718.10 419 714 3.3E-38 T 29-03-2018 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:3.40.50.80 186 316 7.1E-21 T 29-03-2018 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:2.40.30.10 91 185 1.6E-10 T 29-03-2018 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF54292 3 79 5.12E-16 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 68 2.8E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF52343 192 317 5.11E-30 T 29-03-2018 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 SUPERFAMILY SSF63380 92 186 8.9E-14 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 6.4E-11 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 134 6.4E-11 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 6.4E-11 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 284 292 6.4E-11 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 6.4E-11 T 29-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 Gene3D G3DSA:3.10.20.30 1 79 2.9E-10 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS16645 d0775a27f9567cd79d1d968540a0ccb2 322 Pfam PF00175 Oxidoreductase NAD-binding domain 197 297 4.6E-12 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 Gene3D G3DSA:1.10.10.10 1 83 2.3E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 SUPERFAMILY SSF53850 90 295 2.04E-38 T 29-03-2018 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 Gene3D G3DSA:3.40.190.10 89 176 2.0E-21 T 29-03-2018 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 SUPERFAMILY SSF46785 3 86 1.84E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 Gene3D G3DSA:3.40.190.10 177 268 2.9E-28 T 29-03-2018 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.7E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28410 c085a9032dba7cb0f7efc47330b9a090 301 Pfam PF03466 LysR substrate binding domain 88 293 6.2E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS26425 15704a0f5adf481eb987eb14fe23d700 296 SUPERFAMILY SSF103088 127 240 1.7E-30 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS26425 15704a0f5adf481eb987eb14fe23d700 296 Gene3D G3DSA:3.30.1330.60 71 266 6.4E-37 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS26425 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 7.2E-22 T 29-03-2018 IPR025713 Motility protein B, N-terminal domain AM474_RS26425 15704a0f5adf481eb987eb14fe23d700 296 Pfam PF00691 OmpA family 145 234 2.8E-17 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:3.40.50.2300 1 119 2.0E-34 T 29-03-2018 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00862 145 220 6.0E-23 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 SMART SM00448 1 111 8.1E-40 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF52172 1 121 6.12E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 1.2E-101 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.9E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 SUPERFAMILY SSF46894 124 221 2.04E-28 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 Gene3D G3DSA:1.10.10.10 120 224 1.2E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32275 6c40741fde839c074d3fcc96b1b3871a 224 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 Gene3D G3DSA:4.10.1230.10 100 153 2.5E-28 T 29-03-2018 IPR027438 Ecotin, C-terminal AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 SUPERFAMILY SSF49772 23 154 4.19E-54 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 Hamap MF_00706 Ecotin [eco]. 1 156 39.728 T 29-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 PIRSF PIRSF006865 1 156 3.4E-64 T 29-03-2018 IPR005658 Proteinase inhibitor I11, ecotin AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 Gene3D G3DSA:2.60.40.550 22 94 2.2E-31 T 29-03-2018 AM474_RS01995 19141377ce536b32ac9a255fdf42c518 156 Pfam PF03974 Ecotin 26 146 7.4E-51 T 29-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain AM474_RS14505 85ce911bb131dbfab6ad9399148a25cb 234 SUPERFAMILY SSF52833 4 210 1.95E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14505 85ce911bb131dbfab6ad9399148a25cb 234 Pfam PF01323 DSBA-like thioredoxin domain 10 187 1.6E-6 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM474_RS14505 85ce911bb131dbfab6ad9399148a25cb 234 Gene3D G3DSA:3.40.30.10 2 215 4.0E-29 T 29-03-2018 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 SUPERFAMILY SSF56801 19 643 3.92E-128 T 29-03-2018 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Pfam PF00501 AMP-binding enzyme 95 525 3.3E-43 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Gene3D G3DSA:2.30.38.10 444 521 4.7E-4 T 29-03-2018 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Gene3D G3DSA:3.40.50.980 275 433 2.4E-21 T 29-03-2018 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 1.0E-11 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Gene3D G3DSA:3.40.50.980 85 274 1.7E-32 T 29-03-2018 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 2 651 5.0E-278 T 29-03-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 AM474_RS29300 fc4d2c1378657149e4bfeb9d668f16f8 651 Gene3D G3DSA:3.30.300.30 522 626 1.9E-13 T 29-03-2018 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 355 421 5.8E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 Gene3D G3DSA:1.10.760.10 344 634 1.9E-24 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 473 495 5.57E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 354 375 5.57E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 527 571 5.57E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29710 90cc0a508cc4804010de2c3b5ab43951 634 SUPERFAMILY SSF46626 615 634 5.57E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 12 329 36.407 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 11 332 1.6E-118 T 29-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Gene3D G3DSA:2.160.10.10 172 209 4.5E-9 T 29-03-2018 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 SUPERFAMILY SSF51161 35 320 1.75E-80 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Gene3D G3DSA:2.160.10.10 210 350 4.5E-21 T 29-03-2018 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 1.4E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 201 219 6.8E-4 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 225 260 5.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 109 137 - T 29-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 2.0E-22 T 29-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 AM474_RS07590 10ee944eb5eca51c9af3aeb56fbbee5f 353 Gene3D G3DSA:2.160.10.10 93 171 3.4E-19 T 29-03-2018 AM474_RS09720 2dbb6549816e763ef5377f77c32b1e1a 188 Gene3D G3DSA:3.10.450.50 162 184 2.4E-5 T 29-03-2018 AM474_RS09720 2dbb6549816e763ef5377f77c32b1e1a 188 SUPERFAMILY SSF103642 165 182 2.78E-5 T 29-03-2018 AM474_RS09720 2dbb6549816e763ef5377f77c32b1e1a 188 Pfam PF02810 SEC-C motif 166 181 1.1E-5 T 29-03-2018 IPR004027 SEC-C motif AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 Gene3D G3DSA:3.40.50.1820 2 288 2.1E-36 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 Pfam PF12146 Serine aminopeptidase, S33 32 267 2.3E-66 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 SUPERFAMILY SSF53335 400 575 1.5E-14 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 Gene3D G3DSA:3.40.50.150 346 584 5.9E-18 T 29-03-2018 AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 SUPERFAMILY SSF53474 4 282 3.84E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS32375 7ac59ae1d5e4283881abef88bc54c40e 586 Pfam PF12147 Putative methyltransferase 276 583 1.6E-155 T 29-03-2018 IPR022744 Methyltransferase domain, putative AM474_RS19125 76aa5c71a7171d37f21ef129a389e072 324 SUPERFAMILY SSF53448 17 275 6.94E-39 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS19125 76aa5c71a7171d37f21ef129a389e072 324 Pfam PF00535 Glycosyl transferase family 2 18 179 3.8E-27 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS19125 76aa5c71a7171d37f21ef129a389e072 324 Gene3D G3DSA:3.90.550.10 5 229 2.6E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS27830 ccc100c46b7b4c2463b269040eab1019 112 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 26 112 3.8E-27 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AM474_RS27830 ccc100c46b7b4c2463b269040eab1019 112 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 74 112 9.2E-21 T 29-03-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 AM474_RS26975 40f0e9b452475a81ced7f22398fbec4e 352 SUPERFAMILY SSF53335 181 274 2.61E-13 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS26975 40f0e9b452475a81ced7f22398fbec4e 352 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 350 75.524 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM474_RS26975 40f0e9b452475a81ced7f22398fbec4e 352 Pfam PF01728 FtsJ-like methyltransferase 182 275 2.0E-8 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM474_RS26975 40f0e9b452475a81ced7f22398fbec4e 352 Gene3D G3DSA:3.40.50.150 172 351 2.4E-18 T 29-03-2018 AM474_RS26975 40f0e9b452475a81ced7f22398fbec4e 352 PIRSF PIRSF028774 1 352 3.4E-169 T 29-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SUPERFAMILY SSF103515 349 646 5.36E-47 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 32 43 - T 29-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SMART SM00869 370 636 1.9E-36 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 PIRSF PIRSF037375 2 646 1.1E-220 T 29-03-2018 IPR017186 Lipase, autotransporter EstA AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 Gene3D G3DSA:2.40.128.130 339 646 1.2E-49 T 29-03-2018 AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 Gene3D G3DSA:3.40.50.1110 15 338 1.4E-59 T 29-03-2018 AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 32 325 8.3E-14 T 29-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SUPERFAMILY SSF52266 302 330 1.53E-15 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SUPERFAMILY SSF52266 111 121 1.53E-15 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SUPERFAMILY SSF52266 148 265 1.53E-15 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 SUPERFAMILY SSF52266 30 67 1.53E-15 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS17310 4b93af80f61f6ba0e11595608c8b6bec 646 Pfam PF03797 Autotransporter beta-domain 374 626 7.7E-48 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS08000 94b357e1f101436aacb6c5ec962fc773 1746 SUPERFAMILY SSF52540 1280 1437 4.86E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08000 94b357e1f101436aacb6c5ec962fc773 1746 Pfam PF07728 AAA domain (dynein-related subfamily) 1292 1415 5.6E-5 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM474_RS08000 94b357e1f101436aacb6c5ec962fc773 1746 Gene3D G3DSA:3.40.50.300 1022 1438 4.7E-11 T 29-03-2018 AM474_RS08000 94b357e1f101436aacb6c5ec962fc773 1746 Pfam PF12458 ATPase involved in DNA repair 38 485 2.2E-199 T 29-03-2018 IPR020958 DUF3686 AM474_RS20350 8db140ad426896da09bac3f2d1501bf0 479 SUPERFAMILY SSF56954 3 466 2.35E-104 T 29-03-2018 AM474_RS20350 8db140ad426896da09bac3f2d1501bf0 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 464 5.2E-117 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS20350 8db140ad426896da09bac3f2d1501bf0 479 Pfam PF02321 Outer membrane efflux protein 282 462 2.5E-32 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS20350 8db140ad426896da09bac3f2d1501bf0 479 Pfam PF02321 Outer membrane efflux protein 64 253 1.7E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS20350 8db140ad426896da09bac3f2d1501bf0 479 Gene3D G3DSA:1.20.1600.10 20 470 2.8E-94 T 29-03-2018 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SMART SM00304 171 224 2.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SMART SM00388 225 291 1.8E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SUPERFAMILY SSF47384 208 291 9.61E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SUPERFAMILY SSF158472 175 222 4.18E-5 T 29-03-2018 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SMART SM00387 334 442 8.8E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 Gene3D G3DSA:3.30.565.10 296 443 2.4E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.8E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 291 2.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 436 4.5E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 438 4.8E-169 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 SUPERFAMILY SSF55874 280 438 7.99E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS02665 94125f354e6bfdacb108f62b96e88b59 443 Gene3D G3DSA:1.10.287.130 215 287 3.7E-15 T 29-03-2018 AM474_RS03690 6e5a3dc2bfd3e0fd485aba2b146a827b 119 Pfam PF14346 Domain of unknown function (DUF4398) 13 112 1.5E-23 T 29-03-2018 IPR025511 Domain of unknown function DUF4398 AM474_RS00395 154957f1836800422ba03118afc10dd7 253 SUPERFAMILY SSF51735 1 252 9.34E-70 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.0E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 9.1E-52 T 29-03-2018 AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.4E-32 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00395 154957f1836800422ba03118afc10dd7 253 Gene3D G3DSA:3.40.50.720 46 253 2.2E-54 T 29-03-2018 AM474_RS00395 154957f1836800422ba03118afc10dd7 253 Gene3D G3DSA:3.40.50.720 1 45 7.7E-9 T 29-03-2018 AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 4 918 4.4E-283 T 29-03-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 SUPERFAMILY SSF51445 4 177 1.25E-132 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 SUPERFAMILY SSF51445 242 483 1.25E-132 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 SUPERFAMILY SSF51445 520 818 1.25E-132 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 Pfam PF00128 Alpha amylase, catalytic domain 25 94 5.4E-15 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 Gene3D G3DSA:3.20.20.80 9 819 3.2E-107 T 29-03-2018 AM474_RS30150 d5898cde40b0808c7b859ef4ce0af91f 926 SMART SM00642 12 506 2.1E-6 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS19095 6ead7fd87d796c82f4ab9695deb2e09d 258 Gene3D G3DSA:2.40.160.60 49 212 1.3E-4 T 29-03-2018 AM474_RS19095 6ead7fd87d796c82f4ab9695deb2e09d 258 PIRSF PIRSF029691 1 258 7.5E-116 T 29-03-2018 IPR016934 Uncharacterised conserved protein UCP029691 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 SUPERFAMILY SSF53720 17 496 8.51E-167 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 Pfam PF00171 Aldehyde dehydrogenase family 32 492 2.0E-170 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.309.10 283 479 8.2E-73 T 29-03-2018 AM474_RS16250 f01bde15287418f9c33519462185fcff 497 Gene3D G3DSA:3.40.605.10 6 282 1.3E-93 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 111 257 1.31E-37 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 8 246 1.8E-65 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 29-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 Hamap MF_00258 Glutamate racemase [murI]. 6 257 37.126 T 29-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 29-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 SUPERFAMILY SSF53681 8 109 3.6E-32 T 29-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 217 4.3E-37 T 29-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 Gene3D G3DSA:3.40.50.1860 119 264 4.8E-43 T 29-03-2018 AM474_RS20000 d40a0df3071453aa4520b1ef807b6275 265 Gene3D G3DSA:3.40.50.1860 4 118 4.0E-33 T 29-03-2018 AM474_RS28465 98c9e377505fd3b416e7d01502f92fad 165 PIRSF PIRSF030820 1 165 2.2E-67 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AM474_RS28465 98c9e377505fd3b416e7d01502f92fad 165 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 161 4.6E-46 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 Gene3D G3DSA:3.40.50.1100 106 204 1.9E-15 T 29-03-2018 AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 Pfam PF14821 Threonine synthase N terminus 2 80 1.0E-28 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 Gene3D G3DSA:3.90.1380.10 1 88 1.5E-29 T 29-03-2018 IPR029144 Threonine synthase, N-terminal AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 SUPERFAMILY SSF53686 1 461 5.11E-165 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 423 4.0E-80 T 29-03-2018 IPR004450 Threonine synthase-like AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 398 1.1E-24 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 Gene3D G3DSA:3.40.50.1100 205 430 5.9E-85 T 29-03-2018 AM474_RS08040 7d8efa6e755c858d21ca8fe2391242a2 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF53850 104 312 7.19E-39 T 29-03-2018 AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 2.6E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 SUPERFAMILY SSF46785 13 123 1.47E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 103 194 1.5E-21 T 29-03-2018 AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:1.10.10.10 9 96 8.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 Pfam PF03466 LysR substrate binding domain 103 308 1.3E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS30355 608385dd7dd911a1f27e3f034bac04c1 315 Gene3D G3DSA:3.40.190.10 195 282 8.3E-18 T 29-03-2018 AM474_RS10260 40197a253c9d9f6e5d3413d62f1d3382 68 SMART SM00530 4 59 2.8E-18 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS10260 40197a253c9d9f6e5d3413d62f1d3382 68 Pfam PF01381 Helix-turn-helix 5 57 2.0E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS10260 40197a253c9d9f6e5d3413d62f1d3382 68 SUPERFAMILY SSF47413 3 64 2.06E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS10260 40197a253c9d9f6e5d3413d62f1d3382 68 Gene3D G3DSA:3.30.1190.10 25 67 1.1E-11 T 29-03-2018 AM474_RS10260 40197a253c9d9f6e5d3413d62f1d3382 68 Gene3D G3DSA:1.10.10.60 2 24 1.6E-7 T 29-03-2018 AM474_RS00020 5e93feb8edc1fdba792dfd5fe51240f0 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 134 9.9E-13 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS00020 5e93feb8edc1fdba792dfd5fe51240f0 143 Gene3D G3DSA:3.10.180.10 1 136 9.0E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00020 5e93feb8edc1fdba792dfd5fe51240f0 143 SUPERFAMILY SSF54593 10 134 1.09E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00280 40363c90e9243b15646c4c5e91a2a949 356 SUPERFAMILY SSF56645 5 83 1.31E-7 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00280 40363c90e9243b15646c4c5e91a2a949 356 Gene3D G3DSA:1.10.540.10 1 96 6.3E-8 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00280 40363c90e9243b15646c4c5e91a2a949 356 SUPERFAMILY SSF47203 194 328 1.1E-25 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00280 40363c90e9243b15646c4c5e91a2a949 356 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 196 306 2.0E-14 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS00280 40363c90e9243b15646c4c5e91a2a949 356 Gene3D G3DSA:1.20.140.10 190 309 2.3E-21 T 29-03-2018 AM474_RS01835 c678f4773054106ccc40bcea94f6df19 302 SUPERFAMILY SSF50956 2 300 3.4E-40 T 29-03-2018 AM474_RS01835 c678f4773054106ccc40bcea94f6df19 302 Pfam PF06977 SdiA-regulated 40 298 4.8E-91 T 29-03-2018 IPR009722 SdiA-regulated AM474_RS01835 c678f4773054106ccc40bcea94f6df19 302 Gene3D G3DSA:2.120.10.30 21 301 1.1E-13 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS04195 11a5105bd99235a39c3b9b6596367233 261 Pfam PF04205 FMN-binding domain 146 244 4.7E-13 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS04195 11a5105bd99235a39c3b9b6596367233 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 5 259 35.444 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM474_RS04195 11a5105bd99235a39c3b9b6596367233 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 255 5.4E-93 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM474_RS04195 11a5105bd99235a39c3b9b6596367233 261 SMART SM00900 146 247 4.5E-31 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS04195 11a5105bd99235a39c3b9b6596367233 261 PIRSF PIRSF009437 1 261 4.4E-105 T 29-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 Pfam PF03486 HI0933-like protein 11 403 8.4E-111 T 29-03-2018 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 SUPERFAMILY SSF51905 12 200 1.03E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 SUPERFAMILY SSF51905 349 408 1.03E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 33 409 4.7E-160 T 29-03-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 Gene3D G3DSA:3.50.50.60 11 404 3.7E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 12 402 9.0E-86 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 9.5E-5 T 29-03-2018 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 373 380 9.5E-5 T 29-03-2018 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 174 9.5E-5 T 29-03-2018 AM474_RS09505 2c1b9fa3e182e4494bc113b09cee4632 413 SUPERFAMILY SSF160996 210 350 4.71E-11 T 29-03-2018 AM474_RS16820 0796bdf359e9be9dbb2dba89dc720cd0 129 Gene3D G3DSA:3.10.129.10 4 127 8.3E-32 T 29-03-2018 AM474_RS16820 0796bdf359e9be9dbb2dba89dc720cd0 129 Pfam PF03061 Thioesterase superfamily 44 119 2.2E-21 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS16820 0796bdf359e9be9dbb2dba89dc720cd0 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 126 2.1E-22 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS16820 0796bdf359e9be9dbb2dba89dc720cd0 129 SUPERFAMILY SSF54637 10 128 3.16E-35 T 29-03-2018 IPR029069 HotDog domain AM474_RS09910 ce2041c1e2b1a2b24f0cab3b8808c9dc 407 Gene3D G3DSA:3.40.50.1820 5 284 1.5E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS09910 ce2041c1e2b1a2b24f0cab3b8808c9dc 407 SUPERFAMILY SSF53474 21 283 4.69E-38 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS09910 ce2041c1e2b1a2b24f0cab3b8808c9dc 407 Pfam PF00561 alpha/beta hydrolase fold 40 270 4.0E-13 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 6.7E-46 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 3.9E-116 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 5.3E-29 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 5.3E-29 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 5.3E-29 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 5.3E-29 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 5.3E-29 T 29-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.2E-27 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 5.2E-27 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 5.2E-27 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 5.2E-27 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 8.3E-50 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 2 159 2.1E-58 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 Gene3D G3DSA:3.40.50.1370 160 301 2.1E-50 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.575 T 29-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AM474_RS07010 acd0dad31c2287b8f44f8171641f1e87 305 SUPERFAMILY SSF53671 2 300 1.07E-103 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS11160 b8e51c0942d9744f3541a24c81218d3c 99 SUPERFAMILY SSF54189 1 91 1.62E-29 T 29-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11160 b8e51c0942d9744f3541a24c81218d3c 99 Gene3D G3DSA:3.30.70.330 5 99 4.3E-30 T 29-03-2018 AM474_RS11160 b8e51c0942d9744f3541a24c81218d3c 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.008 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM474_RS11160 b8e51c0942d9744f3541a24c81218d3c 99 Pfam PF00276 Ribosomal protein L23 8 94 9.3E-31 T 29-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM474_RS31785 07aaf51ca211ecb012fed1058bfd2e8e 346 SMART SM00244 38 242 2.5E-4 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31785 07aaf51ca211ecb012fed1058bfd2e8e 346 Pfam PF01145 SPFH domain / Band 7 family 42 259 4.3E-21 T 29-03-2018 IPR001107 Band 7 domain AM474_RS28115 8b4bb87e96a644f17480c6d8a4e72b62 274 Gene3D G3DSA:2.30.30.60 225 273 2.7E-8 T 29-03-2018 AM474_RS28115 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF05552 Conserved TM helix 109 154 1.2E-8 T 29-03-2018 IPR008910 Conserved TM helix AM474_RS28115 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF05552 Conserved TM helix 14 60 7.4E-13 T 29-03-2018 IPR008910 Conserved TM helix AM474_RS28115 8b4bb87e96a644f17480c6d8a4e72b62 274 SUPERFAMILY SSF50182 219 272 5.56E-7 T 29-03-2018 IPR010920 LSM domain AM474_RS28115 8b4bb87e96a644f17480c6d8a4e72b62 274 Pfam PF00924 Mechanosensitive ion channel 184 271 7.3E-9 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS09795 84f8b0b1677d5afb681c1e092aee442f 511 Gene3D G3DSA:3.60.110.10 222 504 4.8E-43 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS09795 84f8b0b1677d5afb681c1e092aee442f 511 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 489 22.909 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM474_RS09795 84f8b0b1677d5afb681c1e092aee442f 511 SUPERFAMILY SSF56317 221 484 9.29E-47 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS09795 84f8b0b1677d5afb681c1e092aee442f 511 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 2.5E-97 T 29-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AM474_RS09795 84f8b0b1677d5afb681c1e092aee442f 511 Pfam PF00795 Carbon-nitrogen hydrolase 231 467 1.2E-28 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 Gene3D G3DSA:2.40.50.100 207 321 1.6E-8 T 29-03-2018 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 Gene3D G3DSA:2.40.50.100 55 133 2.0E-13 T 29-03-2018 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 286 5.0E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 Pfam PF00529 HlyD membrane-fusion protein of T1SS 33 341 6.9E-15 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 SUPERFAMILY SSF111369 163 263 1.2E-9 T 29-03-2018 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 SUPERFAMILY SSF56954 17 206 4.18E-7 T 29-03-2018 AM474_RS17050 fd305e1ff4c990ea03c9f94b1cd7a643 394 Gene3D G3DSA:1.10.287.470 134 177 3.9E-12 T 29-03-2018 AM474_RS05180 3918db6577d295cc521b051ef6dc9979 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 274 1.9E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05180 3918db6577d295cc521b051ef6dc9979 281 SUPERFAMILY SSF161098 13 281 2.24E-61 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05180 3918db6577d295cc521b051ef6dc9979 281 Gene3D G3DSA:1.10.3720.10 9 268 1.4E-35 T 29-03-2018 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Gene3D G3DSA:1.10.45.10 549 596 1.6E-17 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 SUPERFAMILY SSF56176 62 271 7.01E-35 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 54 4.1E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Pfam PF01565 FAD binding domain 92 211 2.7E-12 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Gene3D G3DSA:3.30.465.10 142 288 1.3E-11 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Pfam PF09129 Cholesterol oxidase, substrate-binding 277 597 2.8E-158 T 29-03-2018 IPR015213 Cholesterol oxidase, substrate-binding AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Gene3D G3DSA:3.40.462.10 289 547 1.6E-88 T 29-03-2018 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 SUPERFAMILY SSF55103 277 597 9.81E-159 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS10575 f356161d1568416d95a19ee18191b59f 597 Gene3D G3DSA:3.30.43.10 70 141 6.9E-14 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS10490 7ad0fd59df6317af2474c72fde7315db 307 SUPERFAMILY SSF53213 12 280 5.1E-50 T 29-03-2018 AM474_RS10490 7ad0fd59df6317af2474c72fde7315db 307 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 282 1.7E-138 T 29-03-2018 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase GO:0008687 KEGG: 00350+1.13.11.15 AM474_RS10490 7ad0fd59df6317af2474c72fde7315db 307 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 280 9.7E-80 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM474_RS10490 7ad0fd59df6317af2474c72fde7315db 307 Gene3D G3DSA:3.40.830.10 2 276 6.3E-52 T 29-03-2018 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 Pfam PF02445 Quinolinate synthetase A protein 34 339 2.9E-104 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 Gene3D G3DSA:3.40.50.10800 211 322 2.7E-36 T 29-03-2018 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 Gene3D G3DSA:3.40.50.10800 24 111 2.0E-18 T 29-03-2018 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 SUPERFAMILY SSF142754 31 340 1.31E-109 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 Gene3D G3DSA:3.40.50.10800 116 210 1.2E-20 T 29-03-2018 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 70.659 T 29-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM474_RS23860 5e00f864aadf732083f75e82db527fce 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 30 341 4.5E-111 T 29-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 Gene3D G3DSA:1.20.1250.20 229 425 1.3E-22 T 29-03-2018 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 Pfam PF07690 Major Facilitator Superfamily 266 420 3.7E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 26 412 2.6E-139 T 29-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 Pfam PF00083 Sugar (and other) transporter 21 217 2.1E-24 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 Gene3D G3DSA:1.20.1250.20 13 228 9.3E-24 T 29-03-2018 AM474_RS13640 22367cdd5ba23e1f8122783a9ac76ed4 432 SUPERFAMILY SSF103473 12 424 8.37E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS06090 61d881575381da3afd518e37352a4a18 232 Gene3D G3DSA:3.90.1210.10 106 170 2.9E-11 T 29-03-2018 AM474_RS06090 61d881575381da3afd518e37352a4a18 232 SMART SM00858 107 169 1.7E-9 T 29-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AM474_RS06090 61d881575381da3afd518e37352a4a18 232 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 230 5.5E-62 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM474_RS06090 61d881575381da3afd518e37352a4a18 232 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 95 231 1.3E-39 T 29-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 4.3E-9 T 29-03-2018 AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:3.10.20.30 1 104 1.9E-30 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 227 3.9E-84 T 29-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 Gene3D G3DSA:1.10.1060.10 105 235 2.5E-30 T 29-03-2018 AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF46548 105 232 2.27E-38 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 SUPERFAMILY SSF54292 2 104 3.3E-26 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS27095 6ae7f5bc8a7f913dc65b62672520ab51 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 108 1.9E-30 T 29-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SUPERFAMILY SSF48452 466 810 9.1E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SUPERFAMILY SSF48452 472 584 1.67E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 859 875 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 875 887 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 845 859 1.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SUPERFAMILY SSF46894 834 905 3.74E-20 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 Gene3D G3DSA:1.25.40.10 461 841 8.7E-35 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 ProSitePatterns PS00622 LuxR-type HTH domain signature. 859 886 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SMART SM00421 842 899 4.5E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 Gene3D G3DSA:1.10.10.10 844 905 2.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 Pfam PF00196 Bacterial regulatory proteins, luxR family 844 898 9.9E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SUPERFAMILY SSF52540 120 247 1.72E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 SUPERFAMILY SSF52540 27 86 1.72E-9 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09355 8ae6e6395b04d4b802a6613664566709 906 Gene3D G3DSA:3.40.50.300 33 313 3.1E-8 T 29-03-2018 AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 445 1.6E-7 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:1.10.287.130 217 293 4.5E-4 T 29-03-2018 AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF55874 308 445 2.23E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00387 343 448 1.0E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 SUPERFAMILY SSF47384 221 292 1.37E-6 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 SMART SM00388 238 300 5.6E-4 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 Gene3D G3DSA:3.30.565.10 304 448 7.5E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 6.2E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS24840 f1016aa9a8f1ad42db733ab51b452e23 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 6.2E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS12240 80046c4f83ce18a6e1faa554f75d629b 241 Pfam PF00156 Phosphoribosyl transferase domain 143 238 4.8E-7 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS12240 80046c4f83ce18a6e1faa554f75d629b 241 SUPERFAMILY SSF53271 47 239 4.2E-32 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS12240 80046c4f83ce18a6e1faa554f75d629b 241 Gene3D G3DSA:3.40.50.2020 80 241 2.4E-30 T 29-03-2018 AM474_RS16405 887865920fdafc3996e5b3a635cd35f3 389 Gene3D G3DSA:1.20.1250.20 199 388 0.0021 T 29-03-2018 AM474_RS16405 887865920fdafc3996e5b3a635cd35f3 389 Gene3D G3DSA:1.20.1250.20 3 192 7.4E-21 T 29-03-2018 AM474_RS16405 887865920fdafc3996e5b3a635cd35f3 389 SUPERFAMILY SSF103473 5 381 1.96E-29 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS16405 887865920fdafc3996e5b3a635cd35f3 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS16405 887865920fdafc3996e5b3a635cd35f3 389 Pfam PF07690 Major Facilitator Superfamily 11 331 3.2E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS22960 0e57432f3c9fb40ab800fa9cb192f09c 200 SUPERFAMILY SSF52833 1 196 9.62E-37 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS22960 0e57432f3c9fb40ab800fa9cb192f09c 200 Pfam PF01323 DSBA-like thioredoxin domain 1 175 6.5E-14 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM474_RS22960 0e57432f3c9fb40ab800fa9cb192f09c 200 Gene3D G3DSA:3.40.30.10 1 197 4.7E-36 T 29-03-2018 AM474_RS10130 2dc0859e4533e7c3d3f9b09f400300cc 159 Pfam PF01029 NusB family 22 146 6.5E-34 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS10130 2dc0859e4533e7c3d3f9b09f400300cc 159 Gene3D G3DSA:1.10.940.10 16 153 3.6E-41 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS10130 2dc0859e4533e7c3d3f9b09f400300cc 159 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 19 150 23.07 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM474_RS10130 2dc0859e4533e7c3d3f9b09f400300cc 159 SUPERFAMILY SSF48013 19 150 3.14E-43 T 29-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM474_RS10130 2dc0859e4533e7c3d3f9b09f400300cc 159 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 4.2E-44 T 29-03-2018 IPR011605 NusB antitermination factor GO:0006353 AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 Gene3D G3DSA:3.40.50.300 477 640 5.6E-38 T 29-03-2018 AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 SUPERFAMILY SSF52540 167 403 7.1E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 SUPERFAMILY SSF52540 404 656 2.74E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 SMART SM00487 188 372 7.9E-33 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 Pfam PF00271 Helicase conserved C-terminal domain 493 602 4.5E-17 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 SMART SM00490 522 602 2.3E-21 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 Pfam PF00176 SNF2 family N-terminal domain 210 475 9.7E-64 T 29-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AM474_RS22650 48dbf3d6f2ef40b52d587e3a1165a3a2 663 Gene3D G3DSA:3.40.50.10810 168 412 2.8E-54 T 29-03-2018 AM474_RS21160 d6ea4325e9c8a420afed33d8203f3704 252 SUPERFAMILY SSF102705 5 251 3.01E-79 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM474_RS21160 d6ea4325e9c8a420afed33d8203f3704 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 251 1.0E-61 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM474_RS21160 d6ea4325e9c8a420afed33d8203f3704 252 Gene3D G3DSA:3.40.1390.30 1 111 7.7E-27 T 29-03-2018 AM474_RS21160 d6ea4325e9c8a420afed33d8203f3704 252 Gene3D G3DSA:3.40.1390.30 112 223 5.4E-36 T 29-03-2018 AM474_RS21160 d6ea4325e9c8a420afed33d8203f3704 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 12 240 1.1E-57 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM474_RS08895 52833517acaa2089fe7b4724e694cad4 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS08895 52833517acaa2089fe7b4724e694cad4 264 SUPERFAMILY SSF52540 1 233 8.48E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS08895 52833517acaa2089fe7b4724e694cad4 264 SMART SM00382 31 225 8.5E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS08895 52833517acaa2089fe7b4724e694cad4 264 Pfam PF00005 ABC transporter 22 177 7.3E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS08895 52833517acaa2089fe7b4724e694cad4 264 Gene3D G3DSA:3.40.50.300 1 241 9.0E-53 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 2354 2608 6.56E-44 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF53474 4720 4983 2.65E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF47336 1022 1095 3.66E-20 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2472 2629 1.2E-45 T 29-03-2018 IPR010060 Non-ribosomal peptide synthase AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 509 666 5.6E-48 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 1567 1724 9.1E-45 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 4136 4290 9.9E-45 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.559.10 3679 3884 6.8E-38 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.559.10 2623 2825 1.3E-38 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00550 Phosphopantetheine attachment site 2094 2154 2.8E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00550 Phosphopantetheine attachment site 1032 1094 3.1E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00550 Phosphopantetheine attachment site 3595 3657 4.4E-14 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00550 Phosphopantetheine attachment site 4656 4719 3.9E-11 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 3700 3870 5.34E-44 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2117 2132 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:1.10.1200.10 3598 3669 2.5E-20 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 2642 2812 2.33E-42 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3234 3245 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:1.10.1200.10 4659 4724 2.1E-17 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00668 Condensation domain 49 498 8.9E-111 T 29-03-2018 IPR001242 Condensation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00668 Condensation domain 1116 1553 1.2E-106 T 29-03-2018 IPR001242 Condensation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00668 Condensation domain 2173 2613 7.9E-80 T 29-03-2018 IPR001242 Condensation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00668 Condensation domain 2637 3073 1.4E-87 T 29-03-2018 IPR001242 Condensation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00668 Condensation domain 3696 4123 1.6E-77 T 29-03-2018 IPR001242 Condensation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00975 Thioesterase domain 4741 4850 1.4E-25 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF47336 3586 3656 7.46E-18 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1718 1729 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:2.30.38.10 3391 3481 1.3E-23 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SMART SM00823 Phosphopantetheine attachment site 3594 3662 7.8E-4 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SMART SM00823 Phosphopantetheine attachment site 1029 1098 2.2E-4 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SMART SM00823 Phosphopantetheine attachment site 4653 4724 0.81 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SMART SM00823 Phosphopantetheine attachment site 2093 2161 2.2E-5 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.1820 4734 4986 1.0E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 234 486 3.56E-63 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1053 1068 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 3086 3237 6.1E-45 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4677 4692 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:1.10.1200.10 338 506 0.57 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 4291 4448 6.3E-31 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 3238 3390 2.7E-37 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 1725 1885 2.4E-39 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.40.50.980 667 821 2.6E-38 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.300.30 4539 4658 3.6E-39 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.300.30 907 1036 2.8E-38 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.300.30 3484 3597 8.2E-38 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.300.30 1977 2098 4.0E-43 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF47336 4645 4718 4.32E-16 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4285 4296 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF56801 4128 4666 2.22E-147 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 3872 4114 4.56E-48 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.559.10 23 251 3.7E-52 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.559.10 1095 1311 5.5E-45 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:3.30.559.10 2157 2371 6.2E-34 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:2.30.38.10 4456 4537 1.4E-18 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF56801 477 1042 2.49E-158 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:2.30.38.10 822 905 6.9E-24 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 1294 1539 5.34E-63 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 1116 1288 1.56E-53 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 2168 2367 7.67E-43 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1598 2006 5.1E-136 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3115 3513 1.4E-139 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 539 936 7.0E-131 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4165 4568 5.0E-118 T 29-03-2018 IPR010071 Amino acid adenylation domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3618 3633 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF56801 3051 3606 1.7E-164 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 2814 3080 3.34E-55 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF52777 52 228 1.33E-51 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:2.30.38.10 1891 1972 5.3E-21 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:1.10.1200.10 2099 2156 1.7E-22 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF56801 1533 2106 4.45E-166 T 29-03-2018 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 SUPERFAMILY SSF47336 2085 2155 3.8E-19 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00501 AMP-binding enzyme 518 912 1.4E-100 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00501 AMP-binding enzyme 3093 3489 2.1E-101 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00501 AMP-binding enzyme 1577 1982 1.9E-100 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF00501 AMP-binding enzyme 4146 4544 2.0E-83 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF13193 AMP-binding enzyme C-terminal domain 4552 4628 1.5E-11 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF13193 AMP-binding enzyme C-terminal domain 920 1003 1.4E-9 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF13193 AMP-binding enzyme C-terminal domain 3497 3568 5.0E-12 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Pfam PF13193 AMP-binding enzyme C-terminal domain 1990 2067 3.7E-13 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS31595 504f40e7b8134e1a08dfa67bf8719f60 4993 Gene3D G3DSA:1.10.1200.10 1037 1094 2.7E-23 T 29-03-2018 AM474_RS21015 eda450410fe687afb883d5b0bb651ec8 480 Pfam PF01523 Putative modulator of DNA gyrase 38 330 1.3E-69 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS21015 eda450410fe687afb883d5b0bb651ec8 480 SUPERFAMILY SSF111283 26 478 4.05E-132 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS21015 eda450410fe687afb883d5b0bb651ec8 480 PIRSF PIRSF004919 20 479 1.0E-140 T 29-03-2018 IPR025502 TldD AM474_RS21015 eda450410fe687afb883d5b0bb651ec8 480 Gene3D G3DSA:3.30.2290.10 23 238 7.1E-59 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 Pfam PF00583 Acetyltransferase (GNAT) family 15 125 1.9E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 Gene3D G3DSA:3.40.630.30 76 142 1.9E-20 T 29-03-2018 AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 SUPERFAMILY SSF55729 1 146 5.66E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 Gene3D G3DSA:3.40.630.30 1 75 2.8E-12 T 29-03-2018 AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 Gene3D G3DSA:3.90.70.10 164 364 7.6E-20 T 29-03-2018 AM474_RS29025 cdd940624c0545ad4f77b1001429ee47 365 Pfam PF11814 Peptidase_C39 like family 159 361 8.1E-92 T 29-03-2018 IPR021770 Protein of unknown function DUF3335 AM474_RS20205 cd2af3498a7bf1ea366ef96ae7a5e611 129 Gene3D G3DSA:3.40.50.720 8 128 5.3E-4 T 29-03-2018 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 82 98 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 Gene3D G3DSA:1.20.1250.20 238 444 1.0E-24 T 29-03-2018 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 Gene3D G3DSA:1.20.1250.20 17 218 2.7E-37 T 29-03-2018 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 Pfam PF07690 Major Facilitator Superfamily 33 343 1.1E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS32005 0f63f4440a5a1b2dfe37b7dbc8c033c3 448 SUPERFAMILY SSF103473 1 442 1.7E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 145 5.1E-25 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 SUPERFAMILY SSF50129 7 185 5.78E-56 T 29-03-2018 IPR011032 GroES-like AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 Gene3D G3DSA:3.40.50.720 179 343 2.2E-16 T 29-03-2018 AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 SUPERFAMILY SSF51735 163 361 5.76E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS03235 7ffe16923aaf66ecaf5c4dafd086d5d3 404 Gene3D G3DSA:3.90.180.10 3 178 7.1E-31 T 29-03-2018 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 Pfam PF00455 DeoR C terminal sensor domain 75 231 1.9E-47 T 29-03-2018 IPR014036 DeoR C-terminal sensor domain AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.6E-17 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.3E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.3E-9 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 SMART SM00420 6 58 9.2E-16 T 29-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 Gene3D G3DSA:3.40.50.1360 71 248 7.6E-39 T 29-03-2018 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 SMART SM01134 73 232 4.7E-63 T 29-03-2018 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 SUPERFAMILY SSF46785 4 77 2.25E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 SUPERFAMILY SSF100950 75 232 4.71E-26 T 29-03-2018 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 29-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AM474_RS26570 ff37453ee3e286a1d84ebed6d8f67032 258 Gene3D G3DSA:1.10.10.10 1 70 3.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 Gene3D G3DSA:3.30.1330.10 1 144 5.5E-39 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 3.2E-24 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 Gene3D G3DSA:3.90.650.10 145 317 8.4E-35 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 1.7E-93 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 SUPERFAMILY SSF55326 1 138 2.36E-34 T 29-03-2018 IPR016188 PurM-like, N-terminal domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 SUPERFAMILY SSF56042 143 303 1.42E-33 T 29-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 PIRSF PIRSF005303 1 317 2.8E-76 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM474_RS10125 1790557dce9a4538b5d74cf493453c0a 322 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 314 29.397 T 29-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 78 147 6.6E-25 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 SUPERFAMILY SSF101801 74 155 1.2E-25 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 74 149 3.3E-33 T 29-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 123 2.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 93 2.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 94 110 2.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 PRINTS PR00956 Flagellar motor switch protein FliN signature 123 138 2.6E-28 T 29-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 AM474_RS26340 6a3863419ff7d96e882de88b4e0339cb 157 Gene3D G3DSA:2.30.330.10 70 157 1.5E-29 T 29-03-2018 IPR001543 Surface presentation of antigen (SpoA) AM474_RS26530 1f7c1da9ed112c209c3b3f65d410535e 407 SMART SM00028 221 254 17.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS26530 1f7c1da9ed112c209c3b3f65d410535e 407 SMART SM00028 150 183 0.49 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS26530 1f7c1da9ed112c209c3b3f65d410535e 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 1.8E-30 T 29-03-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI AM474_RS26530 1f7c1da9ed112c209c3b3f65d410535e 407 Gene3D G3DSA:1.25.40.10 133 281 9.0E-21 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS26530 1f7c1da9ed112c209c3b3f65d410535e 407 SUPERFAMILY SSF48452 138 247 4.24E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 88 175 1.1E-21 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 SUPERFAMILY SSF56770 44 190 6.54E-64 T 29-03-2018 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 28 182 42.636 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 149 165 - T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 47 183 5.6E-68 T 29-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01035 0603bd0c7e77b4f31eac8a17df317b83 225 Gene3D G3DSA:3.40.50.700 37 206 2.5E-38 T 29-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS00155 7436e81a0b86d2d51fb124db67047038 122 PIRSF PIRSF020485 1 122 2.2E-73 T 29-03-2018 IPR012905 PA-IL-like AM474_RS00155 7436e81a0b86d2d51fb124db67047038 122 Gene3D G3DSA:2.60.120.430 4 120 1.1E-22 T 29-03-2018 AM474_RS00155 7436e81a0b86d2d51fb124db67047038 122 Pfam PF07828 PA-IL-like protein 2 122 5.7E-71 T 29-03-2018 IPR012905 PA-IL-like AM474_RS00155 7436e81a0b86d2d51fb124db67047038 122 SUPERFAMILY SSF49785 2 122 5.78E-64 T 29-03-2018 IPR008979 Galactose-binding domain-like AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 Gene3D G3DSA:3.40.190.10 100 181 3.8E-17 T 29-03-2018 AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 Pfam PF03466 LysR substrate binding domain 97 285 8.0E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 Gene3D G3DSA:1.10.10.10 6 93 2.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 Gene3D G3DSA:3.40.190.10 182 263 2.6E-13 T 29-03-2018 AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 SUPERFAMILY SSF46785 9 119 1.58E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09845 a451829fef6f3769d04169f34e460b8b 297 SUPERFAMILY SSF53850 97 289 3.41E-30 T 29-03-2018 AM474_RS11460 b0e333c8e47add9ec2a09e8eb822d847 164 Pfam PF16460 Phage tail tube, TTP, lambda-like 25 161 8.0E-84 T 29-03-2018 IPR032495 Phage tail tube protein, lambda-like AM474_RS29425 5a169163331e18852ead0b2b3de59b81 74 SUPERFAMILY SSF141447 1 74 9.55E-31 T 29-03-2018 AM474_RS29425 5a169163331e18852ead0b2b3de59b81 74 Pfam PF11462 Protein of unknown function (DUF3203) 1 74 5.7E-35 T 29-03-2018 IPR021564 Protein of unknown function DUF3203 AM474_RS30625 13e8ceb2a47fa688f6d0c557120bb0dd 205 Gene3D G3DSA:1.10.10.10 28 89 6.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08150 54029caa2f936d9ceb35701a7e186b61 166 SUPERFAMILY SSF141523 30 165 4.19E-24 T 29-03-2018 AM474_RS08150 54029caa2f936d9ceb35701a7e186b61 166 Gene3D G3DSA:2.40.440.10 24 165 1.7E-22 T 29-03-2018 AM474_RS08150 54029caa2f936d9ceb35701a7e186b61 166 Pfam PF03734 L,D-transpeptidase catalytic domain 31 164 1.3E-18 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM474_RS00425 8caeab56e4edd3eaa1f7dde2a0c2aef6 391 SUPERFAMILY SSF103473 14 389 1.12E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00425 8caeab56e4edd3eaa1f7dde2a0c2aef6 391 Gene3D G3DSA:1.20.1250.20 209 389 1.1E-20 T 29-03-2018 AM474_RS00425 8caeab56e4edd3eaa1f7dde2a0c2aef6 391 Pfam PF07690 Major Facilitator Superfamily 18 273 4.6E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00425 8caeab56e4edd3eaa1f7dde2a0c2aef6 391 Gene3D G3DSA:1.20.1250.20 11 201 3.5E-18 T 29-03-2018 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 SUPERFAMILY SSF102114 56 322 9.03E-68 T 29-03-2018 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 PIRSF PIRSF005963 6 327 3.1E-128 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 Gene3D G3DSA:3.20.20.70 50 317 6.5E-26 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 TIGRFAM TIGR00510 lipA: lipoyl synthase 38 321 8.6E-128 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 Pfam PF04055 Radical SAM superfamily 97 256 1.3E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 SMART SM00729 90 299 1.1E-13 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 Hamap MF_00206 Lipoyl synthase [lipA]. 1 327 153.716 T 29-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS09850 1f8279358402aabda6a7f9ef61c39fc8 327 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 43 79 1.9E-7 T 29-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:1.10.10.10 1 87 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:3.40.190.10 181 261 3.6E-12 T 29-03-2018 AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF53850 92 293 3.98E-27 T 29-03-2018 AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 SUPERFAMILY SSF46785 5 87 1.03E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Pfam PF03466 LysR substrate binding domain 92 290 1.1E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS05405 4c41bf983e8dc9617c02dfbcf9f0b87d 309 Gene3D G3DSA:3.40.190.10 94 180 3.2E-8 T 29-03-2018 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Gene3D G3DSA:1.10.8.60 796 849 4.4E-4 T 29-03-2018 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 SUPERFAMILY SSF81923 10 131 5.23E-19 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 10 849 0.0 T 29-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 8.4E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 661 679 8.4E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 690 708 8.4E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 723 737 8.4E-31 T 29-03-2018 IPR001270 ClpA/B family GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 SMART SM00382 612 754 5.1E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 SMART SM00382 215 360 1.0E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 SUPERFAMILY SSF52540 561 838 1.01E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Gene3D G3DSA:3.40.50.300 564 795 1.0E-32 T 29-03-2018 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 332 2.7E-10 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Gene3D G3DSA:1.10.1780.10 2 157 1.3E-23 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 71 2.2E-10 T 29-03-2018 IPR004176 Clp, N-terminal GO:0019538 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 848 1.7E-5 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Gene3D G3DSA:1.10.8.60 361 562 1.9E-38 T 29-03-2018 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 311 323 - T 29-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Pfam PF07724 AAA domain (Cdc48 subfamily) 611 775 4.2E-36 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 Gene3D G3DSA:3.40.50.300 175 359 7.0E-21 T 29-03-2018 AM474_RS31445 abed1aaad0af891449fa30a99abdc202 849 SUPERFAMILY SSF52540 176 535 1.89E-71 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 Gene3D G3DSA:3.60.120.10 3 392 2.4E-80 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00097 Anthranilate synthase component II signature 511 522 3.6E-8 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00097 Anthranilate synthase component II signature 597 610 3.6E-8 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00097 Anthranilate synthase component II signature 437 451 3.6E-8 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 SUPERFAMILY SSF56322 66 390 6.67E-67 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 511 522 2.8E-9 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 478 487 2.8E-9 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00096 Glutamine amidotransferase superfamily signature 597 610 2.8E-9 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 Gene3D G3DSA:3.40.50.880 435 626 6.2E-31 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 SUPERFAMILY SSF52317 437 624 1.12E-22 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 475 489 5.7E-5 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 511 527 5.7E-5 T 29-03-2018 AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 Pfam PF00117 Glutamine amidotransferase class-I 439 618 1.6E-25 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS28815 8ebab424018b512b57d9bc6db4d02672 627 Pfam PF00425 chorismate binding enzyme 122 381 4.1E-47 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS29190 f63e7f7cb7a1650b4aec577e6cb63a86 387 Pfam PF08495 FIST N domain 37 233 2.0E-33 T 29-03-2018 IPR013702 FIST domain, N-terminal AM474_RS29190 f63e7f7cb7a1650b4aec577e6cb63a86 387 SMART SM00897 34 235 1.4E-60 T 29-03-2018 IPR013702 FIST domain, N-terminal AM474_RS29190 f63e7f7cb7a1650b4aec577e6cb63a86 387 Pfam PF10442 FIST C domain 238 364 7.3E-12 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS29190 f63e7f7cb7a1650b4aec577e6cb63a86 387 SMART SM01204 236 366 3.6E-29 T 29-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 Gene3D G3DSA:1.10.150.120 84 177 1.2E-21 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 SUPERFAMILY SSF47741 99 174 2.62E-19 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 39 80 1.9E-5 T 29-03-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 Pfam PF01799 [2Fe-2S] binding domain 82 166 1.2E-20 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 SUPERFAMILY SSF54292 4 87 2.1E-17 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS20225 fbe594656f6800caa8517cbdbce82aaa 179 Gene3D G3DSA:3.10.20.30 1 83 3.8E-20 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00387 315 419 5.4E-21 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF55874 266 417 2.23E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 1.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 1.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.3E-8 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 269 5.7E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 417 1.6E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 SUPERFAMILY SSF47384 205 271 5.69E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:3.30.565.10 308 420 5.0E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 SMART SM00388 207 273 1.6E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS20915 da4ffc84eaa02c19c608add6b5b30eb6 422 Gene3D G3DSA:1.10.287.130 191 268 1.0E-6 T 29-03-2018 AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 Pfam PF13242 HAD-hyrolase-like 210 270 6.8E-8 T 29-03-2018 AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 Gene3D G3DSA:3.40.50.1000 25 292 1.3E-23 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 Pfam PF13344 Haloacid dehalogenase-like hydrolase 34 120 1.2E-9 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 34 259 4.3E-56 T 29-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 24 259 5.2E-108 T 29-03-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 AM474_RS09145 5d15ce2258f1627999ffe9743688245a 299 SUPERFAMILY SSF56784 30 268 7.79E-36 T 29-03-2018 IPR023214 HAD-like domain AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Gene3D G3DSA:3.30.70.1450 322 398 2.4E-16 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 SUPERFAMILY SSF116726 232 307 8.89E-10 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 29-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF03600 Citrate transporter 17 555 4.2E-58 T 29-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Gene3D G3DSA:3.30.70.1450 217 304 1.8E-13 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 SUPERFAMILY SSF116726 317 393 2.75E-17 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF02080 TrkA-C domain 232 300 2.3E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS08900 e2cc4b703f1a3ec447c8127efcf7fd5f 610 Pfam PF02080 TrkA-C domain 326 392 4.0E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14785 d99a98c6b44b38224a6d65f53a9a1ae1 105 SUPERFAMILY SSF48452 10 84 1.14E-11 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS14785 d99a98c6b44b38224a6d65f53a9a1ae1 105 Pfam PF13428 Tetratricopeptide repeat 21 59 3.0E-5 T 29-03-2018 AM474_RS14785 d99a98c6b44b38224a6d65f53a9a1ae1 105 Gene3D G3DSA:1.25.40.10 1 105 1.9E-19 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS14785 d99a98c6b44b38224a6d65f53a9a1ae1 105 SMART SM00028 51 84 17.0 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS14785 d99a98c6b44b38224a6d65f53a9a1ae1 105 SMART SM00028 17 50 0.55 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 Gene3D G3DSA:2.40.50.100 51 122 5.5E-13 T 29-03-2018 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 12 431 5.2E-122 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 317 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 376 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 353 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 396 411 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 411 431 7.0E-63 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 Gene3D G3DSA:1.20.1600.10 123 391 3.7E-15 T 29-03-2018 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 Pfam PF00529 HlyD membrane-fusion protein of T1SS 23 386 4.4E-20 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 SUPERFAMILY SSF111369 54 112 3.14E-6 T 29-03-2018 AM474_RS25280 a5cfcdf1eafb8fb67dc091602b3d66aa 432 ProSitePatterns PS00543 HlyD family secretion proteins signature. 396 418 - T 29-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 245 260 - T 29-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 SUPERFAMILY SSF52540 158 397 2.59E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Pfam PF02954 Bacterial regulatory protein, Fis family 426 463 2.9E-12 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Gene3D G3DSA:1.10.10.60 426 473 1.5E-14 T 29-03-2018 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.4E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 1.4E-8 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Gene3D G3DSA:3.40.50.300 153 331 1.0E-25 T 29-03-2018 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Gene3D G3DSA:3.30.450.20 5 118 1.2E-12 T 29-03-2018 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 SMART SM00091 19 86 0.0015 T 29-03-2018 IPR000014 PAS domain AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Pfam PF08448 PAS fold 26 117 6.1E-8 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Pfam PF00158 Sigma-54 interaction domain 159 326 2.6E-63 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 Gene3D G3DSA:1.10.8.60 332 425 8.9E-18 T 29-03-2018 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 SUPERFAMILY SSF55785 11 116 6.28E-13 T 29-03-2018 IPR000014 PAS domain AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 SUPERFAMILY SSF46689 369 468 1.9E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 SMART SM00382 178 323 9.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS29340 e9bd00c4b2dcf5367631621a7bae272d 481 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 SUPERFAMILY SSF56037 337 434 1.15E-18 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 Pfam PF11734 TilS substrate C-terminal domain 364 432 1.4E-16 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 SMART SM00977 364 432 2.1E-19 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 Gene3D G3DSA:3.40.50.620 17 227 2.1E-42 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 409 2.1E-14 T 29-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 Pfam PF01171 PP-loop family 23 199 3.7E-59 T 29-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 396 23.151 T 29-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 Pfam PF09179 TilS substrate binding domain 260 323 2.6E-13 T 29-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 SUPERFAMILY SSF82829 248 328 3.4E-17 T 29-03-2018 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 24 203 3.2E-52 T 29-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM474_RS07550 da32e1ebc5c376e215d76e91a5704d16 442 SUPERFAMILY SSF52402 17 232 5.73E-62 T 29-03-2018 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 Gene3D G3DSA:2.40.160.50 376 728 2.3E-30 T 29-03-2018 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 SUPERFAMILY SSF52151 18 302 5.23E-61 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 Gene3D G3DSA:3.40.1090.10 14 375 4.1E-50 T 29-03-2018 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 Pfam PF01103 Surface antigen 449 728 1.9E-9 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 Pfam PF01734 Patatin-like phospholipase 27 219 7.8E-28 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM474_RS06030 d9363434bd5e3cdf1a6d9f456e62428b 728 Pfam PF07244 Surface antigen variable number repeat 333 394 1.6E-5 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 SUPERFAMILY SSF53720 16 494 3.4E-163 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 Gene3D G3DSA:3.40.605.10 10 283 5.7E-99 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 Gene3D G3DSA:3.40.309.10 284 475 1.4E-66 T 29-03-2018 AM474_RS10820 808213d99394bfa36a67f5c2a12157e1 496 Pfam PF00171 Aldehyde dehydrogenase family 32 491 3.6E-166 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS12440 37b3e55b9ca67083e7f0ae764d56cacf 443 Gene3D G3DSA:2.40.50.140 368 441 1.8E-16 T 29-03-2018 AM474_RS12440 37b3e55b9ca67083e7f0ae764d56cacf 443 Gene3D G3DSA:3.90.226.10 25 199 1.6E-24 T 29-03-2018 AM474_RS12440 37b3e55b9ca67083e7f0ae764d56cacf 443 SUPERFAMILY SSF52096 25 194 1.49E-26 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS12440 37b3e55b9ca67083e7f0ae764d56cacf 443 SUPERFAMILY SSF141322 370 436 9.29E-8 T 29-03-2018 AM474_RS12440 37b3e55b9ca67083e7f0ae764d56cacf 443 Pfam PF01957 NfeD-like C-terminal, partner-binding 298 436 3.8E-32 T 29-03-2018 IPR002810 NfeD-like, C-terminal domain AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 29-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 Gene3D G3DSA:2.30.110.10 12 215 4.3E-78 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 122 3.5E-29 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 215 2.2E-19 T 29-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 4.1E-90 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 40.397 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 SUPERFAMILY SSF50475 8 215 2.43E-71 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS24105 491e8bb5687f37d3a05d4ee99b70d42b 215 PIRSF PIRSF000190 1 215 5.8E-83 T 29-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS19750 6e76954f8f69b128c04643028582135b 115 PIRSF PIRSF029688 1 115 4.9E-72 T 29-03-2018 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 AM474_RS19750 6e76954f8f69b128c04643028582135b 115 Gene3D G3DSA:2.160.10.20 30 102 1.2E-13 T 29-03-2018 AM474_RS19750 6e76954f8f69b128c04643028582135b 115 Pfam PF00805 Pentapeptide repeats (8 copies) 54 90 7.2E-10 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS19750 6e76954f8f69b128c04643028582135b 115 SUPERFAMILY SSF141571 34 91 6.93E-12 T 29-03-2018 AM474_RS08185 c7a8aae30395feaa08299c7b7c94d9ad 92 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 76 1.9E-9 T 29-03-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 AM474_RS22830 eb9903c94b36b1c75648455a9ba61d98 304 Pfam PF01553 Acyltransferase 76 221 3.1E-14 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS22830 eb9903c94b36b1c75648455a9ba61d98 304 SMART SM00563 89 231 1.2E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS22830 eb9903c94b36b1c75648455a9ba61d98 304 SUPERFAMILY SSF69593 58 288 3.79E-36 T 29-03-2018 AM474_RS22830 eb9903c94b36b1c75648455a9ba61d98 304 Gene3D G3DSA:3.40.1130.10 41 284 1.6E-22 T 29-03-2018 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 SUPERFAMILY SSF53328 5 210 4.32E-67 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 SUPERFAMILY SSF50486 208 307 4.51E-31 T 29-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 29-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 Gene3D G3DSA:3.10.25.10 210 311 1.1E-29 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 Pfam PF00551 Formyl transferase 6 184 4.8E-47 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.077 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 4.8E-26 T 29-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 Gene3D G3DSA:3.40.50.170 2 209 4.0E-70 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS14770 2ed2cf886f81b539ded49701099a4eb5 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 306 5.7E-95 T 29-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM474_RS32055 7b0f8bd1111449804c800fdcbf0200f1 291 Gene3D G3DSA:1.10.760.10 142 249 1.9E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32055 7b0f8bd1111449804c800fdcbf0200f1 291 SUPERFAMILY SSF46626 157 276 3.53E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32055 7b0f8bd1111449804c800fdcbf0200f1 291 Gene3D G3DSA:1.10.760.10 44 141 7.4E-21 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32055 7b0f8bd1111449804c800fdcbf0200f1 291 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 167 246 5.8E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS32055 7b0f8bd1111449804c800fdcbf0200f1 291 SUPERFAMILY SSF46626 39 146 1.79E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS11380 4edaac4f027dfded1d5b16dcaf0d68d1 140 Pfam PF02566 OsmC-like protein 34 132 2.8E-19 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS11380 4edaac4f027dfded1d5b16dcaf0d68d1 140 SUPERFAMILY SSF82784 1 137 1.83E-41 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS11380 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:2.20.25.10 1 21 7.8E-15 T 29-03-2018 AM474_RS11380 4edaac4f027dfded1d5b16dcaf0d68d1 140 Gene3D G3DSA:3.30.300.20 22 140 8.4E-32 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF55785 204 299 2.79E-12 T 29-03-2018 IPR000014 PAS domain AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.30.450.20 194 312 1.4E-18 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 547 556 - T 29-03-2018 IPR025944 Sigma-54 interaction domain, conserved site AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 615 632 1.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 632 650 1.8E-5 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF00158 Sigma-54 interaction domain 333 499 2.4E-66 T 29-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF159800 22 195 1.57E-40 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:1.10.10.60 584 650 2.8E-11 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SMART SM00091 205 271 6.3E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SMART SM00382 352 497 1.2E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF08448 PAS fold 211 308 1.2E-7 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.2300 20 98 3.2E-12 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF52540 333 564 5.83E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 356 369 - T 29-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF06506 Propionate catabolism activator 37 199 2.6E-41 T 29-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:1.10.8.60 515 583 7.7E-15 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.300 313 514 2.6E-35 T 29-03-2018 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 SUPERFAMILY SSF46689 547 647 3.26E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 204 313 2.8E-6 T 29-03-2018 IPR000014 PAS domain AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Pfam PF02954 Bacterial regulatory protein, Fis family 615 647 6.0E-11 T 29-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM474_RS30430 a8210035729457cf18af5c0cb347bd0c 650 Gene3D G3DSA:3.40.50.10660 99 176 2.5E-19 T 29-03-2018 AM474_RS15240 363cf9e9e8db0b7bd8c39d5bff3350d4 262 SUPERFAMILY SSF81345 3 253 7.72E-40 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS15240 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Gene3D G3DSA:1.10.3470.10 1 262 5.4E-28 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS15240 363cf9e9e8db0b7bd8c39d5bff3350d4 262 Pfam PF00950 ABC 3 transport family 2 256 2.3E-78 T 29-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 Gene3D G3DSA:1.20.1050.10 95 145 2.5E-16 T 29-03-2018 AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 Gene3D G3DSA:1.20.1050.10 146 201 1.0E-15 T 29-03-2018 AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 2.0E-13 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 Gene3D G3DSA:3.40.30.10 1 94 9.2E-26 T 29-03-2018 AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 SUPERFAMILY SSF52833 1 84 3.77E-21 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 SUPERFAMILY SSF47616 78 207 7.78E-39 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS24025 3ed7ace9c62c234d0d80b549f57e6ac8 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 131 197 6.7E-11 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS18830 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 65 97 6.6E-20 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM474_RS18830 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 23 55 1.1E-19 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM474_RS18830 da40b9755dcc6e15498110527127b2ac 138 Pfam PF07769 psiF repeat 105 137 7.8E-20 T 29-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat AM474_RS22200 118f3d07486bf3da190ecf2b82c1a104 221 Gene3D G3DSA:1.10.10.60 168 211 4.7E-4 T 29-03-2018 AM474_RS22200 118f3d07486bf3da190ecf2b82c1a104 221 Gene3D G3DSA:1.10.10.60 110 167 4.2E-6 T 29-03-2018 AM474_RS22200 118f3d07486bf3da190ecf2b82c1a104 221 Pfam PF12833 Helix-turn-helix domain 138 208 9.2E-12 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22200 118f3d07486bf3da190ecf2b82c1a104 221 SMART SM00342 132 214 3.0E-9 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SUPERFAMILY SSF47384 191 274 4.51E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 Gene3D G3DSA:1.10.287.130 198 269 4.4E-10 T 29-03-2018 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SMART SM00304 155 207 6.9E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 2.0E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SMART SM00388 208 273 2.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.0E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SUPERFAMILY SSF55874 263 424 5.89E-39 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 Gene3D G3DSA:3.30.565.10 277 428 2.4E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 Pfam PF00672 HAMP domain 161 203 3.2E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 424 1.1E-20 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SUPERFAMILY SSF158472 158 206 3.4E-6 T 29-03-2018 AM474_RS28260 011872603d598163bb8edc1209c6bb8f 428 SMART SM00387 318 428 2.3E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 306 316 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 SUPERFAMILY SSF52743 49 369 5.89E-60 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 122 132 - T 29-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 SUPERFAMILY SSF103515 681 995 6.41E-67 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 118 131 9.2E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 305 321 9.2E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 PRINTS PR00723 Subtilisin serine protease family (S8) signature 70 89 9.2E-17 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 SMART SM00869 719 985 1.9E-53 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 Gene3D G3DSA:3.40.50.200 39 371 6.6E-62 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 455 485 8.6E-11 T 29-03-2018 IPR013425 Autotransporter-associated beta strand repeat AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 Pfam PF12951 Passenger-associated-transport-repeat 456 485 5.8E-8 T 29-03-2018 IPR013425 Autotransporter-associated beta strand repeat AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 Pfam PF03797 Autotransporter beta-domain 723 975 7.2E-57 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 Gene3D G3DSA:2.40.128.130 672 995 6.0E-59 T 29-03-2018 AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 521 995 7.9E-50 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM474_RS07000 30c83230ea1e8447a34c347d60a5cb06 995 Pfam PF00082 Subtilase family 70 359 3.9E-38 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS05135 d62c6bdc6961cbeee6645913ffec0863 145 Gene3D G3DSA:3.90.79.10 8 142 2.0E-17 T 29-03-2018 AM474_RS05135 d62c6bdc6961cbeee6645913ffec0863 145 SUPERFAMILY SSF55811 3 142 2.84E-20 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS05135 d62c6bdc6961cbeee6645913ffec0863 145 Pfam PF00293 NUDIX domain 17 124 5.9E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS13665 edaa640062b6f1aa3f0372185af2d4b6 260 Gene3D G3DSA:3.40.225.10 25 253 5.3E-52 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS13665 edaa640062b6f1aa3f0372185af2d4b6 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 33 211 5.0E-38 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS13665 edaa640062b6f1aa3f0372185af2d4b6 260 SMART SM01007 33 211 2.8E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS13665 edaa640062b6f1aa3f0372185af2d4b6 260 SUPERFAMILY SSF53639 26 243 2.16E-66 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS05950 a02b0854c24c7028e5a5c86858c0339a 291 SUPERFAMILY SSF55920 231 268 2.49E-21 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS05950 a02b0854c24c7028e5a5c86858c0339a 291 SUPERFAMILY SSF55920 7 204 2.49E-21 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS05950 a02b0854c24c7028e5a5c86858c0339a 291 Pfam PF00557 Metallopeptidase family M24 15 262 5.2E-24 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS05950 a02b0854c24c7028e5a5c86858c0339a 291 Gene3D G3DSA:3.90.230.10 7 278 5.4E-26 T 29-03-2018 AM474_RS17030 133581eeda2ad8db7283b8c6cdae5eb3 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 295 1.4E-115 T 29-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM474_RS17030 133581eeda2ad8db7283b8c6cdae5eb3 302 Gene3D G3DSA:3.90.25.10 202 276 5.8E-23 T 29-03-2018 AM474_RS17030 133581eeda2ad8db7283b8c6cdae5eb3 302 Gene3D G3DSA:3.40.50.720 2 201 2.8E-27 T 29-03-2018 AM474_RS17030 133581eeda2ad8db7283b8c6cdae5eb3 302 SUPERFAMILY SSF51735 1 296 2.47E-96 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS17030 133581eeda2ad8db7283b8c6cdae5eb3 302 Pfam PF04321 RmlD substrate binding domain 3 296 1.5E-111 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM474_RS23490 fe3f698c2e28c636ed845446adc754a8 154 Gene3D G3DSA:3.40.30.10 23 152 7.6E-27 T 29-03-2018 AM474_RS23490 fe3f698c2e28c636ed845446adc754a8 154 Pfam PF00578 AhpC/TSA family 26 132 1.1E-18 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS23490 fe3f698c2e28c636ed845446adc754a8 154 SUPERFAMILY SSF52833 6 150 6.73E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS23490 fe3f698c2e28c636ed845446adc754a8 154 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS14380 a0c8fc5bd00646490e62458c1fb6d04d 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 4.5E-58 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS14380 a0c8fc5bd00646490e62458c1fb6d04d 172 PIRSF PIRSF028301 3 172 9.4E-59 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS14380 a0c8fc5bd00646490e62458c1fb6d04d 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 163 4.4E-56 T 29-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 AM474_RS31335 b76f3ccd5610be1636c55b188bbb7da3 264 Gene3D G3DSA:3.40.190.10 114 211 8.8E-34 T 29-03-2018 AM474_RS31335 b76f3ccd5610be1636c55b188bbb7da3 264 Gene3D G3DSA:3.40.190.10 23 113 8.4E-14 T 29-03-2018 AM474_RS31335 b76f3ccd5610be1636c55b188bbb7da3 264 Pfam PF03180 NLPA lipoprotein 26 263 8.9E-75 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS31335 b76f3ccd5610be1636c55b188bbb7da3 264 SUPERFAMILY SSF53850 26 263 8.59E-65 T 29-03-2018 AM474_RS00205 5f32b09bce00c00ed538df8d5006969d 288 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 25 288 40.411 T 29-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM474_RS00205 5f32b09bce00c00ed538df8d5006969d 288 Pfam PF03301 Tryptophan 2,3-dioxygenase 21 207 1.0E-41 T 29-03-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AM474_RS00205 5f32b09bce00c00ed538df8d5006969d 288 SUPERFAMILY SSF140959 31 287 3.14E-100 T 29-03-2018 AM474_RS00205 5f32b09bce00c00ed538df8d5006969d 288 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 25 288 1.6E-128 T 29-03-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 AM474_RS19015 492ba99a41aeba55b31edb74ecec3e92 123 Gene3D G3DSA:3.30.780.10 37 121 1.4E-16 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM474_RS19015 492ba99a41aeba55b31edb74ecec3e92 123 SUPERFAMILY SSF55159 13 120 2.88E-28 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM474_RS19015 492ba99a41aeba55b31edb74ecec3e92 123 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 14 123 1.1E-37 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM474_RS19015 492ba99a41aeba55b31edb74ecec3e92 123 Pfam PF01253 Translation initiation factor SUI1 49 117 2.7E-16 T 29-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 AM474_RS19015 492ba99a41aeba55b31edb74ecec3e92 123 PIRSF PIRSF037511 1 123 1.4E-44 T 29-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 AM474_RS06115 cb58e30f8ad83e2542c1bdc0272fb1df 434 Gene3D G3DSA:1.20.1250.20 191 386 3.3E-25 T 29-03-2018 AM474_RS06115 cb58e30f8ad83e2542c1bdc0272fb1df 434 Gene3D G3DSA:1.20.1250.20 6 189 7.7E-15 T 29-03-2018 AM474_RS06115 cb58e30f8ad83e2542c1bdc0272fb1df 434 Pfam PF07690 Major Facilitator Superfamily 206 377 9.0E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS06115 cb58e30f8ad83e2542c1bdc0272fb1df 434 SUPERFAMILY SSF103473 8 374 3.4E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 210 333 5.3E-16 T 29-03-2018 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 SUPERFAMILY SSF53850 29 366 9.32E-90 T 29-03-2018 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 216 235 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 311 337 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 266 285 1.2E-51 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 Gene3D G3DSA:3.40.190.10 20 209 7.5E-27 T 29-03-2018 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 Pfam PF13416 Bacterial extracellular solute-binding protein 45 319 1.8E-26 T 29-03-2018 AM474_RS00795 8058aa8cd668ec5777dab32fb16018b6 367 PIRSF PIRSF019574 1 367 2.7E-117 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 Gene3D G3DSA:3.40.50.300 1 239 5.1E-68 T 29-03-2018 AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 SMART SM00382 26 213 1.0E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 PIRSF PIRSF039085 1 240 4.1E-103 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 Pfam PF00005 ABC transporter 18 165 7.8E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS25335 fe851de032b31d8595d74e17d44d10d3 240 SUPERFAMILY SSF52540 1 234 9.13E-75 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21180 025ae64b9e8fdbb8e0b897dbbb8f608a 148 Pfam PF06295 Protein of unknown function (DUF1043) 14 131 2.4E-20 T 29-03-2018 IPR009386 Protein of unknown function DUF1043 AM474_RS18295 e7593b639b4c4c0066f16f43544ed525 393 Pfam PF00155 Aminotransferase class I and II 33 380 7.5E-70 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS18295 e7593b639b4c4c0066f16f43544ed525 393 Gene3D G3DSA:3.40.640.10 55 272 1.8E-54 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS18295 e7593b639b4c4c0066f16f43544ed525 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM474_RS18295 e7593b639b4c4c0066f16f43544ed525 393 Gene3D G3DSA:3.90.1150.10 273 390 2.2E-29 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS18295 e7593b639b4c4c0066f16f43544ed525 393 SUPERFAMILY SSF53383 15 383 8.78E-110 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 77 2.4E-31 T 29-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF53697 93 273 3.27E-39 T 29-03-2018 AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:3.40.50.10490 93 273 2.1E-37 T 29-03-2018 AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 Gene3D G3DSA:1.10.10.10 1 92 5.9E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 SUPERFAMILY SSF46689 1 78 2.51E-22 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05155 f99f4195d0a1b90054d55a1a97105cde 285 Pfam PF01380 SIS domain 125 253 2.5E-21 T 29-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 316 3.8E-26 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 8.5E-19 T 29-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 Gene3D G3DSA:3.40.50.300 1 322 5.9E-83 T 29-03-2018 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 Pfam PF00005 ABC transporter 30 182 1.6E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 SUPERFAMILY SSF52540 5 253 4.71E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20850 6260528cafee6c152dc5773d9877034e 323 SMART SM00382 39 231 7.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 SMART SM00342 213 296 3.5E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 Gene3D G3DSA:1.10.10.60 252 301 2.4E-10 T 29-03-2018 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 SUPERFAMILY SSF46689 249 299 1.3E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 9.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 9.6E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 Pfam PF12833 Helix-turn-helix domain 219 298 2.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00550 5bab876a714a0a100c9d0852fde2e5d4 301 Gene3D G3DSA:1.10.10.60 193 251 4.1E-8 T 29-03-2018 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 Gene3D G3DSA:3.40.1370.10 140 198 1.5E-10 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 Gene3D G3DSA:3.40.1370.10 1 139 1.1E-47 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 SUPERFAMILY SSF52166 6 199 1.44E-71 T 29-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 34.093 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 1.1E-63 T 29-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM474_RS11165 f04d50fc81601fa1adb5c543ea51b6a5 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 197 8.3E-74 T 29-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS27210 82451d9b9cfbce02c67044fbd97e4f87 146 Pfam PF01638 HxlR-like helix-turn-helix 20 104 2.8E-19 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AM474_RS27210 82451d9b9cfbce02c67044fbd97e4f87 146 Gene3D G3DSA:1.10.10.10 2 146 7.0E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27210 82451d9b9cfbce02c67044fbd97e4f87 146 SUPERFAMILY SSF46785 6 143 9.66E-39 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29615 b55c44b6a34889339452c378fdd986b5 338 SUPERFAMILY SSF161098 135 321 1.44E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS29615 b55c44b6a34889339452c378fdd986b5 338 Gene3D G3DSA:1.10.3720.10 11 328 5.0E-41 T 29-03-2018 AM474_RS29615 b55c44b6a34889339452c378fdd986b5 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 337 2.8E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 Pfam PF03222 Tryptophan/tyrosine permease family 23 371 5.2E-35 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 341 360 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 284 303 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 97 117 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 320 338 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 25 48 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS28890 5b7a63d4ecc007ac49396e1fd9355b29 410 PRINTS PR00166 Aromatic amino acid permease signature 52 71 1.4E-13 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 384 4.9E-17 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 SUPERFAMILY SSF47203 241 386 2.09E-15 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 PIRSF PIRSF016578 144 394 1.4E-23 T 29-03-2018 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 PIRSF PIRSF016578 5 93 1.1E-10 T 29-03-2018 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 103 4.9E-6 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 221 1.0E-8 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:1.20.140.10 232 410 2.6E-21 T 29-03-2018 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 SUPERFAMILY SSF56645 28 230 6.81E-44 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:1.10.540.10 12 131 4.2E-14 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31230 36fd33a7aa49885a170827aeef7215a8 419 Gene3D G3DSA:2.40.110.10 132 231 2.6E-18 T 29-03-2018 AM474_RS06075 7a28c329edb76ede37550490455628e2 101 Pfam PF13466 STAS domain 16 94 2.3E-14 T 29-03-2018 IPR002645 STAS domain AM474_RS06075 7a28c329edb76ede37550490455628e2 101 Gene3D G3DSA:3.30.750.24 1 101 3.2E-17 T 29-03-2018 IPR002645 STAS domain AM474_RS06075 7a28c329edb76ede37550490455628e2 101 SUPERFAMILY SSF52091 10 100 1.08E-21 T 29-03-2018 IPR002645 STAS domain AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 SUPERFAMILY SSF55931 119 451 4.51E-104 T 29-03-2018 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 SMART SM01230 117 372 1.3E-97 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 SUPERFAMILY SSF54368 9 112 7.59E-7 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 Gene3D G3DSA:3.10.20.70 5 115 7.5E-12 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 253 268 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 Pfam PF00120 Glutamine synthetase, catalytic domain 118 450 4.2E-107 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS26990 f899342bdbbf6883ad825e2ab8344d32 454 Gene3D G3DSA:3.30.590.10 116 454 1.7E-98 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS10750 021249e0641c4a5e5e258f4ef62110e9 93 Gene3D G3DSA:3.10.50.40 1 93 3.0E-30 T 29-03-2018 AM474_RS10750 021249e0641c4a5e5e258f4ef62110e9 93 Pfam PF13616 PPIC-type PPIASE domain 8 91 5.6E-21 T 29-03-2018 AM474_RS10750 021249e0641c4a5e5e258f4ef62110e9 93 SUPERFAMILY SSF54534 5 92 5.43E-28 T 29-03-2018 AM474_RS10750 021249e0641c4a5e5e258f4ef62110e9 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Gene3D G3DSA:1.10.10.60 404 449 8.9E-14 T 29-03-2018 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Pfam PF00364 Biotin-requiring enzyme 540 605 2.4E-17 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Gene3D G3DSA:3.20.20.70 3 289 7.3E-76 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 SUPERFAMILY SSF51569 5 305 1.1E-89 T 29-03-2018 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 12 602 2.1E-256 T 29-03-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Pfam PF02436 Conserved carboxylase domain 297 488 7.0E-57 T 29-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 SUPERFAMILY SSF51230 532 605 2.36E-21 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Pfam PF00682 HMGL-like 12 273 4.2E-50 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 Gene3D G3DSA:2.40.50.100 529 607 1.7E-19 T 29-03-2018 AM474_RS15590 94ce16b9d99901013738de67cc4e0447 607 SUPERFAMILY SSF89000 302 452 1.61E-51 T 29-03-2018 AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 Pfam PF02780 Transketolase, C-terminal domain 205 322 1.7E-35 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 Gene3D G3DSA:3.40.50.920 203 331 1.1E-33 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 SMART SM00861 11 186 5.7E-59 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 Gene3D G3DSA:3.40.50.970 7 202 7.2E-60 T 29-03-2018 AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 Pfam PF02779 Transketolase, pyrimidine binding domain 12 186 6.7E-48 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 SUPERFAMILY SSF52922 197 331 1.83E-37 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS06480 1afd235ec6eb831fb4f52992e7200a34 333 SUPERFAMILY SSF52518 11 195 1.07E-61 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.40.50.720 1 136 6.1E-44 T 29-03-2018 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.40.50.720 137 295 8.6E-37 T 29-03-2018 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 Gene3D G3DSA:3.30.70.260 328 408 6.3E-14 T 29-03-2018 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 1.9E-47 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.5E-37 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF55021 334 408 2.75E-16 T 29-03-2018 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF51735 108 295 3.26E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 SUPERFAMILY SSF52283 7 136 3.4E-51 T 29-03-2018 AM474_RS13155 18f3e354539b232c0865a01f8293761d 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 10 256 1.2E-81 T 29-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 Gene3D G3DSA:3.40.190.10 143 263 7.7E-19 T 29-03-2018 AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 Gene3D G3DSA:3.40.190.10 20 142 4.5E-36 T 29-03-2018 AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 SMART SM00062 30 259 9.9E-74 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 SUPERFAMILY SSF53850 13 260 4.21E-66 T 29-03-2018 AM474_RS09050 f2cc1f1fde9468a35b85bbcb1a245031 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 1.6E-62 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF55874 281 439 2.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF158472 172 225 3.14E-7 T 29-03-2018 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 Gene3D G3DSA:1.10.287.130 217 287 6.6E-11 T 29-03-2018 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SUPERFAMILY SSF47384 210 290 3.14E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 290 1.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 440 3.6E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00388 227 291 3.8E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 6.9E-12 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 Gene3D G3DSA:3.30.565.10 295 445 8.1E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00304 171 226 6.1E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 Pfam PF00672 HAMP domain 172 222 3.2E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS05280 d5eb7405c45952f862eb6454c041fcb4 445 SMART SM00387 332 441 1.2E-28 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17155 502654a1531a733cfcde290c6b20c601 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 3.3E-77 T 29-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM474_RS17155 502654a1531a733cfcde290c6b20c601 245 SUPERFAMILY SSF51366 1 239 2.28E-75 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS17155 502654a1531a733cfcde290c6b20c601 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.569 T 29-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AM474_RS17155 502654a1531a733cfcde290c6b20c601 245 Gene3D G3DSA:3.20.20.70 1 243 3.0E-60 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS17155 502654a1531a733cfcde290c6b20c601 245 Pfam PF00977 Histidine biosynthesis protein 3 231 1.3E-77 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM474_RS07110 34137a41ac6db5d66a56f105bc1584e0 549 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 547 41.448 T 29-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 AM474_RS07110 34137a41ac6db5d66a56f105bc1584e0 549 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 11 236 2.9E-30 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF51306 82 203 6.8E-36 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 1.9E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 1.9E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 1.9E-12 T 29-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF01726 LexA DNA binding domain 1 65 1.9E-31 T 29-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 6.5E-75 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.413 T 29-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:2.10.109.10 86 204 5.7E-25 T 29-03-2018 AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 Pfam PF00717 Peptidase S24-like 120 186 1.0E-14 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 SUPERFAMILY SSF46785 3 70 1.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04245 f2ebaeb68fa7576cf01473b7f957f178 204 Gene3D G3DSA:1.10.10.10 1 69 4.2E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24310 7b5b0bad8c7ebd6e785ba670aafaacc7 433 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 432 5.2E-114 T 29-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 AM474_RS24310 7b5b0bad8c7ebd6e785ba670aafaacc7 433 SUPERFAMILY SSF64518 1 433 5.49E-82 T 29-03-2018 AM474_RS24310 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00700 Bacterial flagellin C-terminal helical region 352 432 4.5E-7 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM474_RS24310 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Gene3D G3DSA:1.20.1330.10 38 407 1.0E-32 T 29-03-2018 AM474_RS24310 7b5b0bad8c7ebd6e785ba670aafaacc7 433 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.9E-21 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-16 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-16 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-16 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 Gene3D G3DSA:4.10.520.10 1 90 2.9E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 SMART SM00411 1 90 3.5E-38 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS16070 6ef67f0f273137b64cc28549bf24951c 90 SUPERFAMILY SSF47729 1 90 2.65E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 3.7E-12 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 3.2E-16 T 29-03-2018 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF54909 63 136 8.04E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:3.30.70.920 51 141 5.7E-18 T 29-03-2018 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 Gene3D G3DSA:1.10.10.10 1 50 5.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 SUPERFAMILY SSF46785 1 60 3.38E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 SMART SM00344 1 107 1.7E-32 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 29-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.0E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.0E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS19305 7ced6e8c1996517e633dd182cd8b56a5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.0E-13 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 8 376 50.562 T 29-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 SUPERFAMILY SSF53474 13 375 9.76E-101 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 PIRSF PIRSF000443 2 379 2.3E-132 T 29-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 Gene3D G3DSA:3.40.50.1820 30 376 1.5E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 Pfam PF00561 alpha/beta hydrolase fold 51 360 1.3E-31 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12760 49d5076b27c73e65b1996471f8c543ca 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 370 1.1E-136 T 29-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 SUPERFAMILY SSF48008 87 217 1.7E-21 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 71 2.6E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 Gene3D G3DSA:1.20.120.530 83 221 7.2E-25 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 SUPERFAMILY SSF46785 16 83 2.38E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 Pfam PF07729 FCD domain 89 210 7.9E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 SMART SM00895 89 212 5.5E-16 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS14180 caf2a2610650c7ab29c4c6c6d898babe 244 Gene3D G3DSA:1.10.10.10 4 82 4.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03490 2d89d5fb2a45e614d790d7893cddf200 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 7 171 1.6E-29 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM474_RS03490 2d89d5fb2a45e614d790d7893cddf200 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 6 171 19.182 T 29-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 AM474_RS03490 2d89d5fb2a45e614d790d7893cddf200 182 SUPERFAMILY SSF55144 7 173 1.19E-40 T 29-03-2018 IPR009097 Cyclic phosphodiesterase AM474_RS03490 2d89d5fb2a45e614d790d7893cddf200 182 Pfam PF13563 2'-5' RNA ligase superfamily 15 155 3.2E-12 T 29-03-2018 AM474_RS03490 2d89d5fb2a45e614d790d7893cddf200 182 Gene3D G3DSA:3.90.1140.10 2 181 3.2E-33 T 29-03-2018 AM474_RS07985 7610f13e61898731755b6f354ea78ac4 571 Pfam PF01368 DHH family 69 197 5.6E-8 T 29-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS07985 7610f13e61898731755b6f354ea78ac4 571 SUPERFAMILY SSF64182 44 459 1.29E-118 T 29-03-2018 AM474_RS07985 7610f13e61898731755b6f354ea78ac4 571 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 566 6.8E-149 T 29-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM474_RS07985 7610f13e61898731755b6f354ea78ac4 571 Pfam PF02272 DHHA1 domain 318 445 4.6E-29 T 29-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM474_RS07985 7610f13e61898731755b6f354ea78ac4 571 Gene3D G3DSA:3.90.1640.10 48 238 6.3E-20 T 29-03-2018 AM474_RS25875 a0f810a4fc4cb768a78becca51f28c2d 297 SUPERFAMILY SSF103481 47 137 4.97E-7 T 29-03-2018 AM474_RS25875 a0f810a4fc4cb768a78becca51f28c2d 297 SUPERFAMILY SSF103481 185 282 1.2E-7 T 29-03-2018 AM474_RS25875 a0f810a4fc4cb768a78becca51f28c2d 297 Pfam PF00892 EamA-like transporter family 150 280 1.5E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS05290 1910bd5bcac7aa197c5721a65e08696c 186 PIRSF PIRSF000232 1 186 2.2E-66 T 29-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AM474_RS05290 1910bd5bcac7aa197c5721a65e08696c 186 SUPERFAMILY SSF55469 1 182 6.67E-39 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS05290 1910bd5bcac7aa197c5721a65e08696c 186 Gene3D G3DSA:3.40.109.10 1 185 9.2E-33 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS05290 1910bd5bcac7aa197c5721a65e08696c 186 Pfam PF00881 Nitroreductase family 9 163 9.3E-24 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS15350 bffef71379ca405015767e30450b610e 444 Pfam PF00375 Sodium:dicarboxylate symporter family 8 410 3.0E-119 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 Gene3D G3DSA:1.10.3860.10 2 417 6.0E-127 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 427 42.692 T 29-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 SUPERFAMILY SSF118215 8 411 6.8E-125 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 202 221 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 4.2E-53 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS15350 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM474_RS15350 bffef71379ca405015767e30450b610e 444 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM474_RS03750 09017c7255771d298e1d3486a99ff064 323 Gene3D G3DSA:3.40.50.1980 19 157 2.3E-21 T 29-03-2018 AM474_RS03750 09017c7255771d298e1d3486a99ff064 323 Pfam PF01497 Periplasmic binding protein 54 295 1.1E-23 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM474_RS03750 09017c7255771d298e1d3486a99ff064 323 SUPERFAMILY SSF53807 43 318 1.61E-45 T 29-03-2018 AM474_RS03750 09017c7255771d298e1d3486a99ff064 323 Gene3D G3DSA:3.40.50.1980 158 322 2.3E-40 T 29-03-2018 AM474_RS10650 1e5dcd34b0bd57efcc78492d0f9928a4 435 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 20 428 8.7E-110 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM474_RS10650 1e5dcd34b0bd57efcc78492d0f9928a4 435 SUPERFAMILY SSF51679 4 433 3.27E-103 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS10650 1e5dcd34b0bd57efcc78492d0f9928a4 435 Gene3D G3DSA:3.20.20.30 3 435 1.0E-80 T 29-03-2018 AM474_RS10650 1e5dcd34b0bd57efcc78492d0f9928a4 435 PIRSF PIRSF000337 2 435 1.8E-150 T 29-03-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 AM474_RS10650 1e5dcd34b0bd57efcc78492d0f9928a4 435 Pfam PF00296 Luciferase-like monooxygenase 34 387 2.4E-51 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 Gene3D G3DSA:2.40.50.140 40 98 1.2E-18 T 29-03-2018 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 SUPERFAMILY SSF52540 113 334 3.09E-56 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 Gene3D G3DSA:1.10.40.50 275 338 3.1E-20 T 29-03-2018 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 Pfam PF03193 RsgA GTPase 100 273 8.5E-53 T 29-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 Gene3D G3DSA:3.40.50.300 110 273 1.2E-24 T 29-03-2018 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 78 330 1.3E-75 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 SUPERFAMILY SSF50249 45 103 6.17E-5 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS18420 86c9695ab4e5ad9f0406b6ebe6065f97 339 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 338 36.188 T 29-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 Pfam PF00266 Aminotransferase class-V 77 363 1.5E-15 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 PIRSF PIRSF038800 1 407 4.2E-140 T 29-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 35.078 T 29-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 TIGRFAM TIGR01814 kynureninase: kynureninase 8 399 1.1E-102 T 29-03-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 Gene3D G3DSA:3.90.1150.10 296 416 2.4E-25 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 SUPERFAMILY SSF53383 3 400 1.07E-90 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS29735 e60bf8c4ee3c4766e0e05f84df6f3f6a 416 Gene3D G3DSA:3.40.640.10 41 295 9.6E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS22595 f3793672f1ecf6806366408125a7852e 221 Gene3D G3DSA:3.40.50.150 1 213 1.8E-34 T 29-03-2018 AM474_RS22595 f3793672f1ecf6806366408125a7852e 221 Pfam PF13847 Methyltransferase domain 49 146 6.9E-13 T 29-03-2018 IPR025714 Methyltransferase domain AM474_RS22595 f3793672f1ecf6806366408125a7852e 221 SUPERFAMILY SSF53335 3 199 1.19E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 SUPERFAMILY SSF51905 363 648 3.5E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 Gene3D G3DSA:3.20.20.70 1 375 3.9E-96 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 Gene3D G3DSA:3.40.50.720 376 483 3.2E-19 T 29-03-2018 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 614 1.4E-10 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 487 1.8E-7 T 29-03-2018 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 406 1.8E-7 T 29-03-2018 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 Gene3D G3DSA:3.50.50.60 484 621 3.0E-12 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 339 5.6E-58 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS18240 a1024b52458ec591b2eda967db980a47 648 SUPERFAMILY SSF51395 2 368 1.29E-94 T 29-03-2018 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 1.6E-52 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 Gene3D G3DSA:3.30.70.20 106 172 4.6E-8 T 29-03-2018 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 Gene3D G3DSA:3.30.70.20 24 72 1.2E-6 T 29-03-2018 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 SUPERFAMILY SSF54862 35 162 5.02E-29 T 29-03-2018 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 Pfam PF12838 4Fe-4S dicluster domain 61 115 1.3E-11 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 Gene3D G3DSA:3.30.70.20 73 105 5.0E-14 T 29-03-2018 AM474_RS01065 171a805602766f6093b2ec8a71d30d6d 182 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 152 27.503 T 29-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS12585 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Gene3D G3DSA:2.40.128.110 24 191 4.3E-50 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS12585 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SUPERFAMILY SSF101874 22 191 2.88E-56 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS12585 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Hamap MF_00780 Protein YceI [yceI]. 2 191 45.339 T 29-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI AM474_RS12585 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 Pfam PF04264 YceI-like domain 26 186 1.9E-41 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS12585 ba5f1c4cd95dfa38fd693b5e7baa69c0 191 SMART SM00867 25 189 1.3E-71 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS22550 e49afe9b8769c44888a51bb66f2d324f 687 Gene3D G3DSA:2.170.130.10 32 160 3.4E-19 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS22550 e49afe9b8769c44888a51bb66f2d324f 687 Pfam PF00593 TonB dependent receptor 208 685 5.4E-43 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS22550 e49afe9b8769c44888a51bb66f2d324f 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 4.4E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS22550 e49afe9b8769c44888a51bb66f2d324f 687 SUPERFAMILY SSF56935 55 687 9.16E-95 T 29-03-2018 AM474_RS22550 e49afe9b8769c44888a51bb66f2d324f 687 Gene3D G3DSA:2.40.170.20 165 687 2.8E-57 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 PIRSF PIRSF002808 5 448 2.8E-174 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 Gene3D G3DSA:1.20.1250.20 240 447 1.8E-31 T 29-03-2018 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 Pfam PF07690 Major Facilitator Superfamily 34 400 3.9E-53 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 Gene3D G3DSA:1.20.1250.20 18 221 2.2E-35 T 29-03-2018 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 SUPERFAMILY SSF103473 10 439 5.23E-87 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 29-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.3E-154 T 29-03-2018 AM474_RS16650 bc769c30637454e3f6c860ee1a26c93c 449 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 435 2.2E-240 T 29-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 SUPERFAMILY SSF55347 135 300 1.5E-52 T 29-03-2018 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 SUPERFAMILY SSF51735 2 156 2.96E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Gene3D G3DSA:3.30.70.260 348 429 2.9E-21 T 29-03-2018 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Gene3D G3DSA:3.30.360.10 156 296 1.1E-53 T 29-03-2018 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Pfam PF01842 ACT domain 352 419 3.8E-16 T 29-03-2018 IPR002912 ACT domain AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Gene3D G3DSA:3.40.50.720 1 155 4.3E-31 T 29-03-2018 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 29-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 PIRSF PIRSF000098 1 433 2.2E-167 T 29-03-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 SUPERFAMILY SSF55021 350 420 2.41E-15 T 29-03-2018 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 2.1E-25 T 29-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AM474_RS08045 1a7050231628a4179d5c40bbcad417e6 434 Pfam PF00742 Homoserine dehydrogenase 135 313 9.5E-64 T 29-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AM474_RS09270 0b4c64efd0418f3b50a370a443eb948f 239 PIRSF PIRSF029636 10 239 5.1E-96 T 29-03-2018 IPR016929 Uncharacterised conserved protein UCP029636 AM474_RS09270 0b4c64efd0418f3b50a370a443eb948f 239 Pfam PF15579 Immunity protein 52 139 234 9.1E-26 T 29-03-2018 IPR028969 Immunity protein 52 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 25 490 4.0E-110 T 29-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Gene3D G3DSA:3.30.870.10 116 295 1.8E-32 T 29-03-2018 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 SUPERFAMILY SSF56024 117 319 9.42E-51 T 29-03-2018 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 SUPERFAMILY SSF56024 281 469 5.16E-47 T 29-03-2018 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 SMART SM00155 229 256 1.7E-4 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 SMART SM00155 403 430 3.1E-6 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Pfam PF13091 PLD-like domain 149 289 5.2E-7 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Pfam PF13091 PLD-like domain 331 456 7.8E-28 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Pfam PF13396 Phospholipase_D-nuclease N-terminal 30 71 7.1E-5 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Hamap MF_00190 Cardiolipin synthase A [clsA]. 13 490 45.894 T 29-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 AM474_RS15805 0c6030e9342e82ea418831b7a54ec75d 490 Gene3D G3DSA:3.30.870.10 328 482 1.8E-31 T 29-03-2018 AM474_RS27600 833459f8c99d94d310a001d96f197f8f 198 SUPERFAMILY SSF52499 2 191 6.02E-44 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS27600 833459f8c99d94d310a001d96f197f8f 198 Pfam PF00857 Isochorismatase family 23 193 3.3E-35 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS27600 833459f8c99d94d310a001d96f197f8f 198 Gene3D G3DSA:3.40.50.850 20 193 1.3E-40 T 29-03-2018 AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 5.5E-48 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 6.8E-31 T 29-03-2018 AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 SUPERFAMILY SSF56784 2 206 1.68E-28 T 29-03-2018 IPR023214 HAD-like domain AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.5E-28 T 29-03-2018 AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:1.20.1440.100 16 77 4.1E-22 T 29-03-2018 AM474_RS05555 066a6eb8f32d162abc3c16c42e7774c3 216 Gene3D G3DSA:3.40.50.1000 78 208 7.7E-10 T 29-03-2018 IPR023214 HAD-like domain AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 SUPERFAMILY SSF161111 9 209 9.29E-53 T 29-03-2018 AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 Pfam PF01545 Cation efflux family 17 208 2.2E-37 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 SUPERFAMILY SSF160240 212 289 8.5E-21 T 29-03-2018 AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 Gene3D G3DSA:1.20.1510.10 10 207 5.3E-38 T 29-03-2018 AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 290 1.9E-65 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 1.6E-22 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM474_RS09685 8bd22bdee383c835875eb18aa7eb4670 298 Gene3D G3DSA:3.30.70.1350 208 297 3.7E-22 T 29-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain AM474_RS08950 b46da14fa91599721d62097cdf8f752b 180 SUPERFAMILY SSF52499 2 178 2.88E-45 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS08950 b46da14fa91599721d62097cdf8f752b 180 Pfam PF00857 Isochorismatase family 8 156 1.1E-24 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS08950 b46da14fa91599721d62097cdf8f752b 180 Gene3D G3DSA:3.40.50.850 2 179 3.7E-35 T 29-03-2018 AM474_RS19365 64d0785a7c80488b736c0952be6a73d2 160 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 11 127 31.184 T 29-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS19365 64d0785a7c80488b736c0952be6a73d2 160 Pfam PF02675 S-adenosylmethionine decarboxylase 18 123 2.9E-34 T 29-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS19365 64d0785a7c80488b736c0952be6a73d2 160 SUPERFAMILY SSF56276 13 124 3.26E-38 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM474_RS19365 64d0785a7c80488b736c0952be6a73d2 160 Gene3D G3DSA:3.60.90.10 7 128 7.1E-38 T 29-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 AM474_RS19365 64d0785a7c80488b736c0952be6a73d2 160 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 13 123 4.0E-45 T 29-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Gene3D G3DSA:2.40.110.10 138 234 6.1E-17 T 29-03-2018 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 226 7.6E-10 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 20 411 1.6E-177 T 29-03-2018 IPR023922 Sulphate-starvation-induced SfnB AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 SUPERFAMILY SSF47203 249 409 1.34E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Gene3D G3DSA:1.10.540.10 8 135 4.1E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 252 386 2.2E-21 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 SUPERFAMILY SSF56645 33 234 1.3E-44 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 PIRSF PIRSF016578 19 402 1.5E-26 T 29-03-2018 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Gene3D G3DSA:1.20.140.10 235 410 3.0E-19 T 29-03-2018 AM474_RS31320 f5129982475a45e07f708c7831484f9d 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 132 3.8E-9 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 Gene3D G3DSA:3.40.30.10 1 84 4.6E-30 T 29-03-2018 AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 Pfam PF00462 Glutaredoxin 4 63 7.8E-22 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 29-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 46 59 1.2E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 PRINTS PR00160 Glutaredoxin signature 60 73 1.2E-15 T 29-03-2018 IPR014025 Glutaredoxin subgroup AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 2.0E-35 T 29-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AM474_RS17215 c4a55980bb84ae5ee46d0e5927b71929 84 SUPERFAMILY SSF52833 1 83 1.2E-29 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Pfam PF01568 Molydopterin dinucleotide binding domain 576 694 1.1E-25 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 58 2.6E-5 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 SUPERFAMILY SSF53706 6 621 2.75E-127 T 29-03-2018 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Gene3D G3DSA:3.40.50.740 380 436 7.1E-10 T 29-03-2018 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Gene3D G3DSA:2.40.40.20 518 702 5.7E-29 T 29-03-2018 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Gene3D G3DSA:3.40.228.10 151 379 9.8E-53 T 29-03-2018 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Pfam PF00384 Molybdopterin oxidoreductase 65 482 9.0E-35 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 SMART SM00926 3 62 4.4E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Gene3D G3DSA:3.40.50.740 67 150 4.6E-14 T 29-03-2018 AM474_RS06995 ce19058ce0a21cc088a29afd7395d793 702 Gene3D G3DSA:2.20.25.90 2 66 1.0E-8 T 29-03-2018 AM474_RS17900 a60d27b0d9fabf24de97e03732b5b573 388 Pfam PF13401 AAA domain 147 283 3.8E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17900 a60d27b0d9fabf24de97e03732b5b573 388 SUPERFAMILY SSF52540 135 348 1.82E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17900 a60d27b0d9fabf24de97e03732b5b573 388 Gene3D G3DSA:1.10.260.40 1 135 9.4E-4 T 29-03-2018 AM474_RS17900 a60d27b0d9fabf24de97e03732b5b573 388 Gene3D G3DSA:3.40.50.300 136 305 2.0E-9 T 29-03-2018 AM474_RS04365 0452ed6af940d325eddaa765779f384e 198 SUPERFAMILY SSF53448 8 189 7.77E-30 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS04365 0452ed6af940d325eddaa765779f384e 198 Gene3D G3DSA:3.90.550.10 5 197 7.8E-27 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS04365 0452ed6af940d325eddaa765779f384e 198 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 9 191 9.8E-59 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM474_RS04365 0452ed6af940d325eddaa765779f384e 198 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 194 25.757 T 29-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 AM474_RS04365 0452ed6af940d325eddaa765779f384e 198 Pfam PF12804 MobA-like NTP transferase domain 12 165 3.0E-31 T 29-03-2018 IPR025877 MobA-like NTP transferase AM474_RS18330 0679abcce123f99e88ceb25b8544a9f1 272 Pfam PF00149 Calcineurin-like phosphoesterase 17 203 6.6E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS18330 0679abcce123f99e88ceb25b8544a9f1 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 8.0E-26 T 29-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 AM474_RS18330 0679abcce123f99e88ceb25b8544a9f1 272 Gene3D G3DSA:3.60.21.10 1 264 1.3E-37 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS18330 0679abcce123f99e88ceb25b8544a9f1 272 SUPERFAMILY SSF56300 16 267 3.23E-55 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS18330 0679abcce123f99e88ceb25b8544a9f1 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 14 258 41.953 T 29-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 Pfam PF00593 TonB dependent receptor 355 819 1.9E-70 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 SUPERFAMILY SSF56935 135 820 4.07E-145 T 29-03-2018 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 277 2.7E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 820 3.4E-146 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 Gene3D G3DSA:2.40.170.20 291 820 9.9E-92 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 SMART SM00965 78 129 2.9E-9 T 29-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 AM474_RS31975 4c78f3cf546af6e013cc5a1520cd8680 820 Gene3D G3DSA:2.170.130.10 135 285 2.7E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS11805 8438ec87960d829b88c8ed7accc234c5 284 Gene3D G3DSA:3.30.565.40 91 196 0.023 T 29-03-2018 AM474_RS11805 8438ec87960d829b88c8ed7accc234c5 284 Gene3D G3DSA:3.90.640.20 198 278 3.3E-13 T 29-03-2018 IPR021729 Domain of unknown function DUF3298 AM474_RS11805 8438ec87960d829b88c8ed7accc234c5 284 Pfam PF11738 Protein of unknown function (DUF3298) 200 268 1.5E-11 T 29-03-2018 IPR021729 Domain of unknown function DUF3298 AM474_RS21705 ce1aed3d297dc4e954554b1cf5dfb647 190 SUPERFAMILY SSF101874 18 188 8.89E-16 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21705 ce1aed3d297dc4e954554b1cf5dfb647 190 Pfam PF04264 YceI-like domain 20 160 8.2E-8 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21705 ce1aed3d297dc4e954554b1cf5dfb647 190 PIRSF PIRSF029811 1 190 5.2E-62 T 29-03-2018 IPR027016 Uncharacterised protein with YceI domain AM474_RS21705 ce1aed3d297dc4e954554b1cf5dfb647 190 SMART SM00867 19 188 2.4E-10 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21705 ce1aed3d297dc4e954554b1cf5dfb647 190 Gene3D G3DSA:2.40.128.110 16 190 7.8E-20 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS08480 c7f76ac60ce40a014d6e9b40be65034b 276 Pfam PF06067 Domain of unknown function (DUF932) 37 265 1.7E-60 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM474_RS10020 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 SUPERFAMILY SSF55486 39 251 4.83E-38 T 29-03-2018 AM474_RS10020 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 249 6.8E-88 T 29-03-2018 IPR010384 MtfA family AM474_RS10020 ab5a9c660dafc2f9cb3cf004aa02f5f1 276 Gene3D G3DSA:3.40.390.10 41 251 4.8E-24 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM474_RS14715 279db2d70a68c828fc399d14c6f9d47c 517 Gene3D G3DSA:3.30.750.24 416 508 3.3E-14 T 29-03-2018 IPR002645 STAS domain AM474_RS14715 279db2d70a68c828fc399d14c6f9d47c 517 SUPERFAMILY SSF52091 426 503 1.37E-13 T 29-03-2018 IPR002645 STAS domain AM474_RS14715 279db2d70a68c828fc399d14c6f9d47c 517 Pfam PF13466 STAS domain 451 503 1.4E-7 T 29-03-2018 IPR002645 STAS domain AM474_RS14715 279db2d70a68c828fc399d14c6f9d47c 517 Pfam PF00916 Sulfate permease family 27 385 7.9E-71 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 59.203 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 Gene3D G3DSA:3.40.309.10 268 465 3.7E-74 T 29-03-2018 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.5E-227 T 29-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 SUPERFAMILY SSF53720 5 483 7.07E-178 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 2.4E-181 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS15915 783e979b20286b96ff6766f3bf32c808 490 Gene3D G3DSA:3.40.605.10 1 267 4.6E-111 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS05170 027c6cc89c7f84c92770e4231eac391a 454 Pfam PF04966 Carbohydrate-selective porin, OprB family 80 454 1.7E-119 T 29-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AM474_RS14245 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.20.120.80 77 295 8.1E-75 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14245 ca6c48466a5683aa24913dcc16163538 295 Pfam PF00510 Cytochrome c oxidase subunit III 7 294 2.3E-50 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14245 ca6c48466a5683aa24913dcc16163538 295 Gene3D G3DSA:1.10.287.70 1 76 5.9E-24 T 29-03-2018 AM474_RS14245 ca6c48466a5683aa24913dcc16163538 295 SUPERFAMILY SSF81452 3 294 7.85E-85 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 SUPERFAMILY SSF53850 94 300 4.16E-46 T 29-03-2018 AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 Gene3D G3DSA:3.40.190.10 182 268 1.7E-29 T 29-03-2018 AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 SUPERFAMILY SSF46785 12 117 8.17E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 Gene3D G3DSA:3.40.190.10 97 181 1.0E-16 T 29-03-2018 AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 Gene3D G3DSA:1.10.10.10 6 89 4.0E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 Pfam PF03466 LysR substrate binding domain 93 298 1.5E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS01255 ba683b4e06a7f0bae571281f3706af5c 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 8.2E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00225 24e8951131f874c416f4dbd8ced12021 177 Pfam PF04352 ProQ/FINO family 40 146 5.8E-32 T 29-03-2018 IPR016103 ProQ/FinO domain AM474_RS00225 24e8951131f874c416f4dbd8ced12021 177 SMART SM00945 36 150 1.2E-43 T 29-03-2018 IPR016103 ProQ/FinO domain AM474_RS00225 24e8951131f874c416f4dbd8ced12021 177 Gene3D G3DSA:1.10.1710.10 4 154 2.4E-37 T 29-03-2018 IPR016103 ProQ/FinO domain AM474_RS00225 24e8951131f874c416f4dbd8ced12021 177 SUPERFAMILY SSF48657 5 148 3.66E-37 T 29-03-2018 IPR016103 ProQ/FinO domain AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF48498 79 184 8.9E-14 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 56 1.2E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.2E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.2E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 Gene3D G3DSA:1.10.10.60 5 58 2.9E-16 T 29-03-2018 AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 Gene3D G3DSA:1.10.357.10 59 185 8.2E-18 T 29-03-2018 AM474_RS25205 6f6fa15fe03627599bd2c968fe0bf0b9 186 SUPERFAMILY SSF46689 5 72 2.26E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 327 3.1E-32 T 29-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 Gene3D G3DSA:3.40.50.720 117 300 5.1E-57 T 29-03-2018 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 2.3E-60 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 Gene3D G3DSA:3.40.50.720 1 116 1.0E-31 T 29-03-2018 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 SUPERFAMILY SSF52283 2 134 1.98E-38 T 29-03-2018 AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 29-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 SUPERFAMILY SSF51735 102 298 1.84E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23345 58c128e4667173750027d6ef760aaa71 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 29-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 29-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-39 T 29-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 PIRSF PIRSF002161 1 179 4.0E-64 T 29-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 Pfam PF00281 Ribosomal protein L5 24 80 7.7E-29 T 29-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 SUPERFAMILY SSF55282 3 179 1.22E-77 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.121 T 29-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11110 d099d5dc95938583016e3358d4355599 179 Gene3D G3DSA:3.30.1440.10 1 179 1.0E-77 T 29-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS14885 a1bf89af156543d94337ad46555302db 135 Gene3D G3DSA:3.30.230.10 1 120 1.2E-30 T 29-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM474_RS14885 a1bf89af156543d94337ad46555302db 135 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 29-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 AM474_RS14885 a1bf89af156543d94337ad46555302db 135 SUPERFAMILY SSF54211 6 115 3.54E-30 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS14885 a1bf89af156543d94337ad46555302db 135 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 113 6.6E-27 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM474_RS14885 a1bf89af156543d94337ad46555302db 135 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 17.822 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM474_RS14885 a1bf89af156543d94337ad46555302db 135 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 92 4.0E-38 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM474_RS14885 a1bf89af156543d94337ad46555302db 135 Pfam PF00825 Ribonuclease P 6 113 2.0E-31 T 29-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 27.053 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 SUPERFAMILY SSF52540 22 202 3.87E-32 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 198 2.0E-69 T 29-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 Gene3D G3DSA:3.40.50.300 19 84 1.9E-11 T 29-03-2018 AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 Pfam PF01926 50S ribosome-binding GTPase 33 150 3.2E-17 T 29-03-2018 IPR006073 GTP binding domain GO:0005525 AM474_RS15285 bf562ad427a62e24584d02afc192f652 215 Gene3D G3DSA:3.40.50.300 85 215 8.7E-12 T 29-03-2018 AM474_RS09995 ed90c6d450404cebc44945fa5a416088 273 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 5 250 40.18 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM474_RS09995 ed90c6d450404cebc44945fa5a416088 273 PIRSF PIRSF018982 1 261 3.6E-107 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM474_RS09995 ed90c6d450404cebc44945fa5a416088 273 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 13 250 1.5E-94 T 29-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM474_RS21850 ceab342316ee7737469ed2568bba3ae8 253 SUPERFAMILY SSF88713 6 165 3.06E-15 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS21850 ceab342316ee7737469ed2568bba3ae8 253 Gene3D G3DSA:3.20.20.370 2 251 3.0E-16 T 29-03-2018 AM474_RS21850 ceab342316ee7737469ed2568bba3ae8 253 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 6 159 3.7E-32 T 29-03-2018 IPR018763 Protein of unknown function DUF2334 AM474_RS27780 cd847cc77ba9658e3218a62f80171687 137 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 2 125 1.2E-51 T 29-03-2018 IPR013400 Type III secretion system chaperone, YscW AM474_RS27780 cd847cc77ba9658e3218a62f80171687 137 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 21 113 3.1E-11 T 29-03-2018 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 SUPERFAMILY SSF47203 234 390 9.02E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:1.10.540.10 2 113 3.9E-18 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 234 369 1.5E-16 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 SUPERFAMILY SSF56645 5 215 4.97E-42 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:2.40.110.10 114 218 3.7E-13 T 29-03-2018 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 Gene3D G3DSA:1.20.140.10 229 394 4.2E-22 T 29-03-2018 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 112 7.4E-12 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31365 00ff8b5dadefbd26ab0234be8a797eaf 394 PIRSF PIRSF016578 1 392 8.8E-31 T 29-03-2018 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 433 1.0E-160 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 434 40.731 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 236 268 - T 29-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 Pfam PF00815 Histidinol dehydrogenase 30 433 1.1E-168 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 207 232 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 143 169 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 258 277 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 177 203 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PRINTS PR00083 Histidinol dehydrogenase signature 236 257 2.7E-88 T 29-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 Gene3D G3DSA:3.40.50.1980 233 378 9.8E-69 T 29-03-2018 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 PIRSF PIRSF000099 8 436 6.0E-159 T 29-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 SUPERFAMILY SSF53720 33 434 2.35E-86 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS21145 3913815ea0d82374a1dbb220ad719f22 440 Gene3D G3DSA:3.40.50.1980 32 232 1.9E-87 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:1.10.150.20 181 265 8.3E-24 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:1.20.1060.10 527 641 5.1E-32 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SUPERFAMILY SSF56672 506 913 7.56E-160 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SMART SM00474 312 501 2.9E-36 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 269 6.3E-27 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SUPERFAMILY SSF88723 5 167 8.41E-53 T 29-03-2018 IPR029060 PIN domain-like AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Pfam PF00476 DNA polymerase family A 539 911 6.3E-153 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:3.40.50.1010 4 180 1.6E-63 T 29-03-2018 IPR029060 PIN domain-like AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SUPERFAMILY SSF47807 168 288 1.14E-28 T 29-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:3.30.70.370 642 737 9.3E-17 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:3.30.70.370 739 913 4.2E-54 T 29-03-2018 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 ProSitePatterns PS00447 DNA polymerase family A signature. 739 758 - T 29-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SMART SM00475 4 266 4.6E-116 T 29-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Pfam PF01612 3'-5' exonuclease 313 500 1.5E-38 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 TIGRFAM TIGR00593 pola: DNA polymerase I 6 913 1.2E-283 T 29-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 1.2E-50 T 29-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SMART SM00279 170 205 6.1E-12 T 29-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 Gene3D G3DSA:3.30.420.10 302 526 6.5E-53 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 873 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 678 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 764 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 830 846 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 798 809 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 662 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 685 708 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 728 1.0E-77 T 29-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SMART SM00482 671 877 2.6E-117 T 29-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS15280 945657451d0a541177ffbcc96531eec0 913 SUPERFAMILY SSF53098 311 501 4.34E-55 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS18150 f60d184f1f8d564a7c7877b621eda059 378 Pfam PF00534 Glycosyl transferases group 1 185 335 5.1E-29 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS18150 f60d184f1f8d564a7c7877b621eda059 378 Pfam PF13439 Glycosyltransferase Family 4 41 172 3.9E-9 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS18150 f60d184f1f8d564a7c7877b621eda059 378 SUPERFAMILY SSF53756 8 365 3.4E-62 T 29-03-2018 AM474_RS18150 f60d184f1f8d564a7c7877b621eda059 378 Gene3D G3DSA:3.40.50.2000 185 354 7.3E-39 T 29-03-2018 AM474_RS18150 f60d184f1f8d564a7c7877b621eda059 378 Gene3D G3DSA:3.40.50.2000 6 184 8.2E-6 T 29-03-2018 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 Gene3D G3DSA:3.10.310.10 132 266 8.5E-36 T 29-03-2018 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 256 2.6E-50 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 Pfam PF02567 Phenazine biosynthesis-like protein 10 256 8.5E-50 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 Gene3D G3DSA:3.10.310.10 1 131 3.5E-27 T 29-03-2018 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 PIRSF PIRSF016184 3 278 2.0E-61 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS25905 d8bf93fab0c9c45b7dec4d081a26707c 278 SUPERFAMILY SSF54506 4 276 1.68E-67 T 29-03-2018 AM474_RS12205 569c3b21ff1ca0f8865d10423c4c29f5 325 SUPERFAMILY SSF50891 180 304 1.52E-9 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS12205 569c3b21ff1ca0f8865d10423c4c29f5 325 SMART SM00797 24 312 2.1E-133 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS12205 569c3b21ff1ca0f8865d10423c4c29f5 325 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 320 7.6E-77 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS12205 569c3b21ff1ca0f8865d10423c4c29f5 325 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 298 4.0E-83 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 Gene3D G3DSA:1.10.260.40 2 67 9.3E-13 T 29-03-2018 AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 Pfam PF13560 Helix-turn-helix domain 5 61 2.6E-8 T 29-03-2018 AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 SUPERFAMILY SSF47413 3 69 5.07E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 SMART SM00530 9 64 3.1E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 Gene3D G3DSA:2.60.120.10 68 186 3.6E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 SUPERFAMILY SSF51182 57 179 2.41E-27 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS20890 6f6c5b44fdea0177171d297f549e20e0 187 Pfam PF07883 Cupin domain 109 175 1.7E-17 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS31170 599b0125a4dad21576172a8222e86792 193 Pfam PF07883 Cupin domain 126 184 9.3E-11 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS31170 599b0125a4dad21576172a8222e86792 193 SUPERFAMILY SSF51182 56 190 1.21E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS31170 599b0125a4dad21576172a8222e86792 193 Gene3D G3DSA:1.10.260.40 6 88 1.1E-15 T 29-03-2018 AM474_RS31170 599b0125a4dad21576172a8222e86792 193 Pfam PF01381 Helix-turn-helix 19 69 2.6E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS31170 599b0125a4dad21576172a8222e86792 193 SMART SM00530 16 71 1.7E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS31170 599b0125a4dad21576172a8222e86792 193 SUPERFAMILY SSF47413 12 74 8.58E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS31170 599b0125a4dad21576172a8222e86792 193 Gene3D G3DSA:2.60.120.10 97 192 7.6E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS12965 16dd1902ad59694c44583e847a1b107c 157 Gene3D G3DSA:3.60.21.10 2 157 9.1E-20 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS12965 16dd1902ad59694c44583e847a1b107c 157 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 9 152 3.1E-24 T 29-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 AM474_RS12965 16dd1902ad59694c44583e847a1b107c 157 SUPERFAMILY SSF56300 8 157 9.77E-35 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS12965 16dd1902ad59694c44583e847a1b107c 157 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 103 127 - T 29-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site AM474_RS12965 16dd1902ad59694c44583e847a1b107c 157 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 145 4.1E-31 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 Gene3D G3DSA:3.40.50.10090 11 56 7.5E-11 T 29-03-2018 AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 Gene3D G3DSA:3.40.50.720 57 266 2.5E-50 T 29-03-2018 AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.6E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 253 6.7E-54 T 29-03-2018 AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 197 0.001 T 29-03-2018 AM474_RS03620 c5afc0219e028f3f18d52001a3a6c796 292 SUPERFAMILY SSF51735 13 254 1.85E-69 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 Gene3D G3DSA:1.20.5.40 108 137 2.9E-18 T 29-03-2018 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 Pfam PF00239 Resolvase, N terminal domain 6 139 2.8E-39 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 Gene3D G3DSA:1.10.10.60 139 186 5.3E-10 T 29-03-2018 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 SMART SM00857 5 139 2.1E-47 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 Gene3D G3DSA:3.40.50.1390 4 107 1.5E-32 T 29-03-2018 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 29-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 1.0E-11 T 29-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 SUPERFAMILY SSF46689 141 183 3.19E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01755 cda30d61f7ecb0a9b6e1959d9c8c0a35 186 SUPERFAMILY SSF53041 6 139 1.96E-40 T 29-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.20.20.60 167 325 1.2E-56 T 29-03-2018 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 298 316 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 273 297 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 221 247 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 248 272 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 61 77 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 317 333 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 PRINTS PR01050 Pyruvate kinase family signature 188 202 2.9E-49 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 1.9E-26 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:2.40.33.10 104 166 2.5E-20 T 29-03-2018 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Pfam PF00224 Pyruvate kinase, barrel domain 4 342 1.6E-122 T 29-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 29-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.40.1380.20 326 479 4.6E-41 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF50800 72 165 4.36E-25 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 478 3.6E-159 T 29-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 Gene3D G3DSA:3.20.20.60 1 103 7.2E-17 T 29-03-2018 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF51621 169 343 6.63E-92 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF51621 2 77 6.63E-92 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS21760 6d73115d428a6affc3860c18af9df46b 483 SUPERFAMILY SSF52935 327 479 5.36E-36 T 29-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AM474_RS00655 5b582e4cba6f8cffdee05107e296e2d4 266 Gene3D G3DSA:3.90.226.10 6 220 3.5E-51 T 29-03-2018 AM474_RS00655 5b582e4cba6f8cffdee05107e296e2d4 266 Gene3D G3DSA:1.10.12.10 221 265 4.6E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS00655 5b582e4cba6f8cffdee05107e296e2d4 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 263 1.4E-44 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS00655 5b582e4cba6f8cffdee05107e296e2d4 266 SUPERFAMILY SSF52096 2 263 2.56E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Pfam PF02817 e3 binding domain 139 173 2.1E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 SUPERFAMILY SSF51230 3 96 8.38E-26 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Gene3D G3DSA:3.90.1170.30 1 49 1.4E-15 T 29-03-2018 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Gene3D G3DSA:4.10.320.10 134 184 9.7E-16 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Pfam PF00364 Biotin-requiring enzyme 5 76 6.6E-19 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 SUPERFAMILY SSF47005 133 178 3.92E-11 T 29-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 SUPERFAMILY SSF52777 192 427 1.42E-78 T 29-03-2018 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Gene3D G3DSA:3.30.559.10 185 427 3.3E-78 T 29-03-2018 AM474_RS30855 d4823373d5f77cad2816215e6e1bd60c 428 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 198 426 9.4E-79 T 29-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 AM474_RS13800 c3d9b170d2aa93e4cf48195b343393c5 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 280 1.9E-53 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS13800 c3d9b170d2aa93e4cf48195b343393c5 300 SUPERFAMILY SSF51197 13 296 2.61E-89 T 29-03-2018 AM474_RS13800 c3d9b170d2aa93e4cf48195b343393c5 300 Gene3D G3DSA:3.60.130.10 1 300 4.7E-74 T 29-03-2018 AM474_RS09040 27d75a3976e954bf1908c7658fb8a3f2 375 Pfam PF01266 FAD dependent oxidoreductase 5 347 2.3E-45 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS09040 27d75a3976e954bf1908c7658fb8a3f2 375 Gene3D G3DSA:3.50.50.60 2 375 2.4E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09040 27d75a3976e954bf1908c7658fb8a3f2 375 SUPERFAMILY SSF51905 4 216 1.26E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09040 27d75a3976e954bf1908c7658fb8a3f2 375 SUPERFAMILY SSF51905 309 357 1.26E-39 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07785 5d5865f6b28312c3c1d39b69c573ade0 226 Gene3D G3DSA:3.30.420.40 1 139 1.6E-38 T 29-03-2018 AM474_RS07785 5d5865f6b28312c3c1d39b69c573ade0 226 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 216 7.2E-62 T 29-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AM474_RS07785 5d5865f6b28312c3c1d39b69c573ade0 226 SUPERFAMILY SSF53067 4 106 3.11E-28 T 29-03-2018 AM474_RS07785 5d5865f6b28312c3c1d39b69c573ade0 226 SUPERFAMILY SSF53067 109 214 3.37E-25 T 29-03-2018 AM474_RS07785 5d5865f6b28312c3c1d39b69c573ade0 226 Pfam PF00814 Glycoprotease family 32 150 3.3E-28 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 6.8E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 6.8E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 6.8E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 6.8E-18 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 280 1.3E-31 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 282 2.9E-124 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.10.10.10 223 282 1.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88659 197 282 3.18E-18 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.249 T 29-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04545 Sigma-70, region 4 229 279 1.1E-15 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 SUPERFAMILY SSF88946 15 123 2.09E-39 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Gene3D G3DSA:1.10.601.10 14 123 1.3E-34 T 29-03-2018 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 41 6.9E-6 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 Pfam PF04542 Sigma-70 region 2 55 123 1.1E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12830 d40ecc598d4fb6cca09f5e79fe0e32bb 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 29-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 SUPERFAMILY SSF51230 80 155 2.62E-25 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 6.1E-60 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 Pfam PF00364 Biotin-requiring enzyme 82 155 4.4E-26 T 29-03-2018 IPR000089 Biotin/lipoyl attachment AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 Gene3D G3DSA:2.40.50.100 4 156 4.4E-23 T 29-03-2018 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 1.3E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 1.3E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS18975 9b387a2d07e3cf2a79d9a5dd7e7c09d0 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 1.3E-17 T 29-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AM474_RS31155 735375a4210eaf0b969a0d77a34d5093 340 Pfam PF13379 NMT1-like family 33 273 7.3E-24 T 29-03-2018 AM474_RS31155 735375a4210eaf0b969a0d77a34d5093 340 Gene3D G3DSA:3.40.190.10 30 138 4.7E-13 T 29-03-2018 AM474_RS31155 735375a4210eaf0b969a0d77a34d5093 340 SUPERFAMILY SSF53850 35 271 2.72E-30 T 29-03-2018 AM474_RS31155 735375a4210eaf0b969a0d77a34d5093 340 Gene3D G3DSA:3.40.190.10 139 333 1.5E-17 T 29-03-2018 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 165 187 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 79 98 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 42 66 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 2 21 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 135 153 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 PRINTS PR00783 Major intrinsic protein family signature 204 224 9.8E-51 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 ProSitePatterns PS00221 MIP family signature. 60 68 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 SUPERFAMILY SSF81338 1 225 3.92E-66 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 Pfam PF00230 Major intrinsic protein 2 221 2.9E-46 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 221 1.4E-57 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 Gene3D G3DSA:1.20.1080.10 1 229 7.2E-70 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM474_RS10040 52581fe4642175b318b933d2eeba4d48 229 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 228 35.146 T 29-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF47413 3 61 2.49E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF01381 Helix-turn-helix 7 60 9.7E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:2.10.109.10 109 235 1.1E-19 T 29-03-2018 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SMART SM00530 6 60 3.3E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Gene3D G3DSA:1.10.260.40 1 68 5.1E-16 T 29-03-2018 AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 SUPERFAMILY SSF51306 101 233 6.54E-22 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS23225 d341dc888990dd6c8e58fb6d7fdfbe5f 237 Pfam PF00717 Peptidase S24-like 148 214 1.4E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 SMART SM00257 68 112 1.9E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 Gene3D G3DSA:3.10.350.10 52 167 2.7E-15 T 29-03-2018 AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 Pfam PF01551 Peptidase family M23 197 290 3.0E-30 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 Pfam PF01476 LysM domain 69 109 2.6E-13 T 29-03-2018 IPR018392 LysM domain AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 SUPERFAMILY SSF51261 68 294 8.89E-53 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS07475 dc47db0b6fc4336f7906843aaa1b2aa7 297 Gene3D G3DSA:2.70.70.10 168 297 1.9E-35 T 29-03-2018 AM474_RS28510 5f41706b0f4003bdaa2df448e3a86bb0 154 SUPERFAMILY SSF54001 7 100 2.99E-6 T 29-03-2018 AM474_RS28510 5f41706b0f4003bdaa2df448e3a86bb0 154 Gene3D G3DSA:3.90.1720.10 4 125 4.9E-8 T 29-03-2018 AM474_RS21900 4f04c44d66a718dbb743dc4d99feeb43 394 Gene3D G3DSA:3.40.50.2300 10 140 0.012 T 29-03-2018 AM474_RS21900 4f04c44d66a718dbb743dc4d99feeb43 394 Gene3D G3DSA:3.40.50.300 150 374 3.1E-21 T 29-03-2018 AM474_RS21900 4f04c44d66a718dbb743dc4d99feeb43 394 Pfam PF16968 Pilus assembly protein TadZ N-terminal 1 133 4.2E-87 T 29-03-2018 IPR031580 Pilus assembly protein TadZ, N-terminal AM474_RS21900 4f04c44d66a718dbb743dc4d99feeb43 394 SUPERFAMILY SSF52540 150 372 7.54E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 SUPERFAMILY SSF51735 145 310 2.32E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 SMART SM00829 16 340 3.4E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 Gene3D G3DSA:3.90.180.10 4 154 7.7E-56 T 29-03-2018 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 136 3.2E-33 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 Pfam PF00107 Zinc-binding dehydrogenase 181 304 4.2E-29 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 Gene3D G3DSA:3.40.50.720 155 335 7.0E-37 T 29-03-2018 AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 SUPERFAMILY SSF50129 312 340 2.59E-58 T 29-03-2018 IPR011032 GroES-like AM474_RS15635 abad658ff229878c98ee2b8ec5dc530b 342 SUPERFAMILY SSF50129 2 148 2.59E-58 T 29-03-2018 IPR011032 GroES-like AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 SUPERFAMILY SSF53335 32 308 1.24E-68 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 Pfam PF01564 Spermine/spermidine synthase domain 88 261 6.9E-38 T 29-03-2018 AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 Pfam PF17284 Spermidine synthase tetramerisation domain 43 84 3.4E-9 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 Gene3D G3DSA:3.40.50.150 85 317 4.0E-44 T 29-03-2018 AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 32 316 33.225 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 Gene3D G3DSA:2.30.140.10 34 84 1.1E-11 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS19360 a4b2e944c07f192fd378b855774d23f3 349 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 108 121 - T 29-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 145 2.4E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 SUPERFAMILY SSF50129 13 173 1.89E-50 T 29-03-2018 IPR011032 GroES-like AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 Gene3D G3DSA:3.40.50.720 175 284 3.7E-23 T 29-03-2018 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 Gene3D G3DSA:3.90.180.10 1 174 1.5E-50 T 29-03-2018 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 Gene3D G3DSA:3.40.50.20 285 343 2.4E-5 T 29-03-2018 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 SUPERFAMILY SSF51735 150 314 4.64E-43 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 SMART SM00829 12 344 2.1E-4 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS30990 f38e32b83cc96f3788fab13f3f264e99 353 Pfam PF00107 Zinc-binding dehydrogenase 187 310 5.5E-23 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 1.7E-80 T 29-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 152 1.3E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 0.0021 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 Gene3D G3DSA:2.160.10.10 64 236 8.1E-42 T 29-03-2018 AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 SUPERFAMILY SSF51161 2 169 9.7E-58 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS08780 aac57ccc09e3f450777ee8e55249554a 258 Gene3D G3DSA:1.10.3130.10 1 63 1.0E-26 T 29-03-2018 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 SUPERFAMILY SSF46992 3 86 3.14E-33 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 91 6.0E-35 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 Pfam PF01649 Ribosomal protein S20 2 84 8.0E-29 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 Gene3D G3DSA:1.20.58.110 1 91 1.5E-31 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.91 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20530 0f99b2ba4f548c4219b86f4f7d705ddb 91 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 85 7.8E-30 T 29-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS10670 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 24 143 5.1E-16 T 29-03-2018 AM474_RS10670 df436de628992cb39e7d59055c89c197 301 SUPERFAMILY SSF53807 29 287 6.28E-38 T 29-03-2018 AM474_RS10670 df436de628992cb39e7d59055c89c197 301 Gene3D G3DSA:3.40.50.1980 144 301 9.6E-29 T 29-03-2018 AM474_RS10670 df436de628992cb39e7d59055c89c197 301 Pfam PF01497 Periplasmic binding protein 33 280 1.4E-41 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM474_RS30720 b3bdf0cac261fc4d15ccd48dd761e372 339 Gene3D G3DSA:1.10.3690.10 110 245 1.2E-17 T 29-03-2018 AM474_RS30720 b3bdf0cac261fc4d15ccd48dd761e372 339 SUPERFAMILY SSF53955 154 336 4.33E-18 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS30720 b3bdf0cac261fc4d15ccd48dd761e372 339 Pfam PF16754 Bacterial toxin homologue of phage lysozyme, C-term 151 299 9.2E-18 T 29-03-2018 IPR031922 Bacterial toxin homologue of phage lysozyme, C-terminal AM474_RS30720 b3bdf0cac261fc4d15ccd48dd761e372 339 Gene3D G3DSA:1.10.530.40 246 337 2.1E-4 T 29-03-2018 IPR023347 Lysozyme domain GO:0003796 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 SUPERFAMILY SSF46955 1 111 1.61E-24 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.7E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.7E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 6.7E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.6E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 Gene3D G3DSA:1.10.1660.10 55 139 7.0E-13 T 29-03-2018 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 Gene3D G3DSA:1.10.1660.10 1 54 5.7E-18 T 29-03-2018 AM474_RS01450 4ea7a6f0afc5e7150ff6428bd70a0c0f 162 SMART SM00422 1 69 3.0E-20 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 SUPERFAMILY SSF55681 7 324 2.99E-60 T 29-03-2018 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 Pfam PF13393 Histidyl-tRNA synthetase 12 321 5.2E-118 T 29-03-2018 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 373 34.807 T 29-03-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 PIRSF PIRSF001549 7 388 9.2E-48 T 29-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 Gene3D G3DSA:3.30.930.10 20 314 4.7E-49 T 29-03-2018 AM474_RS18485 226e5c3375a6eca854171ad627b73547 394 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 324 3.6E-90 T 29-03-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 AM474_RS19570 b7ccbfbfb60333acb3cc61bb9a8e1a26 97 Pfam PF11006 Protein of unknown function (DUF2845) 23 94 5.7E-18 T 29-03-2018 IPR021268 Protein of unknown function DUF2845 AM474_RS14065 179fc8ffdfb302fbd780bdf3437519b7 350 SUPERFAMILY SSF53590 39 348 1.09E-97 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM474_RS14065 179fc8ffdfb302fbd780bdf3437519b7 350 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 45 55 - T 29-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AM474_RS14065 179fc8ffdfb302fbd780bdf3437519b7 350 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 340 2.4E-87 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM474_RS14065 179fc8ffdfb302fbd780bdf3437519b7 350 Gene3D G3DSA:3.90.245.10 26 349 6.0E-105 T 29-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AM474_RS06775 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 182 287 8.63E-9 T 29-03-2018 AM474_RS06775 ab81ad4fe4b86eda17e794bb85af857e 299 SUPERFAMILY SSF103481 46 147 8.37E-7 T 29-03-2018 AM474_RS06775 ab81ad4fe4b86eda17e794bb85af857e 299 TIGRFAM TIGR00688 rarD: protein RarD 6 260 8.2E-56 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM474_RS19735 e23c7698e57ac332f458a2f21ff53b89 295 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 53 247 1.3E-42 T 29-03-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN AM474_RS19735 e23c7698e57ac332f458a2f21ff53b89 295 PIRSF PIRSF020419 1 293 1.2E-130 T 29-03-2018 IPR016773 Ferric uptake regulator, CjrA, predicted AM474_RS19735 e23c7698e57ac332f458a2f21ff53b89 295 SUPERFAMILY SSF159501 35 280 2.04E-67 T 29-03-2018 AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 290 1.2E-59 T 29-03-2018 IPR005218 Diacylglycerol/lipid kinase AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 Gene3D G3DSA:3.40.50.10330 2 135 8.0E-25 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 SUPERFAMILY SSF111331 4 291 2.4E-66 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 295 1.4E-144 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 125 4.8E-25 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 SMART SM00046 6 125 4.9E-14 T 29-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AM474_RS04330 9bf894b1dea938571efff9e5ebe49a6a 302 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 5 296 44.089 T 29-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.1E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 Gene3D G3DSA:3.10.610.10 37 142 1.1E-32 T 29-03-2018 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 199 1.3E-92 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 Gene3D G3DSA:2.10.70.20 146 202 1.2E-15 T 29-03-2018 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.8E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 SUPERFAMILY SSF54523 39 204 3.09E-46 T 29-03-2018 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 Pfam PF11612 Type II secretion system (T2SS), protein J 57 197 4.0E-45 T 29-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 AM474_RS04725 fbda5180177b7d91178cbe10925e6701 237 SUPERFAMILY SSF54523 7 47 2.67E-5 T 29-03-2018 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 1.3E-8 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 591 1.9E-34 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Gene3D G3DSA:1.20.140.10 272 464 6.6E-45 T 29-03-2018 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 SUPERFAMILY SSF47203 286 474 1.77E-52 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Gene3D G3DSA:1.10.540.10 19 155 1.0E-19 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 450 1.7E-25 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Gene3D G3DSA:2.40.110.10 160 271 1.5E-22 T 29-03-2018 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 SUPERFAMILY SSF56645 36 279 6.41E-58 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 7.6E-17 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS12160 ad828f15fc7e769fc4641408b37c3e2c 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.5E-11 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 Pfam PF00034 Cytochrome c 30 127 1.6E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 PRINTS PR00605 Class IC cytochrome C signature 322 333 2.6E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 PRINTS PR00605 Class IC cytochrome C signature 375 397 2.6E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 SUPERFAMILY SSF46626 176 292 1.51E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 SUPERFAMILY SSF46626 315 417 4.73E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 Gene3D G3DSA:1.10.760.10 155 301 4.9E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 Gene3D G3DSA:1.10.760.10 11 141 3.4E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 PIRSF PIRSF000018 2 432 6.0E-168 T 29-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 313 397 8.6E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 SUPERFAMILY SSF46626 19 152 2.26E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS30945 dcad76a4b3b8d364d3d97170aa78a889 439 Gene3D G3DSA:1.10.760.10 302 427 9.0E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 141 2.2E-33 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 SUPERFAMILY SSF50129 1 179 1.42E-53 T 29-03-2018 IPR011032 GroES-like AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 Gene3D G3DSA:3.90.180.10 1 171 7.8E-54 T 29-03-2018 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 Gene3D G3DSA:3.40.50.720 172 290 1.1E-27 T 29-03-2018 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 Pfam PF00107 Zinc-binding dehydrogenase 182 305 2.4E-24 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 SMART SM00829 7 343 1.2E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS10375 1ac161476e5cfe07890e007e4c6cefa3 352 SUPERFAMILY SSF51735 147 310 6.34E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 SUPERFAMILY SSF51161 252 439 2.45E-49 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:2.160.10.10 309 440 2.9E-32 T 29-03-2018 AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 SUPERFAMILY SSF53448 1 249 1.07E-63 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.5E-203 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 43.326 T 29-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF12804 MobA-like NTP transferase domain 6 121 2.6E-24 T 29-03-2018 IPR025877 MobA-like NTP transferase AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:3.90.550.10 2 241 9.5E-52 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 296 1.2E-7 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.5E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS14980 02e64a58f8cb2dd81ca2496fe8917a84 454 Gene3D G3DSA:2.160.10.10 242 308 1.4E-15 T 29-03-2018 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 453 503 3.7E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 616 46.887 T 29-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 407 420 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88946 115 450 7.72E-105 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04545 Sigma-70, region 4 551 604 1.0E-18 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 4.7E-13 T 29-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 513 615 9.16E-27 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 SUPERFAMILY SSF88659 456 529 1.0E-20 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 379 615 2.8E-122 T 29-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 576 591 6.5E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 591 602 6.5E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 407 420 6.5E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 431 439 6.5E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 PRINTS PR00046 Major sigma-70 factor signature 555 567 6.5E-31 T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04546 Sigma-70, non-essential region 139 352 3.1E-65 T 29-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04539 Sigma-70 region 3 462 538 7.3E-30 T 29-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF04542 Sigma-70 region 2 383 452 1.7E-21 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.601.10 2 114 1.9E-12 T 29-03-2018 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.601.10 115 452 1.1E-106 T 29-03-2018 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 6.6E-30 T 29-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 576 602 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 379 604 1.2E-37 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS11745 f4e3bef0593c9fb7908f78fefc3d7c60 617 Gene3D G3DSA:1.10.10.10 545 616 8.6E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02495 1afa4f62ba5d2a5dc1fb9ef47900c03a 149 Gene3D G3DSA:3.40.630.30 1 85 5.8E-13 T 29-03-2018 AM474_RS02495 1afa4f62ba5d2a5dc1fb9ef47900c03a 149 Pfam PF13673 Acetyltransferase (GNAT) domain 30 138 2.0E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS02495 1afa4f62ba5d2a5dc1fb9ef47900c03a 149 Gene3D G3DSA:3.40.630.30 86 148 3.7E-11 T 29-03-2018 AM474_RS02495 1afa4f62ba5d2a5dc1fb9ef47900c03a 149 SUPERFAMILY SSF55729 1 149 6.1E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 Gene3D G3DSA:2.40.50.100 33 93 7.2E-6 T 29-03-2018 AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 Gene3D G3DSA:2.40.50.100 162 369 3.2E-6 T 29-03-2018 AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 SUPERFAMILY SSF111369 51 260 1.26E-17 T 29-03-2018 AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 Gene3D G3DSA:1.10.287.470 101 159 7.2E-7 T 29-03-2018 AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 357 7.3E-60 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS25945 6362c290b9d62a0bd5b88fa5a0899f83 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 261 7.5E-15 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 Gene3D G3DSA:1.10.10.10 7 143 1.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 SMART SM00347 23 123 1.2E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 SUPERFAMILY SSF46785 7 138 3.71E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 Pfam PF12802 MarR family 30 89 2.9E-9 T 29-03-2018 AM474_RS23425 88352943d1ed732e57e9ba92d0418a79 186 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:2.60.40.10 92 471 0.15 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:2.60.40.10 617 822 4.5E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:1.20.5.50 968 1086 0.0054 T 29-03-2018 AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:1.20.5.170 906 937 0.0085 T 29-03-2018 AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:2.10.10.20 873 905 4.0E-7 T 29-03-2018 AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Pfam PF09327 Domain of unknown function (DUF1983) 1066 1144 2.2E-22 T 29-03-2018 IPR015406 Domain of unknown function DUF1983 AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Gene3D G3DSA:1.20.5.190 840 872 0.35 T 29-03-2018 AM474_RS02295 86ef10aec7cc08667089945f82e3aec9 1220 Pfam PF13550 Putative phage tail protein 345 505 6.4E-18 T 29-03-2018 IPR032876 Tip attachment protein J AM474_RS16525 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 1 120 2.6E-20 T 29-03-2018 AM474_RS16525 24493688c939210274733bc17a4d6305 251 Gene3D G3DSA:3.40.50.10090 126 251 2.7E-23 T 29-03-2018 AM474_RS16525 24493688c939210274733bc17a4d6305 251 SUPERFAMILY SSF69618 3 249 5.75E-55 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16525 24493688c939210274733bc17a4d6305 251 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 244 3.6E-37 T 29-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49354 24 150 1.41E-39 T 29-03-2018 IPR008962 PapD-like AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.10 152 248 9.5E-16 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 2.8E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 176 239 1.5E-12 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 SUPERFAMILY SSF49584 154 246 2.88E-13 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 132 147 2.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 106 123 2.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 171 186 2.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 78 99 2.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 PRINTS PR00969 Pili chaperone signature 29 38 2.3E-27 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS29965 67014f6fa2154d5fe1d9a633a2d9926f 248 Gene3D G3DSA:2.60.40.10 28 151 1.5E-35 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30610 5962aae2aab2c6de037bb76f5effbb94 630 Gene3D G3DSA:1.20.120.330 143 297 7.3E-8 T 29-03-2018 AM474_RS30610 5962aae2aab2c6de037bb76f5effbb94 630 SUPERFAMILY SSF58104 163 278 4.97E-5 T 29-03-2018 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 359 4.2E-144 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 PIRSF PIRSF006004 4 368 8.3E-153 T 29-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 8 355 73.213 T 29-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Gene3D G3DSA:3.20.20.70 18 351 7.4E-41 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 Pfam PF04055 Radical SAM superfamily 112 280 8.8E-16 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS08730 92c7d0c715be41bf84b02fd7d4e8a2cb 379 SUPERFAMILY SSF102114 108 320 1.03E-13 T 29-03-2018 AM474_RS27715 1a924afcd5c68606b8b171de65b5d7b5 92 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 87 5.0E-44 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AM474_RS27715 1a924afcd5c68606b8b171de65b5d7b5 92 SUPERFAMILY SSF140591 2 90 3.73E-29 T 29-03-2018 AM474_RS27715 1a924afcd5c68606b8b171de65b5d7b5 92 Pfam PF09059 TyeA 6 86 2.7E-32 T 29-03-2018 IPR015144 Type III secretion system effector delivery regulator TyeA AM474_RS27715 1a924afcd5c68606b8b171de65b5d7b5 92 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 4 84 3.1E-21 T 29-03-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related AM474_RS06520 61d83691775bbfe737cd1211bf6cdefe 468 SUPERFAMILY SSF51905 182 307 5.61E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06520 61d83691775bbfe737cd1211bf6cdefe 468 SUPERFAMILY SSF51905 4 124 5.61E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06520 61d83691775bbfe737cd1211bf6cdefe 468 Pfam PF01266 FAD dependent oxidoreductase 31 393 6.5E-48 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS06520 61d83691775bbfe737cd1211bf6cdefe 468 Gene3D G3DSA:3.50.50.60 19 441 1.2E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 SMART SM00382 509 694 2.0E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 Gene3D G3DSA:1.20.1560.10 156 468 1.4E-34 T 29-03-2018 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 20 709 1.2E-271 T 29-03-2018 IPR017750 ATPase, type I secretion system AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 Gene3D G3DSA:3.40.50.300 469 720 5.4E-54 T 29-03-2018 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 Pfam PF00005 ABC transporter 505 648 4.5E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 Gene3D G3DSA:3.90.70.10 24 141 1.8E-13 T 29-03-2018 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 SUPERFAMILY SSF52540 476 709 1.26E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 Pfam PF00664 ABC transporter transmembrane region 173 432 2.4E-18 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 SUPERFAMILY SSF90123 157 467 3.14E-50 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS28680 8a5cb2fadf02c1e0f93d7abcb03f6184 723 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF46785 2 62 3.95E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 SUPERFAMILY SSF54909 65 146 5.77E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 3.6E-22 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 SMART SM00344 3 112 3.1E-42 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.2E-19 T 29-03-2018 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.6E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:3.30.70.920 56 148 5.0E-24 T 29-03-2018 AM474_RS29745 da855b455e6a2eed66232f3126b93067 158 Gene3D G3DSA:1.10.10.10 1 54 4.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31725 3fa0299992f761a2230a7b35f2cb3ff5 337 SMART SM01006 167 214 3.5E-21 T 29-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain AM474_RS31725 3fa0299992f761a2230a7b35f2cb3ff5 337 SUPERFAMILY SSF55729 135 329 2.79E-64 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS31725 3fa0299992f761a2230a7b35f2cb3ff5 337 Gene3D G3DSA:3.40.630.30 125 332 2.3E-24 T 29-03-2018 AM474_RS31725 3fa0299992f761a2230a7b35f2cb3ff5 337 Pfam PF13523 Acetyltransferase (GNAT) domain 170 315 1.4E-55 T 29-03-2018 AM474_RS16685 d3fbbfac9491b9a37f1ed4bc723e329d 203 PIRSF PIRSF006806 7 196 5.2E-33 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM474_RS16685 d3fbbfac9491b9a37f1ed4bc723e329d 203 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 193 6.7E-39 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM474_RS16685 d3fbbfac9491b9a37f1ed4bc723e329d 203 SUPERFAMILY SSF100950 8 200 4.33E-52 T 29-03-2018 AM474_RS16685 d3fbbfac9491b9a37f1ed4bc723e329d 203 Gene3D G3DSA:3.40.50.10420 2 199 1.8E-53 T 29-03-2018 AM474_RS16685 d3fbbfac9491b9a37f1ed4bc723e329d 203 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 193 4.0E-44 T 29-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 5.1E-73 T 29-03-2018 AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.4E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 Gene3D G3DSA:3.40.50.720 43 253 3.2E-67 T 29-03-2018 AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 Gene3D G3DSA:3.40.50.720 1 42 1.1E-8 T 29-03-2018 AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS27430 76f2a6d3643b0dd4b9fd389c8eb99937 253 SUPERFAMILY SSF51735 2 252 1.13E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 SUPERFAMILY SSF46785 1 80 1.85E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 SUPERFAMILY SSF53850 91 294 3.02E-45 T 29-03-2018 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-51 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:3.40.190.10 178 268 6.0E-23 T 29-03-2018 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:1.10.10.10 1 85 5.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 Gene3D G3DSA:3.40.190.10 89 177 2.5E-19 T 29-03-2018 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.8E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS15580 e78e92ef48c5726a543a5a62c6dd0d53 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.3E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 Pfam PF05199 GMC oxidoreductase 446 571 1.9E-26 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 Gene3D G3DSA:3.50.50.60 2 587 2.5E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 Pfam PF00732 GMC oxidoreductase 199 344 8.1E-9 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 SUPERFAMILY SSF51905 521 582 1.62E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 SUPERFAMILY SSF51905 7 341 1.62E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30940 eebac95eb2b363fa8dc1beca426807d7 591 SUPERFAMILY SSF54373 418 494 2.12E-10 T 29-03-2018 AM474_RS29945 bc4432473e49c6f9cd349f1529a8dd50 211 SMART SM00470 52 150 2.9E-6 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS29945 bc4432473e49c6f9cd349f1529a8dd50 211 Gene3D G3DSA:3.90.1530.10 43 154 3.2E-13 T 29-03-2018 AM474_RS29945 bc4432473e49c6f9cd349f1529a8dd50 211 Pfam PF02195 ParB-like nuclease domain 53 149 1.4E-12 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS29945 bc4432473e49c6f9cd349f1529a8dd50 211 SUPERFAMILY SSF110849 50 183 1.92E-18 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 3.7E-120 T 29-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 SUPERFAMILY SSF51905 2 313 3.39E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 Gene3D G3DSA:3.50.50.60 3 135 1.2E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 5.5E-42 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.5E-42 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.5E-42 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 5.5E-42 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.5E-42 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.1E-76 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 Gene3D G3DSA:3.50.50.60 263 316 7.7E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 Gene3D G3DSA:3.40.50.720 137 262 3.1E-24 T 29-03-2018 AM474_RS22910 df6b48baf5aa47b2c70345eb137e35d1 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 301 1.2E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18320 20a57aafdf6f8b60142e022471246ae8 205 SUPERFAMILY SSF55811 9 204 7.72E-50 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS18320 20a57aafdf6f8b60142e022471246ae8 205 Gene3D G3DSA:3.90.79.10 2 205 6.8E-49 T 29-03-2018 AM474_RS18320 20a57aafdf6f8b60142e022471246ae8 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 195 7.6E-53 T 29-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 AM474_RS18320 20a57aafdf6f8b60142e022471246ae8 205 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS18320 20a57aafdf6f8b60142e022471246ae8 205 Pfam PF00293 NUDIX domain 52 174 8.0E-15 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS07615 8c4214a466eb810c0226034d50909404 271 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 29-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AM474_RS07615 8c4214a466eb810c0226034d50909404 271 Pfam PF01148 Cytidylyltransferase family 3 264 1.8E-66 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 Gene3D G3DSA:3.40.30.10 73 107 3.9E-6 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 Pfam PF00085 Thioredoxin 5 106 4.6E-35 T 29-03-2018 IPR013766 Thioredoxin domain GO:0045454 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 72 83 6.2E-10 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 32 41 6.2E-10 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 PRINTS PR00421 Thioredoxin family signature 24 32 6.2E-10 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 SUPERFAMILY SSF52833 3 106 4.89E-40 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-39 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 Gene3D G3DSA:3.40.30.10 5 72 1.6E-27 T 29-03-2018 AM474_RS16625 2d836068f7e47d29b41c894e372dff5a 108 PIRSF PIRSF000077 2 108 2.8E-46 T 29-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM474_RS25040 c8f9628fb18d6ef318d0f8480136775f 409 SUPERFAMILY SSF103473 18 395 2.22E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25040 c8f9628fb18d6ef318d0f8480136775f 409 Gene3D G3DSA:1.20.1250.20 211 406 7.8E-21 T 29-03-2018 AM474_RS25040 c8f9628fb18d6ef318d0f8480136775f 409 Pfam PF07690 Major Facilitator Superfamily 22 356 7.9E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25040 c8f9628fb18d6ef318d0f8480136775f 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS25040 c8f9628fb18d6ef318d0f8480136775f 409 Gene3D G3DSA:1.20.1250.20 8 196 2.4E-24 T 29-03-2018 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 Gene3D G3DSA:3.50.50.60 2 128 7.5E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 8.7E-13 T 29-03-2018 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.7E-13 T 29-03-2018 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.7E-13 T 29-03-2018 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 3.2E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 2.9E-13 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 2.9E-13 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 258 276 2.9E-13 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.9E-13 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 Gene3D G3DSA:3.50.50.60 129 297 7.6E-13 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25915 886d282760fa8b7a50983d1fb6ceeb2c 297 SUPERFAMILY SSF51905 1 292 1.56E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.40.1010.10 2 126 8.5E-35 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 234 4.0E-94 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 Gene3D G3DSA:3.30.950.10 127 237 4.6E-31 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 SUPERFAMILY SSF53790 1 235 4.58E-71 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS28130 05564e8f930a92ff73b6c9fd340c8918 245 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 212 4.7E-47 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS31290 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 270 5.5E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31290 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 SUPERFAMILY SSF161098 7 277 3.08E-63 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31290 1cb4c314e3b48cd58d6f4f61d0d23ba6 277 Gene3D G3DSA:1.10.3720.10 12 267 6.4E-38 T 29-03-2018 AM474_RS03470 6f38a9eb804f5c394c65049cd37ee09c 227 SUPERFAMILY SSF52540 5 223 4.33E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03470 6f38a9eb804f5c394c65049cd37ee09c 227 Pfam PF00005 ABC transporter 25 171 9.7E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03470 6f38a9eb804f5c394c65049cd37ee09c 227 SMART SM00382 34 220 9.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS03470 6f38a9eb804f5c394c65049cd37ee09c 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS03470 6f38a9eb804f5c394c65049cd37ee09c 227 Gene3D G3DSA:3.40.50.300 1 227 7.2E-64 T 29-03-2018 AM474_RS29925 90daf316496a8a71b8b918d3722737c2 378 SUPERFAMILY SSF55961 226 371 7.76E-19 T 29-03-2018 AM474_RS29925 90daf316496a8a71b8b918d3722737c2 378 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 226 369 2.2E-23 T 29-03-2018 IPR019587 Polyketide cyclase/dehydrase AM474_RS29925 90daf316496a8a71b8b918d3722737c2 378 Pfam PF04116 Fatty acid hydroxylase superfamily 60 213 1.5E-10 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AM474_RS29925 90daf316496a8a71b8b918d3722737c2 378 Gene3D G3DSA:3.30.530.20 216 378 7.1E-20 T 29-03-2018 IPR023393 START-like domain AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 SUPERFAMILY SSF51735 4 231 3.14E-60 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 Gene3D G3DSA:3.40.50.720 2 176 4.3E-51 T 29-03-2018 AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 0.009 T 29-03-2018 AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 Pfam PF00106 short chain dehydrogenase 5 189 3.0E-47 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS18665 a1d68909b29bb75b6f83cb8bd7e33b31 253 Gene3D G3DSA:3.40.50.720 177 234 0.012 T 29-03-2018 AM474_RS15445 8e9e0bd4d506477208da1f46fe0ee617 97 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 97 1.1E-38 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS15445 8e9e0bd4d506477208da1f46fe0ee617 97 Pfam PF09498 Protein of unknown function (DUF2388) 28 96 3.1E-31 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 176 262 1.7E-30 T 29-03-2018 AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:3.40.190.10 89 175 1.1E-17 T 29-03-2018 AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF46785 5 84 1.19E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 Gene3D G3DSA:1.10.10.10 3 84 6.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 Pfam PF03466 LysR substrate binding domain 88 291 4.9E-48 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14515 61841e40a4f49f8cff558acf93d28826 306 SUPERFAMILY SSF53850 88 294 6.52E-52 T 29-03-2018 AM474_RS26065 312eca89103510b46f58edee0306f572 221 Pfam PF13578 Methyltransferase domain 84 187 1.6E-15 T 29-03-2018 AM474_RS26065 312eca89103510b46f58edee0306f572 221 SUPERFAMILY SSF53335 46 191 1.65E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS26065 312eca89103510b46f58edee0306f572 221 Gene3D G3DSA:3.40.50.150 53 211 6.2E-28 T 29-03-2018 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 Gene3D G3DSA:1.10.10.10 127 214 1.2E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 SMART SM00421 147 204 4.4E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 SUPERFAMILY SSF46894 132 211 2.07E-18 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.5E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.5E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.5E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 1.3E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 Pfam PF00072 Response regulator receiver domain 4 116 2.4E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 SUPERFAMILY SSF52172 2 132 9.53E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 SMART SM00448 2 115 6.8E-30 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00760 aa1d3827711d5574adbed81e6d432cc7 214 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-34 T 29-03-2018 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 Pfam PF00593 TonB dependent receptor 185 610 3.1E-46 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 SUPERFAMILY SSF56935 31 609 5.76E-120 T 29-03-2018 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 8.3E-30 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 611 2.1E-286 T 29-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 Gene3D G3DSA:2.40.170.20 160 610 4.1E-69 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS25420 3dd63bfff7803974a80206cf8c3a816a 612 Gene3D G3DSA:2.170.130.10 20 159 3.5E-36 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 SUPERFAMILY SSF55129 1 57 5.89E-20 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.751 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 Gene3D G3DSA:3.30.1390.20 4 58 7.8E-22 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 3.9E-20 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 PIRSF PIRSF002211 1 58 7.1E-24 T 29-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11080 bed1dda5b58a3fb6c37a198a2dae8687 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 52 1.2E-17 T 29-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AM474_RS10810 0babc5b6a81e89bf8ca34cb641bf637e 442 SUPERFAMILY SSF103473 8 436 4.58E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10810 0babc5b6a81e89bf8ca34cb641bf637e 442 Gene3D G3DSA:1.20.1250.20 227 442 6.5E-27 T 29-03-2018 AM474_RS10810 0babc5b6a81e89bf8ca34cb641bf637e 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS10810 0babc5b6a81e89bf8ca34cb641bf637e 442 Gene3D G3DSA:1.20.1250.20 17 213 5.1E-32 T 29-03-2018 AM474_RS10810 0babc5b6a81e89bf8ca34cb641bf637e 442 Pfam PF00083 Sugar (and other) transporter 48 438 1.3E-51 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS14880 c555a9deef9cb89758ebe9dc5b299734 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 4.0E-15 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS14880 c555a9deef9cb89758ebe9dc5b299734 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.7E-26 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS14880 c555a9deef9cb89758ebe9dc5b299734 44 Pfam PF00468 Ribosomal protein L34 1 44 2.1E-25 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS14880 c555a9deef9cb89758ebe9dc5b299734 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.452 T 29-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS14880 c555a9deef9cb89758ebe9dc5b299734 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 29-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 138 172 - T 29-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82689 177 272 2.35E-26 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF00924 Mechanosensitive ion channel 67 262 1.5E-49 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:2.30.30.60 124 173 3.2E-16 T 29-03-2018 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF82861 25 107 1.57E-16 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 Gene3D G3DSA:3.30.70.100 174 267 5.9E-23 T 29-03-2018 AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 SUPERFAMILY SSF50182 109 174 5.89E-18 T 29-03-2018 IPR010920 LSM domain AM474_RS21425 26010b9c83e8c4b6dec104bc7f2c8c71 278 Pfam PF05552 Conserved TM helix 15 59 7.2E-8 T 29-03-2018 IPR008910 Conserved TM helix AM474_RS05310 7308a74bf9cfac376ec4af9014e564ad 264 SMART SM00382 34 223 3.5E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05310 7308a74bf9cfac376ec4af9014e564ad 264 Pfam PF00005 ABC transporter 27 175 1.3E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS05310 7308a74bf9cfac376ec4af9014e564ad 264 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS05310 7308a74bf9cfac376ec4af9014e564ad 264 Gene3D G3DSA:3.40.50.300 6 260 5.1E-60 T 29-03-2018 AM474_RS05310 7308a74bf9cfac376ec4af9014e564ad 264 SUPERFAMILY SSF52540 9 236 4.44E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 Gene3D G3DSA:2.170.130.10 44 186 1.6E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 Pfam PF00593 TonB dependent receptor 283 764 6.6E-60 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 SUPERFAMILY SSF56935 75 766 9.71E-129 T 29-03-2018 AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 82 766 1.8E-87 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 749 766 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 178 6.6E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS20810 b6566976a08799261f7cde27c3a68f17 766 Gene3D G3DSA:2.40.170.20 195 766 2.3E-85 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS18790 c514cfa23c0e64d01b642496ac4295d9 255 SUPERFAMILY SSF56524 49 254 3.4E-66 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS18790 c514cfa23c0e64d01b642496ac4295d9 255 Gene3D G3DSA:3.90.420.10 69 254 1.1E-58 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS18790 c514cfa23c0e64d01b642496ac4295d9 255 Pfam PF00174 Oxidoreductase molybdopterin binding domain 100 244 1.2E-35 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 Pfam PF00106 short chain dehydrogenase 3 190 1.2E-27 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 SUPERFAMILY SSF51735 1 229 1.4E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 8.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 Gene3D G3DSA:3.40.50.720 2 157 4.4E-30 T 29-03-2018 AM474_RS10270 5467c1b77dae7ecb81caae4b1b1ef5ff 229 Gene3D G3DSA:3.40.50.720 158 229 9.0E-10 T 29-03-2018 AM474_RS31250 1262400124d83c1368a3114ef3e0fe1d 399 Gene3D G3DSA:3.40.190.10 143 356 4.0E-30 T 29-03-2018 AM474_RS31250 1262400124d83c1368a3114ef3e0fe1d 399 Pfam PF13379 NMT1-like family 38 279 6.2E-44 T 29-03-2018 AM474_RS31250 1262400124d83c1368a3114ef3e0fe1d 399 SUPERFAMILY SSF53850 42 276 7.29E-35 T 29-03-2018 AM474_RS31250 1262400124d83c1368a3114ef3e0fe1d 399 Gene3D G3DSA:3.40.190.10 37 142 2.6E-12 T 29-03-2018 AM474_RS31250 1262400124d83c1368a3114ef3e0fe1d 399 SUPERFAMILY SSF53213 285 359 5.49E-5 T 29-03-2018 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 5.1E-81 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 37.933 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 SUPERFAMILY SSF51366 1 248 2.07E-92 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 Pfam PF00290 Tryptophan synthase alpha chain 8 263 4.6E-104 T 29-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 Gene3D G3DSA:3.20.20.70 2 268 9.3E-86 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS14680 4724d9a95228f09ddd71c6ae7a79cac1 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 29-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AM474_RS04890 4a0bbaba02a8dfd986aa66cbbdfdf721 215 Gene3D G3DSA:3.20.20.70 8 210 2.1E-32 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04890 4a0bbaba02a8dfd986aa66cbbdfdf721 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 38 47 - T 29-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS04890 4a0bbaba02a8dfd986aa66cbbdfdf721 215 SUPERFAMILY SSF51569 10 208 3.3E-66 T 29-03-2018 AM474_RS04890 4a0bbaba02a8dfd986aa66cbbdfdf721 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 207 1.0E-85 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS04890 4a0bbaba02a8dfd986aa66cbbdfdf721 215 Pfam PF01081 KDPG and KHG aldolase 10 201 1.6E-68 T 29-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 SUPERFAMILY SSF52467 189 356 1.37E-38 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 SUPERFAMILY SSF52518 364 563 1.61E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 7.4E-47 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 328 7.1E-26 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 SUPERFAMILY SSF52518 4 175 7.31E-50 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Gene3D G3DSA:3.40.50.970 1 186 1.1E-47 T 29-03-2018 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Gene3D G3DSA:3.40.50.1220 187 349 1.5E-34 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 5.5E-27 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS29840 090e9bb5149181696b1a038c87a93f5e 590 Gene3D G3DSA:3.40.50.970 350 552 7.3E-41 T 29-03-2018 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 Gene3D G3DSA:1.10.10.10 1 76 4.8E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 SUPERFAMILY SSF53850 87 275 2.02E-24 T 29-03-2018 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 Gene3D G3DSA:3.40.190.10 77 203 2.7E-15 T 29-03-2018 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 Pfam PF03466 LysR substrate binding domain 87 273 1.2E-21 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS28555 16cbf365d5811a6d634e254fd681a7d0 287 SUPERFAMILY SSF46785 1 109 1.27E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31095 ff862c18051adda60fa3be6b22538987 81 SUPERFAMILY SSF54862 9 74 1.47E-14 T 29-03-2018 AM474_RS31095 ff862c18051adda60fa3be6b22538987 81 Gene3D G3DSA:3.30.70.20 46 77 8.5E-5 T 29-03-2018 AM474_RS31095 ff862c18051adda60fa3be6b22538987 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 57 68 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS31095 ff862c18051adda60fa3be6b22538987 81 Pfam PF13187 4Fe-4S dicluster domain 28 71 1.9E-8 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS31095 ff862c18051adda60fa3be6b22538987 81 Gene3D G3DSA:3.30.70.20 1 45 3.4E-8 T 29-03-2018 AM474_RS23010 c2c171b734cf539c65799668ca47610b 137 Pfam PF00472 RF-1 domain 8 132 3.4E-26 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS23010 c2c171b734cf539c65799668ca47610b 137 Gene3D G3DSA:3.30.160.20 1 137 1.8E-41 T 29-03-2018 AM474_RS23010 c2c171b734cf539c65799668ca47610b 137 SUPERFAMILY SSF75620 8 117 5.1E-13 T 29-03-2018 AM474_RS23010 c2c171b734cf539c65799668ca47610b 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 SUPERFAMILY SSF52172 1 184 1.57E-45 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 Gene3D G3DSA:1.10.10.10 141 186 6.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 SMART SM00448 2 113 2.6E-10 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 Pfam PF00072 Response regulator receiver domain 4 110 4.8E-9 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 PIRSF PIRSF036382 1 191 2.0E-66 T 29-03-2018 IPR008327 Signal transduction response regulator, antiterminator AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 Pfam PF03861 ANTAR domain 133 184 1.5E-16 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 Gene3D G3DSA:3.40.50.2300 1 140 6.9E-18 T 29-03-2018 AM474_RS28165 6dc076ee8ead2c86dfef4f876fdecaee 192 SMART SM01012 129 184 2.3E-19 T 29-03-2018 IPR005561 ANTAR domain GO:0003723 AM474_RS10685 adbba1c708011be71b0f3ace26b05637 569 Gene3D G3DSA:3.90.1300.10 1 569 2.2E-119 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS10685 adbba1c708011be71b0f3ace26b05637 569 SUPERFAMILY SSF75304 1 561 4.45E-89 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS10685 adbba1c708011be71b0f3ace26b05637 569 Pfam PF01425 Amidase 25 291 8.1E-45 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS10685 adbba1c708011be71b0f3ace26b05637 569 Pfam PF01425 Amidase 459 544 4.4E-6 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS27730 04db7cfa6c17c045418a8311f03e9ee2 109 SUPERFAMILY SSF48452 2 109 1.54E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS27730 04db7cfa6c17c045418a8311f03e9ee2 109 PIRSF PIRSF017117 1 109 3.2E-40 T 29-03-2018 IPR016684 Type III secretion system chaperone, YscY AM474_RS27730 04db7cfa6c17c045418a8311f03e9ee2 109 Gene3D G3DSA:1.25.40.10 1 109 2.5E-14 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS21285 9f0652c37da236107089333afda01a3f 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 136 8.4E-45 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM474_RS21285 9f0652c37da236107089333afda01a3f 151 SUPERFAMILY SSF89447 2 136 8.27E-44 T 29-03-2018 AM474_RS21285 9f0652c37da236107089333afda01a3f 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 132 5.0E-63 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM474_RS21285 9f0652c37da236107089333afda01a3f 151 Gene3D G3DSA:2.10.260.10 80 129 1.1E-5 T 29-03-2018 AM474_RS21285 9f0652c37da236107089333afda01a3f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 2.0E-16 T 29-03-2018 IPR020603 MraZ domain AM474_RS21285 9f0652c37da236107089333afda01a3f 151 Pfam PF02381 MraZ protein, putative antitoxin-like 78 132 4.4E-15 T 29-03-2018 IPR020603 MraZ domain AM474_RS21285 9f0652c37da236107089333afda01a3f 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 54.967 T 29-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AM474_RS07400 c6038ae8eff90cfc980fcec93f76d070 256 Gene3D G3DSA:1.10.3720.10 5 251 8.6E-44 T 29-03-2018 AM474_RS07400 c6038ae8eff90cfc980fcec93f76d070 256 SUPERFAMILY SSF161098 3 249 1.12E-55 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS07400 c6038ae8eff90cfc980fcec93f76d070 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 245 7.7E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS29450 7c24e9f148beafe4dd5782e799099303 333 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 318 5.7E-103 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter AM474_RS29450 7c24e9f148beafe4dd5782e799099303 333 PIRSF PIRSF026166 1 332 1.3E-142 T 29-03-2018 IPR016833 Putative sodium bile acid cotransporter AM474_RS25605 adef9a9c3627007ed7631b3185878442 174 PIRSF PIRSF029393 1 172 2.7E-82 T 29-03-2018 IPR016917 Uncharacterised conserved protein UCP029393 AM474_RS25605 adef9a9c3627007ed7631b3185878442 174 Pfam PF11157 Protein of unknown function (DUF2937) 2 159 1.7E-62 T 29-03-2018 IPR022584 Protein of unknown function DUF2937 AM474_RS16635 8696036542b264d2ba6f4913a277b62b 662 Gene3D G3DSA:3.40.50.1110 404 653 8.0E-9 T 29-03-2018 AM474_RS16635 8696036542b264d2ba6f4913a277b62b 662 Pfam PF01757 Acyltransferase family 8 326 4.4E-30 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM474_RS16635 8696036542b264d2ba6f4913a277b62b 662 SUPERFAMILY SSF52266 494 650 6.18E-5 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS24030 4b3061eee71e21ae094c15c35a193c08 66 Gene3D G3DSA:3.10.450.50 3 66 4.2E-12 T 29-03-2018 AM474_RS24030 4b3061eee71e21ae094c15c35a193c08 66 Pfam PF02810 SEC-C motif 48 65 2.6E-11 T 29-03-2018 IPR004027 SEC-C motif AM474_RS24030 4b3061eee71e21ae094c15c35a193c08 66 SUPERFAMILY SSF103642 46 65 2.29E-8 T 29-03-2018 AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 SMART SM00382 36 233 1.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 SUPERFAMILY SSF52540 4 227 4.31E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 Pfam PF00005 ABC transporter 27 181 4.7E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 226 2.4E-107 T 29-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06250 3810e3243d07f850309959d8186e5a0e 238 Gene3D G3DSA:3.40.50.300 1 236 4.9E-43 T 29-03-2018 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 204 250 3.6E-12 T 29-03-2018 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 201 249 1.52E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF51182 13 179 7.97E-7 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:1.10.10.60 133 203 4.6E-13 T 29-03-2018 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 Gene3D G3DSA:2.60.120.280 6 132 1.0E-7 T 29-03-2018 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 Pfam PF12833 Helix-turn-helix domain 171 249 6.4E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 SUPERFAMILY SSF46689 151 199 1.12E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22545 ae152afab6898fbf9baddc8946df84f1 250 SMART SM00342 165 248 1.4E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25455 8e0cb211f9d11876860a45efe27883a5 173 PIRSF PIRSF006135 1 171 3.1E-51 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS25455 8e0cb211f9d11876860a45efe27883a5 173 SUPERFAMILY SSF52540 4 169 2.3E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25455 8e0cb211f9d11876860a45efe27883a5 173 Gene3D G3DSA:3.40.50.300 3 169 4.1E-62 T 29-03-2018 AM474_RS25455 8e0cb211f9d11876860a45efe27883a5 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 1.7E-58 T 29-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 AM474_RS13280 bb7661f49cfb4033cb59e34a31900221 292 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 2.1E-147 T 29-03-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 AM474_RS13280 bb7661f49cfb4033cb59e34a31900221 292 SUPERFAMILY SSF56317 3 283 1.31E-83 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS13280 bb7661f49cfb4033cb59e34a31900221 292 Gene3D G3DSA:3.60.110.10 4 282 1.7E-79 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS13280 bb7661f49cfb4033cb59e34a31900221 292 Pfam PF00795 Carbon-nitrogen hydrolase 6 266 4.5E-53 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS30395 f4c1838d8ba41e2ab92895cf05950b44 440 Gene3D G3DSA:1.20.1250.20 10 220 1.7E-28 T 29-03-2018 AM474_RS30395 f4c1838d8ba41e2ab92895cf05950b44 440 Gene3D G3DSA:1.20.1250.20 237 429 1.3E-18 T 29-03-2018 AM474_RS30395 f4c1838d8ba41e2ab92895cf05950b44 440 SUPERFAMILY SSF103473 18 425 6.67E-72 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30395 f4c1838d8ba41e2ab92895cf05950b44 440 Pfam PF07690 Major Facilitator Superfamily 26 390 1.9E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 Gene3D G3DSA:3.30.390.30 333 461 1.0E-34 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 Gene3D G3DSA:3.50.50.60 6 165 1.1E-27 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 9.9E-63 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PIRSF PIRSF000350 2 457 2.2E-78 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 SUPERFAMILY SSF51905 6 336 4.84E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 SUPERFAMILY SSF55424 344 463 7.73E-33 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 464 1.6E-142 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 454 6.3E-30 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 6.7E-36 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 6.7E-36 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 6.7E-36 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 6.7E-36 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.7E-36 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 Gene3D G3DSA:3.40.50.720 166 332 1.4E-35 T 29-03-2018 AM474_RS30860 badba6d12d5c59e305fb1e565cba6d87 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 326 4.2E-68 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 5.1E-18 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF47203 287 475 9.83E-48 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 8.2E-20 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 SUPERFAMILY SSF56645 38 277 7.33E-60 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.10.540.10 11 160 7.8E-21 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 592 1.8E-35 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 2.7E-12 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.2E-11 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:1.20.140.10 296 466 1.8E-39 T 29-03-2018 AM474_RS12165 81a96685202d77a5785adebb221e9e9e 601 Gene3D G3DSA:2.40.110.10 161 274 9.4E-25 T 29-03-2018 AM474_RS23990 55d84c45c734c14ddfab16c60bc93623 158 Gene3D G3DSA:3.10.50.30 75 158 4.7E-14 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS23990 55d84c45c734c14ddfab16c60bc93623 158 SUPERFAMILY SSF54534 85 145 2.35E-6 T 29-03-2018 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SUPERFAMILY SSF55874 590 751 7.07E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Gene3D G3DSA:3.30.450.20 257 389 2.0E-29 T 29-03-2018 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00086 340 383 4.8E-7 T 29-03-2018 IPR001610 PAC motif AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00086 462 504 21.0 T 29-03-2018 IPR001610 PAC motif AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Pfam PF08447 PAS fold 291 376 2.2E-15 T 29-03-2018 IPR013655 PAS fold-3 GO:0005515 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00091 391 457 2.6 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00091 158 220 43.0 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00091 268 334 7.4E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 751 1.7E-14 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Gene3D G3DSA:1.10.287.130 512 595 3.9E-8 T 29-03-2018 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Gene3D G3DSA:3.30.450.20 154 256 0.0023 T 29-03-2018 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Gene3D G3DSA:3.30.450.20 390 511 1.7E-16 T 29-03-2018 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SUPERFAMILY SSF55785 273 386 1.05E-26 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Gene3D G3DSA:3.30.565.10 599 756 1.7E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00387 641 753 3.6E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SMART SM00388 526 599 5.9E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 597 6.9E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SUPERFAMILY SSF47384 522 597 5.89E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 SUPERFAMILY SSF55785 382 502 1.93E-10 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 389 4.2E-22 T 29-03-2018 IPR000014 PAS domain AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 1.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 698 1.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS10835 b48fffa2129cec5123c20c5be843bb0a 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 712 1.1E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27450 5543d5e228d7c4ca33bb947908cf6f50 158 Pfam PF12802 MarR family 37 94 8.7E-11 T 29-03-2018 AM474_RS27450 5543d5e228d7c4ca33bb947908cf6f50 158 Gene3D G3DSA:1.10.10.10 8 128 7.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27450 5543d5e228d7c4ca33bb947908cf6f50 158 SMART SM00347 31 131 9.0E-12 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27450 5543d5e228d7c4ca33bb947908cf6f50 158 SUPERFAMILY SSF46785 6 143 1.08E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 SUPERFAMILY SSF52540 266 498 2.44E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 SUPERFAMILY SSF52540 11 235 1.27E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Gene3D G3DSA:3.40.1710.10 583 735 8.8E-25 T 29-03-2018 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Pfam PF12698 ABC-2 family transporter protein 570 908 1.0E-42 T 29-03-2018 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Pfam PF00005 ABC transporter 291 434 9.2E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Pfam PF00005 ABC transporter 25 171 7.9E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Gene3D G3DSA:3.40.50.300 272 559 2.3E-63 T 29-03-2018 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 Gene3D G3DSA:3.40.50.300 8 269 7.3E-61 T 29-03-2018 AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 SMART SM00382 299 490 8.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 SMART SM00382 33 264 2.7E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16670 c4afa2f92aa86517d3a2c4a6217c3131 916 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 Gene3D G3DSA:1.10.10.10 124 226 5.4E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 SUPERFAMILY SSF52172 1 175 1.36E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 5.7E-103 T 29-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.0E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 Pfam PF00072 Response regulator receiver domain 4 112 3.6E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 Gene3D G3DSA:3.40.50.2300 1 123 8.1E-34 T 29-03-2018 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 SMART SM00862 146 221 2.4E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS02660 f20a3afdb13caf86854e110b32fab366 226 SMART SM00448 1 112 8.3E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12800 dc02cd8b658f0a2163eead4c07cc1383 244 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 243 7.5E-59 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM474_RS12800 dc02cd8b658f0a2163eead4c07cc1383 244 Gene3D G3DSA:3.40.50.150 35 244 1.6E-30 T 29-03-2018 AM474_RS12800 dc02cd8b658f0a2163eead4c07cc1383 244 Pfam PF02390 Putative methyltransferase 69 238 5.0E-55 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM474_RS12800 dc02cd8b658f0a2163eead4c07cc1383 244 SUPERFAMILY SSF53335 22 242 9.36E-41 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS12800 dc02cd8b658f0a2163eead4c07cc1383 244 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 243 29.803 T 29-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AM474_RS08035 3520ad343dafc3a3670a8b47fff97ca9 406 Pfam PF12740 Chlorophyllase enzyme 158 288 1.4E-8 T 29-03-2018 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164 AM474_RS08035 3520ad343dafc3a3670a8b47fff97ca9 406 SUPERFAMILY SSF53474 159 371 7.08E-19 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS08035 3520ad343dafc3a3670a8b47fff97ca9 406 Gene3D G3DSA:3.40.50.1820 153 387 7.0E-17 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS21005 42d1bb480a22453520e400ad54c245d6 1276 Pfam PF13502 AsmA-like C-terminal region 1020 1265 1.4E-50 T 29-03-2018 IPR032712 AsmA-like, C-terminal AM474_RS21005 42d1bb480a22453520e400ad54c245d6 1276 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1275 1.7E-291 T 29-03-2018 IPR011836 Conserved hypothetical protein CHP02099 AM474_RS21005 42d1bb480a22453520e400ad54c245d6 1276 Pfam PF13116 Protein of unknown function 513 799 1.6E-49 T 29-03-2018 IPR025263 Domain of unknown function DUF3971 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 SUPERFAMILY SSF51735 112 267 2.8E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 SUPERFAMILY SSF50129 8 142 2.83E-38 T 29-03-2018 IPR011032 GroES-like AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 SMART SM00829 11 323 1.1E-34 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 29-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 Gene3D G3DSA:3.40.50.720 150 248 4.5E-19 T 29-03-2018 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 Gene3D G3DSA:3.90.180.10 249 324 1.3E-4 T 29-03-2018 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 Gene3D G3DSA:3.90.180.10 1 149 9.2E-47 T 29-03-2018 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 Pfam PF00107 Zinc-binding dehydrogenase 152 278 7.2E-27 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS14745 fb21b25d157c4eeb9ca1dec27e543460 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 9.8E-9 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS01680 d77b16a9ff5911ae55b90e7a61e49f24 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 2 63 6.7E-25 T 29-03-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system AM474_RS01680 d77b16a9ff5911ae55b90e7a61e49f24 73 Gene3D G3DSA:1.10.1220.10 4 34 0.0088 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Gene3D G3DSA:1.10.10.10 7 132 1.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SUPERFAMILY SSF46785 10 206 2.69E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 9.6E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 9.6E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 9.6E-10 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Pfam PF12840 Helix-turn-helix domain 19 75 1.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SUPERFAMILY SSF53335 157 313 1.67E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Gene3D G3DSA:3.40.50.150 133 309 2.9E-34 T 29-03-2018 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 Pfam PF13489 Methyltransferase domain 154 294 1.1E-17 T 29-03-2018 AM474_RS11945 e2fafa5497ccd5cffcf92a5ac7c29c7e 333 SMART SM00418 18 95 6.7E-12 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS32065 3d79c3a9a46a4180d40739e51ac42701 333 Pfam PF00296 Luciferase-like monooxygenase 24 306 6.3E-39 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS32065 3d79c3a9a46a4180d40739e51ac42701 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 328 3.9E-130 T 29-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 AM474_RS32065 3d79c3a9a46a4180d40739e51ac42701 333 Gene3D G3DSA:3.20.20.30 13 330 6.0E-73 T 29-03-2018 AM474_RS32065 3d79c3a9a46a4180d40739e51ac42701 333 SUPERFAMILY SSF51679 7 328 2.88E-85 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS17515 1c487ba5084526922d05365b66a4759c 235 SUPERFAMILY SSF75217 72 234 6.28E-35 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS17515 1c487ba5084526922d05365b66a4759c 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 232 1.4E-21 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS17515 1c487ba5084526922d05365b66a4759c 235 Pfam PF04452 RNA methyltransferase 19 234 8.2E-42 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS17515 1c487ba5084526922d05365b66a4759c 235 Gene3D G3DSA:3.40.1280.10 1 234 7.2E-54 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS17515 1c487ba5084526922d05365b66a4759c 235 PIRSF PIRSF015601 2 235 4.5E-46 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS26590 c4056bedad0335c704f40925b925807d 551 Pfam PF13598 Domain of unknown function (DUF4139) 221 543 2.0E-64 T 29-03-2018 IPR011935 Conserved hypothetical protein CHP02231 AM474_RS26590 c4056bedad0335c704f40925b925807d 551 TIGRFAM TIGR02231 TIGR02231: conserved hypothetical protein 30 547 1.8E-206 T 29-03-2018 IPR011935 Conserved hypothetical protein CHP02231 AM474_RS26590 c4056bedad0335c704f40925b925807d 551 Gene3D G3DSA:1.20.1170.10 60 376 1.7E-5 T 29-03-2018 AM474_RS26590 c4056bedad0335c704f40925b925807d 551 Pfam PF13600 N-terminal domain of unknown function (DUF4140) 34 133 9.9E-23 T 29-03-2018 IPR025554 Domain of unknown function DUF4140 AM474_RS21255 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 53 116 0.019 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM474_RS21255 8aa28c0c74b1e3e9646da0cb6288190b 192 SMART SM00749 130 191 0.093 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM474_RS21255 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 125 190 1.9E-17 T 29-03-2018 IPR007055 BON domain AM474_RS21255 8aa28c0c74b1e3e9646da0cb6288190b 192 Pfam PF04972 BON domain 46 115 8.3E-12 T 29-03-2018 IPR007055 BON domain AM474_RS18910 e877d5206ca44984a72d62dbf0224ff6 359 Gene3D G3DSA:1.10.3470.10 42 357 2.5E-28 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS18910 e877d5206ca44984a72d62dbf0224ff6 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 341 8.7E-42 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS18910 e877d5206ca44984a72d62dbf0224ff6 359 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 44 352 8.3E-134 T 29-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 Gene3D G3DSA:1.20.1600.10 17 475 3.2E-107 T 29-03-2018 AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 469 1.3E-119 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 Pfam PF02321 Outer membrane efflux protein 64 257 2.4E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 Pfam PF02321 Outer membrane efflux protein 286 467 9.1E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 SUPERFAMILY SSF56954 55 472 2.49E-113 T 29-03-2018 AM474_RS03365 62e91100b0197ba33a240fa7357bb145 479 SUPERFAMILY SSF56954 4 29 2.49E-113 T 29-03-2018 AM474_RS26480 304acc37266f879140e84c7d0625ee17 111 Gene3D G3DSA:3.40.1690.10 9 86 2.7E-24 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS26480 304acc37266f879140e84c7d0625ee17 111 SUPERFAMILY SSF160544 10 86 2.88E-19 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS26480 304acc37266f879140e84c7d0625ee17 111 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 81 2.1E-16 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 Gene3D G3DSA:3.40.190.10 172 263 2.4E-15 T 29-03-2018 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 2.7E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 SUPERFAMILY SSF53850 82 285 1.14E-33 T 29-03-2018 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 SUPERFAMILY SSF46785 3 105 6.81E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 Gene3D G3DSA:3.40.190.10 81 171 2.3E-16 T 29-03-2018 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 8.9E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 Gene3D G3DSA:1.10.10.10 1 79 5.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22735 3008ffd30b465fba4d32913059bb7b96 294 Pfam PF03466 LysR substrate binding domain 81 283 1.7E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 184 199 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 199 215 1.3E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 SUPERFAMILY SSF46689 117 166 6.54E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 SUPERFAMILY SSF46689 173 219 9.41E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 Gene3D G3DSA:3.30.450.20 1 110 4.0E-13 T 29-03-2018 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 Pfam PF12833 Helix-turn-helix domain 140 216 1.2E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 Pfam PF08448 PAS fold 4 106 3.5E-19 T 29-03-2018 IPR013656 PAS fold-4 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 170 211 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 SMART SM00342 133 215 8.0E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 Gene3D G3DSA:1.10.10.60 111 170 4.8E-11 T 29-03-2018 AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 SUPERFAMILY SSF55785 4 101 1.19E-11 T 29-03-2018 IPR000014 PAS domain AM474_RS25360 699a633a6115df30a90cdc133cfb81e8 224 Gene3D G3DSA:1.10.10.60 172 224 2.4E-16 T 29-03-2018 AM474_RS15250 f39b2fc03d9319e97053cf254b469b03 167 Pfam PF01475 Ferric uptake regulator family 35 154 1.3E-11 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM474_RS15250 f39b2fc03d9319e97053cf254b469b03 167 Gene3D G3DSA:1.10.10.10 12 106 2.6E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15250 f39b2fc03d9319e97053cf254b469b03 167 SUPERFAMILY SSF46785 29 159 4.25E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26820 c0f171ea2aa19a0806a90745158068c6 527 Gene3D G3DSA:3.50.50.60 11 176 5.4E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26820 c0f171ea2aa19a0806a90745158068c6 527 Gene3D G3DSA:3.50.50.60 177 509 3.1E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26820 c0f171ea2aa19a0806a90745158068c6 527 Pfam PF00743 Flavin-binding monooxygenase-like 27 229 1.7E-12 T 29-03-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AM474_RS26820 c0f171ea2aa19a0806a90745158068c6 527 SUPERFAMILY SSF51905 24 250 2.59E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26820 c0f171ea2aa19a0806a90745158068c6 527 SUPERFAMILY SSF51905 298 500 4.79E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23330 3b5b62938064a6034a4d5a6d2ba72371 642 Pfam PF00884 Sulfatase 256 534 3.5E-29 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS23330 3b5b62938064a6034a4d5a6d2ba72371 642 Pfam PF11893 Domain of unknown function (DUF3413) 76 247 1.2E-18 T 29-03-2018 IPR024588 Inner membrane protein YejM, N-terminal AM474_RS23330 3b5b62938064a6034a4d5a6d2ba72371 642 Gene3D G3DSA:3.40.720.10 247 544 1.5E-35 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS23330 3b5b62938064a6034a4d5a6d2ba72371 642 PIRSF PIRSF004950 1 625 1.0E-206 T 29-03-2018 IPR012159 Inner membrane protein YejM AM474_RS23330 3b5b62938064a6034a4d5a6d2ba72371 642 SUPERFAMILY SSF53649 252 580 5.63E-55 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS15400 5c3f71036f4071192115de69b6607366 379 Pfam PF01139 tRNA-splicing ligase RtcB 29 100 8.0E-9 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS15400 5c3f71036f4071192115de69b6607366 379 Pfam PF01139 tRNA-splicing ligase RtcB 125 372 4.9E-56 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS15400 5c3f71036f4071192115de69b6607366 379 SUPERFAMILY SSF103365 8 372 4.58E-103 T 29-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 AM474_RS15400 5c3f71036f4071192115de69b6607366 379 TIGRFAM TIGR03073 release_rtcB: release factor H-coupled RctB family protein 12 367 1.2E-188 T 29-03-2018 IPR017510 Release factor H-coupled RctB family protein AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 SMART SM00228 114 186 1.5E-5 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 SMART SM00228 211 280 3.2E-8 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 SUPERFAMILY SSF50156 87 186 7.62E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 SUPERFAMILY SSF50156 208 290 1.97E-16 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 Gene3D G3DSA:2.30.42.10 221 307 3.0E-18 T 29-03-2018 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 450 9.9E-123 T 29-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 Pfam PF13180 PDZ domain 227 289 5.0E-10 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 Pfam PF02163 Peptidase family M50 11 437 1.4E-83 T 29-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 AM474_RS07605 c188dbf7a6fc02ac301a9aa5a99ed465 450 Gene3D G3DSA:2.30.42.10 125 220 2.5E-14 T 29-03-2018 AM474_RS03855 2363ca3d6522ce8d9f3c4009ad874293 392 Gene3D G3DSA:1.20.1250.20 194 385 7.0E-18 T 29-03-2018 AM474_RS03855 2363ca3d6522ce8d9f3c4009ad874293 392 SUPERFAMILY SSF103473 4 379 7.32E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS03855 2363ca3d6522ce8d9f3c4009ad874293 392 Gene3D G3DSA:1.20.1250.20 1 186 3.8E-21 T 29-03-2018 AM474_RS03855 2363ca3d6522ce8d9f3c4009ad874293 392 Pfam PF07690 Major Facilitator Superfamily 9 340 4.3E-33 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Gene3D G3DSA:3.40.190.10 1 106 1.5E-44 T 29-03-2018 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 4.9E-51 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 4.9E-51 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 4.9E-51 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 4.9E-51 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 4.9E-51 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Gene3D G3DSA:3.30.160.40 221 304 3.8E-26 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 29-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 1.3E-77 T 29-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 1.5E-23 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 SUPERFAMILY SSF54782 220 309 2.22E-28 T 29-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Gene3D G3DSA:3.40.190.10 107 199 1.1E-37 T 29-03-2018 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 PIRSF PIRSF001438 1 311 3.1E-120 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 2.2E-111 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.37 T 29-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM474_RS16520 61db51a9a1e8e2051f6160dce17fc172 313 SUPERFAMILY SSF53850 4 219 8.19E-84 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 3.5E-21 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.5E-21 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 3.5E-21 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 3.5E-21 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 Pfam PF01494 FAD binding domain 299 362 1.3E-9 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 Pfam PF01494 FAD binding domain 6 176 1.9E-12 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 SUPERFAMILY SSF54373 185 293 2.47E-31 T 29-03-2018 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 Gene3D G3DSA:3.50.50.60 5 370 3.8E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 SUPERFAMILY SSF51905 289 366 1.47E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10940 6b70422c92e1e51bbde6546c7805a17e 402 SUPERFAMILY SSF51905 5 178 1.47E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03530 0b1b8108faf0d78debbec1fc9ff32631 162 SUPERFAMILY SSF56524 41 161 3.4E-18 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS03530 0b1b8108faf0d78debbec1fc9ff32631 162 Gene3D G3DSA:3.90.420.10 27 162 8.4E-23 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 SUPERFAMILY SSF52777 191 434 1.22E-36 T 29-03-2018 AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 Gene3D G3DSA:3.30.559.10 213 367 1.2E-4 T 29-03-2018 AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 SUPERFAMILY SSF52777 7 157 3.71E-22 T 29-03-2018 AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 Gene3D G3DSA:3.30.559.10 3 187 1.2E-19 T 29-03-2018 AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 Pfam PF00668 Condensation domain 19 145 4.5E-9 T 29-03-2018 IPR001242 Condensation domain AM474_RS05980 7b24d7686f62cfd3b95d0a32ce976a5b 442 Pfam PF00668 Condensation domain 220 325 2.0E-5 T 29-03-2018 IPR001242 Condensation domain AM474_RS07825 fa7e2f3763e32e1ce5bfe106d40992bf 173 SMART SM00506 3 132 6.0E-50 T 29-03-2018 IPR002589 Macro domain AM474_RS07825 fa7e2f3763e32e1ce5bfe106d40992bf 173 SUPERFAMILY SSF52949 3 167 1.26E-62 T 29-03-2018 AM474_RS07825 fa7e2f3763e32e1ce5bfe106d40992bf 173 Gene3D G3DSA:3.40.220.10 1 169 4.9E-70 T 29-03-2018 AM474_RS07825 fa7e2f3763e32e1ce5bfe106d40992bf 173 Pfam PF01661 Macro domain 20 132 2.4E-43 T 29-03-2018 IPR002589 Macro domain AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 Pfam PF03958 Bacterial type II/III secretion system short domain 339 482 2.0E-11 T 29-03-2018 IPR005644 NolW-like AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 Pfam PF03958 Bacterial type II/III secretion system short domain 263 332 3.3E-12 T 29-03-2018 IPR005644 NolW-like AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 Pfam PF03958 Bacterial type II/III secretion system short domain 199 259 1.9E-10 T 29-03-2018 IPR005644 NolW-like AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 Pfam PF00263 Bacterial type II and III secretion system protein 566 732 5.0E-49 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 104 741 8.0E-199 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 719 733 1.2E-26 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 696 714 1.2E-26 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 1.2E-26 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 597 607 1.2E-26 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS22120 b4b7e853f0069a17fd03f4f776d97a62 803 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 586 1.2E-26 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS09955 ba1b98a8347c8dcbc075e71305d7f6ac 213 Gene3D G3DSA:3.40.50.720 1 213 2.0E-19 T 29-03-2018 AM474_RS09955 ba1b98a8347c8dcbc075e71305d7f6ac 213 SUPERFAMILY SSF51735 5 199 3.41E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS09955 ba1b98a8347c8dcbc075e71305d7f6ac 213 Pfam PF08732 HIM1 57 156 3.1E-7 T 29-03-2018 IPR014843 Protein Him1/Fmp52 AM474_RS31865 73f488fcbf2e77ba6fa6c39626bf0d33 73 Gene3D G3DSA:2.30.30.100 22 72 1.4E-22 T 29-03-2018 AM474_RS31865 73f488fcbf2e77ba6fa6c39626bf0d33 73 SUPERFAMILY SSF50182 22 72 2.62E-14 T 29-03-2018 IPR010920 LSM domain AM474_RS31865 73f488fcbf2e77ba6fa6c39626bf0d33 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 71 8.5E-19 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:1.20.58.310 55 157 3.3E-35 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF143724 156 361 1.8E-61 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 PIRSF PIRSF015589 23 734 6.9E-288 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.1840.10 158 354 2.3E-60 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF02503 Polyphosphate kinase middle domain 169 369 2.0E-63 T 29-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF56024 548 727 1.32E-73 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.870.10 548 732 2.2E-41 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 53 726 4.6E-288 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF140356 50 154 9.16E-37 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF13090 Polyphosphate kinase C-terminal domain 379 725 2.8E-153 T 29-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Pfam PF13089 Polyphosphate kinase N-terminal domain 53 158 2.0E-35 T 29-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 SUPERFAMILY SSF56024 362 544 1.54E-56 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Gene3D G3DSA:3.30.870.10 367 547 2.5E-21 T 29-03-2018 AM474_RS16615 b911fbd4e383ef1ed5ab26f74bd6ef05 736 Hamap MF_00347 Polyphosphate kinase [ppk]. 51 730 29.658 T 29-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AM474_RS26520 327b7cf53491387287d7ed280d7ac94c 180 Gene3D G3DSA:3.40.30.10 28 173 1.4E-28 T 29-03-2018 AM474_RS26520 327b7cf53491387287d7ed280d7ac94c 180 Pfam PF08534 Redoxin 37 160 1.6E-20 T 29-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AM474_RS26520 327b7cf53491387287d7ed280d7ac94c 180 SUPERFAMILY SSF52833 41 173 5.27E-38 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS26520 327b7cf53491387287d7ed280d7ac94c 180 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS26520 327b7cf53491387287d7ed280d7ac94c 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 171 6.1E-57 T 29-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 SUPERFAMILY SSF46557 13 85 1.26E-24 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 52.946 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 PIRSF PIRSF006092 9 166 9.7E-48 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 29-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 SUPERFAMILY SSF54534 89 164 1.57E-22 T 29-03-2018 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Gene3D G3DSA:3.10.50.30 85 165 6.1E-25 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 28.719 T 29-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 9.8E-25 T 29-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 165 5.3E-85 T 29-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Gene3D G3DSA:1.10.287.180 12 84 2.5E-27 T 29-03-2018 AM474_RS03480 adb0da690e71f44b5e2c17a0c4500663 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 164 5.2E-24 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 SUPERFAMILY SSF46785 6 90 3.63E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 SUPERFAMILY SSF53850 87 297 2.35E-31 T 29-03-2018 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.5E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 1.5E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 Gene3D G3DSA:1.10.10.10 5 91 2.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 Pfam PF03466 LysR substrate binding domain 93 293 2.5E-26 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 Gene3D G3DSA:3.40.190.10 180 263 1.2E-8 T 29-03-2018 AM474_RS22565 50abbd2e256e57b613d6f12e81de46a1 309 Gene3D G3DSA:3.40.190.10 94 179 1.6E-12 T 29-03-2018 AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 48 605 2.8E-157 T 29-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 579 5.2E-38 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 598 5.2E-38 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 460 470 5.2E-38 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 352 362 5.2E-38 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 PRINTS PR00811 Bacterial general secretion pathway protein D signature 425 449 5.2E-38 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 Pfam PF00263 Bacterial type II and III secretion system protein 429 597 9.3E-52 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 Pfam PF03958 Bacterial type II/III secretion system short domain 206 271 3.3E-10 T 29-03-2018 IPR005644 NolW-like AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 Pfam PF03958 Bacterial type II/III secretion system short domain 141 200 2.0E-8 T 29-03-2018 IPR005644 NolW-like AM474_RS28640 c682daf24581f03f10f7387d7df641a9 776 Pfam PF03958 Bacterial type II/III secretion system short domain 277 352 7.5E-14 T 29-03-2018 IPR005644 NolW-like AM474_RS30010 e0d094ef6894ee47fc184dff0f053f11 178 Pfam PF00072 Response regulator receiver domain 58 165 8.8E-5 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS30010 e0d094ef6894ee47fc184dff0f053f11 178 Gene3D G3DSA:3.40.50.2300 49 173 8.3E-9 T 29-03-2018 AM474_RS30010 e0d094ef6894ee47fc184dff0f053f11 178 SUPERFAMILY SSF52172 56 170 3.98E-12 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Gene3D G3DSA:3.30.420.110 132 262 3.8E-28 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Gene3D G3DSA:1.10.1420.10 407 534 6.7E-32 T 29-03-2018 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Gene3D G3DSA:3.40.50.300 566 818 1.2E-41 T 29-03-2018 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SUPERFAMILY SSF53150 114 266 9.16E-44 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Pfam PF05190 MutS family domain IV 427 517 2.6E-29 T 29-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SUPERFAMILY SSF55271 3 115 6.28E-43 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Pfam PF00488 MutS domain V 609 795 4.9E-85 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SMART SM00534 606 792 1.4E-121 T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Gene3D G3DSA:1.10.1420.10 263 406 1.9E-34 T 29-03-2018 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SUPERFAMILY SSF48334 267 564 7.06E-85 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Pfam PF01624 MutS domain I 8 119 1.6E-42 T 29-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 29-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Pfam PF05192 MutS domain III 270 558 2.9E-38 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 847 25.303 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Gene3D G3DSA:3.40.1170.10 1 131 3.9E-47 T 29-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 PIRSF PIRSF037677 200 833 8.6E-124 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 PIRSF PIRSF037677 2 180 3.3E-27 T 29-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SMART SM00533 283 590 6.2E-109 T 29-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 852 0.0 T 29-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 SUPERFAMILY SSF52540 568 795 9.11E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07460 681122e2ae2a73e53ce4de68b17c98d1 855 Pfam PF05188 MutS domain II 128 253 4.3E-31 T 29-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 PIRSF PIRSF006169 1 75 2.0E-29 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 69 24.212 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 SUPERFAMILY SSF118001 1 74 3.79E-26 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 63 3.0E-30 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 2.9E-25 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS06720 a179578addc1280a43e92590a28eb4ab 76 Gene3D G3DSA:1.10.10.610 1 70 4.8E-31 T 29-03-2018 IPR010648 Uncharacterised protein family UPF0270 AM474_RS25135 6916ca97e5ff9d37f6bd25f1aaa472f8 282 Gene3D G3DSA:3.90.1200.10 91 256 2.3E-7 T 29-03-2018 AM474_RS25135 6916ca97e5ff9d37f6bd25f1aaa472f8 282 PIRSF PIRSF000707 7 277 7.3E-10 T 29-03-2018 IPR016259 Hygromycin-B kinase KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 AM474_RS25135 6916ca97e5ff9d37f6bd25f1aaa472f8 282 Pfam PF01636 Phosphotransferase enzyme family 15 242 2.8E-25 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS25135 6916ca97e5ff9d37f6bd25f1aaa472f8 282 Gene3D G3DSA:3.30.200.20 11 89 5.7E-5 T 29-03-2018 AM474_RS25135 6916ca97e5ff9d37f6bd25f1aaa472f8 282 SUPERFAMILY SSF56112 14 241 5.92E-19 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS31650 34c910016801ae359358637fc4f4c359 72 SMART SM00923 3 53 6.0E-27 T 29-03-2018 IPR005153 MbtH-like protein AM474_RS31650 34c910016801ae359358637fc4f4c359 72 Pfam PF03621 MbtH-like protein 1 53 6.9E-25 T 29-03-2018 IPR005153 MbtH-like protein AM474_RS31650 34c910016801ae359358637fc4f4c359 72 SUPERFAMILY SSF160582 1 69 2.48E-30 T 29-03-2018 AM474_RS31650 34c910016801ae359358637fc4f4c359 72 Gene3D G3DSA:3.90.820.10 2 68 1.3E-35 T 29-03-2018 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF47384 241 319 2.75E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF103190 79 179 4.32E-12 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:3.30.450.20 28 177 1.1E-31 T 29-03-2018 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 465 1.7E-10 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:1.10.287.130 236 314 8.1E-12 T 29-03-2018 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SUPERFAMILY SSF55874 310 473 9.95E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Pfam PF00672 HAMP domain 205 251 2.0E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SMART SM00388 255 320 3.4E-16 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SMART SM00304 204 255 3.5E-5 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Gene3D G3DSA:3.30.565.10 315 474 3.2E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 SMART SM00387 365 474 2.7E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS12370 79ae3f9407b854487fac42297a34cba5 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 2.2E-13 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 SUPERFAMILY SSF55469 100 119 1.1E-7 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 SUPERFAMILY SSF55469 154 245 1.1E-7 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 Gene3D G3DSA:3.40.109.10 5 244 8.8E-24 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 SUPERFAMILY SSF55469 416 515 1.26E-7 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 Pfam PF00881 Nitroreductase family 100 229 1.8E-5 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS09470 165847d8590e5d5a6b724a608160dfc2 531 Gene3D G3DSA:3.40.109.10 306 531 5.3E-23 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS01390 77caa54ae61f5f9bb92c5f143ff1d134 281 SMART SM00382 25 183 7.9E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS01390 77caa54ae61f5f9bb92c5f143ff1d134 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 1.1E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS01390 77caa54ae61f5f9bb92c5f143ff1d134 281 SUPERFAMILY SSF52540 8 249 2.29E-37 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01390 77caa54ae61f5f9bb92c5f143ff1d134 281 Gene3D G3DSA:3.40.50.300 4 213 1.4E-33 T 29-03-2018 AM474_RS27070 1a7e41dde6071936e374bb0ce79d4d65 202 Pfam PF01852 START domain 23 198 4.9E-15 T 29-03-2018 IPR002913 START domain GO:0008289 AM474_RS27070 1a7e41dde6071936e374bb0ce79d4d65 202 Gene3D G3DSA:3.30.530.20 22 202 1.7E-31 T 29-03-2018 IPR023393 START-like domain AM474_RS27070 1a7e41dde6071936e374bb0ce79d4d65 202 PIRSF PIRSF039033 1 202 3.3E-82 T 29-03-2018 IPR028347 START domain-containing protein AM474_RS27070 1a7e41dde6071936e374bb0ce79d4d65 202 SUPERFAMILY SSF55961 22 201 5.5E-39 T 29-03-2018 AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 Pfam PF11741 AMIN domain 32 129 5.7E-18 T 29-03-2018 IPR021731 AMIN domain AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 SMART SM00646 217 375 1.2E-66 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 Gene3D G3DSA:3.40.630.40 152 383 9.3E-53 T 29-03-2018 AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 SUPERFAMILY SSF53187 302 379 1.35E-51 T 29-03-2018 AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 SUPERFAMILY SSF53187 155 251 1.35E-51 T 29-03-2018 AM474_RS15050 86dbde10d0b39c53a193a2df1f8b6270 397 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 157 375 1.6E-45 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 27 446 1.1E-171 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 444 1.5E-194 T 29-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 SMART SM00382 167 350 6.9E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 Gene3D G3DSA:3.40.50.300 50 366 5.0E-83 T 29-03-2018 AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 SUPERFAMILY SSF52540 103 372 2.08E-96 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24425 3e274bebeef7fe230f9844fbea2dc6cd 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 366 6.3E-74 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS04670 9ee67f4f76a884f1a4f9dde0523f5471 299 SUPERFAMILY SSF53686 8 294 1.46E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS04670 9ee67f4f76a884f1a4f9dde0523f5471 299 Gene3D G3DSA:3.40.50.1100 129 295 2.3E-10 T 29-03-2018 AM474_RS04670 9ee67f4f76a884f1a4f9dde0523f5471 299 Gene3D G3DSA:3.40.50.1100 31 128 2.3E-18 T 29-03-2018 AM474_RS04670 9ee67f4f76a884f1a4f9dde0523f5471 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 283 6.4E-14 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS04670 9ee67f4f76a884f1a4f9dde0523f5471 299 PIRSF PIRSF006278 1 298 4.7E-71 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.920 204 334 7.5E-38 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02780 Transketolase, C-terminal domain 203 325 7.1E-44 T 29-03-2018 IPR033248 Transketolase, C-terminal domain AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52518 3 213 6.87E-64 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 SUPERFAMILY SSF52922 198 333 6.02E-42 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 Gene3D G3DSA:3.40.50.970 1 203 1.1E-67 T 29-03-2018 AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 Pfam PF02779 Transketolase, pyrimidine binding domain 4 189 5.6E-56 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS10630 7650e036f9f5caf0eb2cc32f3f388a5c 339 SMART SM00861 5 189 1.5E-58 T 29-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM474_RS06660 d33c5f853a98c19a2c517e2e710215af 523 SUPERFAMILY SSF51905 24 354 7.29E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06660 d33c5f853a98c19a2c517e2e710215af 523 Gene3D G3DSA:3.50.50.60 19 472 4.7E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS06660 d33c5f853a98c19a2c517e2e710215af 523 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 27 511 2.0E-217 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS06660 d33c5f853a98c19a2c517e2e710215af 523 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 27 514 3.8E-243 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS06660 d33c5f853a98c19a2c517e2e710215af 523 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 23 514 54.997 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS30645 6d9e6baeab9b6576213547fb700dbce3 333 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 118 2.9E-25 T 29-03-2018 IPR021104 KfrA, N-terminal DNA-binding domain AM474_RS30645 6d9e6baeab9b6576213547fb700dbce3 333 Gene3D G3DSA:1.20.5.340 36 195 0.051 T 29-03-2018 AM474_RS30645 6d9e6baeab9b6576213547fb700dbce3 333 Gene3D G3DSA:1.20.5.340 196 321 0.1 T 29-03-2018 AM474_RS30780 c726372d37a93bcedc09de8f421ef076 256 Gene3D G3DSA:3.30.1950.10 52 124 9.3E-15 T 29-03-2018 AM474_RS30780 c726372d37a93bcedc09de8f421ef076 256 Gene3D G3DSA:3.10.560.10 125 220 6.0E-17 T 29-03-2018 AM474_RS30780 c726372d37a93bcedc09de8f421ef076 256 Pfam PF02563 Polysaccharide biosynthesis/export protein 49 129 5.7E-14 T 29-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 1.2E-24 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 Gene3D G3DSA:1.20.140.10 225 380 1.0E-15 T 29-03-2018 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 Gene3D G3DSA:2.40.110.10 128 224 1.4E-30 T 29-03-2018 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 SUPERFAMILY SSF56645 12 246 1.7E-66 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.3E-22 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 Gene3D G3DSA:1.10.540.10 5 126 4.5E-27 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS00285 3c3bc13038d6be943a5e43821789e9fa 382 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS09430 fccef605e1c43b25306483fbc86e9d84 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 270 1.5E-66 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS09430 fccef605e1c43b25306483fbc86e9d84 277 Gene3D G3DSA:3.60.130.10 1 277 2.5E-77 T 29-03-2018 AM474_RS09430 fccef605e1c43b25306483fbc86e9d84 277 SUPERFAMILY SSF51197 3 277 5.49E-95 T 29-03-2018 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 TIGRFAM TIGR00492 alr: alanine racemase 3 354 8.4E-108 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 265 280 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 338 351 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 120 132 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 248 263 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 154 165 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 191 218 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 60 78 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 286 303 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 PRINTS PR00992 Alanine racemase signature 25 41 2.2E-62 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 29-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 1.9E-71 T 29-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 SUPERFAMILY SSF50621 228 355 1.43E-43 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 5.2E-40 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 Hamap MF_01201 Alanine racemase. 1 355 35.157 T 29-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 SUPERFAMILY SSF51419 8 233 4.58E-73 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 SMART SM01005 232 355 2.6E-64 T 29-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 Gene3D G3DSA:3.20.20.10 1 216 1.5E-47 T 29-03-2018 IPR029066 PLP-binding barrel AM474_RS16300 1da503a9f5d5a501ae39f052505c19e5 357 Gene3D G3DSA:2.40.37.10 217 357 3.2E-51 T 29-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AM474_RS25005 2a314fb65f29913aad21cadddd68e122 315 PIRSF PIRSF006232 19 300 5.6E-81 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM474_RS25005 2a314fb65f29913aad21cadddd68e122 315 Pfam PF05726 Pirin C-terminal cupin domain 191 288 3.4E-23 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM474_RS25005 2a314fb65f29913aad21cadddd68e122 315 SUPERFAMILY SSF51182 25 297 9.84E-70 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25005 2a314fb65f29913aad21cadddd68e122 315 Pfam PF02678 Pirin 40 139 1.8E-30 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM474_RS25005 2a314fb65f29913aad21cadddd68e122 315 Gene3D G3DSA:2.60.120.10 18 264 1.8E-62 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 Gene3D G3DSA:1.20.1050.10 178 316 7.3E-44 T 29-03-2018 AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 SUPERFAMILY SSF47616 172 314 9.61E-37 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 52 147 1.3E-21 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 SUPERFAMILY SSF52833 35 151 2.24E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 PIRSF PIRSF015753 3 313 3.9E-130 T 29-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 Gene3D G3DSA:3.40.30.10 26 177 1.4E-31 T 29-03-2018 AM474_RS00890 bbbf810defb2dc114d49327c4b0848c0 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 193 264 1.3E-13 T 29-03-2018 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 Gene3D G3DSA:3.90.1030.10 1 117 2.8E-48 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.518 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 Pfam PF01196 Ribosomal protein L17 20 116 2.6E-33 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.1E-45 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 SUPERFAMILY SSF64263 1 119 5.1E-50 T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS11040 ac0d1b6be9719a22e63bd4a16ba0b937 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 29-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS10220 4bc77384675cf0a67f1b5bbf8a50fd8e 294 Gene3D G3DSA:3.40.50.720 39 294 7.8E-20 T 29-03-2018 AM474_RS10220 4bc77384675cf0a67f1b5bbf8a50fd8e 294 Pfam PF04321 RmlD substrate binding domain 3 290 2.1E-79 T 29-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AM474_RS10220 4bc77384675cf0a67f1b5bbf8a50fd8e 294 SUPERFAMILY SSF51735 3 291 2.63E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07450 4d12afb4e5c9d8ee38d65b1bc44c8f29 335 Gene3D G3DSA:2.140.10.30 157 316 3.4E-5 T 29-03-2018 AM474_RS07450 4d12afb4e5c9d8ee38d65b1bc44c8f29 335 Gene3D G3DSA:2.140.10.30 17 156 3.2E-12 T 29-03-2018 AM474_RS07450 4d12afb4e5c9d8ee38d65b1bc44c8f29 335 SUPERFAMILY SSF69304 45 313 1.1E-17 T 29-03-2018 AM474_RS07450 4d12afb4e5c9d8ee38d65b1bc44c8f29 335 Pfam PF07676 WD40-like Beta Propeller Repeat 91 111 0.014 T 29-03-2018 IPR011659 WD40-like Beta Propeller AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 Gene3D G3DSA:1.20.58.100 424 516 4.0E-21 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 SUPERFAMILY SSF46977 425 552 3.4E-38 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.7E-10 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.7E-10 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.8E-6 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.8E-6 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 541 8.6E-14 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 Gene3D G3DSA:4.10.80.40 517 559 2.9E-4 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 PIRSF PIRSF000171 1 561 1.3E-233 T 29-03-2018 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 Gene3D G3DSA:3.50.50.60 1 423 4.5E-55 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 SUPERFAMILY SSF51905 4 260 1.33E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 SUPERFAMILY SSF51905 356 407 1.33E-61 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31100 df635cff75dd99fea106cb5b33d2a3af 574 Pfam PF00890 FAD binding domain 9 378 2.1E-37 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS15710 fa5b7992cb40c78b49506dbcb864e605 346 SUPERFAMILY SSF53383 7 341 1.9E-102 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS15710 fa5b7992cb40c78b49506dbcb864e605 346 Pfam PF01212 Beta-eliminating lyase 7 297 1.2E-79 T 29-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AM474_RS15710 fa5b7992cb40c78b49506dbcb864e605 346 Gene3D G3DSA:3.40.640.10 17 250 6.9E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15710 fa5b7992cb40c78b49506dbcb864e605 346 PIRSF PIRSF038940 5 346 6.0E-138 T 29-03-2018 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 AM474_RS15710 fa5b7992cb40c78b49506dbcb864e605 346 Gene3D G3DSA:3.90.1150.10 251 346 9.6E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 SUPERFAMILY SSF46689 3 80 3.13E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 Gene3D G3DSA:1.10.357.10 63 201 5.0E-25 T 29-03-2018 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 SUPERFAMILY SSF48498 76 199 1.68E-33 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.1E-8 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 Gene3D G3DSA:1.10.10.60 2 62 7.9E-16 T 29-03-2018 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.0E-14 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS28615 07ea34bc6beeb7ee92d82a326d66cd3d 216 Pfam PF08362 YcdC-like protein, C-terminal region 59 199 2.5E-51 T 29-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 SUPERFAMILY SSF102712 1 139 1.44E-24 T 29-03-2018 AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 Pfam PF00877 NlpC/P60 family 119 250 1.1E-19 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 SUPERFAMILY SSF54001 113 253 2.84E-14 T 29-03-2018 AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 Gene3D G3DSA:3.90.1720.10 104 256 1.2E-11 T 29-03-2018 AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 Pfam PF14464 Prokaryotic homologs of the JAB domain 5 100 1.4E-18 T 29-03-2018 IPR028090 JAB domain, prokaryotic AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 Gene3D G3DSA:3.40.140.10 1 103 1.2E-15 T 29-03-2018 AM474_RS11430 646bbe241d576c9dac9dbe7383b429f8 256 SMART SM00232 1 127 3.7E-4 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 Gene3D G3DSA:3.60.10.10 455 768 3.0E-32 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 SUPERFAMILY SSF56219 453 769 1.58E-36 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 Gene3D G3DSA:2.60.40.1260 19 130 7.6E-10 T 29-03-2018 IPR001322 Lamin Tail Domain AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 458 761 7.3E-9 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 Pfam PF00932 Lamin Tail Domain 20 129 8.6E-16 T 29-03-2018 IPR001322 Lamin Tail Domain AM474_RS09275 796b4dcf1113cc7b851925358f2738ef 780 Gene3D G3DSA:2.40.50.200 186 299 7.3E-6 T 29-03-2018 AM474_RS18005 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Gene3D G3DSA:1.20.1250.20 40 232 4.7E-35 T 29-03-2018 AM474_RS18005 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Pfam PF07690 Major Facilitator Superfamily 52 360 2.0E-39 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS18005 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 102 118 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS18005 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 Gene3D G3DSA:1.20.1250.20 242 438 2.7E-18 T 29-03-2018 AM474_RS18005 e762ba4c1fcce3fb42abd5b4c9e0f49f 438 SUPERFAMILY SSF103473 40 424 1.31E-67 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30385 7e8c2f834212bc0e74c3146bd2e840a7 337 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 333 33.222 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM474_RS30385 7e8c2f834212bc0e74c3146bd2e840a7 337 SUPERFAMILY SSF53659 7 334 3.18E-91 T 29-03-2018 AM474_RS30385 7e8c2f834212bc0e74c3146bd2e840a7 337 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 38 329 1.3E-81 T 29-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 AM474_RS30385 7e8c2f834212bc0e74c3146bd2e840a7 337 Gene3D G3DSA:3.40.718.10 1 337 2.4E-104 T 29-03-2018 AM474_RS30770 29fea724599e4a76eff44b6892957405 488 Gene3D G3DSA:2.60.120.10 348 459 3.6E-26 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS30770 29fea724599e4a76eff44b6892957405 488 SUPERFAMILY SSF53448 8 292 1.1E-67 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS30770 29fea724599e4a76eff44b6892957405 488 Pfam PF01050 Mannose-6-phosphate isomerase 325 475 1.1E-63 T 29-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS30770 29fea724599e4a76eff44b6892957405 488 SUPERFAMILY SSF51182 191 480 3.09E-79 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS30770 29fea724599e4a76eff44b6892957405 488 Gene3D G3DSA:3.90.550.10 6 347 1.0E-84 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS30770 29fea724599e4a76eff44b6892957405 488 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 7 479 8.6E-174 T 29-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS30770 29fea724599e4a76eff44b6892957405 488 Pfam PF00483 Nucleotidyl transferase 9 296 4.4E-60 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS22570 a3153cf4031a6a1a649bec200d9efa8b 212 Gene3D G3DSA:3.40.50.360 1 212 7.7E-41 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS22570 a3153cf4031a6a1a649bec200d9efa8b 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 209 29.369 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM474_RS22570 a3153cf4031a6a1a649bec200d9efa8b 212 Pfam PF02525 Flavodoxin-like fold 3 207 1.1E-44 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS22570 a3153cf4031a6a1a649bec200d9efa8b 212 SUPERFAMILY SSF52218 1 210 2.97E-49 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Gene3D G3DSA:3.50.50.60 6 349 8.9E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 SUPERFAMILY SSF51905 268 371 5.18E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 SUPERFAMILY SSF51905 6 172 5.18E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 Pfam PF01494 FAD binding domain 7 343 2.3E-24 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 3.3E-15 T 29-03-2018 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 3.3E-15 T 29-03-2018 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.3E-15 T 29-03-2018 AM474_RS05975 6a9eaf0f3a073a6c6fbe9f4a4ab60e39 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 3.3E-15 T 29-03-2018 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 Gene3D G3DSA:1.10.10.10 137 219 2.1E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00421 156 213 8.2E-28 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF52172 11 143 4.55E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 Gene3D G3DSA:3.40.50.2300 11 136 1.4E-37 T 29-03-2018 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 SUPERFAMILY SSF46894 146 218 1.84E-22 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.4E-21 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.1E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 SMART SM00448 12 125 3.8E-34 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS09110 a2052e4cde379f185910616fa5c80dd8 219 Pfam PF00072 Response regulator receiver domain 15 126 8.1E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 317 344 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 366 375 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 169 184 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 300 311 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 375 386 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 106 117 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 PRINTS PR00359 B-class P450 signature 345 360 5.7E-27 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 Gene3D G3DSA:1.10.630.10 14 426 3.3E-61 T 29-03-2018 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 SUPERFAMILY SSF48264 59 425 9.56E-77 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 Pfam PF00067 Cytochrome P450 59 396 3.2E-28 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00480 08d3c1654a7dc35997f7900c6ffae89f 426 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 368 377 - T 29-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AM474_RS11965 677f636c7320767d19d287ddf5e9b7f0 322 Gene3D G3DSA:3.40.50.1820 47 320 9.0E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11965 677f636c7320767d19d287ddf5e9b7f0 322 Pfam PF10503 Esterase PHB depolymerase 55 181 2.2E-16 T 29-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AM474_RS11965 677f636c7320767d19d287ddf5e9b7f0 322 SUPERFAMILY SSF53474 46 218 2.28E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11965 677f636c7320767d19d287ddf5e9b7f0 322 SUPERFAMILY SSF53474 263 297 2.28E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS30805 6a1a1c42ef866cc4c0f1730b1258d268 367 Gene3D G3DSA:3.40.50.2000 9 191 1.6E-5 T 29-03-2018 AM474_RS30805 6a1a1c42ef866cc4c0f1730b1258d268 367 Pfam PF00534 Glycosyl transferases group 1 199 302 8.6E-11 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS30805 6a1a1c42ef866cc4c0f1730b1258d268 367 Gene3D G3DSA:3.40.50.2000 192 365 2.0E-22 T 29-03-2018 AM474_RS30805 6a1a1c42ef866cc4c0f1730b1258d268 367 Pfam PF13439 Glycosyltransferase Family 4 17 183 1.5E-9 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS30805 6a1a1c42ef866cc4c0f1730b1258d268 367 SUPERFAMILY SSF53756 13 366 2.2E-43 T 29-03-2018 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 SUPERFAMILY SSF51182 10 179 1.21E-20 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 Gene3D G3DSA:1.10.10.60 209 257 5.1E-10 T 29-03-2018 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 248 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 SUPERFAMILY SSF46689 211 254 5.82E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 Pfam PF12833 Helix-turn-helix domain 176 252 2.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 Gene3D G3DSA:1.10.10.60 84 208 3.1E-6 T 29-03-2018 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 Pfam PF02311 AraC-like ligand binding domain 25 118 1.8E-8 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 9.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 9.2E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 SMART SM00342 170 252 3.2E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS22610 04bd596765f37f933fa100ba28484d21 262 Gene3D G3DSA:2.60.120.10 4 83 9.5E-9 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 SMART SM00342 243 325 6.4E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 Gene3D G3DSA:1.10.10.60 202 280 0.038 T 29-03-2018 AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 SUPERFAMILY SSF46689 278 328 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 Gene3D G3DSA:1.10.10.60 281 332 2.0E-13 T 29-03-2018 AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12833 Helix-turn-helix domain 249 327 1.6E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS19290 2bf409278229b3150d341ddf99c95b7a 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 199 7.7E-41 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS02980 de02b176f087f119daf2dfaef6d519ba 604 Gene3D G3DSA:3.40.50.300 303 602 6.3E-32 T 29-03-2018 AM474_RS02980 de02b176f087f119daf2dfaef6d519ba 604 Gene3D G3DSA:3.40.50.300 22 279 2.8E-36 T 29-03-2018 AM474_RS02980 de02b176f087f119daf2dfaef6d519ba 604 Pfam PF13361 UvrD-like helicase C-terminal domain 487 574 4.2E-19 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS02980 de02b176f087f119daf2dfaef6d519ba 604 Pfam PF13245 AAA domain 27 261 3.6E-23 T 29-03-2018 AM474_RS02980 de02b176f087f119daf2dfaef6d519ba 604 SUPERFAMILY SSF52540 20 595 2.1E-84 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 Gene3D G3DSA:3.40.50.300 1 257 1.9E-70 T 29-03-2018 AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 SUPERFAMILY SSF54631 253 367 5.07E-20 T 29-03-2018 AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 SMART SM00116 262 310 1.6E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 SMART SM00116 321 367 3.2 T 29-03-2018 IPR000644 CBS domain AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 Pfam PF00005 ABC transporter 23 168 5.3E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 Pfam PF00571 CBS domain 321 367 0.0068 T 29-03-2018 IPR000644 CBS domain AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 Pfam PF00571 CBS domain 260 307 1.4E-8 T 29-03-2018 IPR000644 CBS domain AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 SMART SM00382 31 226 2.5E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 SUPERFAMILY SSF52540 1 245 2.26E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 9.0E-105 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM474_RS09180 f6ebc6e034628a99eaf2953d92571630 387 Gene3D G3DSA:3.10.580.10 258 371 4.6E-18 T 29-03-2018 AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 29-03-2018 IPR030390 RNA methyltransferase TrmA, active site AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 SUPERFAMILY SSF53335 86 448 6.15E-77 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 29-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 276 447 4.6E-24 T 29-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 28 450 66.604 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 Gene3D G3DSA:3.40.50.150 93 448 2.6E-56 T 29-03-2018 AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 SUPERFAMILY SSF50249 17 74 9.71E-11 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 272 442 4.4E-59 T 29-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AM474_RS23375 b028a06710f6ed96a8708d6a8ba8ffe3 450 Gene3D G3DSA:2.40.50.140 17 92 4.2E-17 T 29-03-2018 AM474_RS03400 d2d4a53d9ef72a984a2399285afbc2a4 402 Gene3D G3DSA:1.10.10.10 200 398 0.07 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03400 d2d4a53d9ef72a984a2399285afbc2a4 402 Pfam PF06224 Winged helix DNA-binding domain 38 379 2.7E-82 T 29-03-2018 IPR009351 Protein of unknown function DUF1006 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 23 211 1.9E-27 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 Gene3D G3DSA:3.50.50.60 19 177 5.0E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 21 43 2.6E-9 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 2.6E-9 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.6E-9 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 SUPERFAMILY SSF51905 19 229 9.39E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 3.3E-5 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 3.3E-5 T 29-03-2018 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 SUPERFAMILY SSF51905 182 418 2.11E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15810 a77679f1bba75e6d525108b3bd69d010 450 Gene3D G3DSA:3.50.50.60 181 429 3.2E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09525 3a43ab936d65a83d1d134b5b9b833c80 193 SUPERFAMILY SSF52499 11 191 2.09E-51 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS09525 3a43ab936d65a83d1d134b5b9b833c80 193 Gene3D G3DSA:3.40.50.850 2 193 3.5E-49 T 29-03-2018 AM474_RS09525 3a43ab936d65a83d1d134b5b9b833c80 193 Pfam PF00857 Isochorismatase family 14 185 2.1E-34 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS07940 43b9fbbf1122b770eaa0bc4dad01d0e5 568 Pfam PF14903 WG containing repeat 316 336 0.0085 T 29-03-2018 IPR032774 WG containing repeat AM474_RS07940 43b9fbbf1122b770eaa0bc4dad01d0e5 568 Pfam PF14903 WG containing repeat 130 164 4.7E-4 T 29-03-2018 IPR032774 WG containing repeat AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 31 199 6.8E-54 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 552 9.9E-28 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 SUPERFAMILY SSF52467 184 377 7.32E-38 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Gene3D G3DSA:3.40.50.1220 218 369 4.4E-34 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 350 2.9E-26 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 SUPERFAMILY SSF52518 22 204 1.31E-52 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 SUPERFAMILY SSF52518 386 557 4.11E-42 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Gene3D G3DSA:3.40.50.970 370 558 2.5E-30 T 29-03-2018 AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 Gene3D G3DSA:3.40.50.970 24 217 2.0E-54 T 29-03-2018 AM474_RS18290 6b82b1bb43ed3084aeb9fef1fe22446f 559 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 443 462 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS20960 b71cc716924269ce5e2b4e4127763985 125 Pfam PF03330 Lytic transglycolase 33 121 1.7E-28 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS20960 b71cc716924269ce5e2b4e4127763985 125 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 34 124 4.7E-43 T 29-03-2018 IPR012997 Rare lipoprotein A AM474_RS20960 b71cc716924269ce5e2b4e4127763985 125 SUPERFAMILY SSF50685 30 121 1.88E-13 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS20960 b71cc716924269ce5e2b4e4127763985 125 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 5 124 23.732 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM474_RS20960 b71cc716924269ce5e2b4e4127763985 125 Gene3D G3DSA:2.40.40.10 22 123 5.2E-24 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 SMART SM00966 8 53 3.8E-9 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 Gene3D G3DSA:2.10.260.10 6 51 6.4E-12 T 29-03-2018 AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 8 68 5.0E-9 T 29-03-2018 AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 1.3E-10 T 29-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 8 101 2.7E-17 T 29-03-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 AM474_RS03135 29e192a7c046ab6658d679bf63367e20 105 SUPERFAMILY SSF89447 3 49 1.74E-10 T 29-03-2018 AM474_RS01960 af6ff79161253c9f06e12bcefc316b3f 299 Pfam PF03631 Virulence factor BrkB 24 276 1.7E-70 T 29-03-2018 IPR017039 Virulence factor BrkB AM474_RS01960 af6ff79161253c9f06e12bcefc316b3f 299 PIRSF PIRSF035875 7 296 2.9E-88 T 29-03-2018 IPR017039 Virulence factor BrkB AM474_RS01960 af6ff79161253c9f06e12bcefc316b3f 299 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 16 275 2.0E-44 T 29-03-2018 IPR017039 Virulence factor BrkB AM474_RS22600 335b403729417ba95884335478d67930 471 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS22600 335b403729417ba95884335478d67930 471 Pfam PF00324 Amino acid permease 22 450 2.1E-117 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS22600 335b403729417ba95884335478d67930 471 PIRSF PIRSF006060 1 462 1.6E-74 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS17350 0fb6104dceb32d5d8771765f67747c5b 196 Gene3D G3DSA:2.60.120.10 9 110 9.7E-37 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS17350 0fb6104dceb32d5d8771765f67747c5b 196 Gene3D G3DSA:2.60.120.10 111 195 2.0E-25 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS17350 0fb6104dceb32d5d8771765f67747c5b 196 Pfam PF05962 HutD 11 181 1.5E-54 T 29-03-2018 IPR010282 Uncharacterised protein family HutD/Ves AM474_RS17350 0fb6104dceb32d5d8771765f67747c5b 196 SUPERFAMILY SSF51182 4 190 2.96E-57 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS14500 688366089165f83cc3a52b75bed21c74 151 Pfam PF02566 OsmC-like protein 53 145 6.8E-20 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS14500 688366089165f83cc3a52b75bed21c74 151 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 12 147 4.0E-64 T 29-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AM474_RS14500 688366089165f83cc3a52b75bed21c74 151 SUPERFAMILY SSF82784 10 149 6.02E-42 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS14500 688366089165f83cc3a52b75bed21c74 151 Gene3D G3DSA:3.30.300.20 10 150 5.3E-31 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS05345 3e29310b879bf372de7bbfe5f80d6ea4 270 SUPERFAMILY SSF56300 192 253 5.7E-33 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS05345 3e29310b879bf372de7bbfe5f80d6ea4 270 SUPERFAMILY SSF56300 15 136 5.7E-33 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS05345 3e29310b879bf372de7bbfe5f80d6ea4 270 Gene3D G3DSA:3.60.21.10 2 261 5.6E-29 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS05345 3e29310b879bf372de7bbfe5f80d6ea4 270 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 17 231 1.1E-13 T 29-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 AM474_RS12940 4b9b72ca72c813085aaefc9fb796e219 274 SUPERFAMILY SSF109604 1 263 6.28E-64 T 29-03-2018 AM474_RS12940 4b9b72ca72c813085aaefc9fb796e219 274 Pfam PF08668 HDOD domain 2 195 3.3E-54 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AM474_RS12940 4b9b72ca72c813085aaefc9fb796e219 274 Gene3D G3DSA:1.10.3210.10 1 238 9.1E-40 T 29-03-2018 AM474_RS03410 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 96 176 4.7E-15 T 29-03-2018 AM474_RS03410 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:1.10.10.10 2 90 7.6E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03410 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF53850 95 282 3.26E-26 T 29-03-2018 AM474_RS03410 0ca92ff476d439de2557d13290146450 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.0E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03410 0ca92ff476d439de2557d13290146450 284 Pfam PF03466 LysR substrate binding domain 96 282 1.7E-25 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03410 0ca92ff476d439de2557d13290146450 284 Gene3D G3DSA:3.40.190.10 177 256 3.7E-12 T 29-03-2018 AM474_RS03410 0ca92ff476d439de2557d13290146450 284 SUPERFAMILY SSF46785 7 116 1.68E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25770 f507412d903035669dae64a986e2522f 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS25770 f507412d903035669dae64a986e2522f 244 Pfam PF00005 ABC transporter 17 165 1.6E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS25770 f507412d903035669dae64a986e2522f 244 SUPERFAMILY SSF52540 1 226 3.59E-76 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25770 f507412d903035669dae64a986e2522f 244 Gene3D G3DSA:3.40.50.300 1 240 1.7E-69 T 29-03-2018 AM474_RS25770 f507412d903035669dae64a986e2522f 244 SMART SM00382 26 213 4.8E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS25770 f507412d903035669dae64a986e2522f 244 PIRSF PIRSF039085 1 243 1.3E-102 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS00365 d0bef4849556b03b3a42f4e8dcc92f72 132 Gene3D G3DSA:2.40.50.140 56 123 4.7E-17 T 29-03-2018 AM474_RS00365 d0bef4849556b03b3a42f4e8dcc92f72 132 SUPERFAMILY SSF50249 4 124 3.26E-33 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS00365 d0bef4849556b03b3a42f4e8dcc92f72 132 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 16 50 2.3E-8 T 29-03-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal AM474_RS00365 d0bef4849556b03b3a42f4e8dcc92f72 132 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 55 117 9.5E-19 T 29-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal AM474_RS03970 3c1fed4d1edbe3cf9d5be132114fa5ea 189 Gene3D G3DSA:2.20.70.10 163 188 7.9E-13 T 29-03-2018 AM474_RS03970 3c1fed4d1edbe3cf9d5be132114fa5ea 189 Gene3D G3DSA:3.10.540.10 8 88 6.9E-38 T 29-03-2018 AM474_RS03970 3c1fed4d1edbe3cf9d5be132114fa5ea 189 Pfam PF06938 Protein of unknown function (DUF1285) 38 182 2.3E-60 T 29-03-2018 IPR010707 Protein of unknown function DUF1285 AM474_RS03970 3c1fed4d1edbe3cf9d5be132114fa5ea 189 PIRSF PIRSF029557 1 189 5.2E-90 T 29-03-2018 IPR010707 Protein of unknown function DUF1285 AM474_RS03970 3c1fed4d1edbe3cf9d5be132114fa5ea 189 Gene3D G3DSA:2.30.270.10 89 162 1.6E-30 T 29-03-2018 IPR023361 Protein of unknown function DUF1285, beta-roll domain AM474_RS02405 f72d01d6956cc8c6d001ed85ffba9bf9 431 Pfam PF17289 Terminase RNaseH-like domain 254 415 4.3E-5 T 29-03-2018 IPR035421 Terminase, large subunit gp17-like AM474_RS02405 f72d01d6956cc8c6d001ed85ffba9bf9 431 Pfam PF03237 Terminase-like family 21 232 4.8E-28 T 29-03-2018 AM474_RS05300 663e795c6b979d60e3e3f622ed618ccb 484 PIRSF PIRSF006247 1 484 4.5E-169 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM474_RS05300 663e795c6b979d60e3e3f622ed618ccb 484 Pfam PF02386 Cation transport protein 41 476 2.4E-56 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM474_RS07675 0b101ee26c576a813c77d6b4b5d52867 117 PIRSF PIRSF029611 1 117 9.6E-71 T 29-03-2018 IPR016928 Uncharacterised conserved protein UCP029611 AM474_RS07675 0b101ee26c576a813c77d6b4b5d52867 117 Pfam PF03692 Putative zinc- or iron-chelating domain 20 81 4.7E-10 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM474_RS24745 cf464395d17eb18577ea2754a1031a27 267 SUPERFAMILY SSF53335 1 249 2.52E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS24745 cf464395d17eb18577ea2754a1031a27 267 Pfam PF13649 Methyltransferase domain 86 168 6.0E-11 T 29-03-2018 AM474_RS24745 cf464395d17eb18577ea2754a1031a27 267 PIRSF PIRSF018249 1 267 3.6E-82 T 29-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 AM474_RS24745 cf464395d17eb18577ea2754a1031a27 267 Gene3D G3DSA:3.40.50.150 1 267 3.0E-45 T 29-03-2018 AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 SUPERFAMILY SSF52540 16 267 7.23E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 SMART SM00382 44 242 2.3E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 18 269 2.2E-117 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 Gene3D G3DSA:3.40.50.300 16 271 5.2E-60 T 29-03-2018 AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 Pfam PF00005 ABC transporter 36 192 2.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06255 18a671b19160b5a51ad5fa35305b0907 271 PIRSF PIRSF037116 7 271 3.1E-144 T 29-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 SUPERFAMILY SSF47203 284 456 2.09E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 279 451 1.6E-23 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Gene3D G3DSA:1.10.540.10 33 155 3.7E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 268 6.8E-18 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Gene3D G3DSA:2.40.110.10 156 271 6.6E-24 T 29-03-2018 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 45 155 1.2E-12 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 26 4.4E-10 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Gene3D G3DSA:1.20.140.10 272 459 1.7E-43 T 29-03-2018 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 SUPERFAMILY SSF56645 39 276 2.36E-55 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS16900 d3812f4287f18c0dc35dd2b544f4172d 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 590 1.2E-29 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 Pfam PF00672 HAMP domain 206 255 2.0E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 500 2.7E-47 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 SMART SM00304 206 258 1.1E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 SUPERFAMILY SSF58104 226 535 3.53E-76 T 29-03-2018 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 SMART SM00283 273 534 2.8E-80 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 Gene3D G3DSA:1.10.287.950 74 312 5.4E-10 T 29-03-2018 AM474_RS00175 4fd42d2356366ba9813a0d0dbe38f7b9 535 Gene3D G3DSA:1.10.287.950 313 535 7.2E-54 T 29-03-2018 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 125 423 7.7E-58 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 Pfam PF09298 Fumarylacetoacetase N-terminal 23 119 2.6E-22 T 29-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 9 426 1.3E-209 T 29-03-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 SUPERFAMILY SSF63433 8 119 2.48E-29 T 29-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 SUPERFAMILY SSF56529 121 426 1.83E-94 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 Gene3D G3DSA:3.90.850.10 119 411 7.9E-85 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS29355 a578ef2741f2ca8dbd5888335dea23ee 432 Gene3D G3DSA:2.30.30.230 9 118 1.4E-27 T 29-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 Gene3D G3DSA:1.10.10.60 248 303 1.9E-14 T 29-03-2018 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 Gene3D G3DSA:2.60.120.280 37 182 4.5E-16 T 29-03-2018 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 SUPERFAMILY SSF46689 248 295 7.62E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 7 295 2.0E-145 T 29-03-2018 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 SMART SM00342 210 293 3.9E-17 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 Pfam PF02311 AraC-like ligand binding domain 32 165 2.0E-14 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 Gene3D G3DSA:1.10.10.60 185 246 1.1E-4 T 29-03-2018 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 Pfam PF12833 Helix-turn-helix domain 216 295 1.3E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 SUPERFAMILY SSF51182 38 120 2.13E-10 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10470 0e2400ff0d31ed61f031a21fd86e4542 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 6.2E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 Pfam PF00155 Aminotransferase class I and II 165 366 1.8E-17 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 7.4E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 7.4E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 SUPERFAMILY SSF46785 19 91 1.28E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 9.2E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 Gene3D G3DSA:1.10.10.10 15 89 1.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 Gene3D G3DSA:3.90.1150.10 393 493 1.4E-11 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 Gene3D G3DSA:3.40.640.10 146 392 3.2E-45 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 SUPERFAMILY SSF53383 133 491 8.16E-83 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS10695 9afce517e6dbffff65fb2473801e9652 496 SMART SM00345 28 87 2.7E-15 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 205 4.1E-7 T 29-03-2018 AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 Gene3D G3DSA:3.40.50.720 6 290 3.0E-58 T 29-03-2018 AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.6E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 SUPERFAMILY SSF51735 7 253 2.15E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 7.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 7.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 7.6E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23970 ccfff6382e6618da8dbc5e27a6e585c7 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 6.1E-42 T 29-03-2018 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 90 175 1.6E-17 T 29-03-2018 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:3.40.190.10 176 256 1.7E-15 T 29-03-2018 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF46785 7 113 4.61E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 Pfam PF03466 LysR substrate binding domain 90 286 1.6E-39 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 SUPERFAMILY SSF53850 92 291 5.25E-43 T 29-03-2018 AM474_RS08945 f5da2a4c0998617391541157e069cfaf 298 Gene3D G3DSA:1.10.10.10 4 87 1.7E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00980 8d8ac29c8f32ed7bff7459c27b5c5539 294 SUPERFAMILY SSF103481 48 149 3.14E-17 T 29-03-2018 AM474_RS00980 8d8ac29c8f32ed7bff7459c27b5c5539 294 SUPERFAMILY SSF103481 188 288 6.28E-13 T 29-03-2018 AM474_RS00980 8d8ac29c8f32ed7bff7459c27b5c5539 294 Pfam PF00892 EamA-like transporter family 15 145 8.3E-20 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS00980 8d8ac29c8f32ed7bff7459c27b5c5539 294 Pfam PF00892 EamA-like transporter family 156 281 1.8E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Gene3D G3DSA:3.40.1020.10 339 515 3.2E-72 T 29-03-2018 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 430 513 2.7E-25 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 9.5E-24 T 29-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Gene3D G3DSA:3.40.50.1100 147 322 2.4E-51 T 29-03-2018 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.0E-81 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS25700 fa1642c94e52f76214615288392c3371 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 513 4.8E-241 T 29-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 SUPERFAMILY SSF53686 16 366 1.57E-103 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS25700 fa1642c94e52f76214615288392c3371 515 SUPERFAMILY SSF55021 421 513 2.75E-27 T 29-03-2018 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM474_RS25700 fa1642c94e52f76214615288392c3371 515 Gene3D G3DSA:3.40.50.1100 40 146 4.4E-30 T 29-03-2018 AM474_RS03005 03cdb233be1dba73474fa9f126c98265 196 Gene3D G3DSA:1.10.530.10 23 191 8.1E-16 T 29-03-2018 AM474_RS03005 03cdb233be1dba73474fa9f126c98265 196 Pfam PF01464 Transglycosylase SLT domain 36 157 2.4E-6 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS03005 03cdb233be1dba73474fa9f126c98265 196 SUPERFAMILY SSF53955 33 75 2.01E-15 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS03005 03cdb233be1dba73474fa9f126c98265 196 SUPERFAMILY SSF53955 103 178 2.01E-15 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS16165 6bacd01c0821155ac13ce70a5e3ff0c3 154 SUPERFAMILY SSF54637 7 142 9.08E-45 T 29-03-2018 IPR029069 HotDog domain AM474_RS16165 6bacd01c0821155ac13ce70a5e3ff0c3 154 Gene3D G3DSA:3.10.129.10 4 150 3.9E-37 T 29-03-2018 AM474_RS16165 6bacd01c0821155ac13ce70a5e3ff0c3 154 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 16 124 2.3E-26 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM474_RS16165 6bacd01c0821155ac13ce70a5e3ff0c3 154 PIRSF PIRSF003230 2 145 3.3E-28 T 29-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AM474_RS16165 6bacd01c0821155ac13ce70a5e3ff0c3 154 Pfam PF03061 Thioesterase superfamily 26 110 2.6E-19 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS20295 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Gene3D G3DSA:2.40.10.220 1 125 8.0E-22 T 29-03-2018 AM474_RS20295 c8345e1ca0dad9808f08ab02d6ffc6aa 125 SUPERFAMILY SSF141371 1 123 4.32E-39 T 29-03-2018 AM474_RS20295 c8345e1ca0dad9808f08ab02d6ffc6aa 125 Pfam PF07238 PilZ domain 7 103 4.0E-12 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS20295 c8345e1ca0dad9808f08ab02d6ffc6aa 125 PIRSF PIRSF028141 4 123 1.3E-39 T 29-03-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type AM474_RS19805 c8340287624575ecdcf458cc17f63cd1 202 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 195 19.969 T 29-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 AM474_RS19805 c8340287624575ecdcf458cc17f63cd1 202 Pfam PF01794 Ferric reductase like transmembrane component 43 154 1.3E-16 T 29-03-2018 IPR013130 Ferric reductase transmembrane component-like domain AM474_RS12330 0d15141d8ff198603d2d12f3f92ae37b 323 PIRSF PIRSF018266 5 323 1.5E-85 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS12330 0d15141d8ff198603d2d12f3f92ae37b 323 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 2.7E-14 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS12330 0d15141d8ff198603d2d12f3f92ae37b 323 Pfam PF04773 FecR protein 122 209 2.4E-17 T 29-03-2018 IPR006860 FecR protein AM474_RS25285 11ae5017452ccc2a52a3328e46aa9969 481 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 444 4.2E-144 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM474_RS25285 11ae5017452ccc2a52a3328e46aa9969 481 SUPERFAMILY SSF56954 26 440 4.19E-86 T 29-03-2018 AM474_RS25285 11ae5017452ccc2a52a3328e46aa9969 481 Gene3D G3DSA:1.20.1600.10 19 436 3.4E-69 T 29-03-2018 AM474_RS25285 11ae5017452ccc2a52a3328e46aa9969 481 Pfam PF02321 Outer membrane efflux protein 247 430 2.5E-32 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS25285 11ae5017452ccc2a52a3328e46aa9969 481 Pfam PF02321 Outer membrane efflux protein 31 219 1.2E-24 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 443 567 1.4E-20 T 29-03-2018 IPR000014 PAS domain AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SMART SM00091 446 512 6.3E-15 T 29-03-2018 IPR000014 PAS domain AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Pfam PF05228 CHASE4 domain 137 299 4.7E-28 T 29-03-2018 IPR007892 CHASE4 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SMART SM00086 518 560 0.0034 T 29-03-2018 IPR001610 PAC motif AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SMART SM00267 560 731 7.8E-64 T 29-03-2018 IPR000160 GGDEF domain AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Pfam PF00672 HAMP domain 395 443 9.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SMART SM00304 394 446 3.2E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SUPERFAMILY SSF55073 576 731 1.02E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Pfam PF00989 PAS fold 447 557 1.1E-14 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Gene3D G3DSA:3.30.70.270 565 735 4.8E-60 T 29-03-2018 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SUPERFAMILY SSF158472 395 443 7.98E-5 T 29-03-2018 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 569 727 2.2E-42 T 29-03-2018 IPR000160 GGDEF domain AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Gene3D G3DSA:3.30.450.20 425 564 1.8E-31 T 29-03-2018 AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 SUPERFAMILY SSF55785 433 558 5.64E-27 T 29-03-2018 IPR000014 PAS domain AM474_RS22900 cf7d7c435c551f3c19e02509be971ad5 735 Pfam PF00990 Diguanylate cyclase, GGDEF domain 571 725 1.5E-45 T 29-03-2018 IPR000160 GGDEF domain AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 Gene3D G3DSA:1.10.1740.10 81 147 8.4E-9 T 29-03-2018 AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 SUPERFAMILY SSF88946 86 164 1.84E-6 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 85 239 6.4E-20 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 Pfam PF08281 Sigma-70, region 4 183 235 3.7E-14 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 Gene3D G3DSA:1.10.10.10 148 242 1.0E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25890 206189b0994777225e6a19ce62b9028f 246 SUPERFAMILY SSF88659 177 240 7.2E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS24955 9cf0a3f59bdf9f9eb217900fed8c19ec 254 SUPERFAMILY SSF55909 2 253 1.2E-58 T 29-03-2018 AM474_RS24955 9cf0a3f59bdf9f9eb217900fed8c19ec 254 Pfam PF02274 Amidinotransferase 58 251 1.7E-15 T 29-03-2018 AM474_RS24955 9cf0a3f59bdf9f9eb217900fed8c19ec 254 Gene3D G3DSA:3.75.10.10 1 254 4.1E-55 T 29-03-2018 AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 SUPERFAMILY SSF47090 324 393 3.14E-14 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 Pfam PF01471 Putative peptidoglycan binding domain 339 393 6.3E-11 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.101.10 324 397 5.9E-12 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 25 319 1.3E-110 T 29-03-2018 IPR011970 Lytic murein transglycosylase AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 Pfam PF13406 Transglycosylase SLT domain 25 316 6.5E-104 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.8.350 91 193 2.5E-30 T 29-03-2018 AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 Gene3D G3DSA:1.10.530.10 199 323 1.2E-36 T 29-03-2018 AM474_RS24795 b71c8bd80bc97f308fb9c0a27deb819e 398 SUPERFAMILY SSF53955 10 322 1.63E-98 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 Gene3D G3DSA:3.40.50.1000 77 222 7.8E-35 T 29-03-2018 IPR023214 HAD-like domain AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 SUPERFAMILY SSF56784 3 215 4.2E-58 T 29-03-2018 IPR023214 HAD-like domain AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 Gene3D G3DSA:3.40.50.1000 1 33 0.13 T 29-03-2018 IPR023214 HAD-like domain AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 125 186 1.7E-8 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 Gene3D G3DSA:1.10.150.240 34 76 3.7E-15 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 6.3E-30 T 29-03-2018 IPR023214 HAD-like domain AM474_RS04070 3eb290c62e44d0cec785d2972571d099 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 6.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS31660 26f773998b048a316166f53dea9bf933 439 SUPERFAMILY SSF50952 126 437 7.19E-33 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM474_RS31660 26f773998b048a316166f53dea9bf933 439 SUPERFAMILY SSF50952 65 97 7.19E-33 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM474_RS31660 26f773998b048a316166f53dea9bf933 439 Gene3D G3DSA:2.120.10.30 56 323 1.9E-36 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS31660 26f773998b048a316166f53dea9bf933 439 Gene3D G3DSA:2.120.10.30 324 439 1.6E-16 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS31660 26f773998b048a316166f53dea9bf933 439 Pfam PF07995 Glucose / Sorbosone dehydrogenase 166 360 1.1E-13 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF51905 308 449 6.92E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF51905 5 212 6.92E-58 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 9.4E-7 T 29-03-2018 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 9.4E-7 T 29-03-2018 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF54862 451 551 9.11E-29 T 29-03-2018 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.7E-7 T 29-03-2018 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 SUPERFAMILY SSF54373 212 307 2.86E-37 T 29-03-2018 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 Gene3D G3DSA:3.50.50.60 1 387 1.1E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS03965 5f4249cf80eab732d2bd59dbc98cb6ab 551 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 548 1.9E-50 T 29-03-2018 AM474_RS31060 b730950fc349ccfded0f2ee4e5e10e6c 706 Pfam PF00593 TonB dependent receptor 231 702 1.4E-46 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31060 b730950fc349ccfded0f2ee4e5e10e6c 706 Gene3D G3DSA:2.40.170.20 173 706 1.9E-67 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS31060 b730950fc349ccfded0f2ee4e5e10e6c 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 161 7.9E-18 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS31060 b730950fc349ccfded0f2ee4e5e10e6c 706 SUPERFAMILY SSF56935 29 706 2.98E-110 T 29-03-2018 AM474_RS31060 b730950fc349ccfded0f2ee4e5e10e6c 706 Gene3D G3DSA:2.170.130.10 29 168 4.8E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS28920 1ffc6dd159d7f7a70569e8e11a24c333 269 SUPERFAMILY SSF53335 9 202 2.28E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS28920 1ffc6dd159d7f7a70569e8e11a24c333 269 Pfam PF13649 Methyltransferase domain 49 155 3.7E-9 T 29-03-2018 AM474_RS28920 1ffc6dd159d7f7a70569e8e11a24c333 269 Gene3D G3DSA:3.40.50.150 2 267 5.0E-29 T 29-03-2018 AM474_RS23090 2dac0adb7e3d7a5ea909428890c5ffb7 400 Pfam PF02515 CoA-transferase family III 10 376 2.9E-111 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM474_RS23090 2dac0adb7e3d7a5ea909428890c5ffb7 400 SUPERFAMILY SSF89796 8 400 8.11E-125 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS23090 2dac0adb7e3d7a5ea909428890c5ffb7 400 Gene3D G3DSA:3.40.50.10540 4 400 4.2E-127 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS17150 7fa0ad89d7d6c0144e3308ef1254aa36 86 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 11 84 8.5E-27 T 29-03-2018 IPR018680 Protein of unknown function DUF2164 AM474_RS29995 6847492324d122cc610a59f01379096c 454 Pfam PF00999 Sodium/hydrogen exchanger family 338 442 1.3E-6 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS29995 6847492324d122cc610a59f01379096c 454 Pfam PF00999 Sodium/hydrogen exchanger family 11 276 1.0E-26 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 SUPERFAMILY SSF46785 3 83 1.85E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 3.6E-13 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 SMART SM00418 6 84 2.3E-30 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.7E-22 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.7E-22 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.7E-22 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 5.7E-22 T 29-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AM474_RS31000 10bc5979fc5b23f2f33f04ee890ef805 116 Gene3D G3DSA:1.10.10.10 2 114 3.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 SUPERFAMILY SSF53850 95 294 8.51E-27 T 29-03-2018 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 SUPERFAMILY SSF46785 4 87 2.72E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.5E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 Gene3D G3DSA:3.40.190.10 179 261 5.1E-20 T 29-03-2018 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 Gene3D G3DSA:3.40.190.10 91 178 4.1E-7 T 29-03-2018 AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 Pfam PF03466 LysR substrate binding domain 95 293 2.1E-22 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14670 c62e830093af4dd15056211ae07eceaf 295 Gene3D G3DSA:1.10.10.10 2 88 1.7E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 7 87 5.49E-9 T 29-03-2018 AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 PIRSF PIRSF028103 7 182 4.1E-67 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 SUPERFAMILY SSF55021 95 181 7.67E-15 T 29-03-2018 AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 7 91 9.0E-4 T 29-03-2018 AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 Gene3D G3DSA:3.30.70.260 97 184 4.7E-7 T 29-03-2018 AM474_RS23885 565e643b18a769b6be672bc6e2e3b762 185 Pfam PF13740 ACT domain 9 83 1.3E-14 T 29-03-2018 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 Pfam PF00924 Mechanosensitive ion channel 584 781 4.3E-42 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 SUPERFAMILY SSF82861 540 624 3.66E-13 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 SUPERFAMILY SSF82689 700 792 4.18E-14 T 29-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 SUPERFAMILY SSF50182 626 691 6.21E-16 T 29-03-2018 IPR010920 LSM domain AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 Gene3D G3DSA:2.30.30.60 642 692 3.7E-13 T 29-03-2018 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 Gene3D G3DSA:3.30.70.100 698 787 1.6E-12 T 29-03-2018 AM474_RS26095 8e7da1f06ea277d5fca2ce81f602a559 807 Pfam PF12607 Protein of unknown function (DUF3772) 140 200 4.3E-19 T 29-03-2018 IPR022249 Domain of unknown function DUF3772 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-39 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.179 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 6.0E-17 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.9E-38 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 SUPERFAMILY SSF110324 2 80 2.13E-33 T 29-03-2018 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 Gene3D G3DSA:2.40.50.100 20 85 1.9E-29 T 29-03-2018 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 29-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.6E-37 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.6E-37 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS20510 22408758d4a7dc69c3799fc8677dd1fa 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.6E-37 T 29-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Pfam PF13549 ATP-grasp domain 493 706 2.0E-61 T 29-03-2018 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 SUPERFAMILY SSF51735 20 145 6.34E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 SUPERFAMILY SSF52210 148 309 8.5E-37 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Gene3D G3DSA:3.30.470.20 573 715 3.6E-26 T 29-03-2018 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Gene3D G3DSA:3.30.1490.20 511 572 1.2E-24 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 SUPERFAMILY SSF56059 494 710 4.6E-39 T 29-03-2018 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Gene3D G3DSA:3.40.50.720 17 141 7.9E-40 T 29-03-2018 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Gene3D G3DSA:3.40.50.261 142 313 1.5E-35 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 SMART SM00881 21 116 6.5E-36 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Pfam PF13380 CoA binding domain 25 148 5.5E-24 T 29-03-2018 IPR003781 CoA-binding GO:0048037 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 171 308 9.3E-41 T 29-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 SUPERFAMILY SSF52210 315 469 1.96E-21 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS23935 86a650f287c16165d78ae68c4cab82c8 715 Gene3D G3DSA:3.40.50.261 314 476 3.6E-21 T 29-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM474_RS19310 6c1c2a5d839be34e809e9cceed6ca96c 296 SUPERFAMILY SSF103481 44 145 1.7E-11 T 29-03-2018 AM474_RS19310 6c1c2a5d839be34e809e9cceed6ca96c 296 Pfam PF00892 EamA-like transporter family 152 284 4.5E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19310 6c1c2a5d839be34e809e9cceed6ca96c 296 Pfam PF00892 EamA-like transporter family 15 141 1.5E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19310 6c1c2a5d839be34e809e9cceed6ca96c 296 SUPERFAMILY SSF103481 187 290 1.06E-13 T 29-03-2018 AM474_RS21755 9f87d000100a87f19cffe7a1ec6d0f87 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 254 5.5E-49 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS21755 9f87d000100a87f19cffe7a1ec6d0f87 257 Gene3D G3DSA:3.90.226.10 4 213 2.0E-54 T 29-03-2018 AM474_RS21755 9f87d000100a87f19cffe7a1ec6d0f87 257 Gene3D G3DSA:1.10.12.10 214 248 1.0E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS21755 9f87d000100a87f19cffe7a1ec6d0f87 257 SUPERFAMILY SSF52096 1 254 4.55E-71 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 SUPERFAMILY SSF46785 4 81 6.56E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 Gene3D G3DSA:3.40.190.10 176 263 8.3E-21 T 29-03-2018 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 Gene3D G3DSA:3.40.190.10 91 175 1.6E-15 T 29-03-2018 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 Pfam PF03466 LysR substrate binding domain 92 292 5.3E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 SUPERFAMILY SSF53850 94 295 1.43E-38 T 29-03-2018 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 Gene3D G3DSA:1.10.10.10 5 87 3.2E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12455 c9f01842eccb35176f55e94d535132ec 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 SMART SM00900 82 175 1.5E-13 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 PIRSF PIRSF036354 1 715 0.0 T 29-03-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 Pfam PF04205 FMN-binding domain 85 172 1.5E-6 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 Pfam PF12801 4Fe-4S binding domain 597 643 9.5E-6 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 Pfam PF12801 4Fe-4S binding domain 496 542 6.3E-15 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 SUPERFAMILY SSF54862 513 529 2.96E-6 T 29-03-2018 AM474_RS06330 1b3234d7a7ff8af7301f819615629fe7 715 SUPERFAMILY SSF54862 611 677 2.96E-6 T 29-03-2018 AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 SMART SM00487 20 222 2.7E-62 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 SUPERFAMILY SSF52540 74 359 5.71E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 Gene3D G3DSA:3.40.50.300 11 222 1.0E-59 T 29-03-2018 AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 Gene3D G3DSA:3.40.50.300 223 431 1.9E-42 T 29-03-2018 AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 Pfam PF00271 Helicase conserved C-terminal domain 231 339 3.9E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 SMART SM00490 258 339 8.0E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09510 8da84e7d60b15e1a2ea35965ae25f01e 449 Pfam PF00270 DEAD/DEAH box helicase 25 194 7.2E-48 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS29325 fde449868abc0f2894e1a21cdef1b356 474 Pfam PF02667 Short chain fatty acid transporter 14 458 5.6E-83 T 29-03-2018 IPR006160 Short chain fatty acid transporter AtoE AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 Gene3D G3DSA:3.40.47.10 24 112 0.064 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 PIRSF PIRSF000429 3 375 1.2E-24 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 Pfam PF02803 Thiolase, C-terminal domain 253 358 9.2E-7 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 Gene3D G3DSA:3.40.47.10 140 373 6.6E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 SUPERFAMILY SSF53901 8 224 2.47E-23 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23930 5bb5694bd2ecc692a45b8a3cdc30d5f9 383 SUPERFAMILY SSF53901 248 369 4.74E-25 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS15815 66f65526e605639ca22f8ae7fd9ef315 140 Pfam PF01042 Endoribonuclease L-PSP 26 133 6.6E-22 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS15815 66f65526e605639ca22f8ae7fd9ef315 140 Gene3D G3DSA:3.30.1330.40 12 137 1.5E-27 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS15815 66f65526e605639ca22f8ae7fd9ef315 140 SUPERFAMILY SSF55298 24 137 2.83E-32 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 SMART SM00345 22 80 4.8E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 77 2.1E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 SMART SM00895 90 220 5.8E-12 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 Gene3D G3DSA:1.10.10.10 1 81 3.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 SUPERFAMILY SSF46785 18 84 5.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 Gene3D G3DSA:1.20.120.530 82 235 1.2E-23 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 SUPERFAMILY SSF48008 101 227 6.8E-19 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS10800 696e6165b69f3eaad638bb62b2cff3cb 242 Pfam PF07729 FCD domain 101 219 1.8E-18 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS05145 6efdbeea164c49405d96ae5e0579fe53 238 SUPERFAMILY SSF100950 14 235 7.67E-54 T 29-03-2018 AM474_RS05145 6efdbeea164c49405d96ae5e0579fe53 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 228 2.1E-51 T 29-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AM474_RS05145 6efdbeea164c49405d96ae5e0579fe53 238 Gene3D G3DSA:3.40.50.1360 5 237 1.1E-50 T 29-03-2018 AM474_RS05145 6efdbeea164c49405d96ae5e0579fe53 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 16 232 2.2E-72 T 29-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 AM474_RS01945 bac0fd09e76b311df3ffdbedf31e8566 172 Pfam PF00565 Staphylococcal nuclease homologue 61 158 8.6E-7 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS01945 bac0fd09e76b311df3ffdbedf31e8566 172 Gene3D G3DSA:2.40.50.90 17 167 1.7E-18 T 29-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain AM474_RS01945 bac0fd09e76b311df3ffdbedf31e8566 172 SUPERFAMILY SSF50199 24 165 5.89E-16 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS01945 bac0fd09e76b311df3ffdbedf31e8566 172 SMART SM00318 24 160 5.6E-4 T 29-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AM474_RS05160 51ca7e49ee6257436a9da6b1e9a60625 283 PIRSF PIRSF016020 3 283 4.6E-89 T 29-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 AM474_RS05160 51ca7e49ee6257436a9da6b1e9a60625 283 Gene3D G3DSA:2.70.98.10 11 279 8.0E-35 T 29-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 AM474_RS05160 51ca7e49ee6257436a9da6b1e9a60625 283 SUPERFAMILY SSF74650 18 277 4.65E-50 T 29-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AM474_RS05160 51ca7e49ee6257436a9da6b1e9a60625 283 Pfam PF01263 Aldose 1-epimerase 29 277 9.9E-31 T 29-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AM474_RS01865 0d63366193eb2b8438d489c153943f5f 149 Gene3D G3DSA:1.10.3680.10 13 149 1.4E-15 T 29-03-2018 IPR029024 TerB-like AM474_RS01865 0d63366193eb2b8438d489c153943f5f 149 SUPERFAMILY SSF158682 16 148 5.49E-22 T 29-03-2018 AM474_RS01865 0d63366193eb2b8438d489c153943f5f 149 Pfam PF05099 Tellurite resistance protein TerB 8 148 3.7E-22 T 29-03-2018 IPR007791 Co-chaperone DjlA, N-terminal AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 SUPERFAMILY SSF160996 190 336 2.09E-39 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 SUPERFAMILY SSF51905 335 391 4.53E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 SUPERFAMILY SSF51905 4 188 4.53E-57 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-7 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 367 1.2E-7 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.2E-7 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 Pfam PF03486 HI0933-like protein 5 390 7.1E-151 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 Gene3D G3DSA:2.40.30.10 201 268 1.1E-24 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 Gene3D G3DSA:3.50.50.60 2 200 1.3E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 Gene3D G3DSA:1.10.8.260 269 319 5.6E-11 T 29-03-2018 IPR023166 HI0933 insert-like domain AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.3E-5 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.3E-5 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 367 3.3E-5 T 29-03-2018 AM474_RS11885 2a9c07ea97142773a18496c94b931766 392 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 390 9.2E-127 T 29-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AM474_RS07310 38a3361ac9201d780ebbc1901a6ce0b5 395 Pfam PF02515 CoA-transferase family III 8 370 1.4E-122 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM474_RS07310 38a3361ac9201d780ebbc1901a6ce0b5 395 Gene3D G3DSA:3.40.50.10540 2 395 4.0E-144 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS07310 38a3361ac9201d780ebbc1901a6ce0b5 395 SUPERFAMILY SSF89796 6 393 1.24E-135 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 SUPERFAMILY SSF52540 1 214 7.82E-60 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 Gene3D G3DSA:3.40.50.300 1 218 1.0E-58 T 29-03-2018 AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 218 29.091 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 8.5E-45 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 Pfam PF13500 AAA domain 3 211 2.9E-35 T 29-03-2018 AM474_RS12175 1a7bbfe20c18c32e517c630e9d75769f 228 PIRSF PIRSF006755 1 226 1.5E-76 T 29-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM474_RS24805 eb0ae3290d912ca15029afd4910ffcef 163 PIRSF PIRSF006105 3 162 3.3E-54 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AM474_RS24805 eb0ae3290d912ca15029afd4910ffcef 163 SUPERFAMILY SSF48695 44 153 6.55E-43 T 29-03-2018 IPR011031 Multihaem cytochrome AM474_RS24805 eb0ae3290d912ca15029afd4910ffcef 163 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 40 146 3.4E-46 T 29-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB AM474_RS24805 eb0ae3290d912ca15029afd4910ffcef 163 Gene3D G3DSA:1.10.1130.10 66 132 6.8E-28 T 29-03-2018 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 Pfam PF03466 LysR substrate binding domain 101 293 1.0E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.2E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:3.40.190.10 94 302 1.7E-21 T 29-03-2018 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF46785 7 89 6.19E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 9.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 9.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 9.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 Gene3D G3DSA:1.10.10.10 1 93 2.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32110 1905d5de590325036619e50d6e5b8eee 304 SUPERFAMILY SSF53850 93 294 4.52E-37 T 29-03-2018 AM474_RS29940 4ced753dc663e452ec66c279a5e39c43 482 SUPERFAMILY SSF53720 4 477 2.88E-138 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS29940 4ced753dc663e452ec66c279a5e39c43 482 Pfam PF00171 Aldehyde dehydrogenase family 13 475 4.3E-140 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS29940 4ced753dc663e452ec66c279a5e39c43 482 Gene3D G3DSA:3.40.309.10 264 444 1.0E-62 T 29-03-2018 AM474_RS29940 4ced753dc663e452ec66c279a5e39c43 482 Gene3D G3DSA:3.40.605.10 2 263 2.0E-72 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS18840 6a07ccd07c4bfbc9c94034468b097068 287 Gene3D G3DSA:3.20.20.60 1 287 3.2E-67 T 29-03-2018 AM474_RS18840 6a07ccd07c4bfbc9c94034468b097068 287 Hamap MF_01299 Oxaloacetate decarboxylase. 4 287 48.561 T 29-03-2018 IPR023687 Oxaloacetate decarboxylase, bacterial GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AM474_RS18840 6a07ccd07c4bfbc9c94034468b097068 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 247 2.9E-44 T 29-03-2018 AM474_RS18840 6a07ccd07c4bfbc9c94034468b097068 287 SUPERFAMILY SSF51621 8 283 2.51E-67 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 Gene3D G3DSA:1.20.1250.20 230 538 2.0E-28 T 29-03-2018 AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 Pfam PF00083 Sugar (and other) transporter 25 333 7.6E-31 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 SUPERFAMILY SSF103473 442 535 3.92E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 SUPERFAMILY SSF103473 19 340 3.92E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS07905 b7365f2013023ba58bbdf3a7684765e5 539 Gene3D G3DSA:1.20.1250.20 17 229 1.1E-25 T 29-03-2018 AM474_RS15005 7f826ff64d732b7f122d2f7617d9c593 207 Pfam PF12710 haloacid dehalogenase-like hydrolase 17 195 4.9E-25 T 29-03-2018 AM474_RS15005 7f826ff64d732b7f122d2f7617d9c593 207 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 16 197 1.7E-30 T 29-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like AM474_RS15005 7f826ff64d732b7f122d2f7617d9c593 207 Gene3D G3DSA:3.40.50.1000 13 200 2.5E-7 T 29-03-2018 IPR023214 HAD-like domain AM474_RS15005 7f826ff64d732b7f122d2f7617d9c593 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 15 197 1.5E-39 T 29-03-2018 AM474_RS15005 7f826ff64d732b7f122d2f7617d9c593 207 SUPERFAMILY SSF56784 17 198 5.15E-16 T 29-03-2018 IPR023214 HAD-like domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:3.40.50.300 1 174 3.4E-33 T 29-03-2018 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF46785 578 626 5.44E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Pfam PF00009 Elongation factor Tu GTP binding domain 2 161 3.1E-31 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:1.10.10.10 568 626 8.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:2.40.30.10 175 262 1.6E-18 T 29-03-2018 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:2.40.30.10 269 349 8.8E-17 T 29-03-2018 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:1.10.10.10 506 565 3.8E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Pfam PF09106 Elongation factor SelB, winged helix 442 497 3.1E-15 T 29-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF52540 2 191 8.65E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF46785 504 566 5.27E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF50447 172 261 1.04E-17 T 29-03-2018 IPR009000 Translation protein, beta-barrel domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF46785 432 502 6.26E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 158 2.6E-12 T 29-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 29-03-2018 IPR031157 Tr-type G domain, conserved site AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Pfam PF09107 Elongation factor SelB, winged helix 583 625 2.0E-18 T 29-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 SUPERFAMILY SSF50465 269 365 6.12E-19 T 29-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 Gene3D G3DSA:1.10.10.10 433 497 8.5E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 627 1.3E-145 T 29-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.0E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.0E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.0E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS19190 90d54cb34e1788dd8125218d14cdf0c6 641 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.0E-7 T 29-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 18 319 5.2E-91 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 9 176 2.2E-60 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 Gene3D G3DSA:3.40.50.1370 177 321 3.8E-45 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 316 1.0E-23 T 29-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 17 321 41.802 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 92 101 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 149 166 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 54 76 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 3.4E-31 T 29-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 150 161 7.7E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 7.7E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 7.7E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 64 83 7.7E-18 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 64 71 - T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 162 2.2E-41 T 29-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM474_RS12695 7b4501cd414851280dfb8d473ca15a82 334 SUPERFAMILY SSF53671 17 321 3.8E-95 T 29-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM474_RS12185 30e9e1822353b58665509c610b03dd0b 240 SUPERFAMILY SSF53474 5 236 2.77E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12185 30e9e1822353b58665509c610b03dd0b 240 Gene3D G3DSA:3.40.50.1820 2 237 3.3E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12185 30e9e1822353b58665509c610b03dd0b 240 Pfam PF12697 Alpha/beta hydrolase family 20 229 4.3E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 29-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 SUPERFAMILY SSF55594 1 88 2.22E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 29-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 Gene3D G3DSA:3.30.1340.10 1 88 1.1E-27 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.9E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.9E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.9E-10 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 83 2.2E-25 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS21055 b1a2478387312fb65a670dc47730f730 90 Pfam PF00381 PTS HPr component phosphorylation site 5 83 3.5E-26 T 29-03-2018 IPR000032 Phosphocarrier protein HPr-like AM474_RS20370 4f8369d731bca7f97e20e737803249c6 228 Gene3D G3DSA:3.40.50.300 1 224 3.1E-61 T 29-03-2018 AM474_RS20370 4f8369d731bca7f97e20e737803249c6 228 Pfam PF00005 ABC transporter 21 169 2.0E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20370 4f8369d731bca7f97e20e737803249c6 228 SMART SM00382 30 218 7.5E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20370 4f8369d731bca7f97e20e737803249c6 228 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20370 4f8369d731bca7f97e20e737803249c6 228 SUPERFAMILY SSF52540 1 221 3.16E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 330 1.6E-76 T 29-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 332 153.479 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 Gene3D G3DSA:3.40.630.10 40 297 2.5E-28 T 29-03-2018 AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 PIRSF PIRSF017020 1 332 6.1E-117 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 328 1.7E-115 T 29-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 AM474_RS23185 3f5e5a17969d13cffb2a4ab1f132d458 332 SUPERFAMILY SSF53187 6 329 1.65E-76 T 29-03-2018 AM474_RS01990 ba0b109136fc137d690fceb46fb7ffd2 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 4.1E-29 T 29-03-2018 IPR021250 Protein of unknown function DUF2789 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51338 417 476 2.01E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 29-03-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 5.6E-292 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.5E-56 T 29-03-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Gene3D G3DSA:3.20.20.140 142 420 1.4E-166 T 29-03-2018 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Gene3D G3DSA:3.20.20.140 421 552 6.5E-42 T 29-03-2018 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 29-03-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51556 128 431 2.17E-202 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51556 480 566 2.17E-202 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Gene3D G3DSA:2.30.40.10 63 141 2.7E-17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Pfam PF01979 Amidohydrolase family 124 450 3.6E-79 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 56.758 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 SUPERFAMILY SSF51338 2 176 7.12E-63 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 6.5E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 6.5E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 6.5E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18870 960b542e8ddfb3c6d5e8a849d530f05d 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 6.5E-34 T 29-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 4.1E-17 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 69 3.0E-13 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 SUPERFAMILY SSF57716 38 73 3.14E-8 T 29-03-2018 AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 4.2E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 4.2E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS18855 5d510b0dc4d16c0820e797d5420e56e9 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS14420 f59051079055cca55d9aed6104ace21b 242 Pfam PF13672 Protein phosphatase 2C 21 207 1.7E-11 T 29-03-2018 AM474_RS14420 f59051079055cca55d9aed6104ace21b 242 SUPERFAMILY SSF81606 9 240 3.14E-58 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS14420 f59051079055cca55d9aed6104ace21b 242 SMART SM00331 15 241 6.2E-28 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS14420 f59051079055cca55d9aed6104ace21b 242 SMART SM00332 6 239 3.0E-25 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS14420 f59051079055cca55d9aed6104ace21b 242 Gene3D G3DSA:3.60.40.10 6 240 3.1E-36 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS08960 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 128 304 4.2E-15 T 29-03-2018 AM474_RS08960 0aa80802092e3fdef38eec9d4790df77 451 Gene3D G3DSA:3.40.190.10 41 127 2.1E-8 T 29-03-2018 AM474_RS08960 0aa80802092e3fdef38eec9d4790df77 451 SUPERFAMILY SSF53850 41 319 5.02E-41 T 29-03-2018 AM474_RS08960 0aa80802092e3fdef38eec9d4790df77 451 Pfam PF16868 NMT1-like family 46 319 2.5E-20 T 29-03-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM474_RS14800 ac37c842519adf835e5b69aab92cc304 88 SUPERFAMILY SSF141371 1 86 4.32E-9 T 29-03-2018 AM474_RS14800 ac37c842519adf835e5b69aab92cc304 88 Gene3D G3DSA:2.40.10.220 1 87 1.2E-13 T 29-03-2018 AM474_RS14800 ac37c842519adf835e5b69aab92cc304 88 Pfam PF07238 PilZ domain 4 85 1.6E-9 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS25365 8c522d8bd8ef659660780b86b23a5d6f 480 SUPERFAMILY SSF103473 8 198 9.16E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25365 8c522d8bd8ef659660780b86b23a5d6f 480 Pfam PF07690 Major Facilitator Superfamily 19 420 5.5E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25365 8c522d8bd8ef659660780b86b23a5d6f 480 Gene3D G3DSA:1.20.1250.20 5 207 3.6E-29 T 29-03-2018 AM474_RS25365 8c522d8bd8ef659660780b86b23a5d6f 480 Gene3D G3DSA:1.20.1250.20 265 474 1.3E-18 T 29-03-2018 AM474_RS25365 8c522d8bd8ef659660780b86b23a5d6f 480 SUPERFAMILY SSF103473 213 469 3.01E-25 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS27000 32f551cdf92db07ee9be8c612d833238 465 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 2.5E-251 T 29-03-2018 IPR017715 Putative aminophosphonate oxidoreductase AM474_RS27000 32f551cdf92db07ee9be8c612d833238 465 Pfam PF01266 FAD dependent oxidoreductase 30 393 9.7E-51 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS27000 32f551cdf92db07ee9be8c612d833238 465 Gene3D G3DSA:3.50.50.60 17 438 2.3E-35 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27000 32f551cdf92db07ee9be8c612d833238 465 SUPERFAMILY SSF51905 355 415 4.96E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27000 32f551cdf92db07ee9be8c612d833238 465 SUPERFAMILY SSF51905 29 254 4.96E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15430 3db80e584f7b208b3ed2aa6a92594d86 139 Gene3D G3DSA:3.90.1590.10 1 137 6.7E-42 T 29-03-2018 AM474_RS15430 3db80e584f7b208b3ed2aa6a92594d86 139 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 2.8E-18 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM474_RS15430 3db80e584f7b208b3ed2aa6a92594d86 139 SUPERFAMILY SSF51316 1 130 3.66E-41 T 29-03-2018 IPR011057 Mss4-like AM474_RS26420 aa91b2806b10a121d5e6b012e88f5333 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 219 3.3E-25 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS10065 702ef82738b81ad019bc5e6af1c1df29 600 Pfam PF09822 ABC-type uncharacterized transport system 34 291 9.1E-64 T 29-03-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 AM474_RS10065 702ef82738b81ad019bc5e6af1c1df29 600 Gene3D G3DSA:3.40.50.880 160 480 1.3E-8 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS17005 1e65914c30b94322be4e074e5c44ae77 331 PIRSF PIRSF006470 1 330 3.3E-133 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS17005 1e65914c30b94322be4e074e5c44ae77 331 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.1E-113 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM474_RS17005 1e65914c30b94322be4e074e5c44ae77 331 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 272 3.4E-82 T 29-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 AM474_RS05995 13a30251f42851b2048a555a0b901fc9 141 Gene3D G3DSA:3.10.450.50 2 141 5.0E-27 T 29-03-2018 AM474_RS05995 13a30251f42851b2048a555a0b901fc9 141 Pfam PF12680 SnoaL-like domain 11 112 6.0E-12 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS05995 13a30251f42851b2048a555a0b901fc9 141 SUPERFAMILY SSF54427 1 129 1.62E-38 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS05995 13a30251f42851b2048a555a0b901fc9 141 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 25 129 2.0E-4 T 29-03-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 SMART SM00278 86 105 30.0 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 SMART SM00278 56 75 2.7 T 29-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 Gene3D G3DSA:1.10.150.310 65 109 3.4E-13 T 29-03-2018 AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 Gene3D G3DSA:1.10.150.20 19 64 2.8E-6 T 29-03-2018 AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 SUPERFAMILY SSF47781 34 107 3.22E-24 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 44 108 7.8E-21 T 29-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AM474_RS04960 c31b635dcc08943b9825b4c6d5578c55 109 Pfam PF12836 Helix-hairpin-helix motif 44 106 3.9E-20 T 29-03-2018 AM474_RS02470 5a62308cbf9a88e4b0d3528e721be5f4 190 Pfam PF00717 Peptidase S24-like 106 168 6.3E-5 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS02470 5a62308cbf9a88e4b0d3528e721be5f4 190 Gene3D G3DSA:2.10.109.10 65 187 1.5E-12 T 29-03-2018 AM474_RS02470 5a62308cbf9a88e4b0d3528e721be5f4 190 SUPERFAMILY SSF51306 68 185 2.09E-12 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS12270 8cfba57f0b1009aae746c1c507867bfc 147 Gene3D G3DSA:3.40.630.30 1 146 1.6E-28 T 29-03-2018 AM474_RS12270 8cfba57f0b1009aae746c1c507867bfc 147 SUPERFAMILY SSF55729 3 145 3.09E-33 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS12270 8cfba57f0b1009aae746c1c507867bfc 147 Pfam PF00583 Acetyltransferase (GNAT) family 18 134 9.5E-15 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 116 245 3.45E-31 T 29-03-2018 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 248 18.567 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 Gene3D G3DSA:3.30.420.40 86 246 1.5E-46 T 29-03-2018 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 SUPERFAMILY SSF53067 1 113 5.05E-27 T 29-03-2018 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 243 1.3E-24 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM474_RS11270 8424822d41dd1ed21daab6411d35028f 248 Pfam PF03309 Type III pantothenate kinase 2 200 1.4E-45 T 29-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM474_RS30845 5d1091239d4cb479b67f65d47ee8c05d 410 Gene3D G3DSA:3.40.50.970 2 408 8.7E-91 T 29-03-2018 AM474_RS30845 5d1091239d4cb479b67f65d47ee8c05d 410 SUPERFAMILY SSF52518 4 407 1.42E-96 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS30845 5d1091239d4cb479b67f65d47ee8c05d 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 5 45 1.0E-20 T 29-03-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 AM474_RS30845 5d1091239d4cb479b67f65d47ee8c05d 410 Pfam PF00676 Dehydrogenase E1 component 81 376 2.6E-98 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM474_RS16150 61ecc2e2d71d6dc55c508a0e12af242d 259 Gene3D G3DSA:3.60.10.10 1 259 1.7E-35 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS16150 61ecc2e2d71d6dc55c508a0e12af242d 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 3.0E-58 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM474_RS16150 61ecc2e2d71d6dc55c508a0e12af242d 259 SUPERFAMILY SSF56219 1 254 2.49E-53 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS16150 61ecc2e2d71d6dc55c508a0e12af242d 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 233 2.2E-11 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 61 96 3.5E-9 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 SMART SM00671 97 132 1.0E-6 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 61 96 6.2E-9 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 Pfam PF08238 Sel1 repeat 97 128 5.8E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 SUPERFAMILY SSF81901 34 135 4.84E-22 T 29-03-2018 AM474_RS09765 c3e16461332868e5c06d72f0e985b33f 182 Gene3D G3DSA:2.60.40.1180 35 163 2.7E-28 T 29-03-2018 AM474_RS13585 5392f88a54b56b754fa824fd326bd986 421 Gene3D G3DSA:2.40.160.10 2 421 1.5E-112 T 29-03-2018 AM474_RS13585 5392f88a54b56b754fa824fd326bd986 421 Pfam PF03573 outer membrane porin, OprD family 31 419 3.3E-151 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS30665 dc270bcde83c8be12f5402ced41490e7 469 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 156 436 7.0E-22 T 29-03-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AM474_RS30665 dc270bcde83c8be12f5402ced41490e7 469 Gene3D G3DSA:3.30.360.30 167 469 6.7E-126 T 29-03-2018 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 AM474_RS30665 dc270bcde83c8be12f5402ced41490e7 469 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 11 152 1.4E-28 T 29-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AM474_RS30665 dc270bcde83c8be12f5402ced41490e7 469 SUPERFAMILY SSF51735 10 146 2.85E-6 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30665 dc270bcde83c8be12f5402ced41490e7 469 Gene3D G3DSA:3.40.50.720 5 166 5.7E-23 T 29-03-2018 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 Pfam PF03466 LysR substrate binding domain 86 287 2.0E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS32205 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-11 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF46785 1 86 2.64E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32205 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:1.10.10.10 1 90 1.7E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32205 86590bb891f63361d905949bc28225c7 290 SUPERFAMILY SSF53850 86 285 1.49E-32 T 29-03-2018 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 91 174 1.4E-14 T 29-03-2018 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32205 86590bb891f63361d905949bc28225c7 290 Gene3D G3DSA:3.40.190.10 175 264 5.6E-25 T 29-03-2018 AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 SUPERFAMILY SSF47090 182 253 2.98E-18 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 SUPERFAMILY SSF55846 10 174 1.57E-43 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 Gene3D G3DSA:1.10.101.10 173 255 7.2E-8 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 17 159 1.1E-24 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 SMART SM00644 7 158 1.3E-46 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS22690 72eea03dcfd362917cd1e9cd84319128 255 Gene3D G3DSA:3.40.80.10 17 172 2.0E-40 T 29-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AM474_RS12775 d6827c051ee84fd3a703129a7820fd81 197 Pfam PF01725 Ham1 family 7 193 5.0E-56 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM474_RS12775 d6827c051ee84fd3a703129a7820fd81 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 195 5.8E-57 T 29-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 AM474_RS12775 d6827c051ee84fd3a703129a7820fd81 197 SUPERFAMILY SSF52972 4 195 2.62E-68 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS12775 d6827c051ee84fd3a703129a7820fd81 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 197 48.73 T 29-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 AM474_RS12775 d6827c051ee84fd3a703129a7820fd81 197 Gene3D G3DSA:3.90.950.10 1 196 2.6E-74 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SUPERFAMILY SSF50998 29 369 4.71E-77 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 Gene3D G3DSA:2.140.10.10 275 380 9.0E-7 T 29-03-2018 AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 Gene3D G3DSA:2.140.10.10 21 178 6.3E-27 T 29-03-2018 AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 Gene3D G3DSA:2.140.10.10 179 274 1.5E-11 T 29-03-2018 AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 317 348 220.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 101 133 0.04 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 238 269 14.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 142 173 3.7 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 187 218 180.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 SMART SM00564 62 93 0.0043 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 379 39.524 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 5 377 5.7E-140 T 29-03-2018 IPR017687 Outer membrane protein assembly factor BamB AM474_RS08700 bff6db6733cc1a719310e5667d4d2fa1 380 Pfam PF13360 PQQ-like domain 75 305 1.1E-50 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM474_RS26445 242e57b1adef8238c4f3fc664d1c8251 135 Pfam PF10975 Protein of unknown function (DUF2802) 64 130 4.3E-23 T 29-03-2018 IPR021244 Protein of unknown function DUF2802 AM474_RS26445 242e57b1adef8238c4f3fc664d1c8251 135 Gene3D G3DSA:1.20.5.170 16 94 1.9E-5 T 29-03-2018 AM474_RS07500 0df6b089912d9a1cd6405b57aa844c4f 283 Gene3D G3DSA:3.40.50.1820 1 282 2.1E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07500 0df6b089912d9a1cd6405b57aa844c4f 283 Pfam PF00756 Putative esterase 25 275 5.8E-63 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM474_RS07500 0df6b089912d9a1cd6405b57aa844c4f 283 SUPERFAMILY SSF53474 5 282 1.59E-94 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07500 0df6b089912d9a1cd6405b57aa844c4f 283 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 281 1.3E-127 T 29-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 279 295 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 307 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 279 1.7E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 SUPERFAMILY SSF46894 251 321 3.16E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 Pfam PF00196 Bacterial regulatory proteins, luxR family 264 318 1.1E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 SMART SM00421 262 319 6.3E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 Gene3D G3DSA:3.30.450.40 25 167 3.1E-4 T 29-03-2018 IPR029016 GAF domain-like AM474_RS08550 878b5fe5217607ae0b86e6aa84fee7aa 325 Gene3D G3DSA:1.10.10.10 168 322 5.3E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 36 1.3E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 SUPERFAMILY SSF54523 17 71 1.88E-5 T 29-03-2018 AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 SUPERFAMILY SSF54523 55 208 1.33E-8 T 29-03-2018 AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 3.5E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 Gene3D G3DSA:3.10.610.10 47 159 2.6E-11 T 29-03-2018 AM474_RS22080 f189fe52631ab7bc4a239e57504c15f4 213 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS05190 71c02ee7fa5fe8331e7af1cff528a6ea 420 Pfam PF01547 Bacterial extracellular solute-binding protein 43 322 1.9E-26 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AM474_RS05190 71c02ee7fa5fe8331e7af1cff528a6ea 420 Gene3D G3DSA:3.40.190.10 25 198 9.2E-26 T 29-03-2018 AM474_RS05190 71c02ee7fa5fe8331e7af1cff528a6ea 420 Gene3D G3DSA:3.40.190.10 199 371 1.6E-10 T 29-03-2018 AM474_RS05190 71c02ee7fa5fe8331e7af1cff528a6ea 420 SUPERFAMILY SSF53850 24 418 3.62E-64 T 29-03-2018 AM474_RS21790 0e570c88e79ee185e7b1054d2c43033f 443 Pfam PF01882 Protein of unknown function DUF58 199 283 6.2E-23 T 29-03-2018 IPR002881 Domain of unknown function DUF58 AM474_RS21790 0e570c88e79ee185e7b1054d2c43033f 443 Gene3D G3DSA:3.40.50.410 211 388 2.0E-22 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS21790 0e570c88e79ee185e7b1054d2c43033f 443 SUPERFAMILY SSF53300 240 365 1.53E-7 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Pfam PF01839 FG-GAP repeat 189 230 8.5E-5 T 29-03-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 SUPERFAMILY SSF51120 1853 2041 7.06E-11 T 29-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 319 397 6.5E-23 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1660 1729 1.6E-4 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 971 1058 6.1E-16 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1059 1139 3.4E-17 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1221 1302 2.3E-20 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 144 252 6.2E-11 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1303 1383 3.7E-18 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 637 725 7.3E-18 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 809 889 7.6E-18 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1140 1220 4.7E-19 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 474 562 3.1E-20 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 726 808 1.3E-20 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 890 970 4.4E-18 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1467 1563 1.9E-15 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 398 473 1.2E-17 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 563 636 2.1E-16 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1384 1466 4.6E-19 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.1310 1737 1865 0.0012 T 29-03-2018 AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.10 1564 1659 4.9E-5 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS28670 e48f8236638e2866feaa9f2589a6cc4d 2050 Gene3D G3DSA:2.60.40.10 253 318 4.6E-13 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS02465 98026d2647169717377d1ba9cec5f6db 72 Gene3D G3DSA:1.10.260.40 1 63 2.0E-16 T 29-03-2018 AM474_RS02465 98026d2647169717377d1ba9cec5f6db 72 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 8 69 1.7E-19 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM474_RS02465 98026d2647169717377d1ba9cec5f6db 72 SUPERFAMILY SSF47413 8 68 6.43E-13 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS22290 0eae0bd16c8e64c120c5c464a40a06e5 347 Pfam PF03734 L,D-transpeptidase catalytic domain 59 167 2.1E-18 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM474_RS22290 0eae0bd16c8e64c120c5c464a40a06e5 347 SUPERFAMILY SSF141523 55 166 1.44E-28 T 29-03-2018 AM474_RS22290 0eae0bd16c8e64c120c5c464a40a06e5 347 PIRSF PIRSF029342 1 339 1.3E-133 T 29-03-2018 IPR016915 Uncharacterised conserved protein UCP029342 AM474_RS22290 0eae0bd16c8e64c120c5c464a40a06e5 347 Gene3D G3DSA:2.40.440.10 207 285 0.24 T 29-03-2018 AM474_RS22290 0eae0bd16c8e64c120c5c464a40a06e5 347 Gene3D G3DSA:2.40.440.10 51 169 1.3E-24 T 29-03-2018 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 Pfam PF08281 Sigma-70, region 4 132 184 4.7E-11 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 Pfam PF04542 Sigma-70 region 2 32 98 3.4E-16 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 SUPERFAMILY SSF88946 13 115 7.06E-28 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 Gene3D G3DSA:1.10.10.10 102 191 1.7E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 SUPERFAMILY SSF88659 115 190 1.07E-14 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 Gene3D G3DSA:1.10.1740.10 8 101 3.3E-25 T 29-03-2018 AM474_RS03665 4565297302e8faeb1680c576f55e0b66 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 187 8.6E-28 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS24080 91629e77563827d708fc51c94f9cb792 154 Pfam PF05425 Copper resistance protein D 48 150 3.3E-19 T 29-03-2018 IPR008457 Copper resistance protein D GO:0016021 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 Gene3D G3DSA:1.10.45.10 489 528 1.2E-8 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 Gene3D G3DSA:3.30.43.10 6 143 3.3E-18 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 Pfam PF01565 FAD binding domain 88 215 6.4E-29 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 SUPERFAMILY SSF55103 269 530 5.07E-36 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 Gene3D G3DSA:3.30.465.10 144 287 9.3E-23 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 SUPERFAMILY SSF56176 56 264 2.62E-42 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS04345 4631ba33a000333362cbfb8d68c5e14e 531 Pfam PF02913 FAD linked oxidases, C-terminal domain 266 526 1.4E-46 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM474_RS12140 135e90a473d260535b3378fe77174195 279 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 98 131 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS12140 135e90a473d260535b3378fe77174195 279 Gene3D G3DSA:3.30.950.10 143 265 2.0E-37 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS12140 135e90a473d260535b3378fe77174195 279 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 23 37 - T 29-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS12140 135e90a473d260535b3378fe77174195 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 230 4.6E-50 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS12140 135e90a473d260535b3378fe77174195 279 Gene3D G3DSA:3.40.1010.10 17 142 7.2E-37 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS12140 135e90a473d260535b3378fe77174195 279 SUPERFAMILY SSF53790 14 263 1.83E-82 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS12140 135e90a473d260535b3378fe77174195 279 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 18 253 1.8E-94 T 29-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 AM474_RS17735 8a2f881a71f0fb1e00e6bec62105b686 1280 Pfam PF06791 Prophage tail length tape measure protein 201 336 3.2E-23 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AM474_RS17735 8a2f881a71f0fb1e00e6bec62105b686 1280 Pfam PF06791 Prophage tail length tape measure protein 327 474 8.2E-42 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AM474_RS17735 8a2f881a71f0fb1e00e6bec62105b686 1280 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 775 1022 7.2E-31 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS17735 8a2f881a71f0fb1e00e6bec62105b686 1280 Gene3D G3DSA:1.20.1480.30 127 335 8.3E-4 T 29-03-2018 AM474_RS17735 8a2f881a71f0fb1e00e6bec62105b686 1280 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 913 983 9.4E-22 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS26870 dcf64c2e19987f934f97f95243b89b51 69 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 2.9E-17 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AM474_RS26870 dcf64c2e19987f934f97f95243b89b51 69 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 45 1.1E-21 T 29-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 Pfam PF01386 Ribosomal L25p family 6 94 5.4E-27 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 97 1.0E-45 T 29-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 190 7.7E-29 T 29-03-2018 IPR020057 Ribosomal protein L25, beta domain AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 SUPERFAMILY SSF50715 4 196 1.74E-55 T 29-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 175 1.9E-45 T 29-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 Gene3D G3DSA:2.40.240.10 3 97 6.7E-30 T 29-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 30.687 T 29-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM474_RS19950 60511091fa58cb0e3e49ffe818a9741b 204 Gene3D G3DSA:2.170.120.20 101 195 1.7E-29 T 29-03-2018 IPR020057 Ribosomal protein L25, beta domain AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 185 1.2E-24 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 Gene3D G3DSA:3.40.47.10 1 160 4.2E-30 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 SUPERFAMILY SSF53901 8 323 1.83E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 322 63.647 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 322 4.8E-99 T 29-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 322 2.7E-32 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS06000 5c9370c1fd23f1ce52bf7198911d4a86 330 Gene3D G3DSA:3.40.47.10 161 322 6.7E-40 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 SMART SM00382 358 543 2.2E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 SUPERFAMILY SSF52540 324 557 1.78E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 SUPERFAMILY SSF90123 8 324 3.53E-45 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 Gene3D G3DSA:3.40.50.300 329 572 2.3E-60 T 29-03-2018 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 18 556 7.7E-232 T 29-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 Pfam PF00664 ABC transporter transmembrane region 28 283 4.5E-14 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 Gene3D G3DSA:1.20.1560.10 2 318 6.1E-25 T 29-03-2018 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 Pfam PF00005 ABC transporter 349 496 8.5E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06425 b4c3ca164ee2a5931ae12b747a623778 596 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS15160 a0244390bb891223c0b13a011574e513 194 Pfam PF09335 SNARE associated Golgi protein 51 155 3.2E-8 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS25670 416b3018c2b7e3df8e10a412d5b11319 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 21 93 3.9E-17 T 29-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM474_RS25670 416b3018c2b7e3df8e10a412d5b11319 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 1.0E-33 T 29-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 AM474_RS12765 d0ac014d0a4b0140b2de5cbd2c8406da 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 194 8.6E-91 T 29-03-2018 IPR010743 Methionine biosynthesis MetW AM474_RS12765 d0ac014d0a4b0140b2de5cbd2c8406da 206 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 9.0E-92 T 29-03-2018 IPR010743 Methionine biosynthesis MetW AM474_RS12765 d0ac014d0a4b0140b2de5cbd2c8406da 206 SUPERFAMILY SSF53335 3 192 7.86E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS12765 d0ac014d0a4b0140b2de5cbd2c8406da 206 Gene3D G3DSA:3.40.50.150 1 188 2.5E-22 T 29-03-2018 AM474_RS31535 b77ffc54d58ac26032d0738c88a396a9 331 Gene3D G3DSA:2.60.120.10 115 198 0.076 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS31535 b77ffc54d58ac26032d0738c88a396a9 331 Pfam PF04773 FecR protein 122 211 2.2E-19 T 29-03-2018 IPR006860 FecR protein AM474_RS31535 b77ffc54d58ac26032d0738c88a396a9 331 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 9.7E-14 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS31535 b77ffc54d58ac26032d0738c88a396a9 331 PIRSF PIRSF018266 5 327 1.0E-89 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 288 8.4E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 Gene3D G3DSA:3.50.50.60 210 313 1.3E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 SUPERFAMILY SSF51905 196 307 6.62E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 SUPERFAMILY SSF51905 1 160 6.62E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.5E-16 T 29-03-2018 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 8.5E-16 T 29-03-2018 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-16 T 29-03-2018 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 8.5E-16 T 29-03-2018 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 Gene3D G3DSA:3.40.50.720 132 209 0.19 T 29-03-2018 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PIRSF PIRSF037495 1 416 1.7E-104 T 29-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 Gene3D G3DSA:3.50.50.60 5 131 8.0E-19 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.2E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 2.2E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 2.2E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS25390 eba59edcdd97b41af2187903ee49108d 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 2.2E-10 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS11765 7cfc86ae8aa1bf52f73632ce4b0b145b 835 SMART SM00382 521 693 2.5E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS11765 7cfc86ae8aa1bf52f73632ce4b0b145b 835 Gene3D G3DSA:1.20.1170.10 185 500 2.1E-7 T 29-03-2018 AM474_RS11765 7cfc86ae8aa1bf52f73632ce4b0b145b 835 Gene3D G3DSA:3.40.50.300 510 684 3.6E-12 T 29-03-2018 AM474_RS11765 7cfc86ae8aa1bf52f73632ce4b0b145b 835 SUPERFAMILY SSF52540 525 684 2.76E-12 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11765 7cfc86ae8aa1bf52f73632ce4b0b145b 835 Pfam PF07728 AAA domain (dynein-related subfamily) 526 677 1.1E-6 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM474_RS13885 4b9ff941a12f8c0834959ed2add950d4 161 Pfam PF01584 CheW-like domain 15 151 2.0E-35 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13885 4b9ff941a12f8c0834959ed2add950d4 161 SUPERFAMILY SSF50341 13 153 1.07E-39 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13885 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.30.30.40 97 142 9.7E-16 T 29-03-2018 AM474_RS13885 4b9ff941a12f8c0834959ed2add950d4 161 SMART SM00260 11 148 1.5E-41 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS13885 4b9ff941a12f8c0834959ed2add950d4 161 Gene3D G3DSA:2.40.50.180 32 96 1.2E-19 T 29-03-2018 AM474_RS29255 4950aa16fcd260709a77e839793b7a53 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 3.7E-36 T 29-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM474_RS29255 4950aa16fcd260709a77e839793b7a53 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 91 26.775 T 29-03-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 AM474_RS29255 4950aa16fcd260709a77e839793b7a53 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 88 1.2E-15 T 29-03-2018 IPR008792 Coenzyme PQQ synthesis D AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PIRSF PIRSF019574 1 363 3.8E-131 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 Gene3D G3DSA:3.40.190.10 17 202 4.1E-31 T 29-03-2018 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 8.5E-65 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 Pfam PF13416 Bacterial extracellular solute-binding protein 39 328 4.9E-33 T 29-03-2018 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 SUPERFAMILY SSF53850 26 362 3.67E-97 T 29-03-2018 AM474_RS01410 034fd32b5c2bb9cb392af8f6e5817e5e 363 Gene3D G3DSA:3.40.190.10 203 349 5.1E-16 T 29-03-2018 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 1.6E-24 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 SMART SM00862 156 232 3.4E-26 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 SMART SM00448 6 116 4.6E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 Gene3D G3DSA:1.10.10.10 130 235 2.9E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 Pfam PF00072 Response regulator receiver domain 8 117 4.1E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 Gene3D G3DSA:3.40.50.2300 1 129 6.9E-34 T 29-03-2018 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 SUPERFAMILY SSF46894 133 233 1.11E-28 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS24725 fd1ff87f1394d7a56d0b2157e35581cf 236 SUPERFAMILY SSF52172 5 126 6.12E-38 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS21680 9743532fde79d4c180a00a39ee5d9e63 196 SMART SM00867 20 189 7.3E-19 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21680 9743532fde79d4c180a00a39ee5d9e63 196 Gene3D G3DSA:2.40.128.110 16 196 1.2E-23 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21680 9743532fde79d4c180a00a39ee5d9e63 196 SUPERFAMILY SSF101874 19 188 4.45E-22 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21680 9743532fde79d4c180a00a39ee5d9e63 196 Pfam PF04264 YceI-like domain 21 162 6.2E-13 T 29-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AM474_RS21680 9743532fde79d4c180a00a39ee5d9e63 196 PIRSF PIRSF029811 1 191 5.8E-69 T 29-03-2018 IPR027016 Uncharacterised protein with YceI domain AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 SUPERFAMILY SSF69349 444 626 1.1E-37 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 SUPERFAMILY SSF69279 184 366 1.87E-44 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 524 1.4E-204 T 29-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 Pfam PF05954 Phage late control gene D protein (GPD) 29 322 2.8E-79 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 SUPERFAMILY SSF69279 10 184 7.37E-57 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 SUPERFAMILY SSF69255 366 454 1.33E-34 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 22 506 1.4E-126 T 29-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 Gene3D G3DSA:3.55.50.10 95 188 3.7E-31 T 29-03-2018 AM474_RS27480 c40fac698a90752a1df163546c1e8f3c 680 Gene3D G3DSA:2.40.50.230 372 454 1.4E-39 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS17945 e80d2870679ddcbef02bbe88ff4c5e42 187 Pfam PF06252 Protein of unknown function (DUF1018) 20 131 1.6E-20 T 29-03-2018 IPR009363 Bacteriophage Mu, Gp16 AM474_RS17375 c5e8181700bd9b53e3522e843a31ad1a 480 PIRSF PIRSF002744 1 464 2.7E-100 T 29-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AM474_RS17375 c5e8181700bd9b53e3522e843a31ad1a 480 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 440 1.2E-45 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM474_RS14835 81dd811d385bf899ab81dd043ca79661 257 SMART SM00563 76 190 3.8E-31 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS14835 81dd811d385bf899ab81dd043ca79661 257 Gene3D G3DSA:3.40.1130.10 34 252 2.7E-41 T 29-03-2018 AM474_RS14835 81dd811d385bf899ab81dd043ca79661 257 SUPERFAMILY SSF69593 15 240 4.58E-36 T 29-03-2018 AM474_RS14835 81dd811d385bf899ab81dd043ca79661 257 Pfam PF01553 Acyltransferase 63 187 8.8E-23 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 262 288 - T 29-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Gene3D G3DSA:1.10.510.10 378 442 1.0E-9 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Pfam PF12799 Leucine Rich repeats (2 copies) 90 128 1.8E-6 T 29-03-2018 IPR025875 Leucine rich repeat 4 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Gene3D G3DSA:3.80.10.10 51 156 4.7E-17 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Pfam PF07714 Protein tyrosine kinase 258 418 3.1E-10 T 29-03-2018 IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain GO:0004672|GO:0006468 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00369 157 179 16.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00369 90 111 4.7 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00369 181 201 70.0 T 29-03-2018 IPR003591 Leucine-rich repeat, typical subtype AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Gene3D G3DSA:3.80.10.10 157 252 4.5E-15 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 Gene3D G3DSA:3.30.200.20 253 377 8.9E-8 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SUPERFAMILY SSF56112 252 486 1.35E-21 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00364 181 197 290.0 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00364 201 220 360.0 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00364 156 175 6.9 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00364 224 243 120.0 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SMART SM00364 88 107 55.0 T 29-03-2018 AM474_RS32160 f322b5aa46efafcb61931396927dab7d 499 SUPERFAMILY SSF52058 63 238 1.77E-30 T 29-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like AM474_RS04020 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Gene3D G3DSA:3.20.10.10 112 271 6.9E-43 T 29-03-2018 AM474_RS04020 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Gene3D G3DSA:3.30.470.10 2 111 7.4E-28 T 29-03-2018 AM474_RS04020 89c0ae1e9939ded0de3b8ae0b87e9d07 271 SUPERFAMILY SSF56752 4 263 5.62E-74 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM474_RS04020 89c0ae1e9939ded0de3b8ae0b87e9d07 271 Pfam PF01063 Amino-transferase class IV 25 246 1.8E-48 T 29-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 AM474_RS04020 89c0ae1e9939ded0de3b8ae0b87e9d07 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 263 8.4E-89 T 29-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 173 262 2.2E-23 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 263 342 1.9E-15 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 PIRSF PIRSF006076 1 788 1.3E-266 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 91 172 1.8E-15 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 349 387 0.012 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF01103 Surface antigen 447 788 9.2E-97 T 29-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:2.40.160.50 388 788 5.1E-92 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Gene3D G3DSA:3.10.20.310 19 90 2.2E-7 T 29-03-2018 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 265 343 4.2E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 92 171 1.8E-13 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 175 262 2.3E-17 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Pfam PF07244 Surface antigen variable number repeat 347 420 1.0E-15 T 29-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 788 25.933 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM474_RS07600 5f69e5294f5649bcf9543c3a34af02d6 788 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 788 8.3E-267 T 29-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 Gene3D G3DSA:3.40.190.10 206 335 3.7E-18 T 29-03-2018 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 Gene3D G3DSA:3.40.190.10 21 205 4.5E-30 T 29-03-2018 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 SUPERFAMILY SSF53850 24 362 2.82E-99 T 29-03-2018 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 175 194 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 152 166 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 212 231 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 121 137 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 307 333 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 4.5E-64 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 PIRSF PIRSF019574 2 363 2.7E-132 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS26110 36c3e4230a9b3f741a21ff2665a0f704 363 Pfam PF13416 Bacterial extracellular solute-binding protein 40 328 7.8E-31 T 29-03-2018 AM474_RS07285 65952213c8573602d8832ec163150aad 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.7E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07285 65952213c8573602d8832ec163150aad 306 Gene3D G3DSA:3.40.190.10 89 180 1.3E-20 T 29-03-2018 AM474_RS07285 65952213c8573602d8832ec163150aad 306 SUPERFAMILY SSF46785 1 112 8.84E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07285 65952213c8573602d8832ec163150aad 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07285 65952213c8573602d8832ec163150aad 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07285 65952213c8573602d8832ec163150aad 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS07285 65952213c8573602d8832ec163150aad 306 Gene3D G3DSA:3.40.190.10 181 268 1.7E-14 T 29-03-2018 AM474_RS07285 65952213c8573602d8832ec163150aad 306 SUPERFAMILY SSF53850 88 287 5.43E-36 T 29-03-2018 AM474_RS07285 65952213c8573602d8832ec163150aad 306 Gene3D G3DSA:1.10.10.10 1 84 5.0E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07285 65952213c8573602d8832ec163150aad 306 Pfam PF03466 LysR substrate binding domain 88 287 4.0E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 SUPERFAMILY SSF51215 31 157 3.79E-16 T 29-03-2018 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 SUPERFAMILY SSF46689 176 225 8.51E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 Gene3D G3DSA:1.10.10.60 182 233 5.7E-19 T 29-03-2018 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 Gene3D G3DSA:2.60.120.280 13 181 5.3E-10 T 29-03-2018 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 Gene3D G3DSA:1.10.10.60 234 284 1.9E-13 T 29-03-2018 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 SUPERFAMILY SSF46689 226 274 3.54E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 SMART SM00342 190 272 1.6E-32 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 Pfam PF02311 AraC-like ligand binding domain 19 151 7.0E-27 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS05645 88c4acaa4d212bc884c839c520fc8fbd 284 Pfam PF12833 Helix-turn-helix domain 196 273 3.1E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 Gene3D G3DSA:3.40.50.300 315 568 4.9E-60 T 29-03-2018 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 SUPERFAMILY SSF90123 16 318 1.83E-25 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 SUPERFAMILY SSF52540 325 560 1.09E-65 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10965 e98a00126b558e658df333a0f357674c 574 Gene3D G3DSA:1.20.1560.10 3 311 3.3E-17 T 29-03-2018 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 Pfam PF00005 ABC transporter 344 493 1.2E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10965 e98a00126b558e658df333a0f357674c 574 SMART SM00382 353 537 4.9E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18405 4a1e50c7ea0913e5790c5b507e7b3ce7 503 SUPERFAMILY SSF109604 235 246 1.16E-18 T 29-03-2018 AM474_RS18405 4a1e50c7ea0913e5790c5b507e7b3ce7 503 SUPERFAMILY SSF109604 13 206 1.16E-18 T 29-03-2018 AM474_RS18405 4a1e50c7ea0913e5790c5b507e7b3ce7 503 Gene3D G3DSA:1.10.3210.10 1 269 2.8E-10 T 29-03-2018 AM474_RS18405 4a1e50c7ea0913e5790c5b507e7b3ce7 503 Pfam PF08668 HDOD domain 17 200 3.0E-13 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 193 1.7E-34 T 29-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 262 1.7E-103 T 29-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 SUPERFAMILY SSF100939 2 259 1.63E-51 T 29-03-2018 IPR016194 SPOC-like, C-terminal domain AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 PIRSF PIRSF006493 1 292 1.2E-105 T 29-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 Gene3D G3DSA:2.40.290.10 2 183 4.0E-30 T 29-03-2018 IPR016194 SPOC-like, C-terminal domain AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 SMART SM00559 53 181 6.4E-49 T 29-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 AM474_RS30085 5088f8d43852a9be825af4867b91ec29 293 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 260 32.037 T 29-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type AM474_RS10605 122f90bc93b3111b12928ea3041d5d5f 248 Pfam PF01810 LysE type translocator 59 240 1.5E-16 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS26690 2257b730ccedd69223f7343a2ebcfa78 169 Gene3D G3DSA:2.60.120.480 2 169 1.3E-55 T 29-03-2018 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM474_RS26690 2257b730ccedd69223f7343a2ebcfa78 169 PIRSF PIRSF017306 2 162 1.6E-49 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM474_RS26690 2257b730ccedd69223f7343a2ebcfa78 169 SUPERFAMILY SSF51182 1 162 3.47E-58 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS26690 2257b730ccedd69223f7343a2ebcfa78 169 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 163 42.469 T 29-03-2018 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM474_RS26690 2257b730ccedd69223f7343a2ebcfa78 169 Pfam PF04115 Ureidoglycolate lyase 2 158 2.9E-53 T 29-03-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 7 239 1.5E-66 T 29-03-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 Gene3D G3DSA:3.30.950.10 149 225 1.2E-6 T 29-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 221 9.9E-48 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 Gene3D G3DSA:3.40.1010.10 6 148 4.3E-28 T 29-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 PIRSF PIRSF036427 5 246 1.1E-69 T 29-03-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 AM474_RS03705 0f7c971057528f90f2a4bb54ab3136e9 250 SUPERFAMILY SSF53790 2 240 1.83E-49 T 29-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 454 3.2E-101 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 Gene3D G3DSA:3.40.190.10 205 301 7.7E-26 T 29-03-2018 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 PIRSF PIRSF002741 22 535 3.1E-117 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 Gene3D G3DSA:3.10.105.10 302 507 3.8E-63 T 29-03-2018 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 SUPERFAMILY SSF53850 32 534 1.99E-151 T 29-03-2018 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 Gene3D G3DSA:3.90.76.10 39 204 7.0E-37 T 29-03-2018 AM474_RS20905 354cfcfaba61a6c3b9799adc43a5c308 537 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 29-03-2018 IPR023765 Solute-binding protein family 5, conserved site AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Pfam PF08335 GlnD PII-uridylyltransferase 185 323 5.3E-37 T 29-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Pfam PF01842 ACT domain 816 873 1.6E-7 T 29-03-2018 IPR002912 ACT domain AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 SUPERFAMILY SSF55021 813 879 6.66E-11 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Gene3D G3DSA:1.10.3090.10 384 646 4.0E-39 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 SUPERFAMILY SSF81301 8 181 2.67E-24 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Pfam PF01909 Nucleotidyltransferase domain 72 114 1.0E-7 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 SUPERFAMILY SSF109604 426 591 2.48E-14 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 PIRSF PIRSF006288 12 892 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 SMART SM00471 457 604 1.3E-9 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Gene3D G3DSA:3.30.70.260 811 892 2.0E-11 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Gene3D G3DSA:3.30.70.260 693 781 7.0E-4 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Gene3D G3DSA:3.30.460.10 26 177 3.2E-29 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 SUPERFAMILY SSF81593 205 314 1.41E-12 T 29-03-2018 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 345.754 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Pfam PF01966 HD domain 463 569 2.1E-10 T 29-03-2018 IPR006674 HD domain AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 36 885 0.0 T 29-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AM474_RS07650 ec6c752053cb097f27209e8649692d35 900 Gene3D G3DSA:1.20.120.330 183 328 1.8E-26 T 29-03-2018 AM474_RS14450 b82799cf868a597956b7893df6e9ec44 352 Gene3D G3DSA:3.20.20.70 34 309 1.2E-27 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS14450 b82799cf868a597956b7893df6e9ec44 352 SUPERFAMILY SSF102114 48 261 2.09E-12 T 29-03-2018 AM474_RS14450 b82799cf868a597956b7893df6e9ec44 352 Pfam PF04055 Radical SAM superfamily 67 245 2.9E-13 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS14450 b82799cf868a597956b7893df6e9ec44 352 SMART SM00729 63 288 9.4E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS03560 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:3.40.50.300 16 181 1.4E-23 T 29-03-2018 AM474_RS03560 19b616e5f700db85a315d1e41ab27784 305 PIRSF PIRSF002849 1 304 2.1E-119 T 29-03-2018 AM474_RS03560 19b616e5f700db85a315d1e41ab27784 305 Gene3D G3DSA:1.10.8.300 196 302 3.4E-27 T 29-03-2018 AM474_RS03560 19b616e5f700db85a315d1e41ab27784 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 1.0E-61 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AM474_RS03560 19b616e5f700db85a315d1e41ab27784 305 SUPERFAMILY SSF52540 8 282 4.31E-42 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Gene3D G3DSA:1.20.120.330 613 777 5.1E-5 T 29-03-2018 AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Gene3D G3DSA:1.20.120.330 789 922 0.0019 T 29-03-2018 AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 SUPERFAMILY SSF52540 1 235 5.06E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 SUPERFAMILY SSF52540 311 375 5.06E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Gene3D G3DSA:3.40.50.300 1 264 1.4E-30 T 29-03-2018 AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Gene3D G3DSA:3.40.50.300 923 1210 7.1E-18 T 29-03-2018 AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 SUPERFAMILY SSF52540 892 991 7.11E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 SUPERFAMILY SSF52540 1059 1203 7.11E-18 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Pfam PF13476 AAA domain 6 331 2.5E-25 T 29-03-2018 AM474_RS22005 d4536648069b08ca51da9defc1470913 1211 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1100 1169 2.4E-12 T 29-03-2018 AM474_RS27770 d8c990a47abf17ccc85615887163d034 145 Gene3D G3DSA:3.30.1460.10 47 130 2.8E-10 T 29-03-2018 AM474_RS27770 d8c990a47abf17ccc85615887163d034 145 Pfam PF05932 Tir chaperone protein (CesT) family 9 126 2.0E-24 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AM474_RS27770 d8c990a47abf17ccc85615887163d034 145 Gene3D G3DSA:1.10.287.390 7 39 5.1E-15 T 29-03-2018 AM474_RS27770 d8c990a47abf17ccc85615887163d034 145 SUPERFAMILY SSF69635 4 129 5.23E-28 T 29-03-2018 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02080 TrkA-C domain 389 450 2.8E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02080 TrkA-C domain 156 221 2.6E-12 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02254 TrkA-N domain 3 105 1.4E-26 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Pfam PF02254 TrkA-N domain 234 349 2.6E-23 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF116726 361 436 4.19E-9 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF51735 1 150 9.86E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.30.70.1450 366 457 8.6E-19 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF116726 135 221 1.15E-11 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.30.70.1450 140 229 2.0E-17 T 29-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-30 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-30 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-30 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-30 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-30 T 29-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.40.50.720 230 348 1.1E-20 T 29-03-2018 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 Gene3D G3DSA:3.40.50.720 1 139 6.0E-26 T 29-03-2018 AM474_RS14780 c8a4077bcb25411999c4693f7bf1fec9 457 SUPERFAMILY SSF51735 231 375 1.84E-32 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 3.6E-26 T 29-03-2018 AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 SUPERFAMILY SSF51735 6 232 1.84E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 Gene3D G3DSA:3.40.50.720 5 234 2.9E-43 T 29-03-2018 AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.0E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06580 f51a199ddffcbf96dfbd28cdb18200ce 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS30595 04c53773e0998d5c5b381f823122ea7f 179 Pfam PF13276 HTH-like domain 28 80 1.7E-11 T 29-03-2018 IPR025948 HTH-like domain AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 Gene3D G3DSA:1.10.760.10 12 113 1.5E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 92 2.9E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 Pfam PF02239 Cytochrome D1 heme domain 129 484 2.9E-149 T 29-03-2018 AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 Gene3D G3DSA:2.140.10.20 114 487 5.2E-78 T 29-03-2018 AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 SUPERFAMILY SSF51004 102 485 5.62E-90 T 29-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AM474_RS12145 46a09920d9e3ca87f72c5a2c3e7a9f94 493 SUPERFAMILY SSF46626 7 111 3.39E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 SUPERFAMILY SSF101790 278 372 6.7E-25 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Gene3D G3DSA:3.30.1360.120 134 234 1.0E-30 T 29-03-2018 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 363 5.8E-22 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 PIRSF PIRSF006487 1 373 7.0E-83 T 29-03-2018 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Gene3D G3DSA:3.30.1360.120 6 133 4.6E-34 T 29-03-2018 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 257 1.2E-90 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Gene3D G3DSA:4.10.1250.10 235 283 2.7E-20 T 29-03-2018 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 Gene3D G3DSA:2.40.30.110 286 373 2.0E-21 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 367 5.1E-107 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM474_RS31810 de6d038476c935dfee055d54615eb3e1 373 SUPERFAMILY SSF103025 6 286 1.88E-91 T 29-03-2018 AM474_RS29270 8e34a874f00a42364c9881ab5fa0c121 387 SUPERFAMILY SSF56796 11 384 2.75E-118 T 29-03-2018 AM474_RS29270 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:3.40.50.1970 14 187 7.3E-46 T 29-03-2018 AM474_RS29270 8e34a874f00a42364c9881ab5fa0c121 387 Gene3D G3DSA:1.20.1090.10 189 387 4.3E-55 T 29-03-2018 AM474_RS29270 8e34a874f00a42364c9881ab5fa0c121 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM474_RS29270 8e34a874f00a42364c9881ab5fa0c121 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 15 379 5.1E-115 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM474_RS13650 5cafcb1244703d008a8f9d5fa124c336 260 Gene3D G3DSA:3.40.1080.10 1 254 3.8E-53 T 29-03-2018 AM474_RS13650 5cafcb1244703d008a8f9d5fa124c336 260 Pfam PF01144 Coenzyme A transferase 8 217 1.1E-48 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS13650 5cafcb1244703d008a8f9d5fa124c336 260 SUPERFAMILY SSF100950 2 245 5.15E-72 T 29-03-2018 AM474_RS13650 5cafcb1244703d008a8f9d5fa124c336 260 SMART SM00882 8 217 7.8E-40 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 2.9E-78 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 37.299 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 Pfam PF00696 Amino acid kinase family 28 274 7.7E-44 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 2.7E-8 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.7E-8 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 2.7E-8 T 29-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 PIRSF PIRSF000728 13 297 2.5E-111 T 29-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 SUPERFAMILY SSF53633 8 298 1.19E-98 T 29-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase AM474_RS16195 0565399fdd6a16dabdfefb209db00a2c 301 Gene3D G3DSA:3.40.1160.10 9 299 2.4E-72 T 29-03-2018 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF04542 Sigma-70 region 2 15 80 2.2E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88659 105 164 1.26E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.10.10 74 166 1.9E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 Gene3D G3DSA:1.10.1740.10 2 73 1.4E-17 T 29-03-2018 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 SUPERFAMILY SSF88946 10 100 5.89E-15 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 Pfam PF08281 Sigma-70, region 4 111 163 3.9E-14 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS09225 1c9a484b4795e194b7546760c98ed97e 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 162 1.3E-19 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 Gene3D G3DSA:1.10.10.10 7 94 8.6E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 Gene3D G3DSA:3.40.190.10 99 183 1.1E-14 T 29-03-2018 AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 SUPERFAMILY SSF46785 10 122 2.79E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 65 2.7E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 Gene3D G3DSA:3.40.190.10 184 251 9.1E-8 T 29-03-2018 AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 SUPERFAMILY SSF53850 100 293 2.35E-26 T 29-03-2018 AM474_RS30950 4ed91f51b74b37a423f260af4a0f53c7 298 Pfam PF03466 LysR substrate binding domain 99 293 2.1E-28 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 SUPERFAMILY SSF55781 71 228 4.64E-21 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 Gene3D G3DSA:3.30.450.40 81 246 1.1E-21 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 SMART SM00346 13 103 2.6E-17 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 Pfam PF01614 Bacterial transcriptional regulator 135 235 3.2E-7 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 Pfam PF09339 IclR helix-turn-helix domain 15 66 6.1E-15 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 SUPERFAMILY SSF46785 13 87 3.56E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10660 c835dc9ca957d5048d3a33234efd5fe8 262 Gene3D G3DSA:1.10.10.10 11 76 1.2E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF47781 202 256 8.23E-6 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 Gene3D G3DSA:1.10.40.60 106 216 1.3E-29 T 29-03-2018 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 PIRSF PIRSF002786 1 316 3.7E-76 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF158544 108 214 1.7E-25 T 29-03-2018 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 Pfam PF03934 Type II secretion system (T2SS), protein K 30 307 8.2E-87 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 Gene3D G3DSA:1.10.40.60 217 271 1.3E-10 T 29-03-2018 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF54523 275 314 2.04E-17 T 29-03-2018 AM474_RS04720 ec6d2dee918267b0a4c46d26ad47ae91 333 SUPERFAMILY SSF54523 38 107 2.04E-17 T 29-03-2018 AM474_RS27550 4d4a29e0d262254ce4a0710a85266ece 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 1.2E-152 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS27550 4d4a29e0d262254ce4a0710a85266ece 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 441 5.2E-142 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 8.6E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 8.6E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 8.6E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 8.6E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 8.6E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 PIRSF PIRSF000126 8 258 1.0E-50 T 29-03-2018 AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 Pfam PF00106 short chain dehydrogenase 21 208 8.6E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 Gene3D G3DSA:3.40.50.720 20 279 1.4E-38 T 29-03-2018 AM474_RS00605 8605a3076d84491a92ed3a5acf55dd6d 280 SUPERFAMILY SSF51735 16 241 8.77E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS28985 898655ff560d1b3f0f641bdc8f0e668a 126 Pfam PF14263 Domain of unknown function (DUF4354) 1 123 1.9E-48 T 29-03-2018 IPR025581 Protein of unknown function DUF4354 AM474_RS28985 898655ff560d1b3f0f641bdc8f0e668a 126 Gene3D G3DSA:2.60.40.1240 32 119 6.8E-5 T 29-03-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain AM474_RS07540 6846301b4aecd2a86a8fbb98a1f823c5 281 Pfam PF00793 DAHP synthetase I family 9 273 2.3E-80 T 29-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS07540 6846301b4aecd2a86a8fbb98a1f823c5 281 Gene3D G3DSA:3.20.20.70 17 277 1.9E-65 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS07540 6846301b4aecd2a86a8fbb98a1f823c5 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 48.256 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS07540 6846301b4aecd2a86a8fbb98a1f823c5 281 SUPERFAMILY SSF51569 3 277 1.01E-101 T 29-03-2018 AM474_RS07540 6846301b4aecd2a86a8fbb98a1f823c5 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 1.4E-114 T 29-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 7.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.1E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 Gene3D G3DSA:1.10.10.60 2 42 4.2E-12 T 29-03-2018 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 Gene3D G3DSA:1.10.260.40 43 115 1.1E-6 T 29-03-2018 AM474_RS13275 55ade344a42f6ec7f097c55df37e9191 221 SUPERFAMILY SSF46689 11 82 1.59E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07950 3e8eda33d75a4bc30b719fa3ac5567c1 413 Gene3D G3DSA:1.20.1250.20 15 200 1.7E-23 T 29-03-2018 AM474_RS07950 3e8eda33d75a4bc30b719fa3ac5567c1 413 Gene3D G3DSA:1.20.1250.20 209 408 4.8E-18 T 29-03-2018 AM474_RS07950 3e8eda33d75a4bc30b719fa3ac5567c1 413 SUPERFAMILY SSF103473 8 395 8.63E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS07950 3e8eda33d75a4bc30b719fa3ac5567c1 413 Pfam PF07690 Major Facilitator Superfamily 25 333 1.4E-28 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 SUPERFAMILY SSF56349 90 306 2.94E-67 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 Gene3D G3DSA:3.90.15.10 93 238 3.5E-38 T 29-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 94 267 6.4E-28 T 29-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 134 153 4.0E-7 T 29-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 178 194 4.0E-7 T 29-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 243 257 4.0E-7 T 29-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 157 171 4.0E-7 T 29-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 SUPERFAMILY SSF55869 34 95 5.1E-23 T 29-03-2018 IPR035447 DNA topoisomerase I, N-terminal AM474_RS30830 997da7125b56f873672f9506f49818e5 333 Gene3D G3DSA:1.20.120.380 245 320 4.6E-20 T 29-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 AM474_RS30830 997da7125b56f873672f9506f49818e5 333 Gene3D G3DSA:3.30.66.10 27 92 7.3E-35 T 29-03-2018 IPR035447 DNA topoisomerase I, N-terminal AM474_RS20950 0e24f74596e8349540fd2c119c445fd5 263 Gene3D G3DSA:2.60.120.380 34 229 2.3E-4 T 29-03-2018 AM474_RS20950 0e24f74596e8349540fd2c119c445fd5 263 PIRSF PIRSF012281 1 262 1.0E-130 T 29-03-2018 IPR012039 Uncharacterised conserved protein UCP012281 AM474_RS20950 0e24f74596e8349540fd2c119c445fd5 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 248 1.2E-21 T 29-03-2018 IPR019220 Domain of unknown function DUF2135 AM474_RS14055 2cdffb49406477396419df190357d947 208 SUPERFAMILY SSF52309 40 197 2.08E-45 T 29-03-2018 AM474_RS14055 2cdffb49406477396419df190357d947 208 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 42 183 2.6E-49 T 29-03-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 Reactome: R-HSA-74259 AM474_RS14055 2cdffb49406477396419df190357d947 208 Gene3D G3DSA:3.40.50.450 33 208 3.7E-39 T 29-03-2018 AM474_RS21695 1c9b0bb3983ad4e36dff6d8e1949fe6e 494 SUPERFAMILY SSF75304 13 484 1.26E-125 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS21695 1c9b0bb3983ad4e36dff6d8e1949fe6e 494 Pfam PF01425 Amidase 35 466 1.6E-87 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS21695 1c9b0bb3983ad4e36dff6d8e1949fe6e 494 Gene3D G3DSA:3.90.1300.10 10 490 7.6E-124 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS21545 cd039ce804cc0c8c2310e681b46a0084 473 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 36 473 3.1E-140 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AM474_RS21545 cd039ce804cc0c8c2310e681b46a0084 473 SUPERFAMILY SSF46626 330 473 3.58E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS21545 cd039ce804cc0c8c2310e681b46a0084 473 PIRSF PIRSF028099 3 473 2.6E-190 T 29-03-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase AM474_RS21545 cd039ce804cc0c8c2310e681b46a0084 473 Gene3D G3DSA:1.10.760.10 75 290 0.031 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS21545 cd039ce804cc0c8c2310e681b46a0084 473 Gene3D G3DSA:1.10.760.10 312 473 3.3E-27 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 Gene3D G3DSA:3.40.50.150 4 186 1.3E-30 T 29-03-2018 AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 SUPERFAMILY SSF53335 318 410 3.77E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 SUPERFAMILY SSF53335 4 280 3.77E-52 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 401 2.3E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 176 189 5.6E-8 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 5.6E-8 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 123 137 5.6E-8 T 29-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AM474_RS08510 89f2b8d23b6139f72108a429ab3358d5 488 Gene3D G3DSA:3.90.120.10 187 398 2.8E-18 T 29-03-2018 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 SUPERFAMILY SSF50249 137 200 3.67E-22 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 Gene3D G3DSA:2.40.50.140 116 203 1.9E-25 T 29-03-2018 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 ProSitePatterns PS00352 'Cold-shock' domain signature. 151 169 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 SMART SM00357 139 202 6.5E-25 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 175 193 1.9E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 140 155 1.9E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 PRINTS PR00050 Cold shock protein signature 160 169 1.9E-15 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS23540 070ac70e6b60b40d5306f3185c1f66fd 204 Pfam PF00313 'Cold-shock' DNA-binding domain 139 200 1.6E-25 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS26295 64ff5065c25c5ea272dd3f0691144632 385 Gene3D G3DSA:2.40.50.100 40 98 2.5E-7 T 29-03-2018 AM474_RS26295 64ff5065c25c5ea272dd3f0691144632 385 Gene3D G3DSA:1.20.1600.10 99 284 4.1E-22 T 29-03-2018 AM474_RS26295 64ff5065c25c5ea272dd3f0691144632 385 SUPERFAMILY SSF111369 62 298 1.31E-52 T 29-03-2018 AM474_RS26295 64ff5065c25c5ea272dd3f0691144632 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 370 1.6E-73 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS26295 64ff5065c25c5ea272dd3f0691144632 385 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 291 1.5E-18 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS22465 044bf24d5c587b77af6e15062d44fff1 316 Pfam PF03888 MucB/RseB N-terminal domain 23 194 1.8E-55 T 29-03-2018 IPR033434 MucB/RseB, N-terminal AM474_RS22465 044bf24d5c587b77af6e15062d44fff1 316 Gene3D G3DSA:2.50.20.10 16 205 9.3E-25 T 29-03-2018 AM474_RS22465 044bf24d5c587b77af6e15062d44fff1 316 Pfam PF17188 MucB/RseB C-terminal domain 210 309 8.0E-24 T 29-03-2018 IPR033436 MucB/RseB, C-terminal AM474_RS22465 044bf24d5c587b77af6e15062d44fff1 316 PIRSF PIRSF005427 1 315 1.4E-97 T 29-03-2018 IPR005588 MucB/RseB AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 SMART SM00382 28 225 3.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 SUPERFAMILY SSF52540 4 248 1.66E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 PIRSF PIRSF039085 1 254 1.1E-116 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 Gene3D G3DSA:3.40.50.300 2 252 7.5E-69 T 29-03-2018 AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 Pfam PF00005 ABC transporter 19 178 5.4E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS23140 442fd7e135585db8a99b72b58f12cd72 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Gene3D G3DSA:3.30.413.10 409 557 8.6E-35 T 29-03-2018 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 2.0E-38 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 415 555 3.0E-12 T 29-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Gene3D G3DSA:3.90.480.10 53 200 1.3E-20 T 29-03-2018 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 SUPERFAMILY SSF55124 253 277 6.71E-28 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 SUPERFAMILY SSF55124 316 423 6.71E-28 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 SUPERFAMILY SSF55124 1 126 4.58E-31 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 SUPERFAMILY SSF56014 409 554 2.49E-41 T 29-03-2018 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 PRINTS PR00397 Sirohaem Fe-binding site signature 412 430 9.0E-5 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 PRINTS PR00397 Sirohaem Fe-binding site signature 458 476 9.0E-5 T 29-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 49 109 2.9E-18 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 347 398 1.0E-15 T 29-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 SUPERFAMILY SSF56014 120 286 2.88E-46 T 29-03-2018 AM474_RS10520 cb63f72b1e627c75a64ab836b3b972b6 557 Gene3D G3DSA:3.90.480.10 216 406 2.2E-31 T 29-03-2018 AM474_RS31715 6ef7fd664f53b2b2e62f17d73ccd105a 254 Pfam PF00975 Thioesterase domain 8 230 6.3E-53 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS31715 6ef7fd664f53b2b2e62f17d73ccd105a 254 Gene3D G3DSA:3.40.50.1820 7 236 2.0E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31715 6ef7fd664f53b2b2e62f17d73ccd105a 254 SUPERFAMILY SSF53474 8 232 1.24E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01695 c4c2cf99ad40caa98cb2493fcf9f1841 75 SUPERFAMILY SSF47413 4 70 4.5E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS01695 c4c2cf99ad40caa98cb2493fcf9f1841 75 Gene3D G3DSA:1.10.260.40 1 68 2.9E-15 T 29-03-2018 AM474_RS01695 c4c2cf99ad40caa98cb2493fcf9f1841 75 Pfam PF01381 Helix-turn-helix 12 64 3.3E-10 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS01695 c4c2cf99ad40caa98cb2493fcf9f1841 75 SMART SM00530 11 66 4.0E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS14805 334f2e19f7d0f239cc5539764050883c 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 285 1.4E-44 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM474_RS14805 334f2e19f7d0f239cc5539764050883c 295 PIRSF PIRSF026649 1 295 9.7E-90 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM474_RS16925 2e797c1d27015b75e0af5b26b158a77b 135 Pfam PF13488 Glycine zipper 77 119 3.0E-5 T 29-03-2018 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 Gene3D G3DSA:1.10.10.60 136 280 2.1E-10 T 29-03-2018 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 Pfam PF12833 Helix-turn-helix domain 249 328 3.4E-23 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 Pfam PF14525 AraC-binding-like domain 23 204 2.2E-36 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 322 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 SUPERFAMILY SSF46689 225 275 1.21E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 Gene3D G3DSA:1.10.10.60 281 333 1.7E-5 T 29-03-2018 AM474_RS32210 b0d6a953e0aefdfca3f47ac0b7cfe5d1 333 SMART SM00342 241 326 5.0E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS05925 f15a4dc437d25eb4e2687922dbba5470 692 Pfam PF05506 Domain of unknown function (DUF756) 590 672 7.1E-19 T 29-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS05925 f15a4dc437d25eb4e2687922dbba5470 692 Pfam PF05506 Domain of unknown function (DUF756) 490 577 4.7E-20 T 29-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS05925 f15a4dc437d25eb4e2687922dbba5470 692 Gene3D G3DSA:3.40.720.10 132 426 2.0E-19 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS05925 f15a4dc437d25eb4e2687922dbba5470 692 Pfam PF04185 Phosphoesterase family 48 422 1.1E-132 T 29-03-2018 IPR007312 Phosphoesterase GO:0016788 AM474_RS05925 f15a4dc437d25eb4e2687922dbba5470 692 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 686 2.3E-300 T 29-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 311 2.8E-35 T 29-03-2018 IPR020801 Polyketide synthase, acyl transferase domain AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 Gene3D G3DSA:3.40.366.10 177 312 8.9E-27 T 29-03-2018 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 Gene3D G3DSA:3.40.366.10 1 176 3.4E-51 T 29-03-2018 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 290 1.8E-111 T 29-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF52151 199 299 6.28E-73 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF52151 5 129 6.28E-73 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 Pfam PF00698 Acyl transferase domain 7 276 2.3E-41 T 29-03-2018 IPR014043 Acyl transferase AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 SUPERFAMILY SSF55048 129 198 3.01E-17 T 29-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AM474_RS04040 00b96f30f3d09013f48c28a65511a477 312 PIRSF PIRSF000446 2 311 6.6E-114 T 29-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM474_RS24825 ef72366235b28e851f319bf53fd2aa3f 55 Pfam PF06796 Periplasmic nitrate reductase protein NapE 2 53 1.4E-24 T 29-03-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE AM474_RS24825 ef72366235b28e851f319bf53fd2aa3f 55 TIGRFAM TIGR02973 nitrate_rd_NapE: periplasmic nitrate reductase, NapE protein 11 52 1.8E-23 T 29-03-2018 IPR004448 Nitrate reductas, NapE, periplasmic AM474_RS20165 ae0da557f840b2ff3b5b1005ee41c412 341 SUPERFAMILY SSF51735 15 263 3.44E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS20165 ae0da557f840b2ff3b5b1005ee41c412 341 SUPERFAMILY SSF51735 303 338 3.44E-42 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS20165 ae0da557f840b2ff3b5b1005ee41c412 341 Gene3D G3DSA:3.40.50.720 1 341 7.3E-50 T 29-03-2018 AM474_RS20165 ae0da557f840b2ff3b5b1005ee41c412 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 17 237 8.4E-15 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF55031 188 300 1.57E-30 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.40.630.10 273 392 1.2E-22 T 29-03-2018 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF53187 6 201 1.08E-87 T 29-03-2018 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 SUPERFAMILY SSF53187 302 389 1.08E-87 T 29-03-2018 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 Gene3D G3DSA:3.40.630.10 1 272 4.4E-71 T 29-03-2018 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 Pfam PF07687 Peptidase dimerisation domain 192 286 3.9E-11 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 Pfam PF01546 Peptidase family M20/M25/M40 77 385 4.4E-34 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 374 8.7E-108 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM474_RS21685 b312c96d30fea15509ee9a681590ac03 406 PIRSF PIRSF005962 4 391 8.1E-121 T 29-03-2018 IPR017439 Amidohydrolase GO:0016787 AM474_RS28620 10f585ea2ffad8986368bd43022e62ed 559 Pfam PF08774 VRR-NUC domain 443 555 4.8E-33 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AM474_RS28620 10f585ea2ffad8986368bd43022e62ed 559 SMART SM00990 441 555 2.9E-49 T 29-03-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 TIGRFAM TIGR04051 rSAM_NirJ: heme d1 biosynthesis radical SAM protein NirJ 26 378 1.9E-186 T 29-03-2018 IPR023992 Heme D1 biosynthesis, radical SAM protein NirJ AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 Gene3D G3DSA:3.20.20.70 17 344 8.9E-51 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 SMART SM00729 27 230 5.8E-4 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 SUPERFAMILY SSF102114 23 351 2.09E-68 T 29-03-2018 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 PIRSF PIRSF037420 13 386 1.1E-139 T 29-03-2018 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 Pfam PF04055 Radical SAM superfamily 33 187 2.6E-25 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS12135 5a374e4e1973b445a1698598d7f72314 387 Pfam PF13353 4Fe-4S single cluster domain 28 138 2.5E-10 T 29-03-2018 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF00691 OmpA family 244 339 2.0E-24 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103647 198 232 4.84E-7 T 29-03-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF56925 45 188 6.54E-17 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 ProSitePatterns PS01068 OmpA-like domain. 276 321 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 244 266 7.4E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 289 305 7.4E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 PRINTS PR01021 OMPA domain signature 274 289 7.4E-18 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:2.40.160.20 13 195 1.5E-22 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 SUPERFAMILY SSF103088 235 345 3.27E-39 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 Gene3D G3DSA:3.30.1330.60 196 350 5.7E-44 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS28125 171eacef143b342c9f2b7bca29db9fc0 350 Pfam PF05736 OprF membrane domain 1 188 2.2E-97 T 29-03-2018 IPR008722 Outer membrane porin F, N-terminal AM474_RS03430 165951bfc8947a6ab4dd534759161fbb 142 SUPERFAMILY SSF82784 1 140 2.36E-47 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS03430 165951bfc8947a6ab4dd534759161fbb 142 Pfam PF02566 OsmC-like protein 44 138 4.4E-17 T 29-03-2018 IPR003718 OsmC/Ohr family AM474_RS03430 165951bfc8947a6ab4dd534759161fbb 142 Gene3D G3DSA:2.20.25.10 3 46 8.4E-21 T 29-03-2018 AM474_RS03430 165951bfc8947a6ab4dd534759161fbb 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 140 5.5E-57 T 29-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 AM474_RS03430 165951bfc8947a6ab4dd534759161fbb 142 Gene3D G3DSA:3.30.300.20 48 142 8.0E-24 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS01740 c792157d24fe24e125a8b15a2d7b8c04 381 PIRSF PIRSF006078 1 377 6.8E-133 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS01740 c792157d24fe24e125a8b15a2d7b8c04 381 Gene3D G3DSA:3.90.1510.10 42 275 1.5E-92 T 29-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 AM474_RS01740 c792157d24fe24e125a8b15a2d7b8c04 381 SUPERFAMILY SSF110738 1 375 3.4E-131 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS01740 c792157d24fe24e125a8b15a2d7b8c04 381 Pfam PF02595 Glycerate kinase family 3 374 2.0E-141 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS01740 c792157d24fe24e125a8b15a2d7b8c04 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.8E-149 T 29-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 AM474_RS08205 7ff4e1a367a647b01eef6c0961c1a814 418 PIRSF PIRSF006060 10 418 4.8E-11 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS08205 7ff4e1a367a647b01eef6c0961c1a814 418 Pfam PF03222 Tryptophan/tyrosine permease family 29 382 1.1E-28 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM474_RS07570 69ba1fd660bfb80dc370490483d7df47 201 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 192 39.545 T 29-03-2018 IPR022898 Ribonuclease HII GO:0004523 AM474_RS07570 69ba1fd660bfb80dc370490483d7df47 201 SUPERFAMILY SSF53098 13 197 2.73E-71 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS07570 69ba1fd660bfb80dc370490483d7df47 201 Pfam PF01351 Ribonuclease HII 15 191 1.8E-42 T 29-03-2018 IPR024567 Ribonuclease HII/HIII domain AM474_RS07570 69ba1fd660bfb80dc370490483d7df47 201 Gene3D G3DSA:3.30.420.10 7 200 2.9E-71 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 596 6.4E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Gene3D G3DSA:3.30.565.10 447 598 1.1E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 SUPERFAMILY SSF47384 366 442 1.9E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 SUPERFAMILY SSF103190 68 203 2.35E-19 T 29-03-2018 IPR029151 Periplasmic sensor domain-like AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 SUPERFAMILY SSF55874 437 595 9.43E-34 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 PIRSF PIRSF036431 4 605 2.3E-209 T 29-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 577 9.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 9.4E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 378 442 1.5E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Gene3D G3DSA:1.10.287.130 339 442 4.1E-10 T 29-03-2018 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Gene3D G3DSA:3.30.450.20 185 293 5.6E-9 T 29-03-2018 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 SMART SM00387 488 599 1.6E-24 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 SMART SM00388 378 446 4.9E-7 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Pfam PF02743 Cache domain 48 276 2.6E-15 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS17015 947852807f8df7dc72856ba2794079d8 612 Gene3D G3DSA:3.30.450.20 41 184 4.3E-19 T 29-03-2018 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-51 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 Gene3D G3DSA:3.30.420.40 1 144 3.6E-43 T 29-03-2018 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 2.2E-133 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 Gene3D G3DSA:3.30.420.40 145 293 3.6E-17 T 29-03-2018 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 SUPERFAMILY SSF53067 3 122 2.98E-32 T 29-03-2018 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 SUPERFAMILY SSF53067 101 313 1.5E-43 T 29-03-2018 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 62.54 T 29-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 Pfam PF00814 Glycoprotease family 24 311 3.7E-101 T 29-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS11725 5688e379263e546f05ba4025ac7a185c 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 2.0E-118 T 29-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 SUPERFAMILY SSF51206 17 149 3.14E-20 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 Gene3D G3DSA:2.60.120.10 12 154 5.9E-19 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 Pfam PF13545 Crp-like helix-turn-helix domain 160 229 3.8E-13 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 SUPERFAMILY SSF46785 157 231 3.5E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 Pfam PF00027 Cyclic nucleotide-binding domain 41 126 5.9E-11 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 SMART SM00100 22 140 4.0E-8 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS02705 139066086d0bfd08929ec679d829cec1 241 Gene3D G3DSA:1.10.10.10 155 232 6.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 SUPERFAMILY SSF53383 6 376 6.93E-97 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 29-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 Pfam PF00266 Aminotransferase class-V 7 367 1.2E-72 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 Gene3D G3DSA:3.90.1150.10 248 380 1.5E-27 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 PIRSF PIRSF005572 3 380 6.1E-108 T 29-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AM474_RS29625 f0215d4b6b486dd3d3cbf62d38411162 393 Gene3D G3DSA:3.40.640.10 14 247 5.0E-58 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS11735 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.10.410 92 148 4.0E-16 T 29-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AM474_RS11735 ba995d2ecf682c50e1c24b0e58bd431b 149 SUPERFAMILY SSF89095 4 148 1.26E-35 T 29-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AM474_RS11735 ba995d2ecf682c50e1c24b0e58bd431b 149 Pfam PF09424 Yqey-like protein 5 147 3.8E-49 T 29-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial AM474_RS11735 ba995d2ecf682c50e1c24b0e58bd431b 149 Gene3D G3DSA:1.10.1510.10 1 91 4.3E-24 T 29-03-2018 AM474_RS25635 35fb308a928e792be20878aa20b3a8b1 128 SUPERFAMILY SSF54427 4 127 9.25E-45 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS25635 35fb308a928e792be20878aa20b3a8b1 128 PIRSF PIRSF029394 1 128 1.1E-51 T 29-03-2018 IPR016918 Uncharacterised conserved protein UCP029394 AM474_RS25635 35fb308a928e792be20878aa20b3a8b1 128 Pfam PF14534 Domain of unknown function (DUF4440) 26 114 1.4E-6 T 29-03-2018 IPR027843 Domain of unknown function DUF4440 AM474_RS25635 35fb308a928e792be20878aa20b3a8b1 128 Gene3D G3DSA:3.10.450.50 4 126 9.1E-38 T 29-03-2018 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 SUPERFAMILY SSF53335 9 286 6.2E-55 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Pfam PF05175 Methyltransferase small domain 122 208 9.7E-16 T 29-03-2018 IPR007848 Methyltransferase small domain GO:0008168 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:1.10.8.10 7 94 3.6E-16 T 29-03-2018 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Gene3D G3DSA:3.40.50.150 95 273 1.3E-36 T 29-03-2018 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 PIRSF PIRSF037167 1 300 4.6E-140 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 293 52.859 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 6 287 5.9E-131 T 29-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 286 4.4E-80 T 29-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM474_RS27605 d0cf19afcc2f7e00f14c8cf6ceff2d4c 304 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.50.740 100 307 1.0E-38 T 29-03-2018 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Hamap MF_01630 Nitrate reductase [napA]. 1 831 29.255 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF00384 Molybdopterin oxidoreductase 98 571 1.7E-86 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 SMART SM00926 41 95 4.3E-9 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF01568 Molydopterin dinucleotide binding domain 717 825 6.0E-25 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 3 829 0.0 T 29-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 43 94 2.2E-14 T 29-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:2.40.40.20 672 830 4.8E-37 T 29-03-2018 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 SUPERFAMILY SSF50692 690 829 4.14E-42 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:2.20.25.90 37 99 3.2E-11 T 29-03-2018 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 SUPERFAMILY SSF53706 37 648 3.01E-201 T 29-03-2018 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 Gene3D G3DSA:3.40.50.740 308 671 9.5E-64 T 29-03-2018 AM474_RS24810 d9a0e9538c99708e393ecc48f3e729d8 834 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 29-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 AM474_RS00185 7bf62d70e947b8d98e627f171b9a9d31 200 Gene3D G3DSA:3.40.109.10 4 198 9.7E-27 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS00185 7bf62d70e947b8d98e627f171b9a9d31 200 Pfam PF00881 Nitroreductase family 9 177 2.1E-19 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS00185 7bf62d70e947b8d98e627f171b9a9d31 200 SUPERFAMILY SSF55469 5 199 8.38E-73 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 SUPERFAMILY SSF46689 262 312 2.24E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 Pfam PF12833 Helix-turn-helix domain 231 311 1.3E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 306 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 Gene3D G3DSA:1.10.10.60 207 263 2.6E-6 T 29-03-2018 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 1.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 1.8E-7 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 Gene3D G3DSA:1.10.10.60 264 313 5.1E-12 T 29-03-2018 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 SMART SM00342 225 310 1.5E-26 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10225 38140a25a03ee1d0d35e87e7d6ea98df 316 Pfam PF14525 AraC-binding-like domain 14 168 2.3E-10 T 29-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like AM474_RS18275 80ff1383b7cc0b1188b91861893211f8 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS18275 80ff1383b7cc0b1188b91861893211f8 263 SUPERFAMILY SSF52096 3 263 2.2E-76 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS18275 80ff1383b7cc0b1188b91861893211f8 263 Gene3D G3DSA:3.90.226.10 7 220 9.4E-62 T 29-03-2018 AM474_RS18275 80ff1383b7cc0b1188b91861893211f8 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 262 2.1E-50 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS18275 80ff1383b7cc0b1188b91861893211f8 263 Gene3D G3DSA:1.10.12.10 221 263 1.4E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS08490 f3759f520dc4cd369e63c7306c419410 168 Gene3D G3DSA:3.40.140.10 43 168 2.5E-47 T 29-03-2018 AM474_RS08490 f3759f520dc4cd369e63c7306c419410 168 TIGRFAM TIGR00608 radc: DNA repair protein RadC 27 168 4.3E-45 T 29-03-2018 IPR001405 RadC protein AM474_RS08490 f3759f520dc4cd369e63c7306c419410 168 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 117 122 - T 29-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM474_RS08490 f3759f520dc4cd369e63c7306c419410 168 SUPERFAMILY SSF102712 62 138 1.2E-6 T 29-03-2018 AM474_RS08490 f3759f520dc4cd369e63c7306c419410 168 Pfam PF04002 RadC-like JAB domain 47 166 1.4E-45 T 29-03-2018 IPR025657 RadC-like JAB domain AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 SUPERFAMILY SSF52540 1 239 1.06E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 SMART SM00382 30 217 2.5E-16 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 PIRSF PIRSF039085 1 244 6.0E-106 T 29-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 Gene3D G3DSA:3.40.50.300 1 243 4.1E-76 T 29-03-2018 AM474_RS17500 4db2d126b982d1d33df12921cde75035 244 Pfam PF00005 ABC transporter 22 169 8.4E-38 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Gene3D G3DSA:1.10.1200.10 521 602 5.3E-10 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Gene3D G3DSA:2.30.38.10 324 415 7.8E-18 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Pfam PF00501 AMP-binding enzyme 33 422 5.2E-63 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Gene3D G3DSA:3.40.50.980 23 172 7.9E-25 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Gene3D G3DSA:3.30.300.30 418 513 1.7E-19 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 SUPERFAMILY SSF56801 23 536 2.75E-107 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 SUPERFAMILY SSF47336 525 590 3.24E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Gene3D G3DSA:3.40.50.980 173 323 1.1E-30 T 29-03-2018 AM474_RS25085 25b25f89f7cd3662dae0c03bd0b854a4 618 Pfam PF00550 Phosphopantetheine attachment site 529 589 2.1E-5 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS23585 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 144 7.2E-30 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM474_RS23585 41c5d0e24ee9ae85e47a7c5ace7aa5af 146 TIGRFAM TIGR02801 tolR: protein TolR 11 144 2.4E-46 T 29-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 71 100 - T 29-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 SUPERFAMILY SSF54980 127 195 9.35E-11 T 29-03-2018 IPR035647 EF-G domain III/V-like AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 Gene3D G3DSA:3.30.230.30 1 125 9.4E-38 T 29-03-2018 IPR001498 Impact, N-terminal AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 SUPERFAMILY SSF54211 7 121 1.21E-37 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 Gene3D G3DSA:3.30.70.240 127 190 5.9E-13 T 29-03-2018 AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 Pfam PF09186 Domain of unknown function (DUF1949) 133 188 2.0E-11 T 29-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AM474_RS13930 255140947df4a056f6d217174ddab1c2 196 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 5.4E-27 T 29-03-2018 IPR001498 Impact, N-terminal AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 SUPERFAMILY SSF103473 237 408 1.96E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 SUPERFAMILY SSF103473 2 180 1.96E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 SUPERFAMILY SSF103473 460 485 1.96E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 Pfam PF07690 Major Facilitator Superfamily 5 398 1.1E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 Gene3D G3DSA:1.20.1250.20 241 490 2.9E-22 T 29-03-2018 AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 Gene3D G3DSA:1.20.1250.20 1 182 3.9E-24 T 29-03-2018 AM474_RS04940 409d69bbd80e81c39a4a61a238830353 499 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 480 1.2E-121 T 29-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 Gene3D G3DSA:3.90.79.10 1 131 1.8E-30 T 29-03-2018 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 PRINTS PR00502 NUDIX hydrolase family signature 32 46 7.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 PRINTS PR00502 NUDIX hydrolase family signature 46 61 7.5E-7 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 SUPERFAMILY SSF55811 4 128 1.76E-30 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS02075 af8aba33d8475c998bbd48f1a165b535 136 Pfam PF00293 NUDIX domain 5 120 4.4E-21 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 Gene3D G3DSA:2.60.40.420 113 278 1.0E-49 T 29-03-2018 IPR008972 Cupredoxin AM474_RS25655 98ef575027931689990727a36b97b2ab 331 SUPERFAMILY SSF49503 119 278 2.32E-49 T 29-03-2018 IPR008972 Cupredoxin AM474_RS25655 98ef575027931689990727a36b97b2ab 331 Gene3D G3DSA:1.10.287.90 27 112 1.2E-17 T 29-03-2018 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 PIRSF PIRSF000292 1 310 3.7E-137 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 Pfam PF06481 COX Aromatic Rich Motif 237 282 1.2E-15 T 29-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 SUPERFAMILY SSF81464 26 116 3.43E-23 T 29-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 217 4.9E-7 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25655 98ef575027931689990727a36b97b2ab 331 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 237 3.3E-117 T 29-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 SMART SM00486 150 557 1.6E-62 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 Gene3D G3DSA:3.30.420.10 153 349 8.0E-42 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 29-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 SUPERFAMILY SSF53098 5 391 7.59E-95 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 Pfam PF00136 DNA polymerase family B 379 740 8.9E-39 T 29-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 29-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 73 298 1.7E-11 T 29-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 SUPERFAMILY SSF56672 387 781 3.89E-113 T 29-03-2018 AM474_RS28730 81c67295f2913875a1a8fb23f5e21da8 787 Gene3D G3DSA:3.90.1600.10 391 603 5.6E-52 T 29-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS07275 66dc5873f22b739835c39ae55e7bb023 109 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 18 84 6.0E-27 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC AM474_RS07275 66dc5873f22b739835c39ae55e7bb023 109 Pfam PF06942 GlpM protein 2 108 1.1E-49 T 29-03-2018 IPR009707 Membrane protein GlpM/YdgC AM474_RS28570 a660e5804a2447e301191f02e39795ea 480 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 13 468 1.2E-213 T 29-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS28570 a660e5804a2447e301191f02e39795ea 480 SUPERFAMILY SSF81442 11 469 1.44E-118 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS28570 a660e5804a2447e301191f02e39795ea 480 Gene3D G3DSA:1.20.210.10 12 476 2.7E-91 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS28570 a660e5804a2447e301191f02e39795ea 480 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 446 6.9E-110 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS31680 942d207aa98cff337bbaffdf4526d4f6 286 PIRSF PIRSF006232 4 286 2.3E-92 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM474_RS31680 942d207aa98cff337bbaffdf4526d4f6 286 SUPERFAMILY SSF51182 11 284 8.19E-84 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS31680 942d207aa98cff337bbaffdf4526d4f6 286 Gene3D G3DSA:2.60.120.10 1 256 7.0E-80 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS31680 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF05726 Pirin C-terminal cupin domain 182 283 7.6E-30 T 29-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AM474_RS31680 942d207aa98cff337bbaffdf4526d4f6 286 Pfam PF02678 Pirin 21 127 2.6E-34 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 SUPERFAMILY SSF53850 24 243 3.07E-43 T 29-03-2018 AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 Pfam PF09084 NMT1/THI5 like 65 188 7.4E-11 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 Gene3D G3DSA:3.40.190.10 20 122 9.2E-13 T 29-03-2018 AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 305 2.7E-58 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 Gene3D G3DSA:3.40.190.10 123 312 7.5E-30 T 29-03-2018 AM474_RS00810 55d3fc2f2a593859801308263afd4154 318 SMART SM00062 25 239 2.2E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS16350 7d682305321e072ae7baa2d25e8959ed 349 SUPERFAMILY SSF56784 27 221 8.91E-12 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16350 7d682305321e072ae7baa2d25e8959ed 349 Gene3D G3DSA:3.40.50.1000 41 331 5.6E-6 T 29-03-2018 IPR023214 HAD-like domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.40.50.2300 1 131 8.6E-9 T 29-03-2018 AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 265 424 1.2E-14 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.30.450.20 132 252 1.8E-13 T 29-03-2018 AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF52172 6 142 3.7E-9 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00990 Diguanylate cyclase, GGDEF domain 268 422 8.4E-19 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00563 EAL domain 446 677 5.4E-58 T 29-03-2018 IPR001633 EAL domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF55785 131 251 5.76E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF141868 446 681 7.32E-53 T 29-03-2018 IPR001633 EAL domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.30.70.270 255 431 7.9E-33 T 29-03-2018 AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Pfam PF00989 PAS fold 147 249 1.0E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SMART SM00052 439 683 1.6E-38 T 29-03-2018 IPR001633 EAL domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 Gene3D G3DSA:3.20.20.450 441 689 1.0E-58 T 29-03-2018 IPR001633 EAL domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SUPERFAMILY SSF55073 273 430 4.87E-24 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 SMART SM00267 256 428 3.1E-22 T 29-03-2018 IPR000160 GGDEF domain AM474_RS18380 8e52756397cb089fff4b9edd6cfb1124 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 251 2.6E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS20695 7c5c7fefd7a621d02125bf7df2692ad9 209 SUPERFAMILY SSF52980 1 209 1.34E-126 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS20695 7c5c7fefd7a621d02125bf7df2692ad9 209 Pfam PF08682 Putative endonuclease, protein of unknown function (DUF1780) 2 209 3.0E-131 T 29-03-2018 IPR014796 Protein of unknown function DUF1780, putative endonuclease AM474_RS20695 7c5c7fefd7a621d02125bf7df2692ad9 209 Gene3D G3DSA:3.40.1540.10 3 201 5.0E-87 T 29-03-2018 IPR014796 Protein of unknown function DUF1780, putative endonuclease AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.10.60 1 46 1.1E-17 T 29-03-2018 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.2E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF46689 11 89 2.19E-19 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 9.1E-17 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 SUPERFAMILY SSF48498 97 201 2.25E-8 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.260.40 47 76 6.8E-14 T 29-03-2018 AM474_RS25640 0d76f4527097a54f6f5bb51e313c81d3 204 Gene3D G3DSA:1.10.357.10 77 204 2.2E-14 T 29-03-2018 AM474_RS14480 c17e9a8bddc9479bc993869d09f04967 375 PIRSF PIRSF029285 5 374 1.6E-178 T 29-03-2018 IPR014553 Predicted aminopeptidase AM474_RS14480 c17e9a8bddc9479bc993869d09f04967 375 Gene3D G3DSA:1.10.390.10 189 356 7.2E-4 T 29-03-2018 AM474_RS14480 c17e9a8bddc9479bc993869d09f04967 375 Pfam PF10023 Putative aminopeptidase 49 367 3.2E-134 T 29-03-2018 IPR014553 Predicted aminopeptidase AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 270 1.5E-16 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 SUPERFAMILY SSF111369 57 285 3.4E-25 T 29-03-2018 AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 Gene3D G3DSA:2.40.50.100 67 124 2.3E-17 T 29-03-2018 AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 Gene3D G3DSA:1.10.287.470 125 168 3.7E-12 T 29-03-2018 AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 362 4.9E-69 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS13990 07f7ddc7a5e4b2df8995f6dca380a03e 383 Gene3D G3DSA:2.40.50.100 170 365 1.6E-4 T 29-03-2018 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:3.40.190.10 93 199 1.2E-18 T 29-03-2018 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:1.10.10.10 2 89 5.0E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.8E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 Gene3D G3DSA:3.40.190.10 200 304 9.3E-4 T 29-03-2018 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 SUPERFAMILY SSF46785 7 87 2.81E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 SUPERFAMILY SSF53850 93 299 2.35E-41 T 29-03-2018 AM474_RS05940 64de42879a9325d2920f950babbdf63a 304 Pfam PF03466 LysR substrate binding domain 99 301 2.7E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 Gene3D G3DSA:3.40.50.1260 175 371 1.8E-75 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PIRSF PIRSF000724 1 387 1.3E-131 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 Gene3D G3DSA:3.40.50.1260 3 174 4.7E-60 T 29-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 SUPERFAMILY SSF53748 4 383 9.42E-144 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.873 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 29-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.0E-139 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS11920 b3c38088803d17d4a74eb4fb8dd1fd62 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 5.0E-80 T 29-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 Gene3D G3DSA:3.40.50.720 1 285 2.5E-113 T 29-03-2018 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 SUPERFAMILY SSF51735 2 286 5.51E-105 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 Gene3D G3DSA:1.10.1040.10 286 491 5.9E-67 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 443 1.2E-76 T 29-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 27 192 7.0E-47 T 29-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 SUPERFAMILY SSF48179 287 490 2.41E-61 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 PRINTS PR00084 Mannitol dehydrogenase signature 252 267 6.0E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 PRINTS PR00084 Mannitol dehydrogenase signature 222 235 6.0E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 PRINTS PR00084 Mannitol dehydrogenase signature 183 196 6.0E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 6.0E-21 T 29-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM474_RS31300 5a367f25162a837749e29cd0206b3be0 491 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 222 234 - T 29-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AM474_RS13370 f9c5f3cc3d94fb1b8ff9d13ecc50e512 171 Pfam PF06127 Protein of unknown function (DUF962) 1 143 1.4E-27 T 29-03-2018 IPR009305 Protein of unknown function DUF962 AM474_RS09285 d74b6dfc87ccd86873a03d9d402137c2 171 PIRSF PIRSF025550 1 171 2.2E-68 T 29-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AM474_RS09285 d74b6dfc87ccd86873a03d9d402137c2 171 SUPERFAMILY SSF55718 42 135 3.06E-17 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS09285 d74b6dfc87ccd86873a03d9d402137c2 171 Pfam PF02036 SCP-2 sterol transfer family 38 131 1.1E-14 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS09285 d74b6dfc87ccd86873a03d9d402137c2 171 Gene3D G3DSA:3.30.1050.10 26 138 8.5E-16 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS22875 e9363d19ce0f6bbb106f789eae8d03a3 406 Gene3D G3DSA:3.40.50.2000 195 360 1.2E-38 T 29-03-2018 AM474_RS22875 e9363d19ce0f6bbb106f789eae8d03a3 406 SUPERFAMILY SSF53756 7 378 8.22E-76 T 29-03-2018 AM474_RS22875 e9363d19ce0f6bbb106f789eae8d03a3 406 Pfam PF00534 Glycosyl transferases group 1 194 356 5.4E-23 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS22875 e9363d19ce0f6bbb106f789eae8d03a3 406 Pfam PF13439 Glycosyltransferase Family 4 18 183 7.1E-28 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS22875 e9363d19ce0f6bbb106f789eae8d03a3 406 Gene3D G3DSA:3.40.50.2000 5 194 4.1E-18 T 29-03-2018 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF07650 KH domain 38 111 4.2E-22 T 29-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.1140.32 108 207 9.7E-42 T 29-03-2018 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 Gene3D G3DSA:3.30.300.20 17 107 3.8E-29 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 SMART SM00322 60 125 3.0E-9 T 29-03-2018 IPR004087 K Homology domain GO:0003676 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.2E-42 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 29-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 40.232 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54814 2 106 7.85E-39 T 29-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 SUPERFAMILY SSF54821 108 206 9.94E-43 T 29-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11140 397f374ffa27cc6b634f1a88a3a5d2aa 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-99 T 29-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM474_RS26160 10e510fd2ecaa4ce00b37e638af9fa11 139 SUPERFAMILY SSF54427 2 131 1.35E-22 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS26160 10e510fd2ecaa4ce00b37e638af9fa11 139 Pfam PF13474 SnoaL-like domain 9 131 2.4E-16 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS26160 10e510fd2ecaa4ce00b37e638af9fa11 139 Gene3D G3DSA:3.10.450.50 1 135 3.5E-20 T 29-03-2018 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 Gene3D G3DSA:3.30.9.10 202 341 3.0E-32 T 29-03-2018 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 Gene3D G3DSA:3.30.9.10 100 201 1.2E-11 T 29-03-2018 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 Pfam PF01266 FAD dependent oxidoreductase 23 345 5.7E-49 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 417 505 1.7E-13 T 29-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 Gene3D G3DSA:3.50.50.60 5 89 0.0085 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 334 340 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 365 377 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 2.0E-22 T 29-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 AM474_RS04340 6d649cb89033e1c65bc4fec07536d5c3 526 SUPERFAMILY SSF51905 22 345 3.89E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 Pfam PF12849 PBP superfamily domain 104 313 4.0E-26 T 29-03-2018 IPR024370 PBP domain AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 SUPERFAMILY SSF103088 340 463 3.27E-20 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 Gene3D G3DSA:3.30.1330.60 332 464 3.8E-19 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 Gene3D G3DSA:3.40.190.10 48 172 3.6E-15 T 29-03-2018 AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 Gene3D G3DSA:3.40.190.10 173 291 9.5E-29 T 29-03-2018 AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 SUPERFAMILY SSF53850 51 71 4.94E-60 T 29-03-2018 AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 SUPERFAMILY SSF53850 102 374 4.94E-60 T 29-03-2018 AM474_RS00030 09c115edd73b613b7a7d6ccd85aa53c8 464 Pfam PF00691 OmpA family 363 457 5.1E-9 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS00580 6f8411e36c13ae8687028eef1dc8360f 69 SUPERFAMILY SSF54862 2 57 4.1E-7 T 29-03-2018 AM474_RS00580 6f8411e36c13ae8687028eef1dc8360f 69 Pfam PF13459 4Fe-4S single cluster domain 4 60 7.1E-11 T 29-03-2018 AM474_RS12770 c4207e35884fa1525f9cc0b9c247289a 139 Pfam PF14467 Domain of unknown function (DUF4426) 23 138 1.1E-40 T 29-03-2018 IPR025218 Domain of unknown function DUF4426 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 295 364 1.63E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 119 263 1.63E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52980 21 151 9.12E-13 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.1350.10 7 154 1.2E-23 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1022 1028 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF02384 N-6 DNA Methylase 860 1042 1.8E-5 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.150 880 1277 1.7E-29 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 522 600 5.57E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 453 480 5.57E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 398 418 5.57E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF52540 317 364 5.57E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SUPERFAMILY SSF53335 795 1181 3.5E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SMART SM00490 511 595 2.5E-5 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF13156 Restriction endonuclease 35 157 6.6E-49 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 917 931 1.5E-6 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1019 1031 1.5E-6 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 882 898 1.5E-6 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF04851 Type III restriction enzyme, res subunit 165 365 6.5E-34 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.300 431 605 0.0024 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Gene3D G3DSA:3.40.50.300 165 391 4.8E-26 T 29-03-2018 AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 Pfam PF00271 Helicase conserved C-terminal domain 520 594 1.4E-5 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS14855 7d76d045e7ff74de1cfe7f22c30a18e8 1626 SMART SM00487 163 396 4.8E-19 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 4.0E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SMART SM00388 249 315 1.8E-9 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 468 4.8E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SMART SM00387 358 470 1.0E-35 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SMART SM00304 195 248 1.5E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 Gene3D G3DSA:1.10.287.130 239 310 2.0E-9 T 29-03-2018 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 Gene3D G3DSA:3.30.565.10 319 472 1.2E-37 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 Pfam PF00672 HAMP domain 195 244 3.7E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SUPERFAMILY SSF47384 232 314 9.42E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SUPERFAMILY SSF55874 305 468 3.93E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 9.5E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 9.5E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 9.5E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 SUPERFAMILY SSF158472 198 245 4.84E-7 T 29-03-2018 AM474_RS32280 d86f31a575d052e069d90520ea38d09b 472 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 5 467 2.4E-179 T 29-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 AM474_RS12450 fde22eb1fa65934804c96e55429cd085 166 Gene3D G3DSA:3.10.129.10 31 153 1.1E-20 T 29-03-2018 AM474_RS12450 fde22eb1fa65934804c96e55429cd085 166 Pfam PF03061 Thioesterase superfamily 49 122 6.4E-13 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS12450 fde22eb1fa65934804c96e55429cd085 166 SUPERFAMILY SSF54637 36 155 1.73E-23 T 29-03-2018 IPR029069 HotDog domain AM474_RS00975 a9ffdc98ca470e2c315f42d12471ac5b 206 Gene3D G3DSA:1.10.3890.10 3 205 7.7E-78 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM474_RS00975 a9ffdc98ca470e2c315f42d12471ac5b 206 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 196 2.0E-93 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM474_RS00975 a9ffdc98ca470e2c315f42d12471ac5b 206 Pfam PF04356 Protein of unknown function (DUF489) 7 197 1.4E-70 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM474_RS00975 a9ffdc98ca470e2c315f42d12471ac5b 206 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 33.94 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM474_RS00975 a9ffdc98ca470e2c315f42d12471ac5b 206 SUPERFAMILY SSF101322 4 205 2.09E-73 T 29-03-2018 IPR007451 Uncharacterised protein family UPF0274 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 5.3E-101 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.5E-103 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 41.481 T 29-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 68 5.1E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 Gene3D G3DSA:3.40.50.620 1 176 4.9E-77 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 SUPERFAMILY SSF52374 1 281 8.45E-107 T 29-03-2018 AM474_RS19600 ea0ee37cc342b6f6a1e467b09cae366c 283 Gene3D G3DSA:3.30.1300.10 177 283 8.6E-31 T 29-03-2018 AM474_RS27660 6525b9bf6d2437fcafba54e483b35011 289 SUPERFAMILY SSF101898 41 283 3.92E-18 T 29-03-2018 AM474_RS27660 6525b9bf6d2437fcafba54e483b35011 289 Gene3D G3DSA:2.120.10.30 36 110 2.7E-4 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS27660 6525b9bf6d2437fcafba54e483b35011 289 Pfam PF03088 Strictosidine synthase 144 189 1.2E-4 T 29-03-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 AM474_RS27660 6525b9bf6d2437fcafba54e483b35011 289 Gene3D G3DSA:2.120.10.30 111 256 2.5E-10 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS02820 5f6ae5c523287cd452f0d124f689705b 211 Gene3D G3DSA:1.20.1510.10 23 204 4.2E-16 T 29-03-2018 AM474_RS02820 5f6ae5c523287cd452f0d124f689705b 211 Pfam PF01545 Cation efflux family 28 202 2.5E-12 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS02820 5f6ae5c523287cd452f0d124f689705b 211 SUPERFAMILY SSF161111 23 202 6.54E-30 T 29-03-2018 AM474_RS31645 99a30abec7b979911d99d74ea85b93d2 254 SUPERFAMILY SSF53474 2 232 6.39E-45 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31645 99a30abec7b979911d99d74ea85b93d2 254 Gene3D G3DSA:3.40.50.1820 2 236 2.0E-24 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31645 99a30abec7b979911d99d74ea85b93d2 254 Pfam PF00975 Thioesterase domain 7 230 2.0E-39 T 29-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 AM474_RS20805 d98fdd0b05985732a8797ea764968308 226 Gene3D G3DSA:2.60.120.620 3 187 8.6E-36 T 29-03-2018 AM474_RS20805 d98fdd0b05985732a8797ea764968308 226 SUPERFAMILY SSF51197 3 174 1.24E-6 T 29-03-2018 AM474_RS20805 d98fdd0b05985732a8797ea764968308 226 SMART SM00702 1 177 9.6E-35 T 29-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AM474_RS20805 d98fdd0b05985732a8797ea764968308 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 1.1E-12 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM474_RS20805 d98fdd0b05985732a8797ea764968308 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.219 T 29-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 AM474_RS29975 e5a382274c674667649dd0ef3419e10d 453 Pfam PF00419 Fimbrial protein 268 453 9.2E-28 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS29975 e5a382274c674667649dd0ef3419e10d 453 PIRSF PIRSF029766 7 453 2.3E-197 T 29-03-2018 IPR011228 Uncharacterised conserved protein UCP029766 AM474_RS29975 e5a382274c674667649dd0ef3419e10d 453 SUPERFAMILY SSF49401 274 451 9.11E-9 T 29-03-2018 IPR008966 Adhesion domain AM474_RS29975 e5a382274c674667649dd0ef3419e10d 453 Gene3D G3DSA:2.60.40.1090 274 453 1.1E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS19005 ea33e110326fcffdf3e860e4d97b121f 356 PIRSF PIRSF029693 1 356 5.3E-219 T 29-03-2018 IPR016936 Uncharacterised conserved protein UCP029693 AM474_RS19005 ea33e110326fcffdf3e860e4d97b121f 356 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 34 356 1.2E-162 T 29-03-2018 IPR016936 Uncharacterised conserved protein UCP029693 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 2.6E-21 T 29-03-2018 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 2.6E-21 T 29-03-2018 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 143 158 2.6E-21 T 29-03-2018 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 2.6E-21 T 29-03-2018 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 SUPERFAMILY SSF51905 2 164 1.5E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 SUPERFAMILY SSF51905 260 362 1.5E-51 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 Gene3D G3DSA:3.50.50.60 1 337 3.6E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00770 ca04e70806122da4bc79bb714bcdf284 382 Pfam PF01494 FAD binding domain 2 306 8.6E-21 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 2.4E-69 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF69065 4 158 9.07E-50 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF00035 Double-stranded RNA binding motif 155 219 8.4E-8 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 Pfam PF14622 Ribonuclease-III-like 18 139 6.9E-35 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 SUPERFAMILY SSF54768 108 226 5.79E-26 T 29-03-2018 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00535 20 148 1.8E-59 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.116 T 29-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 SMART SM00358 155 223 7.1E-16 T 29-03-2018 IPR014720 Double-stranded RNA-binding domain AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:3.30.160.20 150 226 2.6E-16 T 29-03-2018 AM474_RS22495 8a85b935615972fe6aafaebefd54bc09 229 Gene3D G3DSA:1.10.1520.10 1 149 8.8E-45 T 29-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 AM474_RS17465 b15cdaa089873c05ab01301cb1fabc6a 158 SUPERFAMILY SSF55811 5 133 8.53E-20 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS17465 b15cdaa089873c05ab01301cb1fabc6a 158 Pfam PF00293 NUDIX domain 9 127 2.3E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS17465 b15cdaa089873c05ab01301cb1fabc6a 158 Gene3D G3DSA:3.90.79.10 1 145 3.0E-19 T 29-03-2018 AM474_RS11340 6565911d4e8a5b0cdf4e8401575290dd 140 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 140 1.2E-49 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 AM474_RS11340 6565911d4e8a5b0cdf4e8401575290dd 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 1 140 1.2E-56 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 AM474_RS11340 6565911d4e8a5b0cdf4e8401575290dd 140 PIRSF PIRSF004638 1 140 5.1E-62 T 29-03-2018 IPR005265 Uncharacterised protein family UPF0093 AM474_RS31690 985f6770f2d1a8b6c364fa7b0298d979 472 Pfam PF03573 outer membrane porin, OprD family 52 470 7.6E-136 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS31690 985f6770f2d1a8b6c364fa7b0298d979 472 Gene3D G3DSA:2.40.160.10 57 471 9.8E-98 T 29-03-2018 AM474_RS27760 b2929b46107efa60c40a70963188264e 390 Gene3D G3DSA:1.20.5.50 257 388 3.5E-4 T 29-03-2018 AM474_RS27760 b2929b46107efa60c40a70963188264e 390 Pfam PF04888 Secretion system effector C (SseC) like family 111 385 7.1E-54 T 29-03-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 AM474_RS01020 e861004927ac5e46a04a26d14dce5288 672 SUPERFAMILY SSF63829 474 520 3.17E-13 T 29-03-2018 AM474_RS01020 e861004927ac5e46a04a26d14dce5288 672 SUPERFAMILY SSF63829 345 435 3.17E-13 T 29-03-2018 AM474_RS01020 e861004927ac5e46a04a26d14dce5288 672 SUPERFAMILY SSF63829 557 636 3.17E-13 T 29-03-2018 AM474_RS01020 e861004927ac5e46a04a26d14dce5288 672 Gene3D G3DSA:2.120.10.30 237 649 1.4E-10 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS01020 e861004927ac5e46a04a26d14dce5288 672 Pfam PF05787 Bacterial protein of unknown function (DUF839) 85 636 8.1E-196 T 29-03-2018 IPR008557 Protein of unknown function DUF839 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 7 22 6.6E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 42 60 6.6E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 PRINTS PR00050 Cold shock protein signature 27 36 6.6E-17 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.7E-28 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 SMART SM00357 6 69 3.9E-29 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 PIRSF PIRSF002599 1 69 1.8E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 SUPERFAMILY SSF50249 3 68 9.64E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05630 44f5cfcef2070990b8e97f0509699a72 69 Gene3D G3DSA:2.40.50.140 1 69 6.6E-27 T 29-03-2018 AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 1.1E-55 T 29-03-2018 AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 5.1E-5 T 29-03-2018 AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 2.0E-34 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.7E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 Gene3D G3DSA:3.40.50.10090 1 49 3.7E-8 T 29-03-2018 AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 SUPERFAMILY SSF51735 4 250 1.9E-72 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS21450 e5396bf928a513de5af6b83f02d5250c 252 Gene3D G3DSA:3.40.50.720 50 252 2.3E-59 T 29-03-2018 AM474_RS00490 9b174ecb589acc70dfbac02453511bbe 535 Gene3D G3DSA:3.50.50.60 5 535 3.4E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00490 9b174ecb589acc70dfbac02453511bbe 535 SUPERFAMILY SSF51905 486 530 5.6E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00490 9b174ecb589acc70dfbac02453511bbe 535 SUPERFAMILY SSF51905 8 343 5.6E-41 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00490 9b174ecb589acc70dfbac02453511bbe 535 Pfam PF01593 Flavin containing amine oxidoreductase 24 304 3.2E-14 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AM474_RS03515 adef8707eda647313e1970f2942af531 267 PIRSF PIRSF005902 1 266 6.9E-64 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS03515 adef8707eda647313e1970f2942af531 267 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 128 138 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM474_RS03515 adef8707eda647313e1970f2942af531 267 Gene3D G3DSA:3.20.20.140 1 267 6.2E-80 T 29-03-2018 AM474_RS03515 adef8707eda647313e1970f2942af531 267 Pfam PF01026 TatD related DNase 4 261 3.4E-61 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS03515 adef8707eda647313e1970f2942af531 267 SUPERFAMILY SSF51556 3 263 7.9E-77 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS22350 5713ee6d54aea601648de60536af24de 214 Gene3D G3DSA:1.10.287.70 107 209 3.7E-15 T 29-03-2018 AM474_RS22350 5713ee6d54aea601648de60536af24de 214 Pfam PF07885 Ion channel 126 207 3.0E-12 T 29-03-2018 IPR013099 Potassium channel domain AM474_RS22350 5713ee6d54aea601648de60536af24de 214 SUPERFAMILY SSF81324 117 209 2.35E-16 T 29-03-2018 AM474_RS09475 2278c9a0e27365f87d3bb55b556e554e 192 Gene3D G3DSA:3.40.630.30 2 192 1.2E-26 T 29-03-2018 AM474_RS09475 2278c9a0e27365f87d3bb55b556e554e 192 SUPERFAMILY SSF55729 11 159 2.61E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS09475 2278c9a0e27365f87d3bb55b556e554e 192 Pfam PF13302 Acetyltransferase (GNAT) domain 17 158 1.8E-33 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS09965 0e2d91198d8b979fb56724d27aa5180e 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 200 9.3E-62 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM474_RS09965 0e2d91198d8b979fb56724d27aa5180e 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 36.238 T 29-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 AM474_RS09965 0e2d91198d8b979fb56724d27aa5180e 209 Pfam PF02441 Flavoprotein 6 181 1.1E-24 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS09965 0e2d91198d8b979fb56724d27aa5180e 209 SUPERFAMILY SSF52507 6 202 1.7E-59 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS09965 0e2d91198d8b979fb56724d27aa5180e 209 Gene3D G3DSA:3.40.50.1950 5 209 3.5E-52 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 SUPERFAMILY SSF51556 93 396 1.0E-100 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS14115 377331cea899147e9241db8c367f6f21 456 Gene3D G3DSA:2.30.40.10 30 101 1.2E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 Gene3D G3DSA:3.20.20.140 102 382 1.0E-70 T 29-03-2018 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 50 449 1.3E-181 T 29-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 SUPERFAMILY SSF51338 47 109 1.36E-6 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 Pfam PF01979 Amidohydrolase family 91 450 3.2E-64 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS14115 377331cea899147e9241db8c367f6f21 456 Gene3D G3DSA:2.30.40.10 383 456 0.17 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS13655 d35aff16f2c5c501e61c837a28b758e6 283 Pfam PF01144 Coenzyme A transferase 6 216 1.9E-24 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS13655 d35aff16f2c5c501e61c837a28b758e6 283 SMART SM00882 4 224 9.1E-47 T 29-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 AM474_RS13655 d35aff16f2c5c501e61c837a28b758e6 283 SUPERFAMILY SSF100950 4 277 8.37E-79 T 29-03-2018 AM474_RS13655 d35aff16f2c5c501e61c837a28b758e6 283 Gene3D G3DSA:3.40.1080.10 2 283 1.8E-53 T 29-03-2018 AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 190 0.0013 T 29-03-2018 AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.8E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.8E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.8E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.7E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 249 2.8E-61 T 29-03-2018 AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 Gene3D G3DSA:3.40.50.720 3 45 2.8E-9 T 29-03-2018 AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 Gene3D G3DSA:3.40.50.720 46 250 7.9E-61 T 29-03-2018 AM474_RS13860 5eda4bd461953f9d97fbf2a5256948f7 250 SUPERFAMILY SSF51735 10 249 3.48E-76 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 321 347 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 124 142 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 289 316 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 84 102 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 21 44 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PRINTS PR00067 Catalase signature 105 122 2.4E-71 T 29-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 29-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 Gene3D G3DSA:2.40.180.10 1 358 3.3E-159 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF00199 Catalase 8 390 5.7E-187 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 29-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 SMART SM01060 8 393 2.5E-283 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 PIRSF PIRSF038928 1 482 1.6E-221 T 29-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 SUPERFAMILY SSF56634 3 481 3.79E-211 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS11035 07dd5d23b964a2d7151e58d18875ad23 482 Pfam PF06628 Catalase-related immune-responsive 418 477 1.1E-20 T 29-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS09915 5899a94d2e8dc76d31f7d3993a27c2e5 285 Gene3D G3DSA:3.40.50.150 2 262 1.8E-24 T 29-03-2018 AM474_RS09915 5899a94d2e8dc76d31f7d3993a27c2e5 285 Pfam PF04072 Leucine carboxyl methyltransferase 60 180 1.0E-15 T 29-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AM474_RS09915 5899a94d2e8dc76d31f7d3993a27c2e5 285 SUPERFAMILY SSF53335 27 260 1.97E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 SUPERFAMILY SSF143034 2 61 6.67E-20 T 29-03-2018 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.841 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 4.6E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.6E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 4.6E-20 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 1.0E-23 T 29-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 Pfam PF01632 Ribosomal protein L35 2 60 4.0E-23 T 29-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS01630 9b683c4717ddf2f13ced5e382f6c7249 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 29-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS20090 540af7e72bd4000030403f6cd4d555f4 157 SUPERFAMILY SSF51182 21 125 1.18E-11 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS20090 540af7e72bd4000030403f6cd4d555f4 157 Gene3D G3DSA:2.60.120.10 16 145 1.7E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS20090 540af7e72bd4000030403f6cd4d555f4 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 138 3.5E-44 T 29-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family AM474_RS18725 27f2ff9c766ff78cc1b0ff1b2cdd74ec 340 Pfam PF04773 FecR protein 131 226 9.3E-21 T 29-03-2018 IPR006860 FecR protein AM474_RS18725 27f2ff9c766ff78cc1b0ff1b2cdd74ec 340 Pfam PF16220 Domain of unknown function (DUF4880) 33 74 3.9E-12 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS18725 27f2ff9c766ff78cc1b0ff1b2cdd74ec 340 PIRSF PIRSF018266 21 340 1.5E-96 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 SMART SM00422 2 71 1.6E-27 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 58 132 1.7E-18 T 29-03-2018 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 Gene3D G3DSA:1.10.1660.10 1 57 5.6E-20 T 29-03-2018 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 SUPERFAMILY SSF46955 2 128 2.23E-32 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 2 128 1.3E-51 T 29-03-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF00376 MerR family regulatory protein 3 40 1.3E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.4E-7 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS02830 201f56cb0332c48dd4d809a079547a8b 132 Pfam PF09278 MerR, DNA binding 45 109 1.6E-18 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS21605 d0fe92fae0475328e66940b0f320d2ff 278 Gene3D G3DSA:1.20.5.50 72 160 0.0035 T 29-03-2018 AM474_RS21605 d0fe92fae0475328e66940b0f320d2ff 278 Gene3D G3DSA:1.20.120.330 161 278 1.8E-6 T 29-03-2018 AM474_RS01915 b2ca076ef031c852c544236e1084612b 368 SMART SM00476 8 272 2.4E-5 T 29-03-2018 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 AM474_RS01915 b2ca076ef031c852c544236e1084612b 368 Gene3D G3DSA:3.40.10.10 297 368 2.0E-17 T 29-03-2018 IPR035451 Ada-like domain AM474_RS01915 b2ca076ef031c852c544236e1084612b 368 Gene3D G3DSA:3.60.10.10 25 272 2.6E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS01915 b2ca076ef031c852c544236e1084612b 368 SUPERFAMILY SSF57884 321 368 5.23E-10 T 29-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AM474_RS01915 b2ca076ef031c852c544236e1084612b 368 SUPERFAMILY SSF56219 25 271 4.19E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 PIRSF PIRSF039102 3 343 2.2E-98 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Gene3D G3DSA:3.30.470.20 201 344 3.4E-40 T 29-03-2018 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 331 6.8E-88 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 SUPERFAMILY SSF52440 5 132 2.49E-26 T 29-03-2018 IPR016185 Pre-ATP-grasp domain AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 SUPERFAMILY SSF56059 133 334 2.65E-54 T 29-03-2018 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Pfam PF01820 D-ala D-ala ligase N-terminus 7 123 7.8E-22 T 29-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 277 305 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Gene3D G3DSA:3.30.1490.20 135 200 2.0E-18 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 335 35.47 T 29-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 100 111 - T 29-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Gene3D G3DSA:3.40.50.20 1 134 8.2E-36 T 29-03-2018 AM474_RS10855 0bbd2e9b052e9c6b14d19e9afe92689b 346 Pfam PF07478 D-ala D-ala ligase C-terminus 146 330 3.2E-51 T 29-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 3.4E-17 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 Gene3D G3DSA:1.10.10.10 144 227 3.3E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 SUPERFAMILY SSF51206 11 141 6.42E-31 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 SMART SM00100 16 134 2.3E-13 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 SUPERFAMILY SSF46785 152 225 1.82E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 Gene3D G3DSA:2.60.120.10 1 143 4.2E-26 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 Pfam PF00027 Cyclic nucleotide-binding domain 35 121 7.2E-20 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS13375 8978c0249a36cf43c58494ee52ee73b7 228 SMART SM00419 170 218 3.0E-8 T 29-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AM474_RS22535 593ac63caf3136dfce44e3e2f6c2f67b 134 SUPERFAMILY SSF141066 32 133 1.31E-27 T 29-03-2018 IPR018990 Proteinase inhibitor I42, chagasin AM474_RS22535 593ac63caf3136dfce44e3e2f6c2f67b 134 Pfam PF09394 Chagasin family peptidase inhibitor I42 41 130 6.2E-22 T 29-03-2018 IPR018990 Proteinase inhibitor I42, chagasin AM474_RS09625 fc2ee8b23f5a0f5723b00ecc4b231524 105 Gene3D G3DSA:1.10.10.10 1 68 3.9E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09625 fc2ee8b23f5a0f5723b00ecc4b231524 105 Pfam PF01527 Transposase 1 52 1.2E-12 T 29-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AM474_RS09625 fc2ee8b23f5a0f5723b00ecc4b231524 105 SUPERFAMILY SSF48295 1 56 1.52E-11 T 29-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM474_RS09520 7881963436e2be68f7dbad92418ed485 238 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 235 1.1E-66 T 29-03-2018 IPR018648 Protein of unknown function DUF2076 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 Pfam PF03466 LysR substrate binding domain 88 281 2.1E-30 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 Gene3D G3DSA:3.40.190.10 90 167 1.1E-13 T 29-03-2018 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.5E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 Gene3D G3DSA:1.10.10.10 1 84 2.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 Gene3D G3DSA:3.40.190.10 168 256 9.0E-12 T 29-03-2018 AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 SUPERFAMILY SSF46785 1 110 3.32E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32135 8db528d5bc6e1b657925c4ae1fab84f1 292 SUPERFAMILY SSF53850 90 283 1.38E-28 T 29-03-2018 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 Gene3D G3DSA:1.10.10.60 47 82 1.3E-12 T 29-03-2018 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 Gene3D G3DSA:1.10.10.60 6 46 2.6E-14 T 29-03-2018 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 187 1.4E-10 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.0E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 SUPERFAMILY SSF48498 81 192 6.82E-26 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 Gene3D G3DSA:1.10.357.10 83 193 9.1E-23 T 29-03-2018 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 SUPERFAMILY SSF46689 2 73 1.44E-17 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30305 52d217b400b8f1e5ea163f88c0138afb 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.3E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS27890 13dadabc237d556a4f4bc110156c5c3b 243 Pfam PF00227 Proteasome subunit 4 182 5.7E-9 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS27890 13dadabc237d556a4f4bc110156c5c3b 243 Gene3D G3DSA:3.60.20.10 2 224 5.3E-40 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS27890 13dadabc237d556a4f4bc110156c5c3b 243 SUPERFAMILY SSF56235 2 237 1.42E-36 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS27890 13dadabc237d556a4f4bc110156c5c3b 243 PIRSF PIRSF009120 1 242 3.9E-106 T 29-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AM474_RS27395 64fe5e2432b2558ff3c37168beb3a65e 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 110 1.5E-7 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM474_RS27395 64fe5e2432b2558ff3c37168beb3a65e 115 SUPERFAMILY SSF51316 1 113 5.65E-29 T 29-03-2018 IPR011057 Mss4-like AM474_RS27395 64fe5e2432b2558ff3c37168beb3a65e 115 Gene3D G3DSA:3.90.1590.10 1 111 2.2E-23 T 29-03-2018 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 SUPERFAMILY SSF51430 7 262 3.27E-79 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PIRSF PIRSF000097 2 270 1.3E-60 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 Pfam PF00248 Aldo/keto reductase family 12 255 8.3E-46 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 Gene3D G3DSA:3.20.20.100 2 268 2.7E-81 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PRINTS PR00069 Aldo-keto reductase signature 30 54 3.9E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PRINTS PR00069 Aldo-keto reductase signature 154 183 3.9E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PRINTS PR00069 Aldo-keto reductase signature 86 104 3.9E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PRINTS PR00069 Aldo-keto reductase signature 191 215 3.9E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 PRINTS PR00069 Aldo-keto reductase signature 119 136 3.9E-42 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM474_RS10705 6fddb497517306cb5a0bffbac23880ed 272 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 34 51 - T 29-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 7.6E-26 T 29-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Gene3D G3DSA:1.10.40.30 381 438 4.3E-27 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Gene3D G3DSA:1.10.275.10 8 112 3.0E-40 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Gene3D G3DSA:1.20.200.10 113 380 1.4E-97 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 44.01 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 Pfam PF00206 Lyase 12 306 1.5E-77 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 SUPERFAMILY SSF48557 10 461 3.93E-156 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 458 4.2E-193 T 29-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 5.1E-31 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 5.1E-31 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 5.1E-31 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 5.1E-31 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 1.3E-69 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.3E-69 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 1.3E-69 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.3E-69 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.3E-69 T 29-03-2018 AM474_RS16505 17676e48e6e415c1a54420da0b4f3344 464 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 1.3E-69 T 29-03-2018 AM474_RS04505 c382d7357c18246152efd1b0a13320a4 158 Gene3D G3DSA:1.10.260.40 2 74 5.9E-10 T 29-03-2018 AM474_RS04505 c382d7357c18246152efd1b0a13320a4 158 SUPERFAMILY SSF47413 9 61 4.02E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS04505 c382d7357c18246152efd1b0a13320a4 158 Pfam PF13560 Helix-turn-helix domain 11 58 9.4E-8 T 29-03-2018 AM474_RS04505 c382d7357c18246152efd1b0a13320a4 158 SMART SM00530 13 68 0.0036 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS03045 4e877976048f65a651fa4061495791c9 126 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 17 110 4.7E-35 T 29-03-2018 IPR019110 Uncharacterised protein family, RAQPRD AM474_RS03045 4e877976048f65a651fa4061495791c9 126 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 36 109 1.1E-27 T 29-03-2018 IPR019110 Uncharacterised protein family, RAQPRD AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 27 104 5.7E-29 T 29-03-2018 IPR003849 Preprotein translocase YajC AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 Pfam PF02699 Preprotein translocase subunit 28 101 1.3E-28 T 29-03-2018 IPR003849 Preprotein translocase YajC AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 44 4.7E-12 T 29-03-2018 IPR003849 Preprotein translocase YajC AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 62 80 4.7E-12 T 29-03-2018 IPR003849 Preprotein translocase YajC AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 Gene3D G3DSA:2.40.33.10 49 100 4.7E-4 T 29-03-2018 AM474_RS08810 701db74427bdb380b87fade9f68c21f3 112 SMART SM01323 22 104 5.8E-42 T 29-03-2018 IPR003849 Preprotein translocase YajC AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 Pfam PF13183 4Fe-4S dicluster domain 242 336 7.6E-12 T 29-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 323 334 - T 29-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 2.1E-89 T 29-03-2018 IPR021872 Protein of unknown function DUF3483 AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 Gene3D G3DSA:1.10.1060.10 213 360 6.4E-26 T 29-03-2018 AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 SUPERFAMILY SSF46548 222 352 2.27E-19 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 Pfam PF02754 Cysteine-rich domain 525 611 9.9E-14 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS15780 f5fa413e0c14daaea486d5800f08f142 653 Pfam PF02754 Cysteine-rich domain 402 481 0.0079 T 29-03-2018 IPR004017 Cysteine-rich domain AM474_RS17775 4f62355b225c2a4e6a6f6ddd0fb2f7c1 309 Gene3D G3DSA:3.90.1690.10 1 309 1.5E-56 T 29-03-2018 AM474_RS06885 f4473ff9d68986ffc18baa5bb64b1cce 238 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 212 26.836 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM474_RS06885 f4473ff9d68986ffc18baa5bb64b1cce 238 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 2.0E-62 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS06885 f4473ff9d68986ffc18baa5bb64b1cce 238 PIRSF PIRSF006102 2 220 3.8E-74 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS06885 f4473ff9d68986ffc18baa5bb64b1cce 238 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 210 5.4E-88 T 29-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AM474_RS08505 8d6293e7b9bba840153f30615bc240ff 150 Gene3D G3DSA:3.40.960.10 34 144 5.8E-30 T 29-03-2018 AM474_RS08505 8d6293e7b9bba840153f30615bc240ff 150 Pfam PF03852 DNA mismatch endonuclease Vsr 20 85 8.8E-27 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM474_RS08505 8d6293e7b9bba840153f30615bc240ff 150 PIRSF PIRSF018267 16 150 8.7E-48 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM474_RS08505 8d6293e7b9bba840153f30615bc240ff 150 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 20 132 1.2E-39 T 29-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AM474_RS08505 8d6293e7b9bba840153f30615bc240ff 150 SUPERFAMILY SSF52980 22 142 1.02E-45 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 Pfam PF01037 Lrp/AsnC ligand binding domain 68 134 7.7E-16 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 SMART SM00344 2 108 2.5E-28 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.8E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.8E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.8E-12 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 SUPERFAMILY SSF54909 64 137 4.29E-15 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 SUPERFAMILY SSF46785 2 62 8.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 Gene3D G3DSA:3.30.70.920 52 140 3.2E-18 T 29-03-2018 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 8.9E-14 T 29-03-2018 AM474_RS00195 045db9c6cbe13f188a466f291ba103ae 145 Gene3D G3DSA:1.10.10.10 2 51 9.1E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 SUPERFAMILY SSF46894 146 211 1.7E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 SMART SM00421 153 210 1.9E-18 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 Gene3D G3DSA:3.40.50.2300 1 126 2.9E-27 T 29-03-2018 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 Gene3D G3DSA:1.10.10.10 127 215 1.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 Pfam PF00072 Response regulator receiver domain 4 117 4.4E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 SMART SM00448 2 116 2.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 2.0E-20 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 4.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 4.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 4.1E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS29205 ef238751d5931b4d66f1021cf5779b51 221 SUPERFAMILY SSF52172 1 131 4.7E-28 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS24680 f19efa4ca894874c56c74d91740dab24 122 Pfam PF09961 Uncharacterized protein conserved in bacteria (DUF2195) 6 120 1.4E-32 T 29-03-2018 IPR018696 Protein of unknown function DUF2195 AM474_RS11645 0ce5e9223f2d234cab43ab2e1a53de5b 338 Gene3D G3DSA:3.30.200.20 3 103 5.5E-32 T 29-03-2018 AM474_RS11645 0ce5e9223f2d234cab43ab2e1a53de5b 338 Gene3D G3DSA:3.90.1200.10 104 337 4.5E-39 T 29-03-2018 AM474_RS11645 0ce5e9223f2d234cab43ab2e1a53de5b 338 SUPERFAMILY SSF56112 30 318 9.48E-55 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS11645 0ce5e9223f2d234cab43ab2e1a53de5b 338 Pfam PF01636 Phosphotransferase enzyme family 37 259 2.4E-35 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS06095 65702ca0236538cbcd8e504e8d1e2da9 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 49 102 1.4E-20 T 29-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal AM474_RS06095 65702ca0236538cbcd8e504e8d1e2da9 107 Gene3D G3DSA:1.10.287.1160 74 102 5.1E-14 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM474_RS06095 65702ca0236538cbcd8e504e8d1e2da9 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 5 104 1.4E-26 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM474_RS06095 65702ca0236538cbcd8e504e8d1e2da9 107 SUPERFAMILY SSF101498 5 104 1.02E-19 T 29-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 Pfam PF09339 IclR helix-turn-helix domain 8 55 2.3E-10 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 SMART SM00346 8 94 3.3E-7 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 Gene3D G3DSA:1.10.10.10 1 75 4.5E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 Gene3D G3DSA:3.30.450.40 76 242 1.3E-36 T 29-03-2018 IPR029016 GAF domain-like AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 SUPERFAMILY SSF55781 62 241 2.42E-38 T 29-03-2018 IPR029016 GAF domain-like AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 Pfam PF01614 Bacterial transcriptional regulator 128 238 7.5E-16 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS05100 e03a5ea0d6e4a4c0886ab7620044937e 242 SUPERFAMILY SSF46785 7 74 3.3E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 426.603 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:1.10.1860.10 1 88 3.7E-38 T 29-03-2018 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:1.20.1220.12 589 724 9.5E-45 T 29-03-2018 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 SUPERFAMILY SSF51645 2 723 0.0 T 29-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Pfam PF01274 Malate synthase 18 697 2.2E-178 T 29-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:3.20.20.360 220 588 1.6E-105 T 29-03-2018 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 Gene3D G3DSA:3.20.20.360 89 219 8.7E-25 T 29-03-2018 AM474_RS12275 acedfc3735cae22e79080e9db6c3423b 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 723 0.0 T 29-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AM474_RS23900 2f68d720d1e7d9fcb3ff5638bfa6d322 252 Gene3D G3DSA:3.60.15.10 7 232 1.9E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23900 2f68d720d1e7d9fcb3ff5638bfa6d322 252 SMART SM00849 11 162 4.2E-15 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23900 2f68d720d1e7d9fcb3ff5638bfa6d322 252 Pfam PF12706 Beta-lactamase superfamily domain 22 204 3.9E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS23900 2f68d720d1e7d9fcb3ff5638bfa6d322 252 SUPERFAMILY SSF56281 1 222 1.04E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 1.1E-53 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 1.1E-53 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 1.1E-53 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 1.1E-53 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.1E-53 T 29-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 Gene3D G3DSA:3.40.220.10 1 160 1.1E-34 T 29-03-2018 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 41.331 T 29-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 4.6E-31 T 29-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 SUPERFAMILY SSF52949 1 182 1.24E-43 T 29-03-2018 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 Gene3D G3DSA:3.40.630.10 168 495 5.4E-140 T 29-03-2018 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 SUPERFAMILY SSF53187 177 493 1.35E-126 T 29-03-2018 AM474_RS08860 29378e49302ce9ed42004673bb22de8c 495 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 486 1.3E-127 T 29-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 SUPERFAMILY SSF53613 4 295 1.71E-63 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 Gene3D G3DSA:2.20.150.10 11 44 5.7E-13 T 29-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 307 1.6E-104 T 29-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 307 1.2E-103 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 Gene3D G3DSA:3.40.1190.20 45 310 3.1E-42 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 Pfam PF00294 pfkB family carbohydrate kinase 17 289 5.5E-42 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM474_RS07135 5f536f5b6b84c001ba2fb41d129820b9 314 PIRSF PIRSF000535 1 310 8.8E-83 T 29-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AM474_RS15255 9d2128108488ac8ceb98d078a897eb19 307 SUPERFAMILY SSF53807 25 304 5.89E-69 T 29-03-2018 AM474_RS15255 9d2128108488ac8ceb98d078a897eb19 307 Gene3D G3DSA:3.40.50.1980 25 187 2.3E-42 T 29-03-2018 AM474_RS15255 9d2128108488ac8ceb98d078a897eb19 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 297 1.1E-51 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM474_RS15255 9d2128108488ac8ceb98d078a897eb19 307 Gene3D G3DSA:3.40.50.1980 188 305 2.2E-20 T 29-03-2018 AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 Pfam PF13462 Thioredoxin 453 608 5.5E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 Pfam PF06965 Na+/H+ antiporter 1 21 425 4.5E-119 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 Gene3D G3DSA:3.40.30.10 448 613 2.4E-33 T 29-03-2018 AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 18 432 18.967 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 Gene3D G3DSA:1.20.1530.10 16 432 3.3E-120 T 29-03-2018 IPR023171 Na/H antiporter domain AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 SUPERFAMILY SSF52833 447 608 6.09E-34 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS03150 a533cedfb60ce3fd2f10fac3b6941034 621 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 22 424 1.5E-86 T 29-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AM474_RS00610 31447145ae6037dcbe9ff2cfc75d999a 458 Gene3D G3DSA:3.30.200.20 10 106 4.5E-6 T 29-03-2018 AM474_RS00610 31447145ae6037dcbe9ff2cfc75d999a 458 Gene3D G3DSA:3.90.1200.10 107 279 2.1E-12 T 29-03-2018 AM474_RS00610 31447145ae6037dcbe9ff2cfc75d999a 458 SUPERFAMILY SSF56112 14 266 9.14E-26 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS00610 31447145ae6037dcbe9ff2cfc75d999a 458 Pfam PF01636 Phosphotransferase enzyme family 67 255 1.4E-16 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS13750 9f9a379152a280447444c4ba92770603 554 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 554 0.0 T 29-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AM474_RS13750 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 230 493 1.1E-22 T 29-03-2018 AM474_RS13750 9f9a379152a280447444c4ba92770603 554 Gene3D G3DSA:3.40.1080.10 239 527 1.6E-41 T 29-03-2018 AM474_RS13750 9f9a379152a280447444c4ba92770603 554 SUPERFAMILY SSF100950 42 282 1.19E-35 T 29-03-2018 AM474_RS13750 9f9a379152a280447444c4ba92770603 554 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 554 6.9E-295 T 29-03-2018 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 AM474_RS13750 9f9a379152a280447444c4ba92770603 554 Gene3D G3DSA:3.40.1080.10 37 224 4.3E-30 T 29-03-2018 AM474_RS06265 dd0d41efb02cb265e62cbaa9f2255d43 366 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.7E-161 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM474_RS06265 dd0d41efb02cb265e62cbaa9f2255d43 366 PIRSF PIRSF007313 1 360 1.3E-156 T 29-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 PRINTS PR00355 Adrenodoxin signature 83 91 6.8E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 PRINTS PR00355 Adrenodoxin signature 42 52 6.8E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 PRINTS PR00355 Adrenodoxin signature 60 74 6.8E-9 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 SUPERFAMILY SSF54292 5 108 4.11E-30 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 Gene3D G3DSA:3.10.20.30 3 112 4.5E-30 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 3.9E-11 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS08320 edb15a1b1fb112aedaeaed2c772e8013 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 4.9E-56 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 19 256 1.5E-66 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.580 16 122 9.4E-33 T 29-03-2018 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 25 120 1.1E-5 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 Pfam PF01416 tRNA pseudouridine synthase 160 262 1.9E-31 T 29-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 PIRSF PIRSF001430 17 277 4.8E-74 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 SUPERFAMILY SSF55120 18 275 4.32E-91 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 18 261 34.62 T 29-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04805 c53d4ab4d842854d173d0c59077967fd 285 Gene3D G3DSA:3.30.70.660 123 260 1.2E-37 T 29-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 3.5E-36 T 29-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 SMART SM00984 320 424 2.3E-51 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 SUPERFAMILY SSF52413 311 435 6.67E-41 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 424 1.8E-31 T 29-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 SUPERFAMILY SSF48179 204 301 1.5E-32 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 SUPERFAMILY SSF51735 1 195 1.15E-53 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 PIRSF PIRSF500134 1 442 1.4E-181 T 29-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 6.5E-60 T 29-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 8.2E-135 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Gene3D G3DSA:3.40.50.720 228 436 2.8E-73 T 29-03-2018 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Gene3D G3DSA:1.20.5.100 205 227 5.8E-14 T 29-03-2018 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 PIRSF PIRSF000124 1 439 1.1E-141 T 29-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AM474_RS07125 0b373e91bd4ba916cd925098a97822fb 464 Gene3D G3DSA:3.40.50.720 1 202 3.3E-57 T 29-03-2018 AM474_RS07120 884709287c7087d516562e19117e499f 137 Pfam PF00893 Small Multidrug Resistance protein 44 112 1.2E-6 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS07120 884709287c7087d516562e19117e499f 137 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 5 125 20.876 T 29-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF AM474_RS07120 884709287c7087d516562e19117e499f 137 SUPERFAMILY SSF103481 37 122 1.57E-11 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 SUPERFAMILY SSF54534 262 362 2.42E-32 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Pfam PF13616 PPIC-type PPIASE domain 261 360 1.7E-28 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:3.10.50.40 258 386 5.0E-38 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:3.10.50.40 498 620 0.35 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:3.10.50.40 390 497 2.0E-5 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:1.10.4030.10 166 257 0.0047 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Gene3D G3DSA:1.10.4030.10 35 165 4.0E-19 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 Pfam PF13624 SurA N-terminal domain 1 164 2.4E-44 T 29-03-2018 AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 SUPERFAMILY SSF109998 199 236 6.41E-32 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM474_RS28305 f6a75ab36bd2390cf3eaa0d93ea0f6a3 621 SUPERFAMILY SSF109998 40 167 6.41E-32 T 29-03-2018 IPR027304 Trigger factor/SurA domain AM474_RS11995 998679d9cf9b71f06feddcb534caeb48 202 Gene3D G3DSA:1.20.1440.20 13 195 1.6E-54 T 29-03-2018 AM474_RS11995 998679d9cf9b71f06feddcb534caeb48 202 Pfam PF04011 LemA family 12 195 2.9E-64 T 29-03-2018 IPR007156 LemA AM474_RS11995 998679d9cf9b71f06feddcb534caeb48 202 SUPERFAMILY SSF140478 26 182 8.76E-54 T 29-03-2018 IPR023353 LemA-like domain AM474_RS18585 16c2a339cd88bd5e0d59862771a709e1 195 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 1.4E-63 T 29-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AM474_RS18585 16c2a339cd88bd5e0d59862771a709e1 195 SUPERFAMILY SSF102405 2 180 3.82E-64 T 29-03-2018 AM474_RS18585 16c2a339cd88bd5e0d59862771a709e1 195 Gene3D G3DSA:3.40.50.450 1 195 3.4E-62 T 29-03-2018 AM474_RS18585 16c2a339cd88bd5e0d59862771a709e1 195 Pfam PF03641 Possible lysine decarboxylase 48 177 5.3E-42 T 29-03-2018 IPR031100 LOG family AM474_RS11010 54edc7aef8ae498185443069908c0e67 476 Gene3D G3DSA:3.60.120.10 46 463 1.1E-94 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS11010 54edc7aef8ae498185443069908c0e67 476 SUPERFAMILY SSF56322 33 460 1.31E-100 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS11010 54edc7aef8ae498185443069908c0e67 476 Pfam PF00425 chorismate binding enzyme 200 452 2.4E-73 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS11010 54edc7aef8ae498185443069908c0e67 476 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 108 460 6.1E-122 T 29-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 AM474_RS18785 77cdefbbc8df2671676ca1ee4ff9d940 204 SUPERFAMILY SSF81342 5 197 2.98E-33 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS18785 77cdefbbc8df2671676ca1ee4ff9d940 204 Pfam PF01292 Prokaryotic cytochrome b561 6 185 1.0E-22 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS18785 77cdefbbc8df2671676ca1ee4ff9d940 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 159 181 3.4E-5 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM474_RS18785 77cdefbbc8df2671676ca1ee4ff9d940 204 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 8 31 3.4E-5 T 29-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 AM474_RS18785 77cdefbbc8df2671676ca1ee4ff9d940 204 Gene3D G3DSA:1.20.950.20 2 201 3.8E-33 T 29-03-2018 AM474_RS31315 2e31f49a346d9eadd7634c819748ee27 411 Gene3D G3DSA:3.50.50.60 134 266 3.9E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31315 2e31f49a346d9eadd7634c819748ee27 411 Gene3D G3DSA:3.50.50.60 9 133 1.4E-15 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31315 2e31f49a346d9eadd7634c819748ee27 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 132 1.2E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31315 2e31f49a346d9eadd7634c819748ee27 411 SUPERFAMILY SSF51905 11 152 2.71E-26 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31315 2e31f49a346d9eadd7634c819748ee27 411 SUPERFAMILY SSF51905 123 266 4.48E-20 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS08785 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Pfam PF00588 SpoU rRNA Methylase family 5 155 2.9E-34 T 29-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM474_RS08785 7c5b8f4d4100a7c0e26ebff6e2b69368 257 SUPERFAMILY SSF75217 4 170 1.18E-38 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS08785 7c5b8f4d4100a7c0e26ebff6e2b69368 257 PIRSF PIRSF004808 1 251 2.1E-72 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM474_RS08785 7c5b8f4d4100a7c0e26ebff6e2b69368 257 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 245 6.4E-76 T 29-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AM474_RS08785 7c5b8f4d4100a7c0e26ebff6e2b69368 257 Gene3D G3DSA:3.40.1280.10 1 166 3.2E-45 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS18365 ea74511066a4bb2f10806f838eb1e095 178 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 5 166 5.7E-30 T 29-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 Pfam PF00437 Type II/IV secretion system protein 114 377 1.5E-85 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.40.50.300 211 469 1.2E-63 T 29-03-2018 AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 305 319 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 SMART SM00382 238 359 7.2E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF52540 94 466 3.17E-101 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 Gene3D G3DSA:3.30.450.90 74 210 4.1E-46 T 29-03-2018 AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 3 466 3.7E-216 T 29-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 AM474_RS22125 aa3d86ec1f388b198895b8669fe4445b 469 SUPERFAMILY SSF160246 3 64 8.11E-7 T 29-03-2018 AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 61 5.0E-10 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 3.7E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 3.7E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.9E-18 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS02505 d78074a5f2be129ba1ed51f2d564bdfc 69 SUPERFAMILY SSF57716 35 68 9.84E-7 T 29-03-2018 AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 1.3E-48 T 29-03-2018 AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 SUPERFAMILY SSF51735 7 250 1.12E-66 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 9.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.2E-36 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS32235 a491ca8c0765f2bec44794e3056127d6 253 Gene3D G3DSA:3.40.50.720 1 252 2.2E-59 T 29-03-2018 AM474_RS02090 302f80e159777574c2aa3d6a39c5bb71 277 Gene3D G3DSA:3.40.50.1000 39 207 3.2E-23 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02090 302f80e159777574c2aa3d6a39c5bb71 277 PIRSF PIRSF019271 3 272 5.2E-64 T 29-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 AM474_RS02090 302f80e159777574c2aa3d6a39c5bb71 277 SUPERFAMILY SSF56784 52 253 3.17E-40 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02090 302f80e159777574c2aa3d6a39c5bb71 277 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 22 244 2.9E-31 T 29-03-2018 IPR005519 Acid phosphatase, class B-like AM474_RS10435 4e788495ac71e8dcc1d4d1f519ddbf4b 396 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.873 T 29-03-2018 IPR023495 Sugar efflux transporter, putative AM474_RS10435 4e788495ac71e8dcc1d4d1f519ddbf4b 396 SUPERFAMILY SSF103473 6 385 8.76E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10435 4e788495ac71e8dcc1d4d1f519ddbf4b 396 Gene3D G3DSA:1.20.1250.20 7 198 1.2E-25 T 29-03-2018 AM474_RS10435 4e788495ac71e8dcc1d4d1f519ddbf4b 396 Gene3D G3DSA:1.20.1250.20 199 386 1.1E-16 T 29-03-2018 AM474_RS10435 4e788495ac71e8dcc1d4d1f519ddbf4b 396 Pfam PF07690 Major Facilitator Superfamily 18 349 1.2E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS18270 7415547cc8e4b07c109eecc58c62a42b 470 Pfam PF00324 Amino acid permease 18 452 2.1E-115 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS18270 7415547cc8e4b07c109eecc58c62a42b 470 PIRSF PIRSF006060 1 466 4.6E-71 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS18270 7415547cc8e4b07c109eecc58c62a42b 470 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS02675 bfa4f84708627c67d646502368d49664 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS02675 bfa4f84708627c67d646502368d49664 310 SMART SM00382 30 213 4.1E-11 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS02675 bfa4f84708627c67d646502368d49664 310 Pfam PF00005 ABC transporter 21 165 8.4E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS02675 bfa4f84708627c67d646502368d49664 310 Gene3D G3DSA:3.40.50.300 1 267 4.6E-65 T 29-03-2018 AM474_RS02675 bfa4f84708627c67d646502368d49664 310 SUPERFAMILY SSF52540 4 234 8.88E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16020 69dd81208963d39ff8ef2ac344f4c7b4 178 Gene3D G3DSA:3.40.1410.10 3 171 4.3E-47 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS16020 69dd81208963d39ff8ef2ac344f4c7b4 178 SUPERFAMILY SSF64288 8 170 2.67E-49 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS16020 69dd81208963d39ff8ef2ac344f4c7b4 178 Pfam PF04345 Chorismate lyase 1 175 1.6E-77 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM474_RS16020 69dd81208963d39ff8ef2ac344f4c7b4 178 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 5 172 27.42 T 29-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 AM474_RS27790 472ecd2ecd44055197fc0dba12c3a0ea 276 Pfam PF16806 Antiactivator protein ExsD 42 274 5.7E-101 T 29-03-2018 IPR031835 Antiactivator protein ExsD AM474_RS24570 d67e7642da4cc5f004f0a8775bddab07 135 SUPERFAMILY SSF54593 1 127 3.36E-33 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS24570 d67e7642da4cc5f004f0a8775bddab07 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 110 1.3E-13 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS24570 d67e7642da4cc5f004f0a8775bddab07 135 Gene3D G3DSA:3.10.180.10 1 135 3.8E-30 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS31130 34bb1d981a586d7f449408bb1570bd23 362 SUPERFAMILY SSF51197 25 336 2.75E-82 T 29-03-2018 AM474_RS31130 34bb1d981a586d7f449408bb1570bd23 362 Gene3D G3DSA:3.60.130.10 19 339 9.8E-71 T 29-03-2018 AM474_RS31130 34bb1d981a586d7f449408bb1570bd23 362 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 334 3.5E-49 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 9.0E-106 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 Pfam PF00318 Ribosomal protein S2 9 224 8.7E-95 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 SUPERFAMILY SSF52313 6 231 4.45E-96 T 29-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.671 T 29-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.2E-37 T 29-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 29-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM474_RS07640 861a105354ee3f8f00326bcc74513910 246 Gene3D G3DSA:3.40.50.10490 5 245 6.3E-94 T 29-03-2018 AM474_RS27795 ad7585a900676877851904771c7c91a3 140 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 2 140 2.7E-58 T 29-03-2018 IPR013353 Type III secretion system chaperone YscB AM474_RS27795 ad7585a900676877851904771c7c91a3 140 Pfam PF05932 Tir chaperone protein (CesT) family 3 120 1.4E-28 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AM474_RS27795 ad7585a900676877851904771c7c91a3 140 SUPERFAMILY SSF69635 2 126 5.65E-42 T 29-03-2018 AM474_RS27795 ad7585a900676877851904771c7c91a3 140 Gene3D G3DSA:3.30.1460.10 1 134 3.0E-21 T 29-03-2018 AM474_RS17020 05187c61f4160ee0ecddd426dffdc88f 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 2.0E-103 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM474_RS17020 05187c61f4160ee0ecddd426dffdc88f 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 2.3E-75 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM474_RS17020 05187c61f4160ee0ecddd426dffdc88f 181 SUPERFAMILY SSF51182 1 178 1.03E-79 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS17020 05187c61f4160ee0ecddd426dffdc88f 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 4.2E-90 T 29-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AM474_RS17020 05187c61f4160ee0ecddd426dffdc88f 181 Gene3D G3DSA:2.60.120.10 1 179 1.2E-78 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS27350 9d49fc409bb18299c41509edc80ad86d 183 PIRSF PIRSF001296 1 183 5.5E-64 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM474_RS27350 9d49fc409bb18299c41509edc80ad86d 183 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 181 32.706 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM474_RS27350 9d49fc409bb18299c41509edc80ad86d 183 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 178 1.9E-56 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM474_RS27350 9d49fc409bb18299c41509edc80ad86d 183 Pfam PF02669 K+-transporting ATPase, c chain 6 178 2.3E-61 T 29-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 AM474_RS28545 7794aae5b24b40990b244750c8a4794c 401 SUPERFAMILY SSF55073 235 392 5.1E-43 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS28545 7794aae5b24b40990b244750c8a4794c 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 388 2.9E-41 T 29-03-2018 IPR000160 GGDEF domain AM474_RS28545 7794aae5b24b40990b244750c8a4794c 401 Gene3D G3DSA:3.30.70.270 224 400 6.7E-49 T 29-03-2018 AM474_RS28545 7794aae5b24b40990b244750c8a4794c 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 228 392 4.6E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS28545 7794aae5b24b40990b244750c8a4794c 401 SMART SM00267 219 393 1.3E-50 T 29-03-2018 IPR000160 GGDEF domain AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF12826 Helix-hairpin-helix motif 534 597 3.1E-21 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF12826 Helix-hairpin-helix motif 631 687 1.3E-8 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SUPERFAMILY SSF52113 714 788 5.23E-17 T 29-03-2018 IPR001357 BRCT domain AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:1.10.150.20 623 707 1.3E-14 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:1.10.150.20 456 526 1.7E-26 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 128 157 - T 29-03-2018 IPR018239 NAD-dependent DNA ligase, active site AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Hamap MF_01588 DNA ligase [ligA]. 5 787 52.848 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SUPERFAMILY SSF47781 618 704 7.41E-14 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 343 358 - T 29-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:1.10.287.610 1 70 3.6E-27 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SUPERFAMILY SSF56091 3 328 4.68E-118 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 617 1.0E-221 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 PIRSF PIRSF001604 1 622 1.1E-211 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 PIRSF PIRSF001604 618 792 2.6E-31 T 29-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:2.40.50.140 334 402 7.1E-34 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 458 1.3E-13 T 29-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SUPERFAMILY SSF47781 416 603 1.04E-52 T 29-03-2018 IPR010994 RuvA domain 2-like AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:1.10.150.20 576 618 0.017 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 713 787 1.1E-11 T 29-03-2018 IPR001357 BRCT domain AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 330 6.0E-125 T 29-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SMART SM00532 6 472 1.2E-255 T 29-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:1.10.150.20 527 575 2.0E-18 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SUPERFAMILY SSF50249 330 412 3.26E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 SMART SM00292 713 790 6.3E-9 T 29-03-2018 IPR001357 BRCT domain AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:3.30.470.30 132 252 9.6E-53 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 334 410 3.1E-35 T 29-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:3.30.1490.70 253 333 3.2E-21 T 29-03-2018 AM474_RS26770 6ab6c375b7655a2d6ea18b99b0f20e3c 794 Gene3D G3DSA:3.40.50.10190 720 791 4.5E-15 T 29-03-2018 IPR001357 BRCT domain AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Gene3D G3DSA:2.60.40.10 331 429 1.3E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 SMART SM01359 646 792 9.9E-29 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Gene3D G3DSA:2.60.40.10 744 904 1.4E-10 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Pfam PF01835 MG2 domain 332 428 4.6E-19 T 29-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 SMART SM01360 857 947 2.1E-26 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 647 792 4.0E-14 T 29-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 SUPERFAMILY SSF48239 1043 1147 3.88E-14 T 29-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Pfam PF00207 Alpha-2-macroglobulin family 857 944 1.3E-23 T 29-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Gene3D G3DSA:1.50.10.20 1038 1459 2.5E-19 T 29-03-2018 AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1045 1067 2.6E-4 T 29-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Gene3D G3DSA:2.60.40.10 233 306 0.43 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS20940 d39cf640415af98400a0476d6f5621cc 1516 Gene3D G3DSA:2.60.40.10 434 543 3.2E-4 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS01425 3f87a0c02dc9767b0fbb641792e5c61b 159 Pfam PF01638 HxlR-like helix-turn-helix 19 106 7.4E-25 T 29-03-2018 IPR002577 Helix-turn-helix, HxlR type AM474_RS01425 3f87a0c02dc9767b0fbb641792e5c61b 159 Gene3D G3DSA:1.10.10.10 1 158 4.7E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01425 3f87a0c02dc9767b0fbb641792e5c61b 159 SUPERFAMILY SSF46785 7 145 2.55E-44 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18690 638ea4c62429354115721f0d792f5585 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.8E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Gene3D G3DSA:3.40.190.10 252 298 0.003 T 29-03-2018 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Gene3D G3DSA:1.10.10.10 1 86 6.5E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Gene3D G3DSA:3.40.190.10 96 179 3.5E-9 T 29-03-2018 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 6.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 SUPERFAMILY SSF53850 88 291 1.05E-38 T 29-03-2018 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 SUPERFAMILY SSF46785 2 86 7.48E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Gene3D G3DSA:3.40.190.10 180 251 2.7E-16 T 29-03-2018 AM474_RS18690 638ea4c62429354115721f0d792f5585 298 Pfam PF03466 LysR substrate binding domain 93 292 2.2E-24 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 1.9E-69 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 SUPERFAMILY SSF55681 10 291 1.57E-136 T 29-03-2018 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 291 1.7E-152 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 299 1.6E-162 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 293 61.704 T 29-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:3.30.930.10 1 216 3.8E-91 T 29-03-2018 AM474_RS14815 9c5e64ae51abacc04b9793a3ffdb9532 315 Gene3D G3DSA:1.20.58.180 218 294 2.7E-33 T 29-03-2018 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:1.10.3210.10 139 389 3.1E-29 T 29-03-2018 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 SMART SM00448 8 123 2.7E-14 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF109604 150 397 1.35E-37 T 29-03-2018 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 SUPERFAMILY SSF52172 10 127 1.25E-22 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-22 T 29-03-2018 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF00072 Response regulator receiver domain 10 123 9.7E-13 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13415 d6f44c334d38537c01c065c3ec4b5eda 399 Pfam PF08668 HDOD domain 162 348 9.4E-40 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 SUPERFAMILY SSF53850 86 283 2.17E-16 T 29-03-2018 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 Pfam PF03466 LysR substrate binding domain 86 297 5.0E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 Gene3D G3DSA:3.40.190.10 86 174 0.0039 T 29-03-2018 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 Gene3D G3DSA:1.10.10.10 2 84 1.6E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 SUPERFAMILY SSF46785 3 86 1.09E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.4E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29705 e94196a58e0c05de48fc64b12cc8b0ba 300 Gene3D G3DSA:3.40.190.10 175 262 3.7E-9 T 29-03-2018 AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.1E-8 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 184 1.8E-5 T 29-03-2018 AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 Pfam PF00106 short chain dehydrogenase 10 196 2.7E-40 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 Gene3D G3DSA:3.40.50.720 4 295 2.6E-62 T 29-03-2018 AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.4E-24 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 SUPERFAMILY SSF51735 5 252 1.03E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06535 b3765b56c7f3695814edcfedc241ff40 303 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS05535 4766c43308f14d1cff65b05c2b7a4c59 269 SUPERFAMILY SSF53649 2 255 7.1E-50 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS05535 4766c43308f14d1cff65b05c2b7a4c59 269 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 210 7.2E-16 T 29-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 AM474_RS05535 4766c43308f14d1cff65b05c2b7a4c59 269 Gene3D G3DSA:3.40.720.10 2 261 7.7E-33 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS12840 9433f0a69551f271c5f8d5c3721884fc 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.0E-85 T 29-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AM474_RS12840 9433f0a69551f271c5f8d5c3721884fc 223 Gene3D G3DSA:3.40.50.300 1 222 6.3E-63 T 29-03-2018 AM474_RS12840 9433f0a69551f271c5f8d5c3721884fc 223 Pfam PF00005 ABC transporter 18 165 1.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS12840 9433f0a69551f271c5f8d5c3721884fc 223 SUPERFAMILY SSF52540 1 218 1.06E-66 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12840 9433f0a69551f271c5f8d5c3721884fc 223 SMART SM00382 27 214 6.8E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20725 eabea2c0dee8d167c385f92aa9b86966 203 SUPERFAMILY SSF52540 4 196 2.15E-36 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20725 eabea2c0dee8d167c385f92aa9b86966 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 189 2.0E-52 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM474_RS20725 eabea2c0dee8d167c385f92aa9b86966 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 198 26.74 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM474_RS20725 eabea2c0dee8d167c385f92aa9b86966 203 Pfam PF01121 Dephospho-CoA kinase 5 181 1.7E-68 T 29-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM474_RS20725 eabea2c0dee8d167c385f92aa9b86966 203 Gene3D G3DSA:3.40.50.300 1 201 4.5E-43 T 29-03-2018 AM474_RS05590 1bc3aed8d76f3e04674ced24e3083f05 248 Gene3D G3DSA:3.40.190.10 17 122 1.2E-7 T 29-03-2018 AM474_RS05590 1bc3aed8d76f3e04674ced24e3083f05 248 SUPERFAMILY SSF53850 19 240 1.99E-30 T 29-03-2018 AM474_RS05590 1bc3aed8d76f3e04674ced24e3083f05 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 239 1.6E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS05590 1bc3aed8d76f3e04674ced24e3083f05 248 Gene3D G3DSA:3.40.190.10 123 198 1.2E-7 T 29-03-2018 AM474_RS32225 afe245778069cc37f7ab0c16d8ab59c8 163 SUPERFAMILY SSF54427 1 163 5.47E-51 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS32225 afe245778069cc37f7ab0c16d8ab59c8 163 Pfam PF00866 Ring hydroxylating beta subunit 15 155 8.3E-48 T 29-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM474_RS32225 afe245778069cc37f7ab0c16d8ab59c8 163 Gene3D G3DSA:3.10.450.50 2 163 4.2E-28 T 29-03-2018 AM474_RS32225 afe245778069cc37f7ab0c16d8ab59c8 163 TIGRFAM TIGR03231 anthran_1_2_B: anthranilate 1,2-dioxygenase, small subunit 9 163 3.5E-95 T 29-03-2018 IPR017640 Anthranilate 1,2-dioxygenase, small subunit KEGG: 00627+1.14.12.1|MetaCyc: PWY-2421|MetaCyc: PWY-5648|MetaCyc: PWY-6079 AM474_RS14395 c5e5a2236f9cbe58ee2e8537e4c45264 154 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 146 5.0E-50 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM474_RS14395 c5e5a2236f9cbe58ee2e8537e4c45264 154 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 11 143 6.8E-44 T 29-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN AM474_RS08120 48fa3e468d5312323f9dd9931601d13c 249 Gene3D G3DSA:3.40.50.1110 50 243 5.0E-23 T 29-03-2018 AM474_RS08120 48fa3e468d5312323f9dd9931601d13c 249 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 229 4.9E-16 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS08120 48fa3e468d5312323f9dd9931601d13c 249 SUPERFAMILY SSF52266 51 239 2.82E-31 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS20475 83bd2ac524902cb36dd944b508316010 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 160 1.7E-74 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM474_RS20475 83bd2ac524902cb36dd944b508316010 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 92.142 T 29-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria AM474_RS20475 83bd2ac524902cb36dd944b508316010 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.5E-35 T 29-03-2018 IPR005134 Uncharacterised protein family UPF0114 AM474_RS04790 c496e844697096c439d604c785dd66da 429 SUPERFAMILY SSF53623 3 283 1.12E-86 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 Gene3D G3DSA:3.40.1190.10 1 285 1.5E-75 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 420 7.7E-93 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 SUPERFAMILY SSF53244 286 422 2.75E-26 T 29-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 PIRSF PIRSF001563 1 426 2.4E-100 T 29-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 Pfam PF08245 Mur ligase middle domain 47 186 5.8E-11 T 29-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM474_RS04790 c496e844697096c439d604c785dd66da 429 Gene3D G3DSA:3.90.190.20 286 429 3.1E-22 T 29-03-2018 AM474_RS18825 faab9f432fdf1dff14e78eae25ed06b7 179 Gene3D G3DSA:2.40.33.20 1 179 1.7E-37 T 29-03-2018 AM474_RS18825 faab9f432fdf1dff14e78eae25ed06b7 179 SUPERFAMILY SSF50800 2 169 1.41E-41 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS18825 faab9f432fdf1dff14e78eae25ed06b7 179 Pfam PF03473 MOSC domain 56 164 4.8E-6 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM474_RS13945 505984e658861c185c460572a62788f2 278 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 64 278 3.8E-18 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS13945 505984e658861c185c460572a62788f2 278 SUPERFAMILY SSF111364 39 278 6.41E-76 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS13945 505984e658861c185c460572a62788f2 278 Gene3D G3DSA:2.40.230.20 31 275 1.3E-74 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-32 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 1.1E-30 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.3E-18 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.3E-18 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.3E-18 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS20735 c030480651c4bc1910b3a7fc8e5c2982 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.3E-18 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS15165 6ee128f024dfac13926445ec801461e9 288 Gene3D G3DSA:3.40.1190.20 1 288 3.4E-65 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS15165 6ee128f024dfac13926445ec801461e9 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 287 3.8E-111 T 29-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM474_RS15165 6ee128f024dfac13926445ec801461e9 288 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 4 288 53.905 T 29-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 AM474_RS15165 6ee128f024dfac13926445ec801461e9 288 SUPERFAMILY SSF53613 4 281 1.71E-71 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS15165 6ee128f024dfac13926445ec801461e9 288 Pfam PF08543 Phosphomethylpyrimidine kinase 77 263 3.5E-13 T 29-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM474_RS05340 7f48023529f0e1a6cf51d8323fa574ce 351 Pfam PF13439 Glycosyltransferase Family 4 14 165 5.6E-15 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS05340 7f48023529f0e1a6cf51d8323fa574ce 351 Pfam PF13692 Glycosyl transferases group 1 180 292 8.2E-18 T 29-03-2018 AM474_RS05340 7f48023529f0e1a6cf51d8323fa574ce 351 Gene3D G3DSA:3.40.50.2000 1 169 2.6E-13 T 29-03-2018 AM474_RS05340 7f48023529f0e1a6cf51d8323fa574ce 351 SUPERFAMILY SSF53756 1 327 7.85E-64 T 29-03-2018 AM474_RS05340 7f48023529f0e1a6cf51d8323fa574ce 351 Gene3D G3DSA:3.40.50.2000 170 316 1.7E-30 T 29-03-2018 AM474_RS27250 79ecd4a80c29b2a6a5c46ab7477fdd65 113 Pfam PF14333 Domain of unknown function (DUF4389) 8 83 2.6E-29 T 29-03-2018 IPR025498 Protein of unknown function DUF4389 AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 Pfam PF00227 Proteasome subunit 2 171 2.3E-19 T 29-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 PIRSF PIRSF039093 1 176 5.4E-83 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 173 40.871 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 173 3.1E-83 T 29-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 Gene3D G3DSA:3.60.20.10 2 175 1.9E-26 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS17615 c24bf4313abc3c7ffe0a8168999ef1dc 177 SUPERFAMILY SSF56235 2 173 3.66E-54 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS27555 170254279b8d540d4e199c2694701bc4 289 Pfam PF09850 Type VI secretion system protein DotU 62 264 1.7E-66 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS27555 170254279b8d540d4e199c2694701bc4 289 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 61 270 6.2E-73 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 Gene3D G3DSA:3.90.1670.10 19 309 3.6E-89 T 29-03-2018 IPR024064 FdhE-like AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 16 304 3.4E-98 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 PIRSF PIRSF018296 1 309 2.6E-113 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 307 42.731 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 SUPERFAMILY SSF144020 20 307 4.18E-88 T 29-03-2018 IPR024064 FdhE-like AM474_RS19180 7c300fa9f1fdddffde543cfcef78d3f6 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 306 8.1E-155 T 29-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 SUPERFAMILY SSF56219 4 258 3.14E-79 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 258 3.5E-70 T 29-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 Gene3D G3DSA:3.60.10.10 3 259 8.8E-52 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 30 39 - T 29-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 251 1.9E-20 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS10730 24136ea6cd8df7bf0af47b0cace002fc 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 4 257 3.3E-70 T 29-03-2018 AM474_RS08905 ca5bc6bb4b292fb41f8840f1aea80999 336 Gene3D G3DSA:3.40.50.150 49 314 2.5E-54 T 29-03-2018 AM474_RS08905 ca5bc6bb4b292fb41f8840f1aea80999 336 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 16 316 55.287 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM474_RS08905 ca5bc6bb4b292fb41f8840f1aea80999 336 Pfam PF05971 Protein of unknown function (DUF890) 14 314 8.9E-155 T 29-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 AM474_RS08905 ca5bc6bb4b292fb41f8840f1aea80999 336 PIRSF PIRSF029038 6 326 6.9E-157 T 29-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 AM474_RS08905 ca5bc6bb4b292fb41f8840f1aea80999 336 SUPERFAMILY SSF53335 54 313 1.49E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS03390 acc56e837e219a2afad35a45a51ad93c 249 Gene3D G3DSA:3.40.50.150 6 239 2.7E-24 T 29-03-2018 AM474_RS03390 acc56e837e219a2afad35a45a51ad93c 249 Pfam PF01564 Spermine/spermidine synthase domain 58 172 4.8E-5 T 29-03-2018 AM474_RS03390 acc56e837e219a2afad35a45a51ad93c 249 SUPERFAMILY SSF53335 5 197 2.98E-40 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.9E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 SUPERFAMILY SSF53850 96 297 4.34E-43 T 29-03-2018 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 SUPERFAMILY SSF46785 5 85 1.81E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 7.6E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 Gene3D G3DSA:3.40.190.10 95 183 1.4E-16 T 29-03-2018 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 Pfam PF03466 LysR substrate binding domain 97 296 4.1E-29 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 Gene3D G3DSA:3.40.190.10 184 271 1.9E-13 T 29-03-2018 AM474_RS29920 c79038d31f3879be33d52d127cba88e2 301 Gene3D G3DSA:1.10.10.10 3 87 3.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 PIRSF PIRSF028103 1 171 5.1E-56 T 29-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 Pfam PF01842 ACT domain 96 125 5.3E-7 T 29-03-2018 IPR002912 ACT domain AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 Pfam PF13740 ACT domain 3 65 1.0E-11 T 29-03-2018 AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 SUPERFAMILY SSF55021 87 168 1.47E-17 T 29-03-2018 AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 Gene3D G3DSA:3.30.70.260 2 80 4.6E-13 T 29-03-2018 AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 SUPERFAMILY SSF55021 1 67 4.2E-14 T 29-03-2018 AM474_RS12265 60705d0f06021c9201519d2ceb20e2c2 171 Gene3D G3DSA:3.30.70.260 85 171 8.4E-15 T 29-03-2018 AM474_RS13735 001cebb64f2c2e0a7b3b1b4066861275 287 Gene3D G3DSA:3.90.226.10 4 271 5.2E-38 T 29-03-2018 AM474_RS13735 001cebb64f2c2e0a7b3b1b4066861275 287 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 11 281 3.2E-117 T 29-03-2018 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 AM474_RS13735 001cebb64f2c2e0a7b3b1b4066861275 287 SUPERFAMILY SSF52096 4 236 8.71E-37 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS13735 001cebb64f2c2e0a7b3b1b4066861275 287 Pfam PF01039 Carboxyl transferase domain 18 235 1.8E-14 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS20170 27f30ddac53607428588da0c9735069d 147 SUPERFAMILY SSF54427 3 141 1.2E-24 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS20170 27f30ddac53607428588da0c9735069d 147 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 7 135 2.1E-42 T 29-03-2018 IPR011721 Conserved hypothetical protein CHP02096 AM474_RS20170 27f30ddac53607428588da0c9735069d 147 Gene3D G3DSA:3.10.450.50 2 135 3.5E-15 T 29-03-2018 AM474_RS20170 27f30ddac53607428588da0c9735069d 147 Pfam PF07366 SnoaL-like polyketide cyclase 15 134 3.7E-13 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS11020 8958da8d76572fd50d2c39f5842afd04 462 Pfam PF07690 Major Facilitator Superfamily 21 358 4.0E-46 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS11020 8958da8d76572fd50d2c39f5842afd04 462 SUPERFAMILY SSF103473 14 395 3.4E-69 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS11020 8958da8d76572fd50d2c39f5842afd04 462 Gene3D G3DSA:1.20.1250.20 209 402 9.4E-20 T 29-03-2018 AM474_RS11020 8958da8d76572fd50d2c39f5842afd04 462 Gene3D G3DSA:1.20.1250.20 6 207 3.5E-37 T 29-03-2018 AM474_RS28830 1f553f1c38730f7960365dfd93ec070c 178 SUPERFAMILY SSF54197 3 109 2.34E-16 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS28830 1f553f1c38730f7960365dfd93ec070c 178 Gene3D G3DSA:3.30.428.10 1 158 1.7E-11 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS17160 d115299fa9442ae24ea8a295734fe41e 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 49.365 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM474_RS17160 d115299fa9442ae24ea8a295734fe41e 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 1.9E-117 T 29-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AM474_RS17160 d115299fa9442ae24ea8a295734fe41e 256 SUPERFAMILY SSF51366 3 256 2.67E-84 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS17160 d115299fa9442ae24ea8a295734fe41e 256 Gene3D G3DSA:3.20.20.70 5 252 4.9E-68 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS17160 d115299fa9442ae24ea8a295734fe41e 256 Pfam PF00977 Histidine biosynthesis protein 6 240 1.3E-92 T 29-03-2018 IPR006062 Histidine biosynthesis GO:0000105 AM474_RS17535 fe6b4748ea4c43b9e966898fc0f13814 111 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 4.1E-29 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM474_RS17535 fe6b4748ea4c43b9e966898fc0f13814 111 Gene3D G3DSA:1.10.287.1080 1 98 7.3E-22 T 29-03-2018 AM474_RS17535 fe6b4748ea4c43b9e966898fc0f13814 111 SUPERFAMILY SSF101386 3 96 6.32E-25 T 29-03-2018 AM474_RS17535 fe6b4748ea4c43b9e966898fc0f13814 111 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 21.011 T 29-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AM474_RS17535 fe6b4748ea4c43b9e966898fc0f13814 111 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 95 1.6E-17 T 29-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AM474_RS31015 09cc74fcd77732e950ed85ba6e472c33 230 Gene3D G3DSA:3.40.50.360 18 215 6.1E-44 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS31015 09cc74fcd77732e950ed85ba6e472c33 230 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 20 216 3.4E-121 T 29-03-2018 IPR014063 Arsenate resistance ArsH AM474_RS31015 09cc74fcd77732e950ed85ba6e472c33 230 SUPERFAMILY SSF52218 21 217 1.4E-62 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS31015 09cc74fcd77732e950ed85ba6e472c33 230 Pfam PF03358 NADPH-dependent FMN reductase 24 166 1.6E-26 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.5E-17 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00895 77 201 5.6E-23 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF46785 4 71 5.82E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SMART SM00345 9 67 2.5E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Pfam PF07729 FCD domain 77 198 1.2E-26 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.20.120.530 70 217 8.0E-33 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 Gene3D G3DSA:1.10.10.10 2 68 5.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15120 9098f33bb7a1698ecd0f1b4487a6d4f6 226 SUPERFAMILY SSF48008 74 210 1.31E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS06800 385f25e4e9c86a4016a6372814953461 426 Gene3D G3DSA:3.40.50.2000 256 397 1.2E-28 T 29-03-2018 AM474_RS06800 385f25e4e9c86a4016a6372814953461 426 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 135 8.8E-28 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS06800 385f25e4e9c86a4016a6372814953461 426 SUPERFAMILY SSF53756 1 415 1.22E-82 T 29-03-2018 AM474_RS06800 385f25e4e9c86a4016a6372814953461 426 Gene3D G3DSA:3.40.50.2000 1 255 1.2E-39 T 29-03-2018 AM474_RS09540 ae3e9cfb92148ef47a0755a731648342 144 Gene3D G3DSA:3.10.180.10 1 144 1.6E-17 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS09540 ae3e9cfb92148ef47a0755a731648342 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 127 4.7E-5 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS09540 ae3e9cfb92148ef47a0755a731648342 144 SUPERFAMILY SSF54593 8 133 6.07E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.90.1170.50 200 349 2.0E-29 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SUPERFAMILY SSF56003 12 256 5.93E-47 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 445 617 3.9E-29 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 PIRSF PIRSF036389 4 769 1.3E-281 T 29-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 36 2.4E-5 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 332 614 3.9E-28 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 628 709 9.2E-15 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 60 191 7.7E-17 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SUPERFAMILY SSF56003 334 762 1.57E-111 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 42 199 2.4E-39 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 350 444 1.1E-27 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 Gene3D G3DSA:3.30.365.10 618 765 5.4E-36 T 29-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AM474_RS31485 5e9fe1cf8ff88af91180dd8a9e8de51b 771 SMART SM01008 223 312 4.6E-24 T 29-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AM474_RS06170 6281628f3e8bab84d4c44a56e1870634 346 Gene3D G3DSA:3.60.110.10 1 345 2.2E-68 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS06170 6281628f3e8bab84d4c44a56e1870634 346 Hamap MF_01242 Aliphatic amidase [amiE]. 1 340 87.757 T 29-03-2018 IPR023719 Aliphatic amidase GO:0004040 KEGG: 00330+3.5.1.4|KEGG: 00360+3.5.1.4|KEGG: 00380+3.5.1.4|KEGG: 00627+3.5.1.4|KEGG: 00643+3.5.1.4|MetaCyc: PWY-3161|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 AM474_RS06170 6281628f3e8bab84d4c44a56e1870634 346 SUPERFAMILY SSF56317 11 275 1.06E-56 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS06170 6281628f3e8bab84d4c44a56e1870634 346 Pfam PF00795 Carbon-nitrogen hydrolase 15 267 9.4E-54 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 Gene3D G3DSA:3.10.310.10 1 124 4.7E-19 T 29-03-2018 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 276 6.8E-37 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 SUPERFAMILY SSF54506 1 280 4.19E-50 T 29-03-2018 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 Gene3D G3DSA:3.10.310.10 125 269 2.4E-32 T 29-03-2018 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 PIRSF PIRSF016184 1 282 2.4E-82 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS19680 edf2287da7a9482ec8e2f3950a710058 284 Pfam PF02567 Phenazine biosynthesis-like protein 8 271 9.2E-32 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF00557 Metallopeptidase family M24 184 414 9.6E-65 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 SMART SM01011 4 138 2.6E-69 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.40.350.10 2 165 2.0E-51 T 29-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF55920 177 437 3.14E-86 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 SUPERFAMILY SSF53092 4 176 1.41E-56 T 29-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 Gene3D G3DSA:3.90.230.10 166 444 8.3E-87 T 29-03-2018 AM474_RS16710 d4ee2d180c1386a1a60933d03857e546 444 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 1.3E-36 T 29-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 SMART SM00474 6 174 1.8E-35 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 Pfam PF00570 HRDC domain 215 282 3.3E-17 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF53098 5 212 1.6E-60 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF47819 297 372 9.91E-16 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 SMART SM00341 212 292 1.1E-11 T 29-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 Gene3D G3DSA:1.10.150.80 197 296 3.7E-23 T 29-03-2018 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 Gene3D G3DSA:3.30.420.10 5 196 1.3E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 SUPERFAMILY SSF47819 197 303 2.62E-29 T 29-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 Pfam PF01612 3'-5' exonuclease 6 173 2.0E-38 T 29-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 Hamap MF_01899 Ribonuclease D [rnd]. 6 372 43.397 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM474_RS25535 d1e60a7e88e66298aaf6f86d22f79eea 374 TIGRFAM TIGR01388 rnd: ribonuclease D 8 373 4.2E-157 T 29-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AM474_RS06320 7740fd3ba6dab86ff9d20468803a9fc9 100 Gene3D G3DSA:3.30.70.100 1 93 3.0E-20 T 29-03-2018 AM474_RS06320 7740fd3ba6dab86ff9d20468803a9fc9 100 SUPERFAMILY SSF54909 3 89 5.37E-23 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS06320 7740fd3ba6dab86ff9d20468803a9fc9 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 74 1.0E-18 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 Pfam PF13622 Thioesterase-like superfamily 33 282 2.4E-62 T 29-03-2018 AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 1.9E-91 T 29-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 Gene3D G3DSA:3.10.129.10 2 116 1.2E-42 T 29-03-2018 AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 5 114 7.46E-41 T 29-03-2018 IPR029069 HotDog domain AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 SUPERFAMILY SSF54637 117 285 1.45E-60 T 29-03-2018 IPR029069 HotDog domain AM474_RS09465 293bdae383efa8c5c0aef6ab6611e4cc 289 Gene3D G3DSA:3.10.129.10 131 286 6.2E-55 T 29-03-2018 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 Pfam PF02342 TerD domain 66 154 1.0E-8 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 Gene3D G3DSA:2.60.60.30 40 146 3.0E-12 T 29-03-2018 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 SUPERFAMILY SSF50494 178 343 9.5E-35 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 PRINTS PR00834 HtrA/DegQ protease family signature 213 233 5.8E-8 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 PRINTS PR00834 HtrA/DegQ protease family signature 311 328 5.8E-8 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 PRINTS PR00834 HtrA/DegQ protease family signature 254 278 5.8E-8 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 PRINTS PR00834 HtrA/DegQ protease family signature 289 306 5.8E-8 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 PRINTS PR00834 HtrA/DegQ protease family signature 187 199 5.8E-8 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 Gene3D G3DSA:2.40.10.10 147 254 3.7E-16 T 29-03-2018 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 Gene3D G3DSA:2.40.10.10 255 347 4.0E-19 T 29-03-2018 AM474_RS01905 315762e6ce788567a44200a51b8dd818 379 Pfam PF13365 Trypsin-like peptidase domain 185 318 2.2E-24 T 29-03-2018 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 Gene3D G3DSA:1.20.58.100 439 533 1.6E-27 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 3.8E-13 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 Gene3D G3DSA:3.50.50.60 1 438 9.0E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF46977 425 529 1.57E-31 T 29-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 PIRSF PIRSF000171 336 533 4.6E-11 T 29-03-2018 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 PIRSF PIRSF000171 1 323 1.5E-22 T 29-03-2018 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF56425 238 353 8.07E-44 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 Pfam PF00890 FAD binding domain 8 392 3.8E-107 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 5.3E-9 T 29-03-2018 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.3E-9 T 29-03-2018 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 520 3.4E-201 T 29-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF51905 356 448 1.5E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS22450 bd3d1d150a8f39f4396815b8bb01a56a 538 SUPERFAMILY SSF51905 3 255 1.5E-72 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 Gene3D G3DSA:3.40.190.10 175 263 1.0E-16 T 29-03-2018 AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 Gene3D G3DSA:1.10.10.10 5 93 9.4E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.1E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 SUPERFAMILY SSF53850 92 294 1.54E-33 T 29-03-2018 AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 Pfam PF03466 LysR substrate binding domain 92 292 6.2E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 Gene3D G3DSA:3.40.190.10 94 174 2.9E-18 T 29-03-2018 AM474_RS24865 9c32763b7f579c7a22508f9393d5fcd6 296 SUPERFAMILY SSF46785 8 113 1.02E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 4.7E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 Gene3D G3DSA:3.30.450.40 6 115 0.17 T 29-03-2018 IPR029016 GAF domain-like AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 252 9.8E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 Gene3D G3DSA:1.10.10.10 140 260 1.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 SMART SM00421 199 256 3.0E-17 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07350 25f872dd2fc6076195a5d01a68b23ab3 261 SUPERFAMILY SSF46894 196 258 3.03E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.6E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 Pfam PF00561 alpha/beta hydrolase fold 28 137 6.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 SUPERFAMILY SSF53474 5 285 1.76E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27285 f838280137efbaf6ce302086531cdf15 286 Gene3D G3DSA:3.40.50.1820 2 280 3.2E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12310 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF48498 79 187 2.91E-18 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS12310 905f119326c4275c575ab4f87ed6d741 189 Gene3D G3DSA:1.10.357.10 59 188 3.5E-15 T 29-03-2018 AM474_RS12310 905f119326c4275c575ab4f87ed6d741 189 SUPERFAMILY SSF46689 8 72 1.64E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS12310 905f119326c4275c575ab4f87ed6d741 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 7.0E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12310 905f119326c4275c575ab4f87ed6d741 189 Gene3D G3DSA:1.10.10.60 2 58 1.1E-10 T 29-03-2018 AM474_RS19995 448a602cbf3d44514e3a4e26bac76b57 252 Gene3D G3DSA:3.40.50.720 1 248 1.9E-71 T 29-03-2018 AM474_RS19995 448a602cbf3d44514e3a4e26bac76b57 252 SUPERFAMILY SSF69572 2 247 2.49E-83 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM474_RS19995 448a602cbf3d44514e3a4e26bac76b57 252 Pfam PF00899 ThiF family 10 243 6.0E-60 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 Gene3D G3DSA:1.10.10.60 230 264 4.2E-10 T 29-03-2018 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 Gene3D G3DSA:1.10.10.60 265 316 1.9E-10 T 29-03-2018 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 SUPERFAMILY SSF52317 5 194 8.68E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 Gene3D G3DSA:3.40.50.880 1 229 8.8E-56 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 SUPERFAMILY SSF46689 266 315 6.45E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 Pfam PF01965 DJ-1/PfpI family 5 173 4.5E-10 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 SUPERFAMILY SSF46689 212 263 2.51E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 SMART SM00342 229 312 4.4E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS08610 8e257e503e5b9d16dcf5a900b4c92eb7 317 Pfam PF12833 Helix-turn-helix domain 235 313 8.1E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 SUPERFAMILY SSF55021 272 366 2.98E-13 T 29-03-2018 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 Gene3D G3DSA:3.40.50.300 25 277 8.4E-78 T 29-03-2018 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 SUPERFAMILY SSF52540 29 263 2.08E-81 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 SMART SM00382 54 241 1.3E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 Pfam PF09383 NIL domain 291 361 1.0E-11 T 29-03-2018 IPR018449 NIL domain AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 Gene3D G3DSA:3.30.70.260 278 367 4.5E-21 T 29-03-2018 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 Pfam PF00005 ABC transporter 45 193 4.8E-35 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS31340 254da4e41878820ccb09f04b759accd5 369 SMART SM00930 288 363 8.4E-13 T 29-03-2018 IPR018449 NIL domain AM474_RS02335 5a671fd5ef98590f96b7c64714b61c3b 1074 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 844 918 2.5E-29 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS02335 5a671fd5ef98590f96b7c64714b61c3b 1074 Gene3D G3DSA:1.20.58.60 10 476 0.083 T 29-03-2018 AM474_RS02335 5a671fd5ef98590f96b7c64714b61c3b 1074 Pfam PF06791 Prophage tail length tape measure protein 222 413 1.1E-33 T 29-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal AM474_RS02335 5a671fd5ef98590f96b7c64714b61c3b 1074 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 707 1023 1.3E-51 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS29265 58967e2d191910077d1674c1702d5cb0 608 SUPERFAMILY SSF53474 350 602 7.69E-60 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29265 58967e2d191910077d1674c1702d5cb0 608 SUPERFAMILY SSF82171 68 294 7.85E-6 T 29-03-2018 AM474_RS29265 58967e2d191910077d1674c1702d5cb0 608 Gene3D G3DSA:2.130.10.120 42 338 7.2E-6 T 29-03-2018 AM474_RS29265 58967e2d191910077d1674c1702d5cb0 608 Pfam PF00326 Prolyl oligopeptidase family 399 606 2.2E-36 T 29-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AM474_RS29265 58967e2d191910077d1674c1702d5cb0 608 Gene3D G3DSA:3.40.50.1820 339 600 2.1E-47 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 SUPERFAMILY SSF55874 331 437 9.17E-26 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Gene3D G3DSA:1.10.287.130 215 285 1.4E-11 T 29-03-2018 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Pfam PF08521 Two-component sensor kinase N-terminal 16 147 3.0E-9 T 29-03-2018 IPR013727 Two-component sensor kinase, N-terminal AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 SMART SM00387 334 440 2.7E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 SUPERFAMILY SSF47384 208 287 7.26E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 439 4.6E-15 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Gene3D G3DSA:1.20.5.1040 1 58 6.2E-8 T 29-03-2018 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Gene3D G3DSA:1.20.5.1040 118 172 0.043 T 29-03-2018 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 6.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.8E-6 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Gene3D G3DSA:3.30.565.10 289 440 2.0E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 7.7E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS32045 734696c911e3d3cbe224c27b709ba8de 440 SMART SM00388 225 289 3.8E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 22 496 1.2E-20 T 29-03-2018 AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 Gene3D G3DSA:3.40.50.300 529 710 1.2E-10 T 29-03-2018 AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 SMART SM00491 562 695 1.1E-29 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 516 689 8.54E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 475 489 8.54E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 57 105 8.54E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 SUPERFAMILY SSF52540 208 283 8.54E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24085 244417ba132609a70f0fbe4822514b12 714 Pfam PF13307 Helicase C-terminal domain 553 708 4.3E-34 T 29-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 Gene3D G3DSA:1.10.10.10 1 88 5.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 177 8.9E-34 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 SUPERFAMILY SSF46785 87 163 6.89E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 Gene3D G3DSA:1.10.10.10 89 180 5.6E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 SUPERFAMILY SSF46785 5 86 3.81E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05235 56f5b162356f80f2c4f79952b51ed7a5 332 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 172 2.5E-49 T 29-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 SUPERFAMILY SSF54373 261 348 1.11E-16 T 29-03-2018 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 Pfam PF01266 FAD dependent oxidoreductase 6 385 9.5E-68 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 Gene3D G3DSA:3.30.9.10 140 201 3.4E-5 T 29-03-2018 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 Gene3D G3DSA:3.30.9.10 202 347 4.7E-35 T 29-03-2018 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 SUPERFAMILY SSF51905 348 411 1.42E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 SUPERFAMILY SSF51905 107 261 1.42E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 SUPERFAMILY SSF51905 4 57 1.42E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30300 97ad78731132317acd2c7d15b653625a 417 Gene3D G3DSA:3.40.50.20 1 139 4.5E-4 T 29-03-2018 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 Gene3D G3DSA:3.50.50.60 1 362 9.3E-37 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.5E-11 T 29-03-2018 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-11 T 29-03-2018 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.5E-11 T 29-03-2018 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.5E-11 T 29-03-2018 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 8.4E-149 T 29-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 6.8E-123 T 29-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 SUPERFAMILY SSF51905 4 178 1.1E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 SUPERFAMILY SSF51905 268 383 1.1E-47 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16715 0f3e93d5dd9b61a7460fe9e45619ecd9 394 Pfam PF01494 FAD binding domain 4 317 1.8E-16 T 29-03-2018 IPR002938 FAD-binding domain GO:0071949 AM474_RS06920 d1044387e931816653b0b51429161ded 345 SMART SM01236 187 289 2.7E-20 T 29-03-2018 AM474_RS06920 d1044387e931816653b0b51429161ded 345 Gene3D G3DSA:1.20.910.10 115 345 7.0E-30 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS06920 d1044387e931816653b0b51429161ded 345 SUPERFAMILY SSF48613 120 334 7.79E-31 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS06920 d1044387e931816653b0b51429161ded 345 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 20 106 1.5E-43 T 29-03-2018 IPR029474 Haem-oxygenase-associated, N-terminal helices AM474_RS06920 d1044387e931816653b0b51429161ded 345 Pfam PF14518 Iron-containing redox enzyme 154 321 4.8E-14 T 29-03-2018 IPR028201 PqqC-like protein AM474_RS06920 d1044387e931816653b0b51429161ded 345 Gene3D G3DSA:1.10.1240.20 22 106 1.8E-35 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM474_RS24620 47031e96edbbaade1e9ef20463674e52 282 SUPERFAMILY SSF55797 145 280 2.62E-22 T 29-03-2018 IPR014044 CAP domain AM474_RS24620 47031e96edbbaade1e9ef20463674e52 282 Gene3D G3DSA:3.40.33.10 16 89 0.17 T 29-03-2018 IPR014044 CAP domain AM474_RS24620 47031e96edbbaade1e9ef20463674e52 282 Pfam PF00188 Cysteine-rich secretory protein family 152 279 4.3E-20 T 29-03-2018 IPR014044 CAP domain AM474_RS24620 47031e96edbbaade1e9ef20463674e52 282 Gene3D G3DSA:3.40.33.10 143 280 8.1E-16 T 29-03-2018 IPR014044 CAP domain AM474_RS04660 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Pfam PF01513 ATP-NAD kinase 7 271 1.1E-68 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM474_RS04660 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Hamap MF_00361 NAD kinase [nadK]. 5 287 34.006 T 29-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM474_RS04660 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 SUPERFAMILY SSF111331 6 289 9.94E-90 T 29-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain AM474_RS04660 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Gene3D G3DSA:3.40.50.10330 1 140 1.2E-37 T 29-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 AM474_RS04660 7b6218b90f5ea0790dbd8e5a2cb3f0e4 295 Gene3D G3DSA:2.60.200.30 141 264 6.0E-41 T 29-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM474_RS22260 9c1f62b84cc0207af8c48e97465f55dc 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 6.6E-40 T 29-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair AM474_RS22260 9c1f62b84cc0207af8c48e97465f55dc 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.328 T 29-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair AM474_RS05255 5c56ffaa6b88100368b405a0d30e7659 195 Pfam PF04279 Intracellular septation protein A 1 185 1.8E-60 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM474_RS05255 5c56ffaa6b88100368b405a0d30e7659 195 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 187 17.597 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM474_RS05255 5c56ffaa6b88100368b405a0d30e7659 195 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 186 2.2E-52 T 29-03-2018 IPR006008 Intracellular septation protein A GO:0016021 AM474_RS04620 f1789a504053a3e88cd6b5186fae97de 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 5.1E-162 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS04620 f1789a504053a3e88cd6b5186fae97de 455 Gene3D G3DSA:2.50.20.10 160 451 8.6E-58 T 29-03-2018 AM474_RS07365 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF500060 12 532 2.4E-239 T 29-03-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AM474_RS07365 e79b82bb1766551c7e3b60fffabcd88d 536 Gene3D G3DSA:3.20.20.70 93 503 5.3E-98 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS07365 e79b82bb1766551c7e3b60fffabcd88d 536 SUPERFAMILY SSF51395 6 502 8.37E-139 T 29-03-2018 AM474_RS07365 e79b82bb1766551c7e3b60fffabcd88d 536 Pfam PF01645 Conserved region in glutamate synthase 158 475 1.6E-81 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM474_RS07365 e79b82bb1766551c7e3b60fffabcd88d 536 PIRSF PIRSF006429 8 535 3.4E-164 T 29-03-2018 IPR024188 Glutamate synthase large subunit-like protein AM474_RS11990 b730e697b99ff59abac4596735c45116 169 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 6.6E-34 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM474_RS11990 b730e697b99ff59abac4596735c45116 169 Gene3D G3DSA:1.20.1550.10 1 167 1.3E-35 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM474_RS11990 b730e697b99ff59abac4596735c45116 169 SUPERFAMILY SSF158442 13 159 1.05E-32 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM474_RS11990 b730e697b99ff59abac4596735c45116 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 168 18.348 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB AM474_RS00345 73ce2d8c904485b6e5868e0c6afac147 191 Gene3D G3DSA:3.10.450.50 5 191 1.6E-30 T 29-03-2018 AM474_RS00345 73ce2d8c904485b6e5868e0c6afac147 191 SUPERFAMILY SSF54427 11 191 1.88E-43 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS00345 73ce2d8c904485b6e5868e0c6afac147 191 Pfam PF00866 Ring hydroxylating beta subunit 39 182 1.2E-39 T 29-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 PIRSF PIRSF002181 1 142 2.8E-53 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 29-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 SUPERFAMILY SSF52161 1 139 2.49E-61 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.956 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 2.9E-66 T 29-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 Gene3D G3DSA:3.90.1180.10 1 142 1.0E-64 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM474_RS21220 53b6835ec36fc2082341824ff5d05432 142 Pfam PF00572 Ribosomal protein L13 15 138 8.2E-59 T 29-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 Gene3D G3DSA:3.10.129.10 40 166 7.5E-22 T 29-03-2018 AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 PRINTS PR01483 Fatty acid synthase signature 181 203 6.8E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 PRINTS PR01483 Fatty acid synthase signature 203 224 6.8E-5 T 29-03-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 Gene3D G3DSA:3.10.129.10 167 272 8.9E-18 T 29-03-2018 AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 SUPERFAMILY SSF54637 43 153 4.85E-6 T 29-03-2018 IPR029069 HotDog domain AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 SUPERFAMILY SSF54637 174 260 2.01E-18 T 29-03-2018 IPR029069 HotDog domain AM474_RS19285 9c8902f60f20c161ef48ec009f465fae 285 Pfam PF01575 MaoC like domain 180 254 1.8E-12 T 29-03-2018 IPR002539 MaoC-like domain AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 Gene3D G3DSA:3.40.50.10860 1 110 5.7E-37 T 29-03-2018 AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 87 5.1E-24 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 Gene3D G3DSA:3.40.50.720 111 274 7.5E-28 T 29-03-2018 AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 165 4.0E-7 T 29-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 SUPERFAMILY SSF51735 101 270 1.21E-36 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 271 5.8E-76 T 29-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 SUPERFAMILY SSF53223 1 100 1.09E-30 T 29-03-2018 AM474_RS14735 1e507efbc130cba71613f16c11e8074b 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 31.372 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM474_RS18710 118ae9eb71e87cf21e02a8d911651f56 417 Gene3D G3DSA:2.40.160.10 1 416 1.1E-113 T 29-03-2018 AM474_RS18710 118ae9eb71e87cf21e02a8d911651f56 417 Pfam PF03573 outer membrane porin, OprD family 31 416 8.3E-149 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS11615 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Gene3D G3DSA:3.40.190.10 25 138 4.7E-6 T 29-03-2018 AM474_RS11615 b0e42e9ec29f0151a7ef2d2153b28b9f 344 SUPERFAMILY SSF53850 25 341 7.76E-65 T 29-03-2018 AM474_RS11615 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Gene3D G3DSA:3.40.190.10 139 297 3.0E-28 T 29-03-2018 AM474_RS11615 b0e42e9ec29f0151a7ef2d2153b28b9f 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 308 3.6E-43 T 29-03-2018 AM474_RS15450 f3e4ed4e8cce02ff4386ad2a7da049fb 105 Pfam PF09498 Protein of unknown function (DUF2388) 37 104 5.0E-32 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS15450 f3e4ed4e8cce02ff4386ad2a7da049fb 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 104 2.5E-42 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS17755 5fd901f1d1d46b9ca1cb2c02b0481c1f 151 Gene3D G3DSA:3.30.2000.10 8 147 9.7E-35 T 29-03-2018 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 8.5E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.5E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.5E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 8.5E-23 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 SMART SM00304 267 317 72.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 SMART SM00304 212 264 2.0E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 SMART SM00283 279 540 1.1E-77 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 Gene3D G3DSA:1.10.287.950 304 541 6.7E-53 T 29-03-2018 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 Gene3D G3DSA:1.20.120.30 23 186 1.1E-16 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 12 184 4.3E-21 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 507 1.0E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS25310 e5c0547dd90ce54e9db194dfd11787ec 541 SUPERFAMILY SSF58104 232 540 6.93E-74 T 29-03-2018 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00448 1 112 7.1E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF52172 1 118 3.42E-36 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 3.7E-22 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:1.10.10.10 123 221 4.5E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 SUPERFAMILY SSF46894 123 217 2.83E-25 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 Gene3D G3DSA:3.40.50.2300 1 122 3.1E-31 T 29-03-2018 AM474_RS01130 10abdb2737a7e3547d6dbebb73c00631 223 SMART SM00862 146 217 2.9E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS05385 633e16b0ad7c624cb1578f1648e687b9 128 Gene3D G3DSA:2.40.50.100 1 126 1.0E-33 T 29-03-2018 AM474_RS05385 633e16b0ad7c624cb1578f1648e687b9 128 Pfam PF01597 Glycine cleavage H-protein 2 124 8.5E-28 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM474_RS05385 633e16b0ad7c624cb1578f1648e687b9 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS05385 633e16b0ad7c624cb1578f1648e687b9 128 SUPERFAMILY SSF51230 2 124 3.01E-31 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS20055 114cbaf54a19599149a4d996e4dea099 262 Gene3D G3DSA:2.60.40.10 169 254 2.6E-6 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS20055 114cbaf54a19599149a4d996e4dea099 262 SUPERFAMILY SSF49354 32 161 2.28E-26 T 29-03-2018 IPR008962 PapD-like AM474_RS20055 114cbaf54a19599149a4d996e4dea099 262 Gene3D G3DSA:2.60.40.10 31 158 6.3E-24 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS20055 114cbaf54a19599149a4d996e4dea099 262 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 41 156 8.4E-18 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS02570 7651172b1f488106e809217deb6d2657 626 Pfam PF00145 C-5 cytosine-specific DNA methylase 197 253 1.4E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 Pfam PF00145 C-5 cytosine-specific DNA methylase 28 144 1.1E-9 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 Pfam PF00145 C-5 cytosine-specific DNA methylase 551 612 8.9E-7 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 Gene3D G3DSA:3.90.120.10 362 602 7.3E-10 T 29-03-2018 AM474_RS02570 7651172b1f488106e809217deb6d2657 626 SUPERFAMILY SSF53335 201 286 1.27E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 SUPERFAMILY SSF53335 25 146 1.27E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 SUPERFAMILY SSF53335 515 612 1.27E-56 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02570 7651172b1f488106e809217deb6d2657 626 Gene3D G3DSA:3.40.50.150 27 261 2.4E-41 T 29-03-2018 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF47757 5 71 4.71E-15 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:1.10.155.10 1 70 1.4E-12 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 SUPERFAMILY SSF53335 72 265 3.92E-48 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 SMART SM00138 5 271 4.5E-95 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 230 253 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 65 77 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PRINTS PR00996 Glutamate methyltransferase family signature 211 225 1.2E-43 T 29-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 268 1.6E-67 T 29-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 PIRSF PIRSF000410 1 274 1.7E-75 T 29-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 Gene3D G3DSA:3.40.50.150 71 273 5.0E-45 T 29-03-2018 AM474_RS06080 0b10ba61fddaca5c0f11b388045f8bc8 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 6 56 2.5E-13 T 29-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 SUPERFAMILY SSF50475 7 314 2.0E-87 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 Gene3D G3DSA:3.40.1670.10 315 470 1.5E-29 T 29-03-2018 AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 8 455 4.9E-90 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 13 429 3.4E-115 T 29-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 Hamap MF_01983 UbiD-like decarboxylase. 4 493 51.335 T 29-03-2018 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 AM474_RS13515 dc5501a1c00d5fd519989cb086de00c3 496 SUPERFAMILY SSF143968 317 493 1.96E-31 T 29-03-2018 AM474_RS26670 efa1eeb0df0f315d9612d5c124f2d66e 569 Gene3D G3DSA:3.40.50.1820 43 553 2.7E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS26670 efa1eeb0df0f315d9612d5c124f2d66e 569 SUPERFAMILY SSF53474 50 62 8.77E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS26670 efa1eeb0df0f315d9612d5c124f2d66e 569 SUPERFAMILY SSF53474 190 340 8.77E-9 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS08865 b5a38b850b5ebfcb586fc5ade6f9a789 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 135 3.0E-38 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM474_RS08865 b5a38b850b5ebfcb586fc5ade6f9a789 142 Gene3D G3DSA:3.40.50.10110 1 140 1.1E-44 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM474_RS08865 b5a38b850b5ebfcb586fc5ade6f9a789 142 SUPERFAMILY SSF102400 2 139 1.57E-42 T 29-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AM474_RS05260 299cb11e9fbae1bb6567a876267edb2a 99 Gene3D G3DSA:3.30.70.1060 1 98 1.8E-26 T 29-03-2018 AM474_RS05260 299cb11e9fbae1bb6567a876267edb2a 99 SUPERFAMILY SSF54909 1 97 2.15E-30 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS05260 299cb11e9fbae1bb6567a876267edb2a 99 Pfam PF03795 YCII-related domain 1 95 5.3E-30 T 29-03-2018 IPR005545 YCII-related AM474_RS08080 d0acd50c847c629539deb0382609f287 252 PIRSF PIRSF000386 5 250 1.7E-97 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM474_RS08080 d0acd50c847c629539deb0382609f287 252 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 1.7E-64 T 29-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM474_RS08080 d0acd50c847c629539deb0382609f287 252 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 234 7.9E-98 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM474_RS08080 d0acd50c847c629539deb0382609f287 252 SUPERFAMILY SSF75217 5 249 3.4E-98 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS08080 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:1.10.1270.20 175 252 2.5E-33 T 29-03-2018 AM474_RS08080 d0acd50c847c629539deb0382609f287 252 Gene3D G3DSA:3.40.1280.10 4 174 7.2E-73 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS08080 d0acd50c847c629539deb0382609f287 252 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 252 114.841 T 29-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 Gene3D G3DSA:2.170.130.10 57 176 2.1E-13 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 82 723 0.0 T 29-03-2018 IPR010100 TonB-dependent copper receptor AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 Gene3D G3DSA:2.40.170.20 177 723 2.8E-64 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 Pfam PF00593 TonB dependent receptor 236 721 6.3E-50 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 181 3.0E-12 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS08650 60d5a4f6e8a5196afd4fedc594e3f08a 723 SUPERFAMILY SSF56935 71 723 1.08E-94 T 29-03-2018 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00989 PAS fold 635 718 7.1E-6 T 29-03-2018 IPR013767 PAS fold GO:0006355 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00388 756 822 1.1E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:1.10.287.130 750 818 4.1E-12 T 29-03-2018 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF00512 His Kinase A (phospho-acceptor) domain 757 819 2.0E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF47384 750 819 1.79E-10 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00091 632 700 3.2E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SMART SM00387 865 977 1.2E-36 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 633 748 6.0E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.450.20 619 749 1.5E-15 T 29-03-2018 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 865 975 1.4E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 Gene3D G3DSA:3.30.565.10 824 982 5.3E-38 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55874 817 978 2.23E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 SUPERFAMILY SSF55785 623 716 5.33E-9 T 29-03-2018 IPR000014 PAS domain AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 902 916 2.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 951 2.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 930 2.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS19630 107343bf24965050ef6936e13cf9cb3f 983 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 974 2.7E-15 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20110 27939688951642da19f21be931631dc3 507 SUPERFAMILY SSF51905 8 275 1.37E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20110 27939688951642da19f21be931631dc3 507 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 492 2.4E-266 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS20110 27939688951642da19f21be931631dc3 507 Gene3D G3DSA:3.50.50.60 1 444 1.8E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20110 27939688951642da19f21be931631dc3 507 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 5 494 54.162 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS20110 27939688951642da19f21be931631dc3 507 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 494 2.1E-232 T 29-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 AM474_RS13530 14d7232927cbd3ec65295de1256a16dd 213 SUPERFAMILY SSF103359 47 201 1.31E-5 T 29-03-2018 AM474_RS13530 14d7232927cbd3ec65295de1256a16dd 213 Pfam PF05076 Suppressor of fused protein (SUFU) 49 196 5.3E-21 T 29-03-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 AM474_RS08240 2dc6dcdedc7a89a3c963ca0149ab429e 234 Pfam PF04335 VirB8 protein 23 225 1.3E-70 T 29-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AM474_RS08240 2dc6dcdedc7a89a3c963ca0149ab429e 234 SUPERFAMILY SSF54427 93 226 2.54E-29 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS18310 06329611063ca10a9bc194d0b9bbcd48 627 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 593 56.332 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM474_RS18310 06329611063ca10a9bc194d0b9bbcd48 627 Pfam PF13667 ThiC-associated domain 22 99 6.9E-34 T 29-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM474_RS18310 06329611063ca10a9bc194d0b9bbcd48 627 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 591 3.2E-219 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM474_RS18310 06329611063ca10a9bc194d0b9bbcd48 627 Pfam PF01964 Radical SAM ThiC family 140 588 3.0E-200 T 29-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM474_RS01855 d1ed41b791bc711506f01ae69578f053 192 Pfam PF02342 TerD domain 1 187 1.2E-87 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS01855 d1ed41b791bc711506f01ae69578f053 192 Gene3D G3DSA:2.60.60.30 19 186 4.1E-69 T 29-03-2018 AM474_RS21535 5045e6441d95c22e832fd23442f4d576 364 SUPERFAMILY SSF50969 52 345 2.94E-21 T 29-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like AM474_RS21535 5045e6441d95c22e832fd23442f4d576 364 Pfam PF07433 Protein of unknown function (DUF1513) 60 363 8.3E-113 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AM474_RS21535 5045e6441d95c22e832fd23442f4d576 364 Gene3D G3DSA:2.130.10.10 263 362 0.005 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS21535 5045e6441d95c22e832fd23442f4d576 364 PIRSF PIRSF028101 1 364 8.0E-158 T 29-03-2018 IPR008311 Uncharacterised conserved protein UCP028101 AM474_RS21535 5045e6441d95c22e832fd23442f4d576 364 Gene3D G3DSA:2.130.10.10 20 262 3.6E-12 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS02550 24eb1f478685f3decc958c00587374b3 105 Pfam PF11112 Pyocin activator protein PrtN 21 94 1.3E-26 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS02550 24eb1f478685f3decc958c00587374b3 105 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 15 100 3.0E-28 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS05455 cac10ce19d6432782375cfe516d20439 103 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.8E-33 T 29-03-2018 IPR007436 Protein of unknown function DUF485 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 SUPERFAMILY SSF56655 9 268 7.33E-73 T 29-03-2018 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 Gene3D G3DSA:3.40.190.80 150 268 4.5E-30 T 29-03-2018 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 Pfam PF00459 Inositol monophosphatase family 10 244 9.9E-48 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 1.6E-10 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.6E-10 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.6E-10 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.6E-10 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 Gene3D G3DSA:3.30.540.10 7 149 6.3E-39 T 29-03-2018 AM474_RS16965 ba69ccf3d932b5a1456748ead564153d 273 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 9 254 1.8E-85 T 29-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 9.7E-157 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 Gene3D G3DSA:3.40.50.300 1 185 5.9E-21 T 29-03-2018 AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 510 1.5E-15 T 29-03-2018 IPR003395 RecF/RecN/SMC, N-terminal AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 SUPERFAMILY SSF52540 1 217 3.12E-64 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 Gene3D G3DSA:3.40.50.300 250 527 1.0E-20 T 29-03-2018 AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 PIRSF PIRSF003128 1 558 9.5E-160 T 29-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 SUPERFAMILY SSF52540 2 50 1.94E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS19415 fac32f43330c6852693f3f423d43af3c 558 SUPERFAMILY SSF52540 284 511 1.94E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04175 0964be54795451b3d72dc46b2757172a 342 PIRSF PIRSF006268 10 334 4.8E-84 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM474_RS04175 0964be54795451b3d72dc46b2757172a 342 Pfam PF02424 ApbE family 35 315 5.5E-81 T 29-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 AM474_RS04175 0964be54795451b3d72dc46b2757172a 342 Gene3D G3DSA:3.10.520.10 38 323 1.5E-54 T 29-03-2018 AM474_RS04175 0964be54795451b3d72dc46b2757172a 342 SUPERFAMILY SSF143631 29 334 2.01E-95 T 29-03-2018 IPR003374 ApbE-like domain AM474_RS29380 10e3e3a07d2e95e1cd2e86af4086f9aa 265 SUPERFAMILY SSF52096 3 263 1.16E-73 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS29380 10e3e3a07d2e95e1cd2e86af4086f9aa 265 Gene3D G3DSA:1.10.12.10 221 265 1.3E-12 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS29380 10e3e3a07d2e95e1cd2e86af4086f9aa 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS29380 10e3e3a07d2e95e1cd2e86af4086f9aa 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 263 1.1E-53 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS29380 10e3e3a07d2e95e1cd2e86af4086f9aa 265 Gene3D G3DSA:3.90.226.10 6 220 3.9E-54 T 29-03-2018 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 SUPERFAMILY SSF102645 184 400 5.49E-76 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 395 4.8E-140 T 29-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 Gene3D G3DSA:3.40.50.10300 184 402 7.6E-70 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 Gene3D G3DSA:3.40.50.1950 1 183 2.2E-54 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 Pfam PF02441 Flavoprotein 7 179 7.5E-42 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.3E-71 T 29-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM474_RS16210 40dcb692ec62f9e549e52831474a3178 402 SUPERFAMILY SSF52507 1 179 2.35E-59 T 29-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM474_RS08090 756997e9a62f76417b01b7017ff23a49 83 Gene3D G3DSA:3.30.1320.10 1 79 5.1E-32 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08090 756997e9a62f76417b01b7017ff23a49 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.793 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08090 756997e9a62f76417b01b7017ff23a49 83 Pfam PF00886 Ribosomal protein S16 8 68 2.4E-24 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08090 756997e9a62f76417b01b7017ff23a49 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 4.5E-28 T 29-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS08090 756997e9a62f76417b01b7017ff23a49 83 SUPERFAMILY SSF54565 1 78 2.22E-28 T 29-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.8E-64 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.2E-47 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.552 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 3.0E-157 T 29-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 Gene3D G3DSA:3.90.226.10 1 275 1.4E-65 T 29-03-2018 AM474_RS07555 d4e293f898d696d6f7b19c040ecdcd6d 316 SUPERFAMILY SSF52096 5 314 4.42E-104 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS17890 f82bf5941670a8c77a05e8870dc754d0 324 Gene3D G3DSA:1.20.58.60 104 237 0.0059 T 29-03-2018 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 Pfam PF05746 DALR anticodon binding domain 577 671 1.2E-6 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 683 25.41 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 2.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 2.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 2.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 389 408 2.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.6E-35 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 Gene3D G3DSA:1.10.730.10 571 677 5.2E-11 T 29-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 SUPERFAMILY SSF109604 334 485 2.04E-17 T 29-03-2018 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 545 1.5E-205 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 683 9.4E-245 T 29-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 SMART SM00836 580 683 0.0029 T 29-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM474_RS14820 26008e63dd97bd6dd77bfa384d36fe96 684 Gene3D G3DSA:1.10.3210.10 211 514 1.1E-6 T 29-03-2018 AM474_RS09650 2028684d968938967e2b3a3c98b680b1 73 SMART SM00530 11 66 5.0E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS09650 2028684d968938967e2b3a3c98b680b1 73 Gene3D G3DSA:1.10.260.40 1 68 4.9E-18 T 29-03-2018 AM474_RS09650 2028684d968938967e2b3a3c98b680b1 73 SUPERFAMILY SSF47413 4 67 4.5E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS09650 2028684d968938967e2b3a3c98b680b1 73 Pfam PF01381 Helix-turn-helix 12 64 8.0E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 7.9E-36 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 156 178 7.9E-36 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 331 344 7.9E-36 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 179 192 7.9E-36 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 PRINTS PR00419 Adrenodoxin reductase family signature 221 231 7.9E-36 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF51971 153 406 2.0E-70 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.40.50.720 398 476 4.6E-5 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.50.50.60 322 397 6.6E-18 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.50.50.60 246 321 4.9E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 SUPERFAMILY SSF46548 15 165 9.94E-39 T 29-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:1.10.1060.10 6 151 3.9E-38 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 32 142 6.5E-38 T 29-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Gene3D G3DSA:3.40.50.720 152 245 1.0E-16 T 29-03-2018 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 464 4.6E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17980 9dc9a8a68d4f1bf148ea0b06cf94b147 477 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 14 477 5.7E-238 T 29-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 AM474_RS16115 a9a48ce641746a8bdcf84bed6c2c4408 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 5.1E-43 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS16115 a9a48ce641746a8bdcf84bed6c2c4408 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 29-03-2018 IPR019897 RidA, conserved site AM474_RS16115 a9a48ce641746a8bdcf84bed6c2c4408 126 Gene3D G3DSA:3.30.1330.40 1 126 8.8E-48 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS16115 a9a48ce641746a8bdcf84bed6c2c4408 126 SUPERFAMILY SSF55298 1 125 3.93E-46 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS16115 a9a48ce641746a8bdcf84bed6c2c4408 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 2.3E-53 T 29-03-2018 IPR006056 RidA family AM474_RS15480 5fdf080f08d269c5ee999877a8eb9a6a 540 Pfam PF13692 Glycosyl transferases group 1 377 459 2.5E-8 T 29-03-2018 AM474_RS15480 5fdf080f08d269c5ee999877a8eb9a6a 540 Gene3D G3DSA:3.40.50.2000 301 503 2.3E-24 T 29-03-2018 AM474_RS15480 5fdf080f08d269c5ee999877a8eb9a6a 540 SUPERFAMILY SSF53756 304 480 1.1E-19 T 29-03-2018 AM474_RS18895 f0fbbcc84cab7bbd0756ab5d3bdf05d8 150 Pfam PF00583 Acetyltransferase (GNAT) family 38 129 1.2E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS18895 f0fbbcc84cab7bbd0756ab5d3bdf05d8 150 Gene3D G3DSA:3.40.630.30 1 78 3.0E-12 T 29-03-2018 AM474_RS18895 f0fbbcc84cab7bbd0756ab5d3bdf05d8 150 SUPERFAMILY SSF55729 1 149 8.27E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS18895 f0fbbcc84cab7bbd0756ab5d3bdf05d8 150 Gene3D G3DSA:3.40.630.30 79 146 4.9E-15 T 29-03-2018 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 Gene3D G3DSA:1.10.10.60 241 283 1.2E-8 T 29-03-2018 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 Gene3D G3DSA:1.10.10.60 284 339 1.4E-11 T 29-03-2018 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 SUPERFAMILY SSF52317 15 205 5.09E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 Gene3D G3DSA:3.40.50.880 11 240 2.4E-48 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 SUPERFAMILY SSF46689 224 274 2.15E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 Pfam PF01965 DJ-1/PfpI family 20 183 1.4E-17 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 Pfam PF12833 Helix-turn-helix domain 246 324 1.3E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 SMART SM00342 240 323 9.5E-29 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS15875 e1017d9d2a9ca32921966945d98ae174 367 SUPERFAMILY SSF46689 276 325 8.06E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS22575 9aa3fbc666f90cf45d673880747dbf90 101 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.0E-23 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS22575 9aa3fbc666f90cf45d673880747dbf90 101 SUPERFAMILY SSF103481 5 100 3.4E-19 T 29-03-2018 AM474_RS07435 2bb96e98e0374b69ec682586013fcc39 153 Pfam PF02631 RecX family 33 149 3.1E-32 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM474_RS07435 2bb96e98e0374b69ec682586013fcc39 153 Gene3D G3DSA:1.10.10.10 10 55 1.4E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07435 2bb96e98e0374b69ec682586013fcc39 153 Gene3D G3DSA:1.10.10.10 103 153 5.4E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07435 2bb96e98e0374b69ec682586013fcc39 153 Gene3D G3DSA:1.10.10.10 57 101 2.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07435 2bb96e98e0374b69ec682586013fcc39 153 Hamap MF_01114 Regulatory protein RecX [recX]. 2 153 13.885 T 29-03-2018 IPR003783 Regulatory protein RecX GO:0006282 AM474_RS03930 3e66e3d474deee7bee4b0ce53b8381a0 233 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 1 226 1.7E-95 T 29-03-2018 IPR012666 Cobalt transporter subunit CbtA, putative AM474_RS03930 3e66e3d474deee7bee4b0ce53b8381a0 233 Gene3D G3DSA:1.20.1250.20 135 229 0.016 T 29-03-2018 AM474_RS03930 3e66e3d474deee7bee4b0ce53b8381a0 233 Gene3D G3DSA:1.20.1250.20 5 134 0.0064 T 29-03-2018 AM474_RS03930 3e66e3d474deee7bee4b0ce53b8381a0 233 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 2 224 1.8E-67 T 29-03-2018 IPR012666 Cobalt transporter subunit CbtA, putative AM474_RS30120 8b5a467541562d3c2ea3cfe0bc8f97da 312 Pfam PF01904 Protein of unknown function DUF72 24 288 2.5E-67 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS30120 8b5a467541562d3c2ea3cfe0bc8f97da 312 SUPERFAMILY SSF117396 6 135 1.96E-79 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS30120 8b5a467541562d3c2ea3cfe0bc8f97da 312 SUPERFAMILY SSF117396 163 291 1.96E-79 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS30120 8b5a467541562d3c2ea3cfe0bc8f97da 312 Gene3D G3DSA:3.20.20.410 1 300 5.1E-91 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 40 582 2.8E-274 T 29-03-2018 IPR017534 GNAT-acetyltransferase AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 Pfam PF00583 Acetyltransferase (GNAT) family 158 248 6.3E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 SUPERFAMILY SSF55729 63 255 3.31E-26 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.40.630.30 108 263 1.9E-20 T 29-03-2018 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 Pfam PF08443 RimK-like ATP-grasp domain 332 434 2.4E-8 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.30.470.20 402 579 2.5E-24 T 29-03-2018 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 SUPERFAMILY SSF56059 500 578 1.25E-31 T 29-03-2018 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 SUPERFAMILY SSF56059 333 443 1.25E-31 T 29-03-2018 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 Gene3D G3DSA:3.30.1490.20 322 401 7.8E-15 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS06705 1732b9ba5bb62c601790d21af29fb71a 585 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 280 289 - T 29-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 Pfam PF00067 Cytochrome P450 267 368 1.0E-13 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 Gene3D G3DSA:1.10.630.10 15 400 4.2E-68 T 29-03-2018 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 347 358 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 137 153 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 289 316 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 91 102 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 338 347 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 190 212 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 271 282 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 154 169 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 PRINTS PR00359 B-class P450 signature 317 332 5.7E-51 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS05990 af8c31012163af9fb8a526e0b52a4e5a 418 SUPERFAMILY SSF48264 27 397 3.14E-91 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 3.9E-126 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.9E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.9E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.9E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.9E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.9E-35 T 29-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 354 7.8E-125 T 29-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 SUPERFAMILY SSF160544 245 352 8.89E-41 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS26365 e9eed82a3d7ba86e31884a27c9b320b9 378 Gene3D G3DSA:3.40.1690.10 219 354 1.4E-55 T 29-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal AM474_RS08775 1df965c74fe08cf678ff5c2716a1800a 163 SUPERFAMILY SSF46785 2 132 1.82E-36 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08775 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 4.5E-47 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM474_RS08775 1df965c74fe08cf678ff5c2716a1800a 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 5.7E-67 T 29-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 AM474_RS08775 1df965c74fe08cf678ff5c2716a1800a 163 Pfam PF02082 Transcriptional regulator 1 83 8.0E-28 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM474_RS08775 1df965c74fe08cf678ff5c2716a1800a 163 Gene3D G3DSA:1.10.10.10 1 141 1.7E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 1.5E-39 T 29-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF55347 128 237 1.79E-37 T 29-03-2018 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 Gene3D G3DSA:3.40.50.720 2 121 1.6E-27 T 29-03-2018 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 266 1.4E-100 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 PIRSF PIRSF000161 1 268 2.7E-88 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 266 36.014 T 29-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF51735 1 127 3.23E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 SUPERFAMILY SSF51735 237 267 3.23E-50 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 6.9E-44 T 29-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 Gene3D G3DSA:3.30.360.10 127 235 2.4E-36 T 29-03-2018 AM474_RS19440 f92f02fcc6aba2eb9c5ed8694addf071 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 29-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 SUPERFAMILY SSF48264 32 434 2.62E-73 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 182 197 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 310 321 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 377 386 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 327 354 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 119 130 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 165 181 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 386 397 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 PRINTS PR00359 B-class P450 signature 355 370 6.1E-38 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 Gene3D G3DSA:1.10.630.10 21 436 5.4E-62 T 29-03-2018 AM474_RS32020 82d7cb84079d84d850f7f3c31657ab22 444 Pfam PF00067 Cytochrome P450 309 406 5.1E-14 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.470.20 171 277 6.5E-34 T 29-03-2018 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 8.0E-87 T 29-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 9.9E-69 T 29-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.40.50.20 1 114 7.3E-37 T 29-03-2018 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 SUPERFAMILY SSF56059 98 288 9.43E-50 T 29-03-2018 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 Gene3D G3DSA:3.30.1490.20 115 170 1.4E-11 T 29-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AM474_RS16845 76b6eb5280add0950e381fc6160ab8df 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.391 T 29-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AM474_RS24175 610dbfdec07b8516229272e847cab2ab 365 SUPERFAMILY SSF53686 24 337 1.57E-67 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS24175 610dbfdec07b8516229272e847cab2ab 365 Gene3D G3DSA:3.40.50.1100 35 141 5.0E-24 T 29-03-2018 AM474_RS24175 610dbfdec07b8516229272e847cab2ab 365 Gene3D G3DSA:3.40.50.1100 142 330 9.3E-36 T 29-03-2018 AM474_RS24175 610dbfdec07b8516229272e847cab2ab 365 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 317 5.0E-43 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS10495 ae27e42a67db6db51a2ddbca37c0a94f 130 Gene3D G3DSA:3.30.429.10 1 126 2.2E-43 T 29-03-2018 AM474_RS10495 ae27e42a67db6db51a2ddbca37c0a94f 130 SUPERFAMILY SSF55331 2 125 2.43E-43 T 29-03-2018 IPR014347 Tautomerase/MIF superfamily AM474_RS10495 ae27e42a67db6db51a2ddbca37c0a94f 130 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 122 1.9E-25 T 29-03-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 AM474_RS11720 2e1fcd53e49088747aaa1ccf741ea3ab 189 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 181 3.8E-53 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM474_RS11720 2e1fcd53e49088747aaa1ccf741ea3ab 189 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 189 18.694 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM474_RS11720 2e1fcd53e49088747aaa1ccf741ea3ab 189 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 187 4.5E-54 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM474_RS11720 2e1fcd53e49088747aaa1ccf741ea3ab 189 SMART SM01207 7 182 2.0E-81 T 29-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:3.30.190.20 127 249 2.4E-44 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:1.10.8.280 286 405 1.7E-33 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 SUPERFAMILY SSF52540 612 910 1.22E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:3.40.50.300 9 35 0.0048 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:3.40.50.300 411 617 2.0E-23 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 SUPERFAMILY SSF52540 7 204 4.28E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 SUPERFAMILY SSF52540 454 569 4.28E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:3.40.50.300 618 942 4.0E-56 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Gene3D G3DSA:3.40.50.300 36 115 2.3E-4 T 29-03-2018 AM474_RS11025 0423635a629e42b14de8d8bf0441d40c 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.85 T 29-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AM474_RS28535 fd60b28a9dfa77b868f24e32cba3ddb4 80 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 4.8E-29 T 29-03-2018 IPR010696 Protein of unknown function DUF1272 AM474_RS29400 2c0ea2fae519e7dd46bca4482cb70146 309 SUPERFAMILY SSF50956 11 304 2.75E-46 T 29-03-2018 AM474_RS29400 2c0ea2fae519e7dd46bca4482cb70146 309 Gene3D G3DSA:2.120.10.30 47 304 1.6E-9 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS29400 2c0ea2fae519e7dd46bca4482cb70146 309 Pfam PF06977 SdiA-regulated 51 302 8.6E-96 T 29-03-2018 IPR009722 SdiA-regulated AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 SMART SM00382 30 231 2.0E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 SUPERFAMILY SSF52540 4 253 2.24E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF00005 ABC transporter 22 181 5.4E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.9E-10 T 29-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AM474_RS24225 c9fd75a3d4673a2c884c3a9599a111c6 255 Gene3D G3DSA:3.40.50.300 1 255 1.2E-57 T 29-03-2018 AM474_RS07055 56bcb71fd8fe9b0047e7fdff6530add8 474 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 64 325 2.1E-84 T 29-03-2018 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain AM474_RS07055 56bcb71fd8fe9b0047e7fdff6530add8 474 Gene3D G3DSA:3.40.50.1110 46 196 7.6E-7 T 29-03-2018 AM474_RS07055 56bcb71fd8fe9b0047e7fdff6530add8 474 Gene3D G3DSA:3.40.50.1110 232 404 0.11 T 29-03-2018 AM474_RS07055 56bcb71fd8fe9b0047e7fdff6530add8 474 Pfam PF16824 C-terminal carbohydrate-binding module 346 465 2.2E-57 T 29-03-2018 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 56 252 3.3E-88 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 Pfam PF00813 FliP family 56 248 3.6E-79 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 93 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 112 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 2.1E-66 T 29-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 52 61 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 138 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 124 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS26350 b8a9e68b9048143ed814069d943db17f 255 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 4.3E-24 T 29-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 Gene3D G3DSA:4.10.520.10 2 100 1.0E-32 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.6E-31 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 1.3E-54 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.539 T 29-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 SUPERFAMILY SSF47729 4 93 2.94E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.6E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.6E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.6E-17 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS01610 c17c62d0467f3ba379d4298e2891e80d 100 SMART SM00411 4 93 2.0E-41 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 Gene3D G3DSA:3.40.50.200 209 586 1.6E-35 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 Pfam PF00082 Subtilase family 258 535 3.6E-21 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 497 507 - T 29-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 PIRSF PIRSF029389 1 590 0.0 T 29-03-2018 IPR016916 Uncharacterised conserved protein UCP029389, subtilisin-related AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 295 308 1.5E-6 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 253 272 1.5E-6 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 PRINTS PR00723 Subtilisin serine protease family (S8) signature 496 512 1.5E-6 T 29-03-2018 IPR015500 Peptidase S8, subtilisin-related AM474_RS25210 681b82e2e74e967d2c6ed16593e90660 590 SUPERFAMILY SSF52743 242 539 3.14E-36 T 29-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AM474_RS06925 3609310dd6bca434afd108c2233c23fe 64 Pfam PF00403 Heavy-metal-associated domain 4 60 3.5E-9 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS06925 3609310dd6bca434afd108c2233c23fe 64 Gene3D G3DSA:3.30.70.100 1 61 9.8E-13 T 29-03-2018 AM474_RS06925 3609310dd6bca434afd108c2233c23fe 64 SUPERFAMILY SSF55008 2 61 1.57E-13 T 29-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AM474_RS07060 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Hamap MF_00557 Alginate lyase [algL]. 5 367 55.74 T 29-03-2018 IPR022859 Alginate lyase GO:0042122|GO:0042597|GO:0045135 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AM474_RS07060 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Gene3D G3DSA:1.50.10.100 42 364 2.1E-51 T 29-03-2018 AM474_RS07060 3c5fa5e7faad31e0fcfb4e9208878ee2 367 Pfam PF05426 Alginate lyase 63 303 7.2E-59 T 29-03-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 AM474_RS07060 3c5fa5e7faad31e0fcfb4e9208878ee2 367 SUPERFAMILY SSF48230 30 361 1.46E-62 T 29-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 215 1.3E-31 T 29-03-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 3 222 3.84E-76 T 29-03-2018 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 SUPERFAMILY SSF100950 225 494 2.76E-85 T 29-03-2018 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.1080.10 13 239 3.9E-36 T 29-03-2018 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 Gene3D G3DSA:3.40.1080.10 240 496 4.9E-60 T 29-03-2018 AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 463 2.5E-40 T 29-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AM474_RS15530 bad715f9e391bc6365745ba9f254e358 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 13 494 9.5E-231 T 29-03-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.465.10 53 123 1.6E-15 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.465.10 138 218 7.9E-17 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.390.50 219 325 4.4E-25 T 29-03-2018 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 225 322 1.3E-14 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 SUPERFAMILY SSF55447 223 322 1.96E-27 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 SUPERFAMILY SSF56176 1 217 8.72E-59 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 SMART SM01092 224 322 8.2E-28 T 29-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Gene3D G3DSA:3.30.43.10 1 49 5.0E-19 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS28975 b1d48bc644e33ccfabcb4fdacd372fe3 329 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 217 4.9E-50 T 29-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 AM474_RS14690 1d0db0760aea54d3d05f1a3a9deb1e49 121 Pfam PF01627 Hpt domain 24 99 4.2E-9 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS14690 1d0db0760aea54d3d05f1a3a9deb1e49 121 SUPERFAMILY SSF47226 9 111 1.19E-15 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS14690 1d0db0760aea54d3d05f1a3a9deb1e49 121 Gene3D G3DSA:1.20.120.160 1 111 8.4E-14 T 29-03-2018 AM474_RS23455 01b9c7502b996503e0a6b57c41545812 234 Gene3D G3DSA:1.10.8.60 168 233 6.8E-13 T 29-03-2018 AM474_RS23455 01b9c7502b996503e0a6b57c41545812 234 Gene3D G3DSA:3.40.50.300 43 165 1.5E-11 T 29-03-2018 AM474_RS23455 01b9c7502b996503e0a6b57c41545812 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 232 9.4E-90 T 29-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 AM474_RS23455 01b9c7502b996503e0a6b57c41545812 234 SUPERFAMILY SSF52540 14 213 9.68E-26 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS23455 01b9c7502b996503e0a6b57c41545812 234 Pfam PF00308 Bacterial dnaA protein 14 212 8.7E-20 T 29-03-2018 IPR013317 Chromosomal replication initiator protein DnaA AM474_RS01205 c529a3d8a7e115857045960752fc9463 359 Pfam PF03934 Type II secretion system (T2SS), protein K 138 275 1.2E-6 T 29-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 AM474_RS01205 c529a3d8a7e115857045960752fc9463 359 Gene3D G3DSA:1.10.40.60 124 295 0.003 T 29-03-2018 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 Pfam PF01070 FMN-dependent dehydrogenase 13 375 5.7E-125 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 75.009 T 29-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 PIRSF PIRSF000138 2 379 9.4E-122 T 29-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 Gene3D G3DSA:3.20.20.70 2 379 4.8E-97 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 29-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 SUPERFAMILY SSF51395 223 374 1.16E-98 T 29-03-2018 AM474_RS19375 d45689c6b582c09144bf3ce7f881ddf8 381 SUPERFAMILY SSF51395 7 193 1.16E-98 T 29-03-2018 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 SUPERFAMILY SSF58104 88 336 4.58E-37 T 29-03-2018 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 195 222 1.4E-16 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 224 253 1.4E-16 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 SMART SM00283 95 344 3.5E-5 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 316 3.9E-28 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS13870 84e69c58245b7a3d14852006477faf4c 390 Gene3D G3DSA:1.10.287.950 107 332 6.8E-33 T 29-03-2018 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 SUPERFAMILY SSF48208 49 542 2.17E-160 T 29-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 ProSitePatterns PS00928 Trehalase signature 2. 453 462 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 199 217 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 274 291 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 523 536 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 446 462 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 340 357 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 PRINTS PR00744 Glycosyl hydrolase family 37 signature 308 325 6.2E-41 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 Hamap MF_01060 Periplasmic trehalase [treA]. 2 541 85.762 T 29-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 Gene3D G3DSA:1.50.10.10 48 544 3.5E-151 T 29-03-2018 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 ProSitePatterns PS00927 Trehalase signature 1. 157 170 - T 29-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS31670 904b19e5c97a3e14777af20e2d4dbc03 545 Pfam PF01204 Trehalase 64 540 4.5E-171 T 29-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 29-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 SUPERFAMILY SSF52833 3 179 3.42E-55 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.1E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.1E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.1E-18 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 PIRSF PIRSF000303 1 182 5.8E-59 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 Gene3D G3DSA:3.40.30.10 3 181 1.2E-44 T 29-03-2018 AM474_RS00540 ad2e34dbc7b4ae78f167ec516c22aef6 184 Pfam PF00255 Glutathione peroxidase 5 111 2.4E-37 T 29-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 2.6E-50 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.844 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.3E-16 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00382 112 333 2.5E-10 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:3.40.50.300 57 315 3.0E-71 T 29-03-2018 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.9E-20 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 412 2.3E-207 T 29-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF57716 14 49 1.14E-11 T 29-03-2018 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 Gene3D G3DSA:1.10.8.60 317 408 2.7E-34 T 29-03-2018 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM00994 13 52 2.5E-24 T 29-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 SMART SM01086 317 412 8.9E-35 T 29-03-2018 IPR019489 Clp ATPase, C-terminal AM474_RS28285 8f7bec34ebbfb44721683e2d983a6e3b 426 SUPERFAMILY SSF52540 65 403 3.57E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 Pfam PF07690 Major Facilitator Superfamily 21 232 5.1E-22 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 PRINTS PR01035 Tetracycline resistance protein signature 344 367 1.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 PRINTS PR01035 Tetracycline resistance protein signature 258 278 1.8E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 SUPERFAMILY SSF103473 13 388 1.02E-47 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 Gene3D G3DSA:1.20.1250.20 211 402 5.2E-20 T 29-03-2018 AM474_RS28840 3c6b490c52542cba6fac0987190ea50d 403 Gene3D G3DSA:1.20.1250.20 12 210 8.0E-26 T 29-03-2018 AM474_RS05430 f8d3b9e942d3dd1cf945539589a0eccb 374 SUPERFAMILY SSF55729 174 344 2.28E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS05430 f8d3b9e942d3dd1cf945539589a0eccb 374 Gene3D G3DSA:3.40.630.30 185 354 2.9E-32 T 29-03-2018 AM474_RS05430 f8d3b9e942d3dd1cf945539589a0eccb 374 Gene3D G3DSA:3.40.630.30 7 184 7.4E-11 T 29-03-2018 AM474_RS05430 f8d3b9e942d3dd1cf945539589a0eccb 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 373 5.4E-148 T 29-03-2018 IPR007434 Peptidogalycan biosysnthesis/recognition AM474_RS23175 d4b2485a238fd87251e652b370711864 448 Pfam PF04996 Succinylarginine dihydrolase 3 446 3.3E-225 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM474_RS23175 d4b2485a238fd87251e652b370711864 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 60.684 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM474_RS23175 d4b2485a238fd87251e652b370711864 448 Gene3D G3DSA:3.75.10.20 2 447 3.9E-223 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM474_RS23175 d4b2485a238fd87251e652b370711864 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 446 4.4E-248 T 29-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AM474_RS23175 d4b2485a238fd87251e652b370711864 448 SUPERFAMILY SSF55909 3 446 6.38E-207 T 29-03-2018 AM474_RS07855 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 SUPERFAMILY SSF46689 32 103 1.44E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07855 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Gene3D G3DSA:1.10.357.10 35 237 4.0E-35 T 29-03-2018 AM474_RS07855 bb19245ca51bb7f53ccbd3a9a6fc0d3f 237 Pfam PF00440 Bacterial regulatory proteins, tetR family 40 83 2.0E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS25850 a588023587792d016392dc52d349f530 126 SUPERFAMILY SSF54285 41 126 5.42E-15 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM474_RS25850 a588023587792d016392dc52d349f530 126 Pfam PF02597 ThiS family 59 126 1.2E-6 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM474_RS25850 a588023587792d016392dc52d349f530 126 Gene3D G3DSA:3.10.20.30 45 126 6.2E-9 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS10185 1130035266fc3788adae54e305ec66fa 200 Pfam PF10986 Protein of unknown function (DUF2796) 31 195 8.6E-57 T 29-03-2018 IPR021253 Protein of unknown function DUF2796 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 Gene3D G3DSA:3.40.50.720 412 573 3.2E-15 T 29-03-2018 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 Pfam PF00999 Sodium/hydrogen exchanger family 24 388 1.8E-70 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 28 299 5.7E-79 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 Gene3D G3DSA:1.20.91.10 243 327 7.3E-11 T 29-03-2018 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 Pfam PF02254 TrkA-N domain 416 526 2.0E-19 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS23685 40e0d9734c66e924a45428eea58537e3 591 SUPERFAMILY SSF51735 416 544 9.87E-29 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 437 6.7E-104 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF01938 TRAM domain 377 440 1.5E-5 T 29-03-2018 IPR002792 TRAM domain AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 436 2.0E-178 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 143 163 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 439 61.878 T 29-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF00919 Uncharacterized protein family UPF0004 7 98 9.4E-21 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:3.80.30.20 136 379 1.1E-44 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Pfam PF04055 Radical SAM superfamily 145 322 7.6E-27 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 Gene3D G3DSA:2.40.50.140 380 440 3.2E-25 T 29-03-2018 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 SUPERFAMILY SSF102114 109 370 3.53E-53 T 29-03-2018 AM474_RS23275 95434972f74fc1c699aff7f0a4c35f89 440 SMART SM00729 139 365 2.6E-51 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS06135 4355eb2c9b6a2134c7377901b4a7b5a4 336 Pfam PF11168 Protein of unknown function (DUF2955) 8 147 4.2E-48 T 29-03-2018 IPR022604 Protein of unknown function DUF2955 AM474_RS06135 4355eb2c9b6a2134c7377901b4a7b5a4 336 PIRSF PIRSF029594 1 336 2.5E-177 T 29-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 AM474_RS06135 4355eb2c9b6a2134c7377901b4a7b5a4 336 Pfam PF13515 Fusaric acid resistance protein-like 184 316 1.4E-9 T 29-03-2018 AM474_RS09320 5b6267eb0e023d157e67737999c14635 160 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 149 6.4E-70 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM474_RS09320 5b6267eb0e023d157e67737999c14635 160 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 155 35.449 T 29-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 AM474_RS09320 5b6267eb0e023d157e67737999c14635 160 Pfam PF01967 MoaC family 13 147 7.6E-56 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM474_RS09320 5b6267eb0e023d157e67737999c14635 160 Gene3D G3DSA:3.30.70.640 1 155 1.9E-68 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM474_RS09320 5b6267eb0e023d157e67737999c14635 160 SUPERFAMILY SSF55040 9 152 3.79E-60 T 29-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 Gene3D G3DSA:3.30.70.1560 90 171 3.5E-28 T 29-03-2018 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 46 60 - T 29-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 Gene3D G3DSA:3.30.70.580 6 89 4.1E-18 T 29-03-2018 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 15 184 3.5E-59 T 29-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 SUPERFAMILY SSF55120 10 187 3.68E-44 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS09710 d009137e589817def62b20f6d52ba058 189 Pfam PF00849 RNA pseudouridylate synthase 11 155 2.0E-16 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS03195 3fe83557a15ad56b4588fc18524951ed 202 SUPERFAMILY SSF55729 19 169 7.65E-11 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS03195 3fe83557a15ad56b4588fc18524951ed 202 Gene3D G3DSA:3.40.630.30 14 198 1.1E-12 T 29-03-2018 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 Pfam PF00561 alpha/beta hydrolase fold 28 278 1.2E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 PRINTS PR00412 Epoxide hydrolase signature 236 252 1.7E-16 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.7E-16 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.7E-16 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 PRINTS PR00412 Epoxide hydrolase signature 99 112 1.7E-16 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 PRINTS PR00412 Epoxide hydrolase signature 270 292 1.7E-16 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 Gene3D G3DSA:3.40.50.1820 3 296 3.9E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS09840 18627b946ced0b358f2f78d467c347e9 296 SUPERFAMILY SSF53474 5 294 5.25E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 ProSitePatterns PS01068 OmpA-like domain. 178 222 - T 29-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 PRINTS PR01021 OMPA domain signature 146 168 1.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 PRINTS PR01021 OMPA domain signature 176 191 1.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 PRINTS PR01021 OMPA domain signature 191 207 1.3E-16 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 SUPERFAMILY SSF103088 137 246 2.62E-39 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 Gene3D G3DSA:3.30.1330.60 89 257 1.9E-45 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 Pfam PF00691 OmpA family 145 240 1.1E-24 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS07820 6d9f15a7db9c0491621703a1742888c6 262 Pfam PF14346 Domain of unknown function (DUF4398) 14 113 2.4E-14 T 29-03-2018 IPR025511 Domain of unknown function DUF4398 AM474_RS26085 f0569a27aa717a8cbd18613e5dc57694 252 SUPERFAMILY SSF81301 41 118 6.54E-11 T 29-03-2018 AM474_RS26085 f0569a27aa717a8cbd18613e5dc57694 252 Pfam PF01909 Nucleotidyltransferase domain 42 78 7.4E-5 T 29-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AM474_RS26085 f0569a27aa717a8cbd18613e5dc57694 252 Gene3D G3DSA:3.30.460.10 12 135 4.4E-15 T 29-03-2018 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 30 52 6.5E-6 T 29-03-2018 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 162 177 6.5E-6 T 29-03-2018 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 Pfam PF01266 FAD dependent oxidoreductase 30 384 4.7E-38 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 SUPERFAMILY SSF51905 346 400 3.88E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 SUPERFAMILY SSF51905 29 254 3.88E-38 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31195 af0e56257f919b8b1c710d64d7a0ca65 432 Gene3D G3DSA:3.50.50.60 19 405 3.2E-33 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS29465 c8daf8a5072e01d31281555e6609db4d 99 PIRSF PIRSF037266 1 97 4.2E-45 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AM474_RS29465 c8daf8a5072e01d31281555e6609db4d 99 Gene3D G3DSA:1.10.10.10 4 99 1.4E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29465 c8daf8a5072e01d31281555e6609db4d 99 Pfam PF09904 Winged helix-turn helix 5 94 1.3E-39 T 29-03-2018 IPR017162 Uncharacterised conserved protein UCP037266 AM474_RS29465 c8daf8a5072e01d31281555e6609db4d 99 SUPERFAMILY SSF46785 9 91 2.87E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:1.10.10.10 2 87 1.2E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:3.40.190.10 90 180 3.4E-16 T 29-03-2018 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 Gene3D G3DSA:3.40.190.10 181 271 1.3E-18 T 29-03-2018 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.2E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 Pfam PF03466 LysR substrate binding domain 91 298 4.5E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF46785 4 109 7.57E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08585 fdbf1628a0c2432a839b7a181f7baed6 311 SUPERFAMILY SSF53850 93 299 3.74E-33 T 29-03-2018 AM474_RS31390 ab5e2bcff16982c9cf1f4aa7a83c9dd5 366 Pfam PF06812 ImpA, N-terminal, type VI secretion system 16 138 1.4E-37 T 29-03-2018 IPR010657 ImpA, N-terminal AM474_RS31390 ab5e2bcff16982c9cf1f4aa7a83c9dd5 366 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 11 363 1.1E-125 T 29-03-2018 IPR017740 Type VI secretion system-associated, ImpA AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 Gene3D G3DSA:3.40.50.720 1 285 3.3E-86 T 29-03-2018 AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 SUPERFAMILY SSF51735 41 284 2.69E-87 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 4.2E-67 T 29-03-2018 AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 43 228 0.0072 T 29-03-2018 AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 1.6E-42 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 9.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 9.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 9.7E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30035 ed2ce9434d15b4bb865e4f4eddec3a22 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS19400 41b6860ed1308437bb23762410af98b9 101 Pfam PF03658 RnfH family Ubiquitin 4 88 1.2E-30 T 29-03-2018 IPR005346 RnfH protein AM474_RS19400 41b6860ed1308437bb23762410af98b9 101 Gene3D G3DSA:3.10.20.280 1 89 1.2E-30 T 29-03-2018 IPR005346 RnfH protein AM474_RS19400 41b6860ed1308437bb23762410af98b9 101 Hamap MF_00460 Protein RnfH [rnfH]. 4 96 24.947 T 29-03-2018 IPR005346 RnfH protein AM474_RS19400 41b6860ed1308437bb23762410af98b9 101 SUPERFAMILY SSF54285 4 80 1.26E-21 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM474_RS06610 8503bda85ec0c561d67aab745211db6e 274 Gene3D G3DSA:3.40.50.300 20 227 1.7E-57 T 29-03-2018 AM474_RS06610 8503bda85ec0c561d67aab745211db6e 274 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06610 8503bda85ec0c561d67aab745211db6e 274 Pfam PF00005 ABC transporter 36 169 4.7E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06610 8503bda85ec0c561d67aab745211db6e 274 SUPERFAMILY SSF52540 21 222 1.93E-63 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06610 8503bda85ec0c561d67aab745211db6e 274 SMART SM00382 45 219 5.3E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:3.40.50.2300 1 119 9.6E-30 T 29-03-2018 AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 6.8E-21 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 SMART SM00448 1 112 2.1E-31 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 SMART SM00862 145 216 3.1E-25 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 Gene3D G3DSA:1.10.10.10 120 223 8.8E-28 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS32040 c053b38d1f115f3328baab9f35400217 226 SUPERFAMILY SSF52172 1 172 1.66E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS16095 40abe61537fd7aba182c7272f53817c8 283 Gene3D G3DSA:3.40.50.720 2 282 7.5E-33 T 29-03-2018 AM474_RS16095 40abe61537fd7aba182c7272f53817c8 283 SUPERFAMILY SSF51735 1 279 2.5E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS16095 40abe61537fd7aba182c7272f53817c8 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 164 6.7E-8 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS03265 c64d41fe1358197beee4bd51154a471b 647 SUPERFAMILY SSF56349 99 401 7.06E-46 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS03265 c64d41fe1358197beee4bd51154a471b 647 Gene3D G3DSA:1.10.150.130 88 210 4.0E-17 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS03265 c64d41fe1358197beee4bd51154a471b 647 Gene3D G3DSA:1.10.443.10 211 401 6.2E-17 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS03265 c64d41fe1358197beee4bd51154a471b 647 Pfam PF00589 Phage integrase family 215 391 3.6E-15 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS03265 c64d41fe1358197beee4bd51154a471b 647 Pfam PF13356 Arm DNA-binding domain 3 87 2.5E-16 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM474_RS30190 bbd0484ac4bd304a960be91ebf43f888 149 SUPERFAMILY SSF47240 7 144 3.13E-7 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS30190 bbd0484ac4bd304a960be91ebf43f888 149 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 10 145 1.1E-43 T 29-03-2018 IPR011971 Conserved hypothetical protein CHP02284 AM474_RS30190 bbd0484ac4bd304a960be91ebf43f888 149 Gene3D G3DSA:1.20.1260.10 1 149 5.7E-28 T 29-03-2018 IPR012347 Ferritin-related AM474_RS30190 bbd0484ac4bd304a960be91ebf43f888 149 Pfam PF09537 Domain of unknown function (DUF2383) 9 117 1.2E-37 T 29-03-2018 IPR019052 Domain of unknown function DUF2383 AM474_RS30190 bbd0484ac4bd304a960be91ebf43f888 149 PIRSF PIRSF029477 1 149 5.3E-70 T 29-03-2018 IPR016920 Uncharacterised conserved protein UCP029477 AM474_RS24370 e8cce22ed00b52e97e9812f1fc1dbdbe 478 Gene3D G3DSA:1.20.5.340 21 474 3.9E-6 T 29-03-2018 AM474_RS24370 e8cce22ed00b52e97e9812f1fc1dbdbe 478 Pfam PF07196 Flagellin hook IN motif 127 186 8.2E-13 T 29-03-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 AM474_RS24370 e8cce22ed00b52e97e9812f1fc1dbdbe 478 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 107 1.6E-20 T 29-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 AM474_RS24370 e8cce22ed00b52e97e9812f1fc1dbdbe 478 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 234 459 1.0E-61 T 29-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 SMART SM00345 16 75 5.5E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 SUPERFAMILY SSF46785 7 79 2.19E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 Gene3D G3DSA:3.40.1410.10 75 244 2.0E-43 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 SMART SM00866 96 236 2.8E-33 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 Gene3D G3DSA:1.10.10.10 2 74 3.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 8.7E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 8.7E-10 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 SUPERFAMILY SSF64288 63 243 3.61E-47 T 29-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.5E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS31105 342ffc4e4ad6d2f1265da3cd5f2fe4dc 249 Pfam PF07702 UTRA domain 97 236 5.1E-37 T 29-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AM474_RS00460 6c507290d24bc9289e37c6d69fd89b35 116 SUPERFAMILY SSF54427 4 110 2.63E-8 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS00460 6c507290d24bc9289e37c6d69fd89b35 116 Gene3D G3DSA:3.10.450.50 1 114 5.2E-10 T 29-03-2018 AM474_RS06750 2e94e38c8f95d27f9790b11a8e4706cb 180 Gene3D G3DSA:3.40.430.10 4 173 3.5E-40 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS06750 2e94e38c8f95d27f9790b11a8e4706cb 180 SUPERFAMILY SSF53597 3 174 1.22E-37 T 29-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 AM474_RS06750 2e94e38c8f95d27f9790b11a8e4706cb 180 Pfam PF01872 RibD C-terminal domain 83 166 4.7E-15 T 29-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM474_RS00710 e2675f4e6b228780acc969175b45201d 287 SUPERFAMILY SSF56349 21 237 3.24E-14 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS00710 e2675f4e6b228780acc969175b45201d 287 Gene3D G3DSA:1.10.443.10 102 287 1.7E-14 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS00710 e2675f4e6b228780acc969175b45201d 287 Pfam PF12834 Phage integrase, N-terminal 2 89 6.1E-26 T 29-03-2018 IPR024457 Putative integrase, N-terminal AM474_RS00710 e2675f4e6b228780acc969175b45201d 287 Gene3D G3DSA:1.10.150.130 8 96 1.2E-4 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS00710 e2675f4e6b228780acc969175b45201d 287 Pfam PF12835 Integrase 103 232 8.2E-19 T 29-03-2018 IPR024456 Integrase catalytic domain, putative AM474_RS01195 e0e3ea1ab5c4ab77f1a63a66b1bc57e1 194 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 88 176 1.1E-6 T 29-03-2018 IPR034756 Type II secretion system (T2SS), protein M subtype b AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 Gene3D G3DSA:1.20.1580.10 106 415 6.0E-61 T 29-03-2018 AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 ProSitePatterns PS00211 ABC transporters family signature. 769 783 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 Gene3D G3DSA:3.40.50.300 8 42 0.18 T 29-03-2018 AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 SUPERFAMILY SSF52540 176 270 1.86E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 SUPERFAMILY SSF52540 21 102 1.86E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 SUPERFAMILY SSF52540 358 497 1.86E-27 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 Gene3D G3DSA:3.40.50.300 43 57 0.16 T 29-03-2018 AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 SUPERFAMILY SSF52540 623 853 2.16E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 SUPERFAMILY SSF52540 545 586 2.16E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03145 ac43602878c12597d75e65abb027ec4c 883 Gene3D G3DSA:3.40.50.300 538 883 8.0E-52 T 29-03-2018 AM474_RS12105 762f51db0907f9d276520ccde4611f38 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 42 109 1.0E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12105 762f51db0907f9d276520ccde4611f38 119 Gene3D G3DSA:1.10.760.10 8 110 4.3E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12105 762f51db0907f9d276520ccde4611f38 119 SUPERFAMILY SSF46626 14 110 5.7E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS25820 8d35fb4644a054036f6911b7d9bbf22c 116 Gene3D G3DSA:3.30.70.1060 1 116 6.1E-41 T 29-03-2018 AM474_RS25820 8d35fb4644a054036f6911b7d9bbf22c 116 SUPERFAMILY SSF54909 1 116 1.15E-36 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS25820 8d35fb4644a054036f6911b7d9bbf22c 116 Pfam PF03795 YCII-related domain 1 116 8.3E-31 T 29-03-2018 IPR005545 YCII-related AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 15 634 0.0 T 29-03-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 579 627 - T 29-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 42 0.0011 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 Gene3D G3DSA:2.60.40.420 504 635 1.7E-29 T 29-03-2018 IPR008972 Cupredoxin AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 Gene3D G3DSA:2.130.10.10 58 503 2.4E-162 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 SUPERFAMILY SSF49503 507 634 1.92E-35 T 29-03-2018 IPR008972 Cupredoxin AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 SUPERFAMILY SSF50974 60 504 3.01E-133 T 29-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 576 627 1.0E-4 T 29-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS06335 a6ce4b522df60b40a13d259fd0137b13 636 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 635 61.246 T 29-03-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 AM474_RS13535 42659172796250759bf1eb352d931854 144 SUPERFAMILY SSF54631 10 142 5.56E-33 T 29-03-2018 AM474_RS13535 42659172796250759bf1eb352d931854 144 SMART SM00116 15 62 4.5E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS13535 42659172796250759bf1eb352d931854 144 SMART SM00116 80 127 2.2E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS13535 42659172796250759bf1eb352d931854 144 Gene3D G3DSA:3.10.580.10 4 143 1.2E-28 T 29-03-2018 AM474_RS13535 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 14 61 1.0E-10 T 29-03-2018 IPR000644 CBS domain AM474_RS13535 42659172796250759bf1eb352d931854 144 Pfam PF00571 CBS domain 74 125 1.3E-11 T 29-03-2018 IPR000644 CBS domain AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 SUPERFAMILY SSF53383 119 480 1.07E-85 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 SUPERFAMILY SSF46785 15 92 2.4E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 6.5E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 6.5E-7 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 Gene3D G3DSA:3.90.1150.10 379 482 1.4E-18 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 Gene3D G3DSA:3.40.640.10 134 378 1.3E-42 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 SMART SM00345 24 83 5.4E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 Gene3D G3DSA:1.10.10.10 8 85 1.1E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 Pfam PF00155 Aminotransferase class I and II 149 402 5.2E-16 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS15610 29ae5c486e9bed3bc4a8e011d0352b1d 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.9E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:3.40.640.10 83 372 2.4E-40 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 Pfam PF00155 Aminotransferase class I and II 167 449 5.6E-24 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 SUPERFAMILY SSF46785 2 69 7.12E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 SUPERFAMILY SSF53383 98 467 3.85E-90 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:1.10.10.10 1 67 9.1E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 SMART SM00345 7 66 9.4E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.0E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS10530 51e6d3eecd731e702448303ea2390b23 471 Gene3D G3DSA:3.90.1150.10 373 469 2.7E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS15455 585e03e8bccfd8e8df15570741962d40 70 Pfam PF06568 Domain of unknown function (DUF1127) 25 60 1.2E-11 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 Gene3D G3DSA:3.40.50.720 123 283 1.9E-33 T 29-03-2018 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 SUPERFAMILY SSF53223 6 110 5.76E-27 T 29-03-2018 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 Gene3D G3DSA:3.40.50.10860 2 122 4.0E-38 T 29-03-2018 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 281 27.444 T 29-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 98 8.4E-22 T 29-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AM474_RS13565 761e61b455fca409645ae6bbd49ee2b7 284 SUPERFAMILY SSF51735 111 279 4.57E-37 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 SUPERFAMILY SSF52317 1 192 1.93E-54 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.0E-5 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.0E-5 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.3E-87 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.3E-37 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.8E-55 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 Gene3D G3DSA:3.40.50.880 1 194 7.6E-60 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.4E-13 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.4E-13 T 29-03-2018 AM474_RS11400 776bc65d8186776bac8b12ef520a2bb9 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.4E-13 T 29-03-2018 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 Gene3D G3DSA:3.20.20.140 61 359 1.2E-46 T 29-03-2018 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 SUPERFAMILY SSF51338 361 406 1.15E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 SUPERFAMILY SSF51338 17 51 1.15E-5 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 Gene3D G3DSA:2.30.40.10 8 60 8.9E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 Pfam PF07969 Amidohydrolase family 42 398 1.4E-51 T 29-03-2018 IPR013108 Amidohydrolase 3 AM474_RS12515 57294b2271035c05f4fee7cebfaea5c5 423 SUPERFAMILY SSF51556 51 370 3.84E-104 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 SMART SM00283 452 713 1.7E-81 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 SMART SM00304 383 437 1.1E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Gene3D G3DSA:3.30.450.20 90 227 1.3E-20 T 29-03-2018 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Gene3D G3DSA:3.30.450.20 228 340 5.8E-10 T 29-03-2018 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Pfam PF02743 Cache domain 90 333 5.4E-16 T 29-03-2018 IPR033479 Double Cache domain 1 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 525 681 1.9E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Gene3D G3DSA:1.10.287.950 483 679 2.8E-51 T 29-03-2018 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 SUPERFAMILY SSF58104 405 713 2.88E-82 T 29-03-2018 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Pfam PF00672 HAMP domain 384 433 1.1E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS01115 48c3ad135155c9de02adc71ce1be0794 714 Gene3D G3DSA:1.10.287.950 382 482 2.4E-8 T 29-03-2018 AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 Gene3D G3DSA:3.40.50.720 51 255 1.5E-58 T 29-03-2018 AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.4E-41 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 1.0E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 Gene3D G3DSA:3.40.50.10090 4 50 3.5E-11 T 29-03-2018 AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.4E-65 T 29-03-2018 AM474_RS28420 da63f311b437b57863b3e84822cee4ab 255 SUPERFAMILY SSF51735 10 253 6.22E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS18530 445d0d63298a5433fb056e824415a552 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.5E-20 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18530 445d0d63298a5433fb056e824415a552 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.083 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS18530 445d0d63298a5433fb056e824415a552 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 9.4E-48 T 29-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS18530 445d0d63298a5433fb056e824415a552 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.4E-23 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM474_RS18530 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.10.430.100 63 147 3.5E-24 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM474_RS18530 445d0d63298a5433fb056e824415a552 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18530 445d0d63298a5433fb056e824415a552 148 Gene3D G3DSA:3.40.5.10 1 49 8.6E-21 T 29-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS18530 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55653 60 148 4.45E-24 T 29-03-2018 IPR020069 Ribosomal protein L9, C-terminal AM474_RS18530 445d0d63298a5433fb056e824415a552 148 SUPERFAMILY SSF55658 1 56 4.53E-18 T 29-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM474_RS28320 329d10561037500a862df15908fa479e 339 Gene3D G3DSA:1.10.3720.10 9 328 3.7E-44 T 29-03-2018 AM474_RS28320 329d10561037500a862df15908fa479e 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 45 6.1E-6 T 29-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AM474_RS28320 329d10561037500a862df15908fa479e 339 SUPERFAMILY SSF161098 136 322 4.32E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS28320 329d10561037500a862df15908fa479e 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 9.0E-28 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS01240 2c94d1da5d5513ba2f43ba914fc51dca 267 PIRSF PIRSF006648 4 260 7.5E-15 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS01240 2c94d1da5d5513ba2f43ba914fc51dca 267 Pfam PF01061 ABC-2 type transporter 17 228 2.1E-31 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM474_RS01240 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 5.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS01240 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 37 58 5.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS01240 2c94d1da5d5513ba2f43ba914fc51dca 267 PRINTS PR00164 ABC-2 type transport system membrane protein signature 205 224 5.3E-8 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 Gene3D G3DSA:3.40.190.10 91 175 5.9E-17 T 29-03-2018 AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 SUPERFAMILY SSF46785 4 85 4.14E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 Gene3D G3DSA:3.40.190.10 176 264 7.8E-29 T 29-03-2018 AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 SUPERFAMILY SSF53850 89 294 3.41E-47 T 29-03-2018 AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-43 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03570 fb689b41eeb526df4c31e549b76f07bb 297 Gene3D G3DSA:1.10.10.10 3 83 1.8E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Gene3D G3DSA:2.30.38.10 380 462 7.5E-30 T 29-03-2018 AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 552 6.0E-19 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Gene3D G3DSA:3.40.50.980 21 218 3.4E-38 T 29-03-2018 AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Gene3D G3DSA:3.30.300.30 463 562 2.6E-29 T 29-03-2018 AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 SUPERFAMILY SSF56801 21 561 5.23E-151 T 29-03-2018 AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Gene3D G3DSA:3.40.50.980 219 379 9.2E-41 T 29-03-2018 AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS05820 a44c99c2c19067d6f505914fe99db2a9 562 Pfam PF00501 AMP-binding enzyme 30 469 6.2E-108 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS06200 0718f9b138791193820b87ef56314caf 195 Gene3D G3DSA:2.60.120.650 32 191 2.5E-17 T 29-03-2018 AM474_RS06200 0718f9b138791193820b87ef56314caf 195 Pfam PF08007 Cupin superfamily protein 88 188 3.2E-13 T 29-03-2018 IPR003347 JmjC domain AM474_RS06200 0718f9b138791193820b87ef56314caf 195 SUPERFAMILY SSF51197 82 189 4.67E-21 T 29-03-2018 AM474_RS26120 b613433f2cb46451a6bba2470f727d7c 397 Gene3D G3DSA:1.20.1250.20 6 204 3.0E-10 T 29-03-2018 AM474_RS26120 b613433f2cb46451a6bba2470f727d7c 397 Gene3D G3DSA:1.20.1250.20 206 384 2.3E-9 T 29-03-2018 AM474_RS26120 b613433f2cb46451a6bba2470f727d7c 397 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 379 1.5E-127 T 29-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB AM474_RS26120 b613433f2cb46451a6bba2470f727d7c 397 SUPERFAMILY SSF103473 9 380 6.8E-23 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 6.8E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 6.8E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 6.8E-15 T 29-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF46785 4 62 3.33E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 SMART SM00344 4 113 4.5E-38 T 29-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.6E-18 T 29-03-2018 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.3E-22 T 29-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:3.30.70.920 57 148 5.4E-24 T 29-03-2018 AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 Gene3D G3DSA:1.10.10.10 1 54 1.5E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30840 e2a523c485885e12328fcb3f16c988aa 153 SUPERFAMILY SSF54909 66 153 8.85E-20 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PIRSF PIRSF002111 384 551 7.8E-40 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PIRSF PIRSF002111 1 386 1.1E-178 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 189 277 1.94E-27 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 104 185 8.95E-15 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.3E-88 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 1 91 3.8E-9 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 429 536 8.95E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 361 435 6.6E-21 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 274 348 2.2E-25 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 1 112 1.33E-20 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 275 347 1.8E-26 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 362 434 9.7E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 190 260 1.4E-28 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 449 520 2.6E-21 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 103 171 1.3E-8 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SMART SM00316 19 87 2.0E-5 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 342 440 7.46E-23 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.5E-220 T 29-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 189 260 9.1E-22 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 448 520 1.1E-15 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 103 171 1.8E-11 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 19 85 3.7E-7 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 361 434 9.8E-19 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Pfam PF00575 S1 RNA binding domain 275 347 2.0E-21 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 451 545 1.2E-20 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 101 180 2.1E-7 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 Gene3D G3DSA:2.40.50.140 181 266 1.3E-26 T 29-03-2018 AM474_RS05040 7e45d1777c5edc21abf31241b8b041ba 559 SUPERFAMILY SSF50249 255 355 6.56E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS26880 5e01679976edb6f08f2c71d3fe486847 179 Pfam PF05751 FixH 12 155 1.3E-39 T 29-03-2018 IPR008620 Nitrogen fixation protein FixH AM474_RS29805 e62cd490499815d7d8cbe712d5a3331d 318 Pfam PF04773 FecR protein 115 205 2.0E-11 T 29-03-2018 IPR006860 FecR protein AM474_RS29805 e62cd490499815d7d8cbe712d5a3331d 318 Pfam PF16220 Domain of unknown function (DUF4880) 12 51 1.8E-11 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS29805 e62cd490499815d7d8cbe712d5a3331d 318 PIRSF PIRSF018266 1 318 5.5E-63 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 4 350 1.5E-110 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 355 36.833 T 29-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 Gene3D G3DSA:3.40.50.2000 172 349 1.1E-32 T 29-03-2018 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 SUPERFAMILY SSF53756 4 355 6.81E-116 T 29-03-2018 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 183 339 9.9E-36 T 29-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 Gene3D G3DSA:3.40.50.2000 1 171 7.3E-42 T 29-03-2018 AM474_RS21330 872b4d08fe3378fb46826eea34503bd7 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 141 1.0E-40 T 29-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS03055 14dc80151a401808055bc8d09ac124d5 119 Pfam PF11190 Protein of unknown function (DUF2976) 32 118 1.5E-32 T 29-03-2018 IPR021356 Integrating conjugative element protein PFL4702 AM474_RS03055 14dc80151a401808055bc8d09ac124d5 119 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 16 119 9.5E-45 T 29-03-2018 IPR021356 Integrating conjugative element protein PFL4702 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 Gene3D G3DSA:1.10.1040.10 174 298 6.2E-32 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 294 6.2E-36 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 295 6.2E-147 T 29-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 Gene3D G3DSA:3.40.50.720 2 173 2.1E-33 T 29-03-2018 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.9E-51 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 SUPERFAMILY SSF48179 163 296 1.7E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 SUPERFAMILY SSF51735 2 163 1.04E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07180 2eda64d25e255a292cae842a27fc5400 298 PIRSF PIRSF000103 1 297 2.9E-79 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 529 8.4E-212 T 29-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 1.3E-121 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 477 5.5E-151 T 29-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 29-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 Gene3D G3DSA:1.20.210.10 22 530 3.2E-218 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14255 cc5bee05f25a00c94538a6354be68929 530 SUPERFAMILY SSF81442 23 529 6.54E-193 T 29-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:1.10.260.40 1 72 1.4E-15 T 29-03-2018 AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF07883 Cupin domain 108 175 1.2E-19 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 SMART SM00530 6 61 4.3E-14 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 Gene3D G3DSA:2.60.120.10 73 182 1.3E-18 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 Pfam PF01381 Helix-turn-helix 8 59 1.4E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF47413 3 67 1.27E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS16305 de607ecd043cf1e84278d32a59bf1038 182 SUPERFAMILY SSF51182 46 182 4.01E-27 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25060 c472f408a3f8710004637eafa458ac2f 248 Pfam PF13649 Methyltransferase domain 39 124 3.4E-13 T 29-03-2018 AM474_RS25060 c472f408a3f8710004637eafa458ac2f 248 SUPERFAMILY SSF53335 3 158 1.13E-28 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS25060 c472f408a3f8710004637eafa458ac2f 248 Gene3D G3DSA:3.40.50.150 1 176 6.3E-21 T 29-03-2018 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 PIRSF PIRSF006092 1 30 74.0 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 PIRSF PIRSF006092 27 126 7.4E-24 T 29-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 SUPERFAMILY SSF54534 48 125 3.66E-16 T 29-03-2018 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF14760 Rnk N-terminus 4 43 4.7E-15 T 29-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 6.9E-20 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:3.10.50.30 44 134 1.4E-22 T 29-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM474_RS16450 e17b249327d3b6e53a338b0b8c34daf5 134 Gene3D G3DSA:1.10.286.20 3 43 3.2E-16 T 29-03-2018 AM474_RS30555 4e1297f4620aa96ba02808fa37ca4090 399 SUPERFAMILY SSF46689 335 365 1.72E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30555 4e1297f4620aa96ba02808fa37ca4090 399 Gene3D G3DSA:1.10.10.60 302 367 2.1E-8 T 29-03-2018 AM474_RS30555 4e1297f4620aa96ba02808fa37ca4090 399 Pfam PF13556 PucR C-terminal helix-turn-helix domain 332 386 5.3E-14 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM474_RS19840 6681b4301aa2dc8ea84657da9cfa9a68 206 Pfam PF04403 Paraquat-inducible protein A 43 198 5.5E-56 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 Gene3D G3DSA:3.40.630.10 206 427 3.2E-77 T 29-03-2018 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 Gene3D G3DSA:3.40.630.10 2 96 2.7E-35 T 29-03-2018 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 12 423 8.5E-138 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 SUPERFAMILY SSF101821 88 213 1.19E-32 T 29-03-2018 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 425 60.355 T 29-03-2018 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 301 317 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 109 129 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 76 92 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 144 161 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 390 405 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 1.5E-41 T 29-03-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 SUPERFAMILY SSF53187 214 423 2.17E-107 T 29-03-2018 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 SUPERFAMILY SSF53187 4 87 2.17E-107 T 29-03-2018 AM474_RS05515 d50e0ac7e465601f3fe9c72710eb1f63 429 Gene3D G3DSA:2.30.250.10 97 205 2.5E-41 T 29-03-2018 AM474_RS03820 331bd81fc2bab98d884feb64e5b3ba36 64 SUPERFAMILY SSF55729 1 60 1.67E-6 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS03820 331bd81fc2bab98d884feb64e5b3ba36 64 Gene3D G3DSA:3.40.630.30 1 64 1.1E-8 T 29-03-2018 AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 SUPERFAMILY SSF53850 92 294 2.17E-36 T 29-03-2018 AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.2E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 Pfam PF03466 LysR substrate binding domain 90 294 5.6E-33 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 SUPERFAMILY SSF46785 3 85 1.65E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 Gene3D G3DSA:1.10.10.10 2 86 6.8E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 Gene3D G3DSA:3.40.190.10 180 268 2.2E-24 T 29-03-2018 AM474_RS27915 f3dbb66abcdddc0402c2fa5cbb79c44e 304 Gene3D G3DSA:3.40.190.10 94 179 6.7E-13 T 29-03-2018 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 270 451 1.1E-31 T 29-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 Gene3D G3DSA:3.30.420.40 257 500 6.9E-60 T 29-03-2018 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 384 - T 29-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 SUPERFAMILY SSF53067 11 261 6.19E-59 T 29-03-2018 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 259 1.2E-61 T 29-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 Gene3D G3DSA:3.30.420.40 6 256 4.2E-71 T 29-03-2018 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 SUPERFAMILY SSF53067 261 498 2.31E-55 T 29-03-2018 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 TIGRFAM TIGR01312 XylB: xylulokinase 12 498 9.8E-159 T 29-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 AM474_RS31305 a5ca2b574ecb9fc38062cd0e35f73308 502 PIRSF PIRSF000538 8 501 2.1E-118 T 29-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AM474_RS08990 f7b95fb59c60e6c9d6ff804046208860 104 Gene3D G3DSA:3.40.1440.10 2 89 3.7E-5 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS08990 f7b95fb59c60e6c9d6ff804046208860 104 Pfam PF01541 GIY-YIG catalytic domain 14 84 1.3E-11 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS08990 f7b95fb59c60e6c9d6ff804046208860 104 SUPERFAMILY SSF82771 15 83 1.44E-9 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS02130 c8674a912b35cb8778e9788f23f373e0 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 3.1E-54 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS02130 c8674a912b35cb8778e9788f23f373e0 427 Gene3D G3DSA:3.50.50.60 18 402 6.7E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02130 c8674a912b35cb8778e9788f23f373e0 427 SUPERFAMILY SSF51905 345 413 7.34E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02130 c8674a912b35cb8778e9788f23f373e0 427 SUPERFAMILY SSF51905 30 253 7.34E-45 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 SUPERFAMILY SSF55729 125 257 7.89E-19 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 Pfam PF00583 Acetyltransferase (GNAT) family 169 237 4.2E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 Gene3D G3DSA:3.40.630.30 124 262 2.6E-19 T 29-03-2018 AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 SUPERFAMILY SSF54593 4 115 2.15E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 Gene3D G3DSA:3.10.180.10 7 123 3.4E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS04870 8745a1e10e459aabbf7c4476cb02b19d 267 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 112 3.2E-4 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS03925 5559bdc47d6a4b689c9b8795436c98fb 60 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 3 60 3.7E-25 T 29-03-2018 IPR012667 Cobalt transporter subunit CbtB, putative AM474_RS03925 5559bdc47d6a4b689c9b8795436c98fb 60 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 11 60 4.7E-23 T 29-03-2018 IPR012667 Cobalt transporter subunit CbtB, putative AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 Gene3D G3DSA:3.30.499.10 434 537 1.7E-5 T 29-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 SUPERFAMILY SSF52016 7 114 5.81E-34 T 29-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 Gene3D G3DSA:3.50.30.10 8 136 1.2E-37 T 29-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 Pfam PF01989 Protein of unknown function DUF126 28 103 2.1E-29 T 29-03-2018 IPR002840 Aconitase X swivel domain, putative AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 SUPERFAMILY SSF53732 439 535 4.45E-6 T 29-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 PIRSF PIRSF036630 3 580 2.9E-293 T 29-03-2018 IPR012047 Aconitase X, putative AM474_RS25350 8f3fb0f252760c3f8969d2139e6b3192 580 Pfam PF04412 Protein of unknown function (DUF521) 161 561 2.3E-147 T 29-03-2018 IPR007506 Aconitase X catalytic domain, putative AM474_RS16050 e3804477997e34626629aecd705085ad 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 29-03-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 AM474_RS16050 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 3 19 5.7E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16050 e3804477997e34626629aecd705085ad 55 PRINTS PR00163 Rubredoxin signature 33 49 5.7E-9 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16050 e3804477997e34626629aecd705085ad 55 Gene3D G3DSA:2.20.28.10 1 54 6.7E-27 T 29-03-2018 AM474_RS16050 e3804477997e34626629aecd705085ad 55 SUPERFAMILY SSF57802 1 53 6.73E-23 T 29-03-2018 AM474_RS16050 e3804477997e34626629aecd705085ad 55 Pfam PF00301 Rubredoxin 3 49 2.7E-23 T 29-03-2018 IPR024935 Rubredoxin domain GO:0005506 AM474_RS16050 e3804477997e34626629aecd705085ad 55 PIRSF PIRSF000071 1 55 6.7E-25 T 29-03-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 Gene3D G3DSA:3.30.420.10 2 159 1.1E-48 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 6.2E-41 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.2E-41 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.2E-41 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 6.2E-41 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.2E-41 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 SUPERFAMILY SSF53098 3 156 1.74E-50 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 29-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.3E-68 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 4.0E-60 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS23560 9a32773c3b60ea9c62c6837fd87285a5 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.81 T 29-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM474_RS19905 5151fb3fee0e91e65021bbffcc016c98 412 Pfam PF03577 Peptidase family C69 11 214 1.8E-8 T 29-03-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 AM474_RS19905 5151fb3fee0e91e65021bbffcc016c98 412 Gene3D G3DSA:3.60.60.10 1 294 6.3E-35 T 29-03-2018 AM474_RS01875 dce38e848c0c3937fcb113ae8e5e82d1 197 Gene3D G3DSA:2.60.60.30 20 189 1.7E-51 T 29-03-2018 AM474_RS01875 dce38e848c0c3937fcb113ae8e5e82d1 197 Pfam PF02342 TerD domain 1 182 1.2E-53 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Gene3D G3DSA:1.20.200.10 137 416 3.0E-88 T 29-03-2018 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.5E-6 T 29-03-2018 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.5E-6 T 29-03-2018 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 1.5E-6 T 29-03-2018 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 5.3E-221 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Gene3D G3DSA:1.10.275.10 1 136 2.1E-63 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Pfam PF00206 Lyase 10 340 5.0E-106 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 SUPERFAMILY SSF48557 3 459 5.18E-155 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Pfam PF10415 Fumarase C C-terminus 406 458 1.5E-26 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Gene3D G3DSA:1.10.40.30 417 457 9.7E-27 T 29-03-2018 AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.9E-32 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.9E-32 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.9E-32 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.9E-32 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS22935 300978fbb17dbc2fa14185dea57ee997 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 2 460 89.565 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 SMART SM01236 174 276 3.7E-21 T 29-03-2018 AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 SUPERFAMILY SSF48613 107 321 5.72E-25 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 Gene3D G3DSA:1.10.1240.20 7 93 3.7E-43 T 29-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 Gene3D G3DSA:1.20.910.10 99 328 2.0E-27 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 Pfam PF14515 Haem-oxygenase-associated N-terminal helices 1 93 6.3E-51 T 29-03-2018 IPR029474 Haem-oxygenase-associated, N-terminal helices AM474_RS06915 aa36c6781f69877ab73fe1e86b68288e 328 Pfam PF14518 Iron-containing redox enzyme 159 276 1.3E-13 T 29-03-2018 IPR028201 PqqC-like protein AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 PRINTS PR00332 Histidine triad family signature 101 111 6.5E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 PRINTS PR00332 Histidine triad family signature 12 28 6.5E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 PRINTS PR00332 Histidine triad family signature 33 51 6.5E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 Pfam PF01230 HIT domain 18 114 1.0E-26 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 Gene3D G3DSA:3.30.428.10 6 143 5.1E-37 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS05790 3c856c4745a3c8e602955e171693b1b4 145 SUPERFAMILY SSF54197 6 142 2.84E-39 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS22820 78f341299c5716d16b222353bd2f352b 213 Gene3D G3DSA:3.60.15.10 7 213 2.3E-38 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22820 78f341299c5716d16b222353bd2f352b 213 SMART SM00849 18 195 1.1E-33 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22820 78f341299c5716d16b222353bd2f352b 213 Pfam PF00753 Metallo-beta-lactamase superfamily 15 195 8.7E-30 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS22820 78f341299c5716d16b222353bd2f352b 213 SUPERFAMILY SSF56281 8 212 1.34E-51 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS20180 05e6d2d6b57c870476b7753c857be03d 487 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS20180 05e6d2d6b57c870476b7753c857be03d 487 PIRSF PIRSF006060 2 484 4.9E-80 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS20180 05e6d2d6b57c870476b7753c857be03d 487 Pfam PF00324 Amino acid permease 20 476 4.6E-138 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS03090 36ab0e8ee5d239fbf0fd1842e67a4838 254 Pfam PF13462 Thioredoxin 65 207 4.3E-15 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS03090 36ab0e8ee5d239fbf0fd1842e67a4838 254 Gene3D G3DSA:3.40.30.10 62 239 6.7E-28 T 29-03-2018 AM474_RS03090 36ab0e8ee5d239fbf0fd1842e67a4838 254 SUPERFAMILY SSF52833 25 229 4.16E-31 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS10780 ca80d31f041f07457452fef3de5b014f 239 SMART SM00873 64 216 1.7E-15 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM474_RS10780 ca80d31f041f07457452fef3de5b014f 239 Gene3D G3DSA:3.50.40.10 60 207 5.2E-21 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM474_RS10780 ca80d31f041f07457452fef3de5b014f 239 Pfam PF03483 B3/4 domain 66 195 2.1E-16 T 29-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM474_RS10780 ca80d31f041f07457452fef3de5b014f 239 SUPERFAMILY SSF56037 54 213 1.39E-26 T 29-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AM474_RS18160 6ad4723d104ee53a1109d1352d49ff63 472 SUPERFAMILY SSF102588 179 276 1.05E-32 T 29-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM474_RS18160 6ad4723d104ee53a1109d1352d49ff63 472 SUPERFAMILY SSF102588 303 447 1.05E-32 T 29-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM474_RS18160 6ad4723d104ee53a1109d1352d49ff63 472 Gene3D G3DSA:3.40.50.10320 177 464 1.3E-28 T 29-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 AM474_RS18160 6ad4723d104ee53a1109d1352d49ff63 472 Pfam PF02585 GlcNAc-PI de-N-acetylase 183 352 3.6E-13 T 29-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 4.1E-15 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.1E-15 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.1E-15 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 359 374 4.1E-15 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 4.1E-15 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.6E-22 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 6.6E-22 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 6.6E-22 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.6E-22 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.6E-22 T 29-03-2018 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 281 1.7E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 Gene3D G3DSA:3.50.50.60 245 311 5.3E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 Gene3D G3DSA:3.50.50.60 1 123 1.1E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 Gene3D G3DSA:3.50.50.60 124 244 2.5E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 SUPERFAMILY SSF51905 194 323 5.4E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16060 0e7ed2bb6ffaf6a0b50497e751bb2874 384 SUPERFAMILY SSF51905 1 164 5.4E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 Gene3D G3DSA:1.10.1660.10 6 64 3.9E-19 T 29-03-2018 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF00376 MerR family regulatory protein 11 47 2.1E-12 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 Pfam PF09278 MerR, DNA binding 52 117 8.1E-16 T 29-03-2018 IPR015358 Transcription regulator MerR, DNA binding AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 SUPERFAMILY SSF46955 10 132 3.0E-28 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 9 149 2.0E-74 T 29-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 Gene3D G3DSA:1.10.1660.10 65 140 1.1E-10 T 29-03-2018 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 2.9E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 2.9E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 2.9E-13 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS30980 b07595a8d55f6baf7101ceb045b8bfa1 156 SMART SM00422 10 78 3.8E-28 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.40.50.450 126 455 2.5E-97 T 29-03-2018 AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF14793 Domain of unknown function (DUF4478) 10 115 2.0E-44 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 SUPERFAMILY SSF102405 122 331 2.14E-41 T 29-03-2018 AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 Gene3D G3DSA:3.30.1850.10 9 117 4.4E-46 T 29-03-2018 IPR027820 Domain of unknown function DUF4478 AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF03641 Possible lysine decarboxylase 192 331 2.0E-31 T 29-03-2018 IPR031100 LOG family AM474_RS10445 44087d2f33d192823aa8bb0e61aa743e 461 Pfam PF11892 Domain of unknown function (DUF3412) 335 456 6.7E-56 T 29-03-2018 IPR021826 Domain of unknown function DUF3412 AM474_RS19155 dcfede94b1d3f1e218f227e2e1f64987 309 Gene3D G3DSA:3.40.50.1820 24 309 1.2E-42 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS19155 dcfede94b1d3f1e218f227e2e1f64987 309 SUPERFAMILY SSF53474 27 305 2.78E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS19155 dcfede94b1d3f1e218f227e2e1f64987 309 Pfam PF00561 alpha/beta hydrolase fold 33 135 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 282 2.6E-110 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.30.70.260 1 83 1.8E-23 T 29-03-2018 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 282 49.118 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF55021 3 84 1.75E-14 T 29-03-2018 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 Gene3D G3DSA:3.40.50.170 84 280 6.6E-55 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.8E-64 T 29-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 PIRSF PIRSF036480 1 283 1.9E-119 T 29-03-2018 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 SUPERFAMILY SSF53328 87 283 1.96E-62 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS21835 157725f751454ca11ae9737cff042b70 283 Pfam PF00551 Formyl transferase 87 261 8.0E-39 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS06350 1fe5a705cf59e8d5d3b1495e5af0eb7a 275 Pfam PF12679 ABC-2 family transporter protein 5 273 4.0E-37 T 29-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 22 438 5.0E-201 T 29-03-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 SUPERFAMILY SSF52540 96 365 1.38E-97 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 Gene3D G3DSA:3.40.50.300 74 359 2.5E-88 T 29-03-2018 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 SMART SM00382 162 343 2.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 2.3E-10 T 29-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 20 438 4.8E-172 T 29-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 29-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS27705 26a89838ce8b5a7e78c1bf4de5382a2d 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.5E-78 T 29-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 165 2.7E-60 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 4.6E-258 T 29-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.1220 191 354 8.7E-50 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52518 374 567 5.31E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52518 4 179 1.3E-65 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.970 355 565 5.6E-45 T 29-03-2018 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.2E-41 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 7.0E-49 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 SUPERFAMILY SSF52467 189 360 4.36E-62 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS19780 f84c58e90485a051c87b2170070c3456 574 Gene3D G3DSA:3.40.50.970 2 190 4.6E-65 T 29-03-2018 AM474_RS17895 0b976b093bf043b7ea32e3f53c8b8bec 594 SUPERFAMILY SSF53098 201 346 1.97E-14 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS17895 0b976b093bf043b7ea32e3f53c8b8bec 594 Gene3D G3DSA:1.10.10.60 7 54 0.0051 T 29-03-2018 AM474_RS17895 0b976b093bf043b7ea32e3f53c8b8bec 594 Gene3D G3DSA:3.30.420.10 150 360 7.8E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS17895 0b976b093bf043b7ea32e3f53c8b8bec 594 Pfam PF00665 Integrase core domain 153 304 2.5E-11 T 29-03-2018 IPR001584 Integrase, catalytic core GO:0015074 AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 Pfam PF01011 PQQ enzyme repeat 732 766 8.1E-6 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 Gene3D G3DSA:2.140.10.10 158 798 4.3E-103 T 29-03-2018 AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SUPERFAMILY SSF50998 574 801 4.06E-150 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SUPERFAMILY SSF50998 164 539 4.06E-150 T 29-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 Pfam PF13360 PQQ-like domain 236 477 1.8E-9 T 29-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SMART SM00564 357 398 9.4 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SMART SM00564 426 476 89.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SMART SM00564 222 253 2.3E-5 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SMART SM00564 723 756 0.0045 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 SMART SM00564 300 332 120.0 T 29-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM474_RS31070 13c8bdc4b1fd47af7fe64edc11418531 803 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 801 0.0 T 29-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 AM474_RS25825 a2536d1f44639943c21688e52da97aa9 249 Pfam PF05988 Bacterial protein of unknown function (DUF899) 6 234 1.8E-96 T 29-03-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like AM474_RS25825 a2536d1f44639943c21688e52da97aa9 249 Gene3D G3DSA:3.40.30.10 19 204 1.5E-18 T 29-03-2018 AM474_RS25825 a2536d1f44639943c21688e52da97aa9 249 SUPERFAMILY SSF52833 61 200 4.93E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32360 91df7df0d5f37ec431fa9ed58d0e7245 209 Pfam PF01553 Acyltransferase 33 154 2.1E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS32360 91df7df0d5f37ec431fa9ed58d0e7245 209 SMART SM00563 34 157 5.6E-17 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS32360 91df7df0d5f37ec431fa9ed58d0e7245 209 SUPERFAMILY SSF69593 17 205 1.12E-32 T 29-03-2018 AM474_RS32360 91df7df0d5f37ec431fa9ed58d0e7245 209 Gene3D G3DSA:3.40.1130.10 17 204 8.1E-32 T 29-03-2018 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 Pfam PF01564 Spermine/spermidine synthase domain 57 236 6.7E-63 T 29-03-2018 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:2.30.140.10 2 54 1.0E-14 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 78 91 - T 29-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 Gene3D G3DSA:3.40.50.150 55 283 3.8E-45 T 29-03-2018 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 TIGRFAM TIGR00417 speE: spermidine synthase 4 275 9.8E-107 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 2 281 39.997 T 29-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 Pfam PF17284 Spermidine synthase tetramerisation domain 10 54 6.8E-15 T 29-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 AM474_RS27655 67096b0a38e9b108e53e09100a4c6013 286 SUPERFAMILY SSF53335 3 281 2.26E-89 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 76 2.0E-8 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 SUPERFAMILY SSF46767 78 158 4.05E-31 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 Gene3D G3DSA:1.10.10.10 75 160 2.3E-33 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 SUPERFAMILY SSF53155 5 84 2.94E-16 T 29-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 159 41.728 T 29-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 158 1.9E-31 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 4.9E-35 T 29-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AM474_RS23815 ca24b024ed0e0052bbf948d1b64e6be6 173 Gene3D G3DSA:3.30.160.70 1 74 3.4E-18 T 29-03-2018 AM474_RS03505 1ef84922c660fd95a85b2b6f8cf53cc6 144 Pfam PF07681 DoxX 16 103 1.8E-20 T 29-03-2018 IPR032808 DoxX family AM474_RS10870 3b54836b1fa5b9385a9b7d9c79339b7f 388 Gene3D G3DSA:2.130.10.10 17 162 9.3E-16 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS10870 3b54836b1fa5b9385a9b7d9c79339b7f 388 Gene3D G3DSA:2.130.10.10 163 386 7.3E-32 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS10870 3b54836b1fa5b9385a9b7d9c79339b7f 388 SUPERFAMILY SSF50974 7 353 6.54E-51 T 29-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 AM474_RS10870 3b54836b1fa5b9385a9b7d9c79339b7f 388 Pfam PF10282 Lactonase, 7-bladed beta-propeller 30 384 4.4E-114 T 29-03-2018 IPR019405 Lactonase, 7-bladed beta propeller AM474_RS25665 f7a0f7666fc6327d47dec39f4c091c38 209 Pfam PF00510 Cytochrome c oxidase subunit III 20 207 8.8E-17 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25665 f7a0f7666fc6327d47dec39f4c091c38 209 SUPERFAMILY SSF81452 18 207 5.49E-60 T 29-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS25665 f7a0f7666fc6327d47dec39f4c091c38 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 209 5.4E-86 T 29-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 AM474_RS25665 f7a0f7666fc6327d47dec39f4c091c38 209 Gene3D G3DSA:1.20.120.80 24 209 1.2E-51 T 29-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS22725 f7d5caf70843ad0f4f1448a72f6eeff6 144 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 141 1.3E-24 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS22725 f7d5caf70843ad0f4f1448a72f6eeff6 144 Gene3D G3DSA:3.30.1330.40 1 142 8.3E-28 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS22725 f7d5caf70843ad0f4f1448a72f6eeff6 144 SUPERFAMILY SSF55298 7 142 1.08E-44 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS00835 ed7a958a89240083825fa7a6ae335045 355 Gene3D G3DSA:3.20.20.30 3 348 3.2E-76 T 29-03-2018 AM474_RS00835 ed7a958a89240083825fa7a6ae335045 355 Pfam PF00296 Luciferase-like monooxygenase 14 317 1.2E-75 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS00835 ed7a958a89240083825fa7a6ae335045 355 SUPERFAMILY SSF51679 12 343 2.88E-79 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS32150 3161de5b2b7b96fc37ab622434691450 408 Gene3D G3DSA:1.20.1250.20 209 399 2.6E-26 T 29-03-2018 AM474_RS32150 3161de5b2b7b96fc37ab622434691450 408 SUPERFAMILY SSF103473 21 401 1.16E-45 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS32150 3161de5b2b7b96fc37ab622434691450 408 Gene3D G3DSA:1.20.1250.20 19 208 1.0E-15 T 29-03-2018 AM474_RS32150 3161de5b2b7b96fc37ab622434691450 408 Pfam PF07690 Major Facilitator Superfamily 40 357 5.8E-27 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS30335 23b24e72cc0763bf901d7498e2487b22 225 SUPERFAMILY SSF161098 22 214 2.09E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS30335 23b24e72cc0763bf901d7498e2487b22 225 Gene3D G3DSA:1.10.3720.10 3 225 1.2E-38 T 29-03-2018 AM474_RS30335 23b24e72cc0763bf901d7498e2487b22 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 224 9.5E-23 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS30335 23b24e72cc0763bf901d7498e2487b22 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 114 3.4E-13 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS12810 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Gene3D G3DSA:3.10.20.30 1 66 5.2E-26 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS12810 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 Pfam PF02597 ThiS family 3 66 3.9E-17 T 29-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 AM474_RS12810 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 2.2E-24 T 29-03-2018 IPR010035 ThiS, thiamine-biosynthesis AM474_RS12810 73dd1ba9fd57972ee7f3c15ccc9f8f79 66 SUPERFAMILY SSF54285 2 65 5.5E-20 T 29-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM474_RS11850 3847eba0a023d26aed7a4833affc60bb 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 2.5E-22 T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM474_RS11850 3847eba0a023d26aed7a4833affc60bb 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 29-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 SUPERFAMILY SSF55874 365 523 3.93E-33 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 3.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 3.0E-9 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00091 196 260 9.1E-4 T 29-03-2018 IPR000014 PAS domain AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00388 309 375 2.0E-17 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:1.10.287.130 302 371 7.3E-16 T 29-03-2018 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 417 523 1.8E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:3.30.565.10 373 526 5.5E-30 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 SMART SM00387 416 527 6.0E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 374 8.4E-15 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 Gene3D G3DSA:3.30.450.20 180 301 2.4E-6 T 29-03-2018 AM474_RS20615 ea7302b9cc30d0a823257b74c6ab81ae 530 SUPERFAMILY SSF47384 298 372 1.77E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 SUPERFAMILY SSF51658 1 270 1.52E-75 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 SUPERFAMILY SSF54593 292 621 3.87E-64 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Gene3D G3DSA:3.20.20.150 5 284 1.4E-52 T 29-03-2018 AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 294 426 1.8E-37 T 29-03-2018 AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Gene3D G3DSA:3.10.180.10 293 435 2.5E-14 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Gene3D G3DSA:3.10.180.10 436 633 7.2E-40 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 1.2E-36 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS13575 4a2a3084d09c9f2cdd217c5d309b2e10 634 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 441 565 6.6E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 Pfam PF00582 Universal stress protein family 1 156 4.9E-26 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 Gene3D G3DSA:3.40.50.620 1 164 4.2E-26 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 134 156 7.1E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 2 20 7.1E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 PRINTS PR01438 Universal stress protein signature 116 128 7.1E-5 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS27995 80575ee234200efaddd5d024b43d1167 165 SUPERFAMILY SSF52402 1 156 2.93E-26 T 29-03-2018 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF47203 226 379 2.09E-58 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.0E-27 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.4E-48 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:2.40.110.10 120 215 3.7E-40 T 29-03-2018 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.20.140.10 216 382 4.5E-60 T 29-03-2018 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Gene3D G3DSA:1.10.540.10 1 119 2.3E-34 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 SUPERFAMILY SSF56645 1 240 2.88E-81 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.9E-30 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS22370 788120fe3492a316d17b68fb7fa15792 387 PIRSF PIRSF016578 3 379 4.1E-22 T 29-03-2018 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 Pfam PF00672 HAMP domain 239 278 3.9E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 Gene3D G3DSA:1.10.287.950 336 539 1.2E-54 T 29-03-2018 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 Gene3D G3DSA:1.10.287.950 116 335 8.3E-8 T 29-03-2018 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 SUPERFAMILY SSF58104 259 567 1.2E-78 T 29-03-2018 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 SMART SM00283 306 567 2.1E-81 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 SMART SM00304 326 386 13.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 SMART SM00304 239 291 1.1E-8 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 433 462 3.3E-8 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 320 349 3.3E-8 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00105 25ae5329e9b6492feea5a7adfa29e3a0 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 534 1.1E-44 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS27490 21f48ed5ec353fe8a4a5562ff9c4ac8a 518 Pfam PF06812 ImpA, N-terminal, type VI secretion system 17 127 5.9E-30 T 29-03-2018 IPR010657 ImpA, N-terminal AM474_RS27490 21f48ed5ec353fe8a4a5562ff9c4ac8a 518 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 12 484 1.2E-134 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AM474_RS27490 21f48ed5ec353fe8a4a5562ff9c4ac8a 518 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 225 483 2.5E-77 T 29-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 AM474_RS28390 210a07cf5f4495454456d73a6204a796 562 SUPERFAMILY SSF47226 8 125 1.0E-6 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS28390 210a07cf5f4495454456d73a6204a796 562 Gene3D G3DSA:1.20.120.160 305 408 0.082 T 29-03-2018 AM474_RS28390 210a07cf5f4495454456d73a6204a796 562 Gene3D G3DSA:1.20.120.160 5 134 2.5E-6 T 29-03-2018 AM474_RS28390 210a07cf5f4495454456d73a6204a796 562 Gene3D G3DSA:1.20.120.160 429 561 5.7E-7 T 29-03-2018 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 4.4E-49 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 Gene3D G3DSA:3.30.1400.10 148 280 3.6E-52 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 277 5.1E-106 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 SUPERFAMILY SSF64383 147 283 2.75E-47 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 SMART SM00771 147 277 7.5E-71 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 277 8.0E-70 T 29-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 AM474_RS26765 54d08decb709160595bd8a5d8e80d8fa 289 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 279 23.784 T 29-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 AM474_RS15535 d7827f72ac225aac24ae7b78080ca815 142 Pfam PF00892 EamA-like transporter family 4 139 4.8E-25 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS15535 d7827f72ac225aac24ae7b78080ca815 142 SUPERFAMILY SSF103481 46 141 5.1E-20 T 29-03-2018 AM474_RS12090 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF07728 AAA domain (dynein-related subfamily) 27 161 1.7E-31 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM474_RS12090 6cd70c5ed376a551b3443eb30c54645a 260 SUPERFAMILY SSF52540 14 232 1.45E-33 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12090 6cd70c5ed376a551b3443eb30c54645a 260 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 174 256 2.6E-30 T 29-03-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AM474_RS12090 6cd70c5ed376a551b3443eb30c54645a 260 Gene3D G3DSA:3.40.50.300 14 167 2.0E-23 T 29-03-2018 AM474_RS16570 4fb8f40f2b1edaf5e60564e76d387a85 192 Pfam PF00924 Mechanosensitive ion channel 60 181 4.0E-14 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS16570 4fb8f40f2b1edaf5e60564e76d387a85 192 Gene3D G3DSA:2.30.30.60 119 179 1.8E-15 T 29-03-2018 AM474_RS16570 4fb8f40f2b1edaf5e60564e76d387a85 192 SUPERFAMILY SSF82861 19 96 3.27E-6 T 29-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AM474_RS16570 4fb8f40f2b1edaf5e60564e76d387a85 192 SUPERFAMILY SSF50182 104 179 6.87E-10 T 29-03-2018 IPR010920 LSM domain AM474_RS11830 9de108a888969c006509a79a7474adcd 204 Pfam PF14300 Domain of unknown function (DUF4375) 73 194 2.2E-25 T 29-03-2018 IPR025402 Domain of unknown function DUF4375 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 Gene3D G3DSA:3.40.140.10 2 108 1.6E-14 T 29-03-2018 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 SUPERFAMILY SSF54001 113 249 6.38E-10 T 29-03-2018 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 Gene3D G3DSA:3.90.1720.10 109 259 1.1E-7 T 29-03-2018 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 Pfam PF00877 NlpC/P60 family 116 242 1.2E-11 T 29-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 SMART SM00232 1 124 8.5E-11 T 29-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 SUPERFAMILY SSF102712 3 136 4.97E-24 T 29-03-2018 AM474_RS02320 1f6bc2f3bc2df05e87f327f805c2bf82 264 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 99 1.1E-17 T 29-03-2018 IPR028090 JAB domain, prokaryotic AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 Gene3D G3DSA:3.40.50.620 1 160 1.7E-15 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 SUPERFAMILY SSF52402 2 157 8.2E-17 T 29-03-2018 AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 PRINTS PR01438 Universal stress protein signature 243 255 1.4E-8 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 PRINTS PR01438 Universal stress protein signature 1 11 1.4E-8 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 PRINTS PR01438 Universal stress protein signature 261 283 1.4E-8 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 Pfam PF00582 Universal stress protein family 213 283 4.2E-10 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 Pfam PF00582 Universal stress protein family 2 157 6.4E-12 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 SUPERFAMILY SSF52402 165 283 7.28E-21 T 29-03-2018 AM474_RS01825 c42c9893c7b017a61b0f8b8f23808599 283 Gene3D G3DSA:3.40.50.620 161 283 1.8E-18 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 SMART SM00421 174 231 5.2E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 SUPERFAMILY SSF75516 9 160 2.62E-36 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 231 5.6E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 Gene3D G3DSA:3.30.450.80 1 173 5.3E-39 T 29-03-2018 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 Gene3D G3DSA:1.10.10.10 176 237 1.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 ProSitePatterns PS00622 LuxR-type HTH domain signature. 191 218 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 1.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 1.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 1.7E-5 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 Pfam PF03472 Autoinducer binding domain 18 158 8.1E-37 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS26270 997c6c9d59fff099b44ac00dcd232cd6 239 SUPERFAMILY SSF46894 170 237 7.82E-16 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS05490 16c891b14942ef63af778d83e5aa9465 312 PIRSF PIRSF026649 1 306 2.0E-105 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM474_RS05490 16c891b14942ef63af778d83e5aa9465 312 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 306 50.153 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM474_RS05490 16c891b14942ef63af778d83e5aa9465 312 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 306 1.3E-134 T 29-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 AM474_RS05490 16c891b14942ef63af778d83e5aa9465 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 297 5.3E-87 T 29-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 Gene3D G3DSA:3.30.9.10 161 311 3.7E-27 T 29-03-2018 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 SUPERFAMILY SSF51905 328 368 1.47E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 SUPERFAMILY SSF51905 4 222 1.47E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 Gene3D G3DSA:3.50.50.60 312 368 7.6E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 Gene3D G3DSA:3.50.50.60 2 88 1.3E-6 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 Pfam PF01266 FAD dependent oxidoreductase 5 366 6.8E-67 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS17125 6e929abf247b2d9a56fe3a6f69534e37 368 Gene3D G3DSA:3.30.9.10 89 160 1.0E-6 T 29-03-2018 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 SUPERFAMILY SSF55811 220 345 5.19E-24 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 SMART SM00478 39 190 8.4E-50 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Pfam PF14815 NUDIX domain 238 343 8.3E-22 T 29-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Gene3D G3DSA:3.90.79.10 230 354 7.2E-10 T 29-03-2018 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Gene3D G3DSA:1.10.1670.10 118 225 3.3E-33 T 29-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 SUPERFAMILY SSF48150 4 224 9.11E-75 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.8E-8 T 29-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 29-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 277 5.8E-110 T 29-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 168 1.1E-20 T 29-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM474_RS17115 9f4e18ec0cbafd2b27238227c456fd1b 355 Gene3D G3DSA:1.10.340.30 21 117 5.3E-33 T 29-03-2018 AM474_RS27340 1886ad9f5254ae0cddbafe65249d026d 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 562 3.8E-230 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM474_RS27340 1886ad9f5254ae0cddbafe65249d026d 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 35.453 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM474_RS27340 1886ad9f5254ae0cddbafe65249d026d 564 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 5.8E-245 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM474_RS27340 1886ad9f5254ae0cddbafe65249d026d 564 PIRSF PIRSF001294 1 564 1.0E-243 T 29-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SMART SM00267 414 585 9.9E-64 T 29-03-2018 IPR000160 GGDEF domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SUPERFAMILY SSF141868 600 844 3.79E-85 T 29-03-2018 IPR001633 EAL domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Gene3D G3DSA:3.30.70.270 419 592 1.8E-62 T 29-03-2018 AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Pfam PF00563 EAL domain 602 832 5.2E-67 T 29-03-2018 IPR001633 EAL domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Pfam PF05228 CHASE4 domain 59 219 2.3E-18 T 29-03-2018 IPR007892 CHASE4 AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Gene3D G3DSA:3.20.20.450 593 851 8.1E-94 T 29-03-2018 IPR001633 EAL domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SUPERFAMILY SSF55073 430 585 5.65E-49 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 300 420 4.0E-14 T 29-03-2018 IPR000014 PAS domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SUPERFAMILY SSF55785 291 412 6.28E-16 T 29-03-2018 IPR000014 PAS domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 581 1.4E-48 T 29-03-2018 IPR000160 GGDEF domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 Gene3D G3DSA:3.30.450.20 282 418 9.3E-22 T 29-03-2018 AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SMART SM00052 595 837 8.0E-106 T 29-03-2018 IPR001633 EAL domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 582 7.4E-44 T 29-03-2018 IPR000160 GGDEF domain AM474_RS29685 0082032147b7998ab4c81c811cce2032 864 SMART SM00091 303 371 7.2E-7 T 29-03-2018 IPR000014 PAS domain AM474_RS26485 aeb69e756c77e344690751ef0f2d1480 492 Pfam PF02120 Flagellar hook-length control protein FliK 398 478 4.4E-19 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AM474_RS27885 abfe5305a32bb6b2a268644207af9972 266 SMART SM00460 153 215 6.1E-16 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS27885 abfe5305a32bb6b2a268644207af9972 266 Gene3D G3DSA:3.90.260.10 135 244 1.7E-6 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS27885 abfe5305a32bb6b2a268644207af9972 266 SUPERFAMILY SSF54001 51 258 9.81E-48 T 29-03-2018 AM474_RS27885 abfe5305a32bb6b2a268644207af9972 266 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 7.5E-20 T 29-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AM474_RS27885 abfe5305a32bb6b2a268644207af9972 266 Pfam PF01841 Transglutaminase-like superfamily 111 212 1.0E-21 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS32070 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.10.60 1 62 5.6E-12 T 29-03-2018 AM474_RS32070 070842849ebf986bca6cbf2194bdbd6b 204 Gene3D G3DSA:1.10.357.10 63 195 9.2E-21 T 29-03-2018 AM474_RS32070 070842849ebf986bca6cbf2194bdbd6b 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.8E-6 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS32070 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF48498 81 195 4.79E-27 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS32070 070842849ebf986bca6cbf2194bdbd6b 204 SUPERFAMILY SSF46689 2 70 9.23E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS23985 82b9b080b196e4acb99459088951c36e 51 Pfam PF12773 Double zinc ribbon 3 47 7.0E-10 T 29-03-2018 IPR025874 Double zinc ribbon AM474_RS23985 82b9b080b196e4acb99459088951c36e 51 Gene3D G3DSA:2.20.28.20 28 51 0.027 T 29-03-2018 AM474_RS23985 82b9b080b196e4acb99459088951c36e 51 Gene3D G3DSA:2.20.28.20 2 27 0.0072 T 29-03-2018 AM474_RS29280 af168568cd284969e25daa83c7097c41 402 Hamap MF_01118 UPF0226 membrane protein . 7 398 30.909 T 29-03-2018 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily AM474_RS29280 af168568cd284969e25daa83c7097c41 402 Gene3D G3DSA:1.20.1250.20 224 401 2.4E-18 T 29-03-2018 AM474_RS29280 af168568cd284969e25daa83c7097c41 402 SUPERFAMILY SSF103473 22 400 1.96E-44 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29280 af168568cd284969e25daa83c7097c41 402 Gene3D G3DSA:1.20.1250.20 9 211 3.7E-15 T 29-03-2018 AM474_RS29280 af168568cd284969e25daa83c7097c41 402 Pfam PF07690 Major Facilitator Superfamily 230 399 1.7E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 130 140 1.1E-8 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 187 208 1.1E-8 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 PRINTS PR01374 Gram-negative bacterial tonB protein signature 208 226 1.1E-8 T 29-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 Gene3D G3DSA:3.30.1150.10 128 270 1.8E-25 T 29-03-2018 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 193 270 1.2E-25 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 SUPERFAMILY SSF74653 187 267 1.31E-24 T 29-03-2018 AM474_RS13775 67a9e226e804471510bc61f86f96ea65 270 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 191 269 6.1E-24 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 Pfam PF01979 Amidohydrolase family 50 436 1.8E-28 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51556 54 383 8.85E-109 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:3.20.20.140 281 424 1.8E-48 T 29-03-2018 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:3.20.20.140 69 280 2.2E-57 T 29-03-2018 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 Gene3D G3DSA:2.30.40.10 1 68 4.4E-20 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 455 4.6E-176 T 29-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51338 1 53 9.02E-34 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS12490 6ea532414df6139429e1b83a4b4466e6 479 SUPERFAMILY SSF51338 383 455 9.02E-34 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS16860 addba164ef90f94593049b4c45bde665 267 Gene3D G3DSA:1.20.144.10 3 237 3.0E-8 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS16860 addba164ef90f94593049b4c45bde665 267 SUPERFAMILY SSF48317 16 228 3.14E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS16860 addba164ef90f94593049b4c45bde665 267 Pfam PF01569 PAP2 superfamily 146 225 5.3E-13 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS25880 5dabaf4368ba8384dd6507a37ae9e89a 477 PIRSF PIRSF006603 15 468 5.2E-64 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS25880 5dabaf4368ba8384dd6507a37ae9e89a 477 Pfam PF01554 MatE 254 414 1.1E-34 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS25880 5dabaf4368ba8384dd6507a37ae9e89a 477 Pfam PF01554 MatE 27 186 3.8E-35 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS25880 5dabaf4368ba8384dd6507a37ae9e89a 477 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 432 3.4E-101 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS09030 960d763810cea5898289309926cda1a8 523 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 290 298 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS09030 960d763810cea5898289309926cda1a8 523 Pfam PF00270 DEAD/DEAH box helicase 159 334 2.9E-48 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS09030 960d763810cea5898289309926cda1a8 523 SMART SM00490 397 478 2.0E-32 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09030 960d763810cea5898289309926cda1a8 523 Gene3D G3DSA:3.40.50.300 79 364 7.1E-55 T 29-03-2018 AM474_RS09030 960d763810cea5898289309926cda1a8 523 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 134 516 53.172 T 29-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 AM474_RS09030 960d763810cea5898289309926cda1a8 523 Pfam PF00271 Helicase conserved C-terminal domain 369 478 9.8E-30 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09030 960d763810cea5898289309926cda1a8 523 Gene3D G3DSA:3.40.50.300 365 515 2.4E-43 T 29-03-2018 AM474_RS09030 960d763810cea5898289309926cda1a8 523 SUPERFAMILY SSF52540 210 494 1.97E-72 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09030 960d763810cea5898289309926cda1a8 523 SMART SM00487 154 361 4.8E-52 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 Gene3D G3DSA:2.40.160.50 176 565 1.1E-47 T 29-03-2018 AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 208 528 7.9E-98 T 29-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 Gene3D G3DSA:3.10.20.310 77 149 2.1E-18 T 29-03-2018 AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 Pfam PF17287 POTRA domain 161 203 4.4E-15 T 29-03-2018 IPR035251 ShlB, POTRA domain AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 Pfam PF08479 POTRA domain, ShlB-type 74 149 5.1E-27 T 29-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type AM474_RS31960 8f51957827ac9273cc1688fef83c4a10 565 PIRSF PIRSF029745 1 565 5.7E-152 T 29-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 AM474_RS07020 0b5cdcc02b10ebf1646773fb08375834 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.721 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AM474_RS07020 0b5cdcc02b10ebf1646773fb08375834 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 5.7E-90 T 29-03-2018 IPR005583 Peroxide stress protein YaaA AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 SUPERFAMILY SSF47240 1 154 1.74E-46 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PIRSF PIRSF002560 1 154 2.9E-63 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 Gene3D G3DSA:1.20.1260.10 2 151 1.1E-39 T 29-03-2018 IPR012347 Ferritin-related AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 85 105 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 128 149 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 23 43 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 3 22 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 106 126 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 PRINTS PR00601 Bacterioferritin signature 44 64 4.2E-42 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.1E-48 T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 29-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 AM474_RS11030 1bd2083a5bf30f99273964692f7c5415 154 Pfam PF00210 Ferritin-like domain 8 144 9.6E-38 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM474_RS12180 4cd3591911891e7fae7168b51a6dd956 274 Pfam PF08241 Methyltransferase domain 62 155 3.0E-24 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS12180 4cd3591911891e7fae7168b51a6dd956 274 Gene3D G3DSA:3.40.50.150 9 272 1.2E-36 T 29-03-2018 AM474_RS12180 4cd3591911891e7fae7168b51a6dd956 274 SUPERFAMILY SSF53335 24 272 1.53E-42 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS12180 4cd3591911891e7fae7168b51a6dd956 274 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 18 272 32.142 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM474_RS12180 4cd3591911891e7fae7168b51a6dd956 274 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 26 272 1.0E-69 T 29-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 Hamap MF_02074 Renalase. 1 327 62.512 T 29-03-2018 IPR034721 Bacterial renalase GO:0000166|GO:0016491 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 Gene3D G3DSA:3.90.660.10 58 286 6.8E-61 T 29-03-2018 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 68 2.1E-15 T 29-03-2018 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 Pfam PF01593 Flavin containing amine oxidoreductase 109 324 1.8E-10 T 29-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 Gene3D G3DSA:3.50.50.60 3 57 1.3E-4 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 SUPERFAMILY SSF51905 287 327 8.06E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20025 cde9f55d625e1161f70f5278951e45bc 327 SUPERFAMILY SSF51905 2 196 8.06E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 3.1E-55 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 Gene3D G3DSA:3.20.20.70 3 293 3.0E-84 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.8E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.8E-10 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 SMART SM01130 4 293 5.5E-99 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 PIRSF PIRSF001365 1 293 2.4E-86 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS13670 9c263ba9305610c1af963b4093860452 293 SUPERFAMILY SSF51569 3 292 2.09E-85 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Pfam PF13195 Protein of unknown function (DUF4011) 741 831 6.9E-10 T 29-03-2018 IPR025103 Protein of unknown function DUF4011 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 SUPERFAMILY SSF52540 952 1017 1.63E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 SUPERFAMILY SSF52540 1582 1678 1.63E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 SUPERFAMILY SSF52540 1723 1963 1.63E-31 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Pfam PF13087 AAA domain 1722 1916 4.8E-22 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Gene3D G3DSA:3.40.50.300 943 1686 5.4E-27 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Gene3D G3DSA:1.10.510.10 117 360 8.9E-28 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 SUPERFAMILY SSF56112 158 360 4.99E-31 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Pfam PF13086 AAA domain 952 1042 8.3E-7 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Gene3D G3DSA:3.40.50.300 1730 1940 1.7E-21 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 SMART SM00220 129 355 6.8E-9 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Gene3D G3DSA:3.40.960.10 1981 2097 5.2E-4 T 29-03-2018 AM474_RS01505 fca52636e5e9f73529b404a61aa11a95 2098 Pfam PF00069 Protein kinase domain 160 351 1.4E-18 T 29-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AM474_RS25550 971f40bf04eb2b57fd6c81c461bccfcb 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 312 4.7E-65 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS25550 971f40bf04eb2b57fd6c81c461bccfcb 318 SUPERFAMILY SSF161111 22 239 3.53E-50 T 29-03-2018 AM474_RS25550 971f40bf04eb2b57fd6c81c461bccfcb 318 Gene3D G3DSA:1.20.1510.10 22 238 6.4E-50 T 29-03-2018 AM474_RS25550 971f40bf04eb2b57fd6c81c461bccfcb 318 Pfam PF01545 Cation efflux family 30 238 1.2E-39 T 29-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM474_RS27265 36f2ef9c51fda26a287427823f8395d3 145 SUPERFAMILY SSF54637 13 139 8.13E-31 T 29-03-2018 IPR029069 HotDog domain AM474_RS27265 36f2ef9c51fda26a287427823f8395d3 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 9.0E-36 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS27265 36f2ef9c51fda26a287427823f8395d3 145 Gene3D G3DSA:3.10.129.10 1 144 3.5E-27 T 29-03-2018 AM474_RS27265 36f2ef9c51fda26a287427823f8395d3 145 Pfam PF03061 Thioesterase superfamily 51 126 6.2E-14 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS28375 abe099a3ec88295b27bb93624f0cbb9c 451 Pfam PF13520 Amino acid permease 13 410 5.5E-55 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS28375 abe099a3ec88295b27bb93624f0cbb9c 451 PIRSF PIRSF006060 2 450 5.9E-73 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 187 2.1E-13 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 9.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 9.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 9.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 9.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 9.1E-9 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 186 1.7E-13 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 SUPERFAMILY SSF56784 5 203 5.47E-43 T 29-03-2018 IPR023214 HAD-like domain AM474_RS16955 87f491f0212a58a8cde180f889e8a7fe 221 Gene3D G3DSA:3.40.50.1000 2 218 3.6E-27 T 29-03-2018 IPR023214 HAD-like domain AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.8E-10 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 Gene3D G3DSA:3.40.50.720 1 43 2.9E-8 T 29-03-2018 AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 Gene3D G3DSA:3.40.50.720 44 260 1.1E-54 T 29-03-2018 AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 SUPERFAMILY SSF51735 5 251 1.07E-74 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00335 de347ae651ae22403d8fb690e6a37dc4 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.1E-58 T 29-03-2018 AM474_RS12820 01c62b50ee3da7c115057ad704f4495d 243 SUPERFAMILY SSF53955 55 233 6.75E-57 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS12820 01c62b50ee3da7c115057ad704f4495d 243 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 12 235 44.666 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM474_RS12820 01c62b50ee3da7c115057ad704f4495d 243 Pfam PF00912 Transglycosylase 65 229 5.1E-46 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS12820 01c62b50ee3da7c115057ad704f4495d 243 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 15 234 3.3E-104 T 29-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 AM474_RS12820 01c62b50ee3da7c115057ad704f4495d 243 Gene3D G3DSA:1.10.3810.10 50 235 3.5E-51 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS09230 e19ad9805ac798c06f0cdb9847f7bf87 317 Pfam PF04773 FecR protein 113 204 1.0E-18 T 29-03-2018 IPR006860 FecR protein AM474_RS09230 e19ad9805ac798c06f0cdb9847f7bf87 317 Pfam PF16220 Domain of unknown function (DUF4880) 15 57 4.0E-13 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS09230 e19ad9805ac798c06f0cdb9847f7bf87 317 PIRSF PIRSF018266 4 316 1.4E-93 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS12785 2c7a4d26b2eb71e56fdb9636aa58354c 107 Pfam PF11872 Protein of unknown function (DUF3392) 5 106 4.7E-41 T 29-03-2018 IPR021813 Protein of unknown function DUF3392 AM474_RS19075 5a7d8a493c1edb3ef2c481969429629a 151 Pfam PF09980 Predicted membrane protein (DUF2214) 3 148 1.6E-53 T 29-03-2018 IPR018706 Protein of unknown function DUF2214, membrane AM474_RS17170 9c8b9575cbb7925b7c3f906d50873e52 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 3.4E-18 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17170 9c8b9575cbb7925b7c3f906d50873e52 250 SUPERFAMILY SSF53850 30 250 7.29E-35 T 29-03-2018 AM474_RS17170 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 22 130 1.7E-10 T 29-03-2018 AM474_RS17170 9c8b9575cbb7925b7c3f906d50873e52 250 Gene3D G3DSA:3.40.190.10 131 207 2.6E-8 T 29-03-2018 AM474_RS16920 fe30c157ead0170567a83653e93f6ef7 71 SUPERFAMILY SSF117130 3 67 1.2E-8 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS16920 fe30c157ead0170567a83653e93f6ef7 71 Pfam PF02599 Global regulator protein family 4 67 1.7E-10 T 29-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 AM474_RS30795 d0baa683609952d7e777ee23e64e3f90 441 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 284 1.3E-5 T 29-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 AM474_RS30795 d0baa683609952d7e777ee23e64e3f90 441 SUPERFAMILY SSF51445 42 357 2.82E-62 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30795 d0baa683609952d7e777ee23e64e3f90 441 Gene3D G3DSA:3.20.20.80 39 357 1.5E-40 T 29-03-2018 AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 PRINTS PR00332 Histidine triad family signature 30 48 6.4E-9 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 PRINTS PR00332 Histidine triad family signature 98 108 6.4E-9 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 PRINTS PR00332 Histidine triad family signature 9 25 6.4E-9 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 Pfam PF01230 HIT domain 18 112 2.5E-20 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 Gene3D G3DSA:3.30.428.10 3 153 7.6E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 SUPERFAMILY SSF54197 6 147 2.01E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS25595 5f5d1cfc833268881515261097d5f8cd 153 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 29-03-2018 IPR019808 Histidine triad, conserved site AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 Gene3D G3DSA:1.10.540.10 12 132 4.2E-11 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 Gene3D G3DSA:1.20.140.10 217 350 1.2E-32 T 29-03-2018 AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 219 357 5.1E-28 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 106 2.6E-7 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 SUPERFAMILY SSF47203 219 365 2.42E-35 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS23955 f96e09ba0af72af316f13cea8e78c0ea 370 SUPERFAMILY SSF56645 29 213 9.53E-15 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 SUPERFAMILY SSF56235 33 756 2.5E-184 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 Gene3D G3DSA:3.60.20.10 217 753 4.8E-108 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 Pfam PF01804 Penicillin amidase 33 750 1.1E-143 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 PIRSF PIRSF001227 10 153 6.6E-14 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 PIRSF PIRSF001227 177 759 1.4E-55 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AM474_RS31520 1b06b528a17040eeb89a781262498e1f 762 Gene3D G3DSA:1.10.439.10 24 192 1.0E-38 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 AM474_RS10120 0ccb61718424d55f29151e92e2f99165 171 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 1.7E-52 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM474_RS10120 0ccb61718424d55f29151e92e2f99165 171 SUPERFAMILY SSF101307 17 162 3.4E-46 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM474_RS10120 0ccb61718424d55f29151e92e2f99165 171 Gene3D G3DSA:1.10.3760.10 60 163 4.1E-37 T 29-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM474_RS10120 0ccb61718424d55f29151e92e2f99165 171 PIRSF PIRSF006162 14 169 3.4E-50 T 29-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 9 429 70.722 T 29-03-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 8 426 2.5E-196 T 29-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Pfam PF04209 homogentisate 1,2-dioxygenase 9 427 7.4E-213 T 29-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 SUPERFAMILY SSF51182 8 431 6.52E-160 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Gene3D G3DSA:2.60.120.10 275 397 3.6E-54 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS29360 b3c9f2aa649ae04f7fe72f64f1bea20d 432 Gene3D G3DSA:2.60.120.10 196 242 2.3E-8 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS04640 f7c00c62b205ca650228ba166ee24bae 266 Pfam PF10977 Protein of unknown function (DUF2797) 29 262 2.4E-98 T 29-03-2018 IPR021246 Protein of unknown function DUF2797 AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 330 1.3E-20 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.30.1220.10 226 332 3.0E-24 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 191 4.4E-52 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF52540 11 210 1.99E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 SMART SM00833 237 331 7.4E-16 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 SUPERFAMILY SSF90002 237 329 1.57E-25 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS20315 9f24c46a0f44d243223721a91179c484 334 Gene3D G3DSA:3.40.50.300 9 211 1.6E-41 T 29-03-2018 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 380 3.1E-20 T 29-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.20.140.10 231 404 1.0E-25 T 29-03-2018 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF56645 27 229 2.75E-48 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 128 1.6E-10 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:1.10.540.10 6 130 6.0E-17 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 PIRSF PIRSF016578 7 396 3.2E-30 T 29-03-2018 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 Gene3D G3DSA:2.40.110.10 131 230 1.3E-16 T 29-03-2018 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 SUPERFAMILY SSF47203 233 399 1.93E-26 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS31325 eebb2ba6588c893fb7582e64401fdfbf 405 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 15 404 3.2E-197 T 29-03-2018 IPR023922 Sulphate-starvation-induced SfnB AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 Gene3D G3DSA:2.60.120.10 1 181 0.0011 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 SUPERFAMILY SSF46689 219 266 2.37E-7 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 Pfam PF02311 AraC-like ligand binding domain 18 146 1.5E-27 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 SUPERFAMILY SSF46689 170 217 4.84E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 Gene3D G3DSA:1.10.10.60 182 223 5.1E-9 T 29-03-2018 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 SUPERFAMILY SSF51215 24 135 1.22E-21 T 29-03-2018 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 SMART SM00342 183 265 5.6E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 Gene3D G3DSA:1.10.10.60 224 270 1.4E-12 T 29-03-2018 AM474_RS32095 e90614df2d46bbc2a9a4dccbbd54f923 271 Pfam PF12833 Helix-turn-helix domain 189 266 2.8E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS23945 bb8c0c22d599691736765d7aec5d2821 451 Gene3D G3DSA:1.20.1250.20 13 212 1.9E-36 T 29-03-2018 AM474_RS23945 bb8c0c22d599691736765d7aec5d2821 451 Pfam PF07690 Major Facilitator Superfamily 27 380 4.8E-43 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS23945 bb8c0c22d599691736765d7aec5d2821 451 SUPERFAMILY SSF103473 11 414 4.32E-77 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS23945 bb8c0c22d599691736765d7aec5d2821 451 Gene3D G3DSA:1.20.1250.20 226 431 8.7E-27 T 29-03-2018 AM474_RS23945 bb8c0c22d599691736765d7aec5d2821 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS21855 c7d8dd913089596b803996baf4848ad1 371 Gene3D G3DSA:3.40.50.2000 9 186 7.9E-16 T 29-03-2018 AM474_RS21855 c7d8dd913089596b803996baf4848ad1 371 Gene3D G3DSA:3.40.50.2000 187 344 3.2E-35 T 29-03-2018 AM474_RS21855 c7d8dd913089596b803996baf4848ad1 371 Pfam PF00534 Glycosyl transferases group 1 188 331 3.2E-20 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS21855 c7d8dd913089596b803996baf4848ad1 371 SUPERFAMILY SSF53756 6 361 6.57E-64 T 29-03-2018 AM474_RS21855 c7d8dd913089596b803996baf4848ad1 371 Pfam PF13439 Glycosyltransferase Family 4 15 175 2.2E-21 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 163 5.5E-16 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 Gene3D G3DSA:1.10.10.10 71 168 1.4E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 Pfam PF08281 Sigma-70, region 4 110 162 5.6E-11 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 Gene3D G3DSA:1.10.1740.10 4 70 1.4E-11 T 29-03-2018 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 Pfam PF04542 Sigma-70 region 2 19 79 3.5E-13 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 SUPERFAMILY SSF88659 90 166 1.44E-12 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29565 c5d4ec78533c8005a7055a3e1e3258aa 168 SUPERFAMILY SSF88946 6 76 5.49E-11 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 Gene3D G3DSA:3.30.70.1530 26 93 2.6E-20 T 29-03-2018 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 Pfam PF01514 Secretory protein of YscJ/FliF family 12 190 1.8E-26 T 29-03-2018 IPR006182 Secretory protein YscJ/FliF AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 10 195 6.0E-73 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 80 93 6.8E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 28 38 6.8E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 169 181 6.8E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 120 133 6.8E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS27835 17f3c58f19c23a6885278a8a9af194f8 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 100 115 6.8E-30 T 29-03-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 AM474_RS28900 65564ab257badbbc6bf4719ed0382fb0 466 Gene3D G3DSA:3.50.50.60 23 460 1.3E-34 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28900 65564ab257badbbc6bf4719ed0382fb0 466 Pfam PF01266 FAD dependent oxidoreductase 35 396 2.0E-53 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS28900 65564ab257badbbc6bf4719ed0382fb0 466 SUPERFAMILY SSF51905 359 413 2.2E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS28900 65564ab257badbbc6bf4719ed0382fb0 466 SUPERFAMILY SSF51905 34 259 2.2E-40 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS02650 7fe89738ede104ab9cefbc960bc41e3f 202 Gene3D G3DSA:2.60.40.420 65 202 2.7E-25 T 29-03-2018 IPR008972 Cupredoxin AM474_RS02650 7fe89738ede104ab9cefbc960bc41e3f 202 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 68 201 2.0E-10 T 29-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 AM474_RS02650 7fe89738ede104ab9cefbc960bc41e3f 202 SUPERFAMILY SSF49503 66 201 4.84E-30 T 29-03-2018 IPR008972 Cupredoxin AM474_RS15925 63f41b237f993ff435f964faffe0973c 134 Gene3D G3DSA:3.10.129.10 3 133 5.2E-28 T 29-03-2018 AM474_RS15925 63f41b237f993ff435f964faffe0973c 134 Pfam PF03061 Thioesterase superfamily 29 103 1.0E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS15925 63f41b237f993ff435f964faffe0973c 134 SUPERFAMILY SSF54637 9 131 3.58E-32 T 29-03-2018 IPR029069 HotDog domain AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 Gene3D G3DSA:2.30.40.10 1 73 7.2E-18 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.828 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 SUPERFAMILY SSF51556 60 360 1.87E-85 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 SUPERFAMILY SSF51338 361 399 1.36E-28 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 SUPERFAMILY SSF51338 1 60 1.36E-28 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 394 2.9E-147 T 29-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 Gene3D G3DSA:3.20.20.140 74 359 3.3E-56 T 29-03-2018 AM474_RS17410 9b1c86e173c3011260e2d4f7bfb70cb0 402 Pfam PF01979 Amidohydrolase family 58 376 2.2E-19 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 SUPERFAMILY SSF51735 6 253 6.33E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.6E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 Gene3D G3DSA:3.40.50.720 44 263 1.7E-58 T 29-03-2018 AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 Gene3D G3DSA:3.40.50.720 1 43 2.5E-9 T 29-03-2018 AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 196 7.7E-4 T 29-03-2018 AM474_RS00620 0fb65d791a9127f4b0c51a941b5cb508 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 8.2E-63 T 29-03-2018 AM474_RS13320 b3ab6d0927e6e185836bd23a4f961517 392 Pfam PF01610 Transposase 270 387 3.0E-9 T 29-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain AM474_RS13320 b3ab6d0927e6e185836bd23a4f961517 392 Pfam PF00487 Fatty acid desaturase 11 214 1.5E-12 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF10150 Ribonuclease E/G family 115 389 5.5E-106 T 29-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 SUPERFAMILY SSF50249 39 118 1.94E-19 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 SMART SM00316 37 113 3.5E-10 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 Gene3D G3DSA:2.40.50.140 32 118 5.7E-30 T 29-03-2018 AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 Pfam PF00575 S1 RNA binding domain 38 100 6.1E-8 T 29-03-2018 IPR003029 S1 domain GO:0003676 AM474_RS21000 191ae1f88d11e97d6dab3eff5e629468 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 3.4E-160 T 29-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM474_RS21815 fa17e7ce5e78e60ae35a7cb6a5eb80a8 265 Pfam PF06271 RDD family 55 164 3.0E-20 T 29-03-2018 IPR010432 RDD AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 Pfam PF00593 TonB dependent receptor 240 718 7.8E-56 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 164 2.6E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 Gene3D G3DSA:2.170.130.10 23 170 1.6E-27 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 SUPERFAMILY SSF56935 35 721 1.44E-119 T 29-03-2018 AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 Gene3D G3DSA:2.40.170.20 171 721 9.7E-77 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS05640 a252c4cb24acc07439cdaad7cba9b3a8 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 721 2.4E-96 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 497 1.5E-166 T 29-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 SUPERFAMILY SSF49879 13 107 1.09E-21 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 Pfam PF00498 FHA domain 29 97 5.4E-15 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 Gene3D G3DSA:2.60.200.20 259 434 0.0024 T 29-03-2018 AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 SMART SM00240 27 78 6.5E-5 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM474_RS14390 6159f3d6a01368b9d00c2863aec65fbc 503 Gene3D G3DSA:2.60.200.20 3 110 6.1E-19 T 29-03-2018 AM474_RS14050 015bfbb4eece79b0c6dec4e1a21da4a9 172 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 145 1.3E-47 T 29-03-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 Reactome: R-HSA-74259 AM474_RS14050 015bfbb4eece79b0c6dec4e1a21da4a9 172 Gene3D G3DSA:3.40.50.450 1 171 5.8E-36 T 29-03-2018 AM474_RS14050 015bfbb4eece79b0c6dec4e1a21da4a9 172 SUPERFAMILY SSF52309 1 156 3.2E-44 T 29-03-2018 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 SUPERFAMILY SSF52172 4 123 4.13E-30 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 Gene3D G3DSA:3.40.50.2300 1 135 8.3E-29 T 29-03-2018 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 SUPERFAMILY SSF52172 140 265 3.27E-15 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 SMART SM00448 141 253 0.063 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 SMART SM00448 6 117 2.0E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 Pfam PF00072 Response regulator receiver domain 143 246 1.4E-7 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 Pfam PF00072 Response regulator receiver domain 8 114 7.9E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03590 44dd5c6999f124a5afa97ce90e82d44a 303 Gene3D G3DSA:3.40.50.2300 136 261 1.2E-13 T 29-03-2018 AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 SMART SM00347 32 133 8.1E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 SUPERFAMILY SSF46785 6 146 2.42E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 Pfam PF01047 MarR family 40 97 1.8E-16 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 Gene3D G3DSA:1.10.10.10 4 147 3.3E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.6E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS06695 43eb5ff7282b31e2f5972b53197866c1 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS07330 686f08b51b92080abbcccfce68ec14de 469 Gene3D G3DSA:1.20.1250.20 237 442 1.2E-12 T 29-03-2018 AM474_RS07330 686f08b51b92080abbcccfce68ec14de 469 Pfam PF00083 Sugar (and other) transporter 21 218 1.2E-17 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS07330 686f08b51b92080abbcccfce68ec14de 469 Gene3D G3DSA:1.20.1250.20 15 231 1.5E-20 T 29-03-2018 AM474_RS07330 686f08b51b92080abbcccfce68ec14de 469 SUPERFAMILY SSF103473 6 426 4.32E-53 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25070 4a9cd7c392d2f5801831513d25a54647 292 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 7 197 9.6E-31 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AM474_RS25070 4a9cd7c392d2f5801831513d25a54647 292 SUPERFAMILY SSF51197 5 215 3.94E-27 T 29-03-2018 AM474_RS25070 4a9cd7c392d2f5801831513d25a54647 292 Gene3D G3DSA:2.60.120.620 3 225 7.4E-22 T 29-03-2018 AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 SUPERFAMILY SSF47413 8 72 1.21E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 Gene3D G3DSA:1.10.260.40 2 75 2.3E-11 T 29-03-2018 AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 Gene3D G3DSA:2.10.109.10 121 250 1.4E-11 T 29-03-2018 AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 SUPERFAMILY SSF51306 113 247 8.89E-17 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 Pfam PF13560 Helix-turn-helix domain 12 65 3.7E-6 T 29-03-2018 AM474_RS02525 96f747e70e8d02ddd6f381655ee9d32c 266 SMART SM00530 15 69 1.1E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 Pfam PF01266 FAD dependent oxidoreductase 5 343 9.1E-57 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 Gene3D G3DSA:3.40.50.20 1 95 3.0E-6 T 29-03-2018 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 Gene3D G3DSA:3.30.9.10 158 304 9.2E-22 T 29-03-2018 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 SUPERFAMILY SSF54373 204 304 5.23E-12 T 29-03-2018 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 Gene3D G3DSA:3.30.9.10 96 155 2.1E-7 T 29-03-2018 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 SUPERFAMILY SSF51905 4 208 4.92E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25400 a8a2102b0c8ad8094b66c593ef2fea6a 371 SUPERFAMILY SSF51905 305 363 4.92E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS25440 ea099b99bf498d9aa72eb15c8c7e2d01 312 Pfam PF03186 CobD/Cbib protein 7 290 7.3E-96 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM474_RS25440 ea099b99bf498d9aa72eb15c8c7e2d01 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 108.25 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM474_RS25440 ea099b99bf498d9aa72eb15c8c7e2d01 312 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 305 9.4E-58 T 29-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 PRINTS PR00799 Aspartate aminotransferase signature 176 195 2.4E-34 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 PRINTS PR00799 Aspartate aminotransferase signature 274 299 2.4E-34 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 PRINTS PR00799 Aspartate aminotransferase signature 342 360 2.4E-34 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 PRINTS PR00799 Aspartate aminotransferase signature 207 219 2.4E-34 T 29-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 Gene3D G3DSA:3.90.1150.10 302 397 4.9E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 Pfam PF00155 Aminotransferase class I and II 29 393 1.0E-80 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 Gene3D G3DSA:3.40.640.10 77 300 2.9E-35 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 Gene3D G3DSA:3.90.1150.10 2 76 6.7E-15 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 29-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM474_RS23020 9ee63be2588698f80f31f101e3ebd4f9 399 SUPERFAMILY SSF53383 1 397 1.05E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 Pfam PF08281 Sigma-70, region 4 113 164 4.4E-16 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 SUPERFAMILY SSF88946 17 93 1.69E-13 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 Gene3D G3DSA:1.10.1740.10 3 93 5.4E-13 T 29-03-2018 AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 Pfam PF04542 Sigma-70 region 2 21 81 8.7E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 Gene3D G3DSA:1.10.10.10 94 174 2.3E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 SUPERFAMILY SSF88659 88 169 4.49E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS14030 5c16582b5f6b9f270257a190a6bdf11a 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 165 5.2E-25 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Gene3D G3DSA:2.120.10.90 501 752 3.5E-42 T 29-03-2018 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 29-03-2018 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 7.1E-132 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 SUPERFAMILY SSF56719 35 487 2.75E-155 T 29-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 689 2.9E-5 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 643 0.0061 T 29-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 SMART SM00434 15 465 3.8E-228 T 29-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 34.074 T 29-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Gene3D G3DSA:3.30.1360.40 242 335 8.3E-23 T 29-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Gene3D G3DSA:3.90.199.10 38 219 1.7E-73 T 29-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 SUPERFAMILY SSF101904 501 750 5.36E-53 T 29-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM474_RS18355 ad0456d5a8042522eade36a242e31eb2 754 Gene3D G3DSA:1.10.268.10 348 487 3.6E-43 T 29-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 SMART SM00100 29 144 2.1E-4 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 Gene3D G3DSA:3.40.50.450 149 305 2.4E-7 T 29-03-2018 AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 Pfam PF10137 Predicted nucleotide-binding protein containing TIR-like domain 160 278 4.9E-33 T 29-03-2018 IPR019302 Nucleotide-binding protein, predicted, TIR-like domain AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 Pfam PF00027 Cyclic nucleotide-binding domain 47 127 2.7E-12 T 29-03-2018 IPR000595 Cyclic nucleotide-binding domain AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 SUPERFAMILY SSF51206 33 151 1.96E-21 T 29-03-2018 IPR018490 Cyclic nucleotide-binding-like AM474_RS09565 520afefe4f50b474b5de38e312e24ac5 308 Gene3D G3DSA:2.60.120.10 32 148 6.1E-22 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 29-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 SMART SM00986 56 216 1.2E-38 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 Pfam PF03167 Uracil DNA glycosylase superfamily 60 215 6.2E-25 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 220 4.2E-84 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 SUPERFAMILY SSF52141 9 228 1.74E-95 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 Gene3D G3DSA:3.40.470.10 1 229 1.4E-107 T 29-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 41.576 T 29-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM474_RS22390 76152303a2129beeac0abc2bb3748ffa 231 SMART SM00987 56 216 1.2E-38 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Pfam PF00501 AMP-binding enzyme 83 522 9.5E-93 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.40.50.980 267 427 4.2E-39 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.8E-25 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 51.996 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 2.9E-22 T 29-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.30.300.30 518 650 6.0E-26 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 SUPERFAMILY SSF56801 17 642 1.28E-183 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:2.30.38.10 428 515 8.0E-11 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 Gene3D G3DSA:3.40.50.980 74 266 3.2E-53 T 29-03-2018 AM474_RS23115 f925e89b92c5135c43769afc4810874e 651 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 29-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AM474_RS12665 cc243581fe7fcac6c3b1e574010a0de6 135 SMART SM00448 8 121 6.9E-36 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12665 cc243581fe7fcac6c3b1e574010a0de6 135 Gene3D G3DSA:3.40.50.2300 1 132 2.4E-34 T 29-03-2018 AM474_RS12665 cc243581fe7fcac6c3b1e574010a0de6 135 SUPERFAMILY SSF52172 5 126 1.85E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS12665 cc243581fe7fcac6c3b1e574010a0de6 135 Pfam PF00072 Response regulator receiver domain 10 121 3.2E-25 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07395 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Gene3D G3DSA:1.10.3720.10 6 293 4.0E-42 T 29-03-2018 AM474_RS07395 3cc5ee2e82d95b21cf9aca9e47a67b12 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 286 9.8E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS07395 3cc5ee2e82d95b21cf9aca9e47a67b12 297 SUPERFAMILY SSF161098 4 283 1.44E-53 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS27700 67e3000b2deb2eb7da280b08459caa00 158 Pfam PF07321 Type III secretion protein YscO 3 151 3.6E-45 T 29-03-2018 IPR009929 Type III secretion sytem,YscO AM474_RS24875 048b0480ae2e7115b8684876e5e8beba 339 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 18 326 5.3E-120 T 29-03-2018 IPR020020 Luciferase-type oxidoreductase AM474_RS24875 048b0480ae2e7115b8684876e5e8beba 339 Pfam PF00296 Luciferase-like monooxygenase 31 227 7.1E-37 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS24875 048b0480ae2e7115b8684876e5e8beba 339 Gene3D G3DSA:3.20.20.30 8 329 2.9E-55 T 29-03-2018 AM474_RS24875 048b0480ae2e7115b8684876e5e8beba 339 SUPERFAMILY SSF51679 28 326 9.86E-56 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS01590 47f512899d899af8ffb126d92e43a1ff 459 Pfam PF02481 DNA recombination-mediator protein A 92 294 1.9E-35 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM474_RS01590 47f512899d899af8ffb126d92e43a1ff 459 Gene3D G3DSA:3.40.50.450 131 331 5.3E-25 T 29-03-2018 AM474_RS01590 47f512899d899af8ffb126d92e43a1ff 459 Gene3D G3DSA:1.10.10.10 398 456 2.7E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01590 47f512899d899af8ffb126d92e43a1ff 459 SUPERFAMILY SSF102405 102 302 6.07E-30 T 29-03-2018 AM474_RS29715 7e8fe7d5c63acdff12738888e65526e4 624 Gene3D G3DSA:1.10.760.10 329 624 3.3E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29715 7e8fe7d5c63acdff12738888e65526e4 624 SUPERFAMILY SSF46626 518 562 2.87E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29715 7e8fe7d5c63acdff12738888e65526e4 624 SUPERFAMILY SSF46626 344 365 2.87E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29715 7e8fe7d5c63acdff12738888e65526e4 624 SUPERFAMILY SSF46626 605 624 2.87E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29715 7e8fe7d5c63acdff12738888e65526e4 624 Gene3D G3DSA:1.10.760.10 93 257 0.55 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 12 122 8.24E-24 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14841 FliG middle domain 120 193 5.0E-24 T 29-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 336 2.3E-102 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 SUPERFAMILY SSF48029 119 330 2.49E-69 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 200 338 8.5E-35 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 78 194 4.6E-19 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Gene3D G3DSA:1.10.220.30 2 77 7.8E-11 T 29-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 3.6E-65 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 PIRSF PIRSF003161 5 338 4.3E-118 T 29-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF01706 FliG C-terminal domain 223 329 5.2E-41 T 29-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal AM474_RS24415 088b736bb2473edf83917cc158a2e0b6 338 Pfam PF14842 FliG N-terminal domain 9 108 1.1E-33 T 29-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SUPERFAMILY SSF56024 631 693 8.75E-16 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SUPERFAMILY SSF56024 372 508 8.75E-16 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SUPERFAMILY SSF56024 22 114 3.14E-27 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SUPERFAMILY SSF56024 235 258 3.14E-27 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SUPERFAMILY SSF56024 296 394 3.14E-27 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 Gene3D G3DSA:3.30.870.10 27 381 2.7E-30 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 Gene3D G3DSA:3.30.870.10 382 714 1.5E-27 T 29-03-2018 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SMART SM00155 300 331 7.0 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS17425 d1e0d18972cd835f81e65d780e2333ea 745 SMART SM00155 637 664 0.009 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS17175 70394b6f889b7968cce56619dac237e9 251 SUPERFAMILY SSF53850 30 250 5.25E-36 T 29-03-2018 AM474_RS17175 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 176 251 0.017 T 29-03-2018 AM474_RS17175 70394b6f889b7968cce56619dac237e9 251 Gene3D G3DSA:3.40.190.10 21 175 1.5E-16 T 29-03-2018 AM474_RS17175 70394b6f889b7968cce56619dac237e9 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 250 3.3E-19 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17175 70394b6f889b7968cce56619dac237e9 251 SMART SM00062 29 251 0.0032 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS29905 a6917d19577f2cbd0891322f3310640b 80 Pfam PF10976 Protein of unknown function (DUF2790) 22 78 8.2E-19 T 29-03-2018 IPR021245 Protein of unknown function DUF2790 AM474_RS22405 8e4f0251b779aeb0feec4adbb4d9598e 156 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 147 2.7E-18 T 29-03-2018 IPR009936 Protein of unknown function DUF1468 AM474_RS22405 8e4f0251b779aeb0feec4adbb4d9598e 156 Gene3D G3DSA:1.20.1250.20 3 153 8.0E-4 T 29-03-2018 AM474_RS17460 1f4d1b22dc03b836f3f061e29a2dde44 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 268 2.6E-50 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17460 1f4d1b22dc03b836f3f061e29a2dde44 299 SMART SM00062 37 270 3.0E-65 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17460 1f4d1b22dc03b836f3f061e29a2dde44 299 Gene3D G3DSA:3.40.190.10 167 299 1.5E-17 T 29-03-2018 AM474_RS17460 1f4d1b22dc03b836f3f061e29a2dde44 299 SUPERFAMILY SSF53850 1 271 1.76E-65 T 29-03-2018 AM474_RS17460 1f4d1b22dc03b836f3f061e29a2dde44 299 Gene3D G3DSA:3.40.190.10 1 166 9.0E-30 T 29-03-2018 AM474_RS05460 d58c3469e1ba20666a23035820e481e8 285 Gene3D G3DSA:3.40.190.10 22 125 1.3E-14 T 29-03-2018 AM474_RS05460 d58c3469e1ba20666a23035820e481e8 285 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 274 4.9E-61 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS05460 d58c3469e1ba20666a23035820e481e8 285 Gene3D G3DSA:3.40.190.100 126 235 4.0E-35 T 29-03-2018 AM474_RS05460 d58c3469e1ba20666a23035820e481e8 285 SUPERFAMILY SSF53850 23 284 2.61E-74 T 29-03-2018 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 SMART SM00283 395 656 3.1E-60 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 Gene3D G3DSA:1.10.287.950 425 621 1.7E-49 T 29-03-2018 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 167 182 8.0E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 520 8.0E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 8.0E-22 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 SUPERFAMILY SSF58104 358 657 2.62E-66 T 29-03-2018 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 469 622 3.4E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS18990 7390e301e1c04b3d4710cb0e81f8fb7d 657 Gene3D G3DSA:1.10.287.950 165 424 5.7E-8 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Gene3D G3DSA:3.30.300.30 439 545 3.4E-23 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Gene3D G3DSA:3.40.50.980 201 355 1.6E-36 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Gene3D G3DSA:2.30.38.10 356 438 1.8E-23 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 SUPERFAMILY SSF56801 21 541 6.54E-134 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Gene3D G3DSA:3.40.50.980 33 200 1.1E-30 T 29-03-2018 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Pfam PF00501 AMP-binding enzyme 41 445 2.7E-86 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS10995 4394cfdb429fabb04c6f298e7f5dff09 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 3.7E-15 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS15930 c6bab9b1952d31a54654f03d6638333a 438 Gene3D G3DSA:1.20.1250.20 20 235 2.2E-24 T 29-03-2018 AM474_RS15930 c6bab9b1952d31a54654f03d6638333a 438 Gene3D G3DSA:1.20.1250.20 238 436 1.1E-17 T 29-03-2018 AM474_RS15930 c6bab9b1952d31a54654f03d6638333a 438 Pfam PF00083 Sugar (and other) transporter 27 237 2.2E-20 T 29-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM474_RS15930 c6bab9b1952d31a54654f03d6638333a 438 SUPERFAMILY SSF103473 7 426 1.96E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS18865 8241d0574b5cdd65aace6ac6eed4c670 437 Gene3D G3DSA:3.40.50.300 1 355 3.4E-20 T 29-03-2018 AM474_RS18865 8241d0574b5cdd65aace6ac6eed4c670 437 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 37 329 9.3E-13 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS18865 8241d0574b5cdd65aace6ac6eed4c670 437 SUPERFAMILY SSF52540 240 337 3.47E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18865 8241d0574b5cdd65aace6ac6eed4c670 437 SUPERFAMILY SSF52540 1 138 3.47E-19 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03975 a6022e03fd65f7b44db48c5c4c586f9e 210 Pfam PF16105 Domain of unknown function (DUF4823) 52 199 2.0E-59 T 29-03-2018 IPR032248 Protein of unknown function DUF4823 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF03448 MgtE intracellular N domain 64 165 1.5E-25 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00924 64 167 1.3E-35 T 29-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 TIGRFAM TIGR00400 mgtE: magnesium transporter 44 481 3.5E-85 T 29-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF161093 308 481 5.49E-48 T 29-03-2018 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.25.60.10 30 155 5.3E-19 T 29-03-2018 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF54631 167 305 6.6E-29 T 29-03-2018 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 238 286 6.4E-5 T 29-03-2018 IPR000644 CBS domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SMART SM00116 174 227 2.7 T 29-03-2018 IPR000644 CBS domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:1.10.357.20 307 482 3.6E-38 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF01769 Divalent cation transporter 351 474 1.6E-26 T 29-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 SUPERFAMILY SSF158791 41 164 2.22E-28 T 29-03-2018 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 233 285 8.9E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Pfam PF00571 CBS domain 167 223 5.4E-4 T 29-03-2018 IPR000644 CBS domain AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:3.10.580.10 156 216 1.9E-7 T 29-03-2018 AM474_RS23260 d5faef30d783b38cd1652e60568cfe4a 482 Gene3D G3DSA:3.10.580.10 217 289 5.7E-11 T 29-03-2018 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 Gene3D G3DSA:3.40.50.300 292 567 7.7E-64 T 29-03-2018 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 Pfam PF00437 Type II/IV secretion system protein 191 458 4.8E-93 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 SUPERFAMILY SSF52540 178 565 9.3E-100 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 9 567 7.4E-258 T 29-03-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 Gene3D G3DSA:3.30.450.90 165 291 1.3E-46 T 29-03-2018 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 SUPERFAMILY SSF160246 3 144 1.05E-33 T 29-03-2018 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 145 9.7E-13 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AM474_RS20740 16f880ff65b777d2eaf4db4671cf580d 567 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 386 400 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS06375 a195eccf3e3de5067f81a29ccf4dc601 377 Pfam PF12698 ABC-2 family transporter protein 22 361 5.1E-28 T 29-03-2018 AM474_RS06375 a195eccf3e3de5067f81a29ccf4dc601 377 Gene3D G3DSA:3.40.1710.10 34 194 1.9E-27 T 29-03-2018 AM474_RS11970 543f0ccd54770ddd9f37dca6f31c3048 139 Pfam PF06476 Protein of unknown function (DUF1090) 26 128 1.9E-34 T 29-03-2018 IPR009468 Protein of unknown function DUF1090 AM474_RS11970 543f0ccd54770ddd9f37dca6f31c3048 139 Gene3D G3DSA:1.10.287.620 33 139 2.8E-4 T 29-03-2018 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 Gene3D G3DSA:1.10.1740.10 2 74 1.5E-16 T 29-03-2018 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 Pfam PF08281 Sigma-70, region 4 115 165 5.2E-16 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 Gene3D G3DSA:1.10.10.10 75 172 2.3E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 SUPERFAMILY SSF88946 10 91 2.83E-15 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 169 1.1E-27 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 Pfam PF04542 Sigma-70 region 2 13 78 6.9E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25565 eda4e0b4318b6d4c60223ea3587565dd 175 SUPERFAMILY SSF88659 96 170 6.98E-16 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS20005 493af5a9a733defef804ddba05a91153 173 PIRSF PIRSF029681 1 173 1.2E-53 T 29-03-2018 IPR018550 Lipid A 3-O-deacylase-related AM474_RS20005 493af5a9a733defef804ddba05a91153 173 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 37 171 1.8E-41 T 29-03-2018 IPR018550 Lipid A 3-O-deacylase-related AM474_RS20005 493af5a9a733defef804ddba05a91153 173 Gene3D G3DSA:2.40.160.20 24 173 2.0E-40 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS20005 493af5a9a733defef804ddba05a91153 173 SUPERFAMILY SSF56925 33 148 8.89E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS07030 00ce29ceed5634a4894ee576c5a57a0d 494 SUPERFAMILY SSF53448 286 363 8.44E-12 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07030 00ce29ceed5634a4894ee576c5a57a0d 494 SUPERFAMILY SSF53448 151 255 8.44E-12 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07030 00ce29ceed5634a4894ee576c5a57a0d 494 Pfam PF13641 Glycosyltransferase like family 2 87 343 6.4E-54 T 29-03-2018 AM474_RS07030 00ce29ceed5634a4894ee576c5a57a0d 494 ProDom PD339107 ALGINATE ALG8 BIOSYNTHESIS TRANSFERASE TRANSMEMBRANE MEMBRANE 2.4.1.- GLYCOSYL GLYCOSYLTRANSFERASE PRECURSOR 2 494 0.0 T 29-03-2018 AM474_RS07030 00ce29ceed5634a4894ee576c5a57a0d 494 Gene3D G3DSA:3.90.550.10 76 360 3.8E-11 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 316 7.3E-21 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 SMART SM00729 49 261 4.8E-39 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 TIGRFAM TIGR00433 bioB: biotin synthase 21 316 7.6E-125 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 Hamap MF_01694 Biotin synthase [bioB]. 11 319 41.929 T 29-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 Gene3D G3DSA:3.20.20.70 10 321 3.3E-58 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 SMART SM00876 226 318 3.6E-48 T 29-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 Pfam PF04055 Radical SAM superfamily 56 207 5.1E-14 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 PIRSF PIRSF001619 1 325 2.2E-136 T 29-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM474_RS12195 b80333ed14b3179eafbefd1f494f7451 352 SUPERFAMILY SSF102114 11 320 9.94E-92 T 29-03-2018 AM474_RS08225 53b3ce7e243584f869ba9db51f8d6b0b 80 Pfam PF10038 Protein of unknown function (DUF2274) 5 69 9.8E-28 T 29-03-2018 IPR018733 Protein of unknown function DUF2274 AM474_RS27740 71ae2168876ff05ddbc76cda69aaa7d0 144 Pfam PF09621 Type III secretion system regulator (LcrR) 3 140 7.5E-71 T 29-03-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 AM474_RS27740 71ae2168876ff05ddbc76cda69aaa7d0 144 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 3 140 7.0E-72 T 29-03-2018 IPR013405 Type III secretion system regulator, LcrR AM474_RS24950 9e651527a7c5f9e76fda95e6fdd4ff13 472 Pfam PF13520 Amino acid permease 9 412 3.1E-61 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS24950 9e651527a7c5f9e76fda95e6fdd4ff13 472 PIRSF PIRSF006060 1 470 1.0E-44 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS24950 9e651527a7c5f9e76fda95e6fdd4ff13 472 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 472 8.7E-153 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM474_RS05425 91264fa1e0ce4773b3b01232099adec6 88 Pfam PF10976 Protein of unknown function (DUF2790) 11 85 3.6E-26 T 29-03-2018 IPR021245 Protein of unknown function DUF2790 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 SUPERFAMILY SSF54373 219 306 8.11E-21 T 29-03-2018 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 Gene3D G3DSA:3.30.9.10 176 303 3.4E-37 T 29-03-2018 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 SUPERFAMILY SSF51905 306 360 3.3E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 SUPERFAMILY SSF51905 4 219 3.3E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 Pfam PF01266 FAD dependent oxidoreductase 4 345 5.6E-70 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 Gene3D G3DSA:3.50.50.60 1 175 5.4E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20605 79d052775bf14973ad2adb77745127c9 364 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 349 1.3E-82 T 29-03-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 AM474_RS26145 85142116d6890fdb173af97db2358658 533 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 324 4.0E-27 T 29-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AM474_RS26145 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52518 2 180 2.54E-53 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS26145 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52518 361 528 1.2E-44 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS26145 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.970 1 192 5.6E-51 T 29-03-2018 AM474_RS26145 85142116d6890fdb173af97db2358658 533 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 29-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AM474_RS26145 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.970 350 527 6.4E-31 T 29-03-2018 AM474_RS26145 85142116d6890fdb173af97db2358658 533 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 7.6E-55 T 29-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AM474_RS26145 85142116d6890fdb173af97db2358658 533 SUPERFAMILY SSF52467 156 348 1.19E-37 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS26145 85142116d6890fdb173af97db2358658 533 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 525 1.3E-33 T 29-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AM474_RS26145 85142116d6890fdb173af97db2358658 533 Gene3D G3DSA:3.40.50.1220 193 349 1.6E-32 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS13940 83727f1e27edb5fa68df23a8d66a6f53 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS13940 83727f1e27edb5fa68df23a8d66a6f53 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 441 7.4E-112 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS13940 83727f1e27edb5fa68df23a8d66a6f53 468 Pfam PF00860 Permease family 25 410 8.7E-85 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS13940 83727f1e27edb5fa68df23a8d66a6f53 468 TIGRFAM TIGR03173 pbuX: xanthine permease 28 443 4.1E-128 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM474_RS19250 237f57c3b34e10529ac058b9980fe45e 125 Pfam PF02635 DsrE/DsrF-like family 9 124 1.3E-15 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM474_RS19250 237f57c3b34e10529ac058b9980fe45e 125 Gene3D G3DSA:3.40.1260.10 4 125 2.9E-22 T 29-03-2018 AM474_RS19250 237f57c3b34e10529ac058b9980fe45e 125 SUPERFAMILY SSF75169 10 125 5.38E-16 T 29-03-2018 IPR027396 DsrEFH-like AM474_RS17415 f4c8da60c37ccf053b4eadb258409f7b 266 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 1.2E-122 T 29-03-2018 IPR010247 N-formylglutamate deformylase AM474_RS17415 f4c8da60c37ccf053b4eadb258409f7b 266 Pfam PF05013 N-formylglutamate amidohydrolase 13 230 3.6E-71 T 29-03-2018 IPR007709 N-formylglutamate amidohydrolase AM474_RS17415 f4c8da60c37ccf053b4eadb258409f7b 266 SUPERFAMILY SSF53187 5 263 8.16E-82 T 29-03-2018 AM474_RS17415 f4c8da60c37ccf053b4eadb258409f7b 266 Gene3D G3DSA:3.40.630.40 2 265 4.6E-80 T 29-03-2018 AM474_RS27615 7424785b954314c9798b04c623570107 327 Pfam PF12146 Serine aminopeptidase, S33 83 170 2.1E-10 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS27615 7424785b954314c9798b04c623570107 327 SUPERFAMILY SSF53474 237 296 9.64E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27615 7424785b954314c9798b04c623570107 327 SUPERFAMILY SSF53474 29 176 9.64E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27615 7424785b954314c9798b04c623570107 327 Gene3D G3DSA:3.40.50.1820 46 326 3.4E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS00130 73a1cea46acacaf1540ea6ce617c9c0b 395 Gene3D G3DSA:3.50.50.60 124 261 3.9E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00130 73a1cea46acacaf1540ea6ce617c9c0b 395 SUPERFAMILY SSF51905 2 149 1.83E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00130 73a1cea46acacaf1540ea6ce617c9c0b 395 Gene3D G3DSA:3.40.50.720 1 123 4.3E-8 T 29-03-2018 AM474_RS00130 73a1cea46acacaf1540ea6ce617c9c0b 395 SUPERFAMILY SSF51905 119 261 1.01E-22 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS00130 73a1cea46acacaf1540ea6ce617c9c0b 395 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 137 1.1E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18155 aca36800d4fdb262b77e40eab94366e6 298 Pfam PF07395 Mig-14 35 298 9.2E-144 T 29-03-2018 IPR009977 Mig-14 AM474_RS18155 aca36800d4fdb262b77e40eab94366e6 298 Gene3D G3DSA:3.40.630.30 132 296 5.1E-19 T 29-03-2018 AM474_RS18155 aca36800d4fdb262b77e40eab94366e6 298 SUPERFAMILY SSF55729 138 290 1.32E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS18155 aca36800d4fdb262b77e40eab94366e6 298 PIRSF PIRSF029703 1 298 1.4E-134 T 29-03-2018 IPR009977 Mig-14 AM474_RS00085 9738b28e97a678a5fc5d0acbe4d9d07c 230 Pfam PF02308 MgtC family 9 129 1.0E-32 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS00085 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 84 108 3.9E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS00085 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 12 31 3.9E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS00085 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 57 79 3.9E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS00085 9738b28e97a678a5fc5d0acbe4d9d07c 230 PRINTS PR01837 MgtC/SapB protein signature 31 49 3.9E-41 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS00990 639fd08f8453096e171b4f9149e9f7bd 389 Gene3D G3DSA:2.60.120.650 7 216 4.5E-32 T 29-03-2018 AM474_RS00990 639fd08f8453096e171b4f9149e9f7bd 389 SMART SM00558 101 225 5.9E-5 T 29-03-2018 IPR003347 JmjC domain AM474_RS00990 639fd08f8453096e171b4f9149e9f7bd 389 SUPERFAMILY SSF51197 6 300 1.0E-78 T 29-03-2018 AM474_RS00990 639fd08f8453096e171b4f9149e9f7bd 389 Pfam PF08007 Cupin superfamily protein 16 319 4.2E-106 T 29-03-2018 IPR003347 JmjC domain AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 Gene3D G3DSA:1.10.760.10 187 313 1.7E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 Gene3D G3DSA:1.10.760.10 322 427 1.6E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 Gene3D G3DSA:1.10.760.10 24 160 4.1E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 SUPERFAMILY SSF46626 327 419 2.91E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 327 407 9.1E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 PIRSF PIRSF000018 14 433 1.6E-137 T 29-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 Pfam PF00034 Cytochrome c 47 146 2.9E-5 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 SUPERFAMILY SSF46626 190 296 1.34E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS27175 e2b55984d8b05a010f60761ca34709c2 433 SUPERFAMILY SSF46626 38 168 3.68E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12590 8408a7e66db378749f056b80172fee00 189 Pfam PF01292 Prokaryotic cytochrome b561 9 180 1.3E-31 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS12590 8408a7e66db378749f056b80172fee00 189 Gene3D G3DSA:1.20.950.20 1 188 1.8E-37 T 29-03-2018 AM474_RS12590 8408a7e66db378749f056b80172fee00 189 SUPERFAMILY SSF81342 4 181 4.55E-42 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS01650 61f019621c30590b5f46d11fa9d2eb67 287 Gene3D G3DSA:3.40.50.1820 6 278 6.4E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01650 61f019621c30590b5f46d11fa9d2eb67 287 Pfam PF12697 Alpha/beta hydrolase family 26 268 4.6E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS01650 61f019621c30590b5f46d11fa9d2eb67 287 SUPERFAMILY SSF53474 7 277 2.43E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS22800 3728ada6a85883f3332c6ff9581d866e 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 45 87 1.8E-9 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS22800 3728ada6a85883f3332c6ff9581d866e 227 Gene3D G3DSA:1.10.357.10 38 221 8.8E-23 T 29-03-2018 AM474_RS22800 3728ada6a85883f3332c6ff9581d866e 227 SUPERFAMILY SSF46689 39 99 1.85E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00815 68fba3041c8270a389e7892887443edf 328 Pfam PF09084 NMT1/THI5 like 64 242 5.1E-18 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS00815 68fba3041c8270a389e7892887443edf 328 SMART SM00062 28 240 8.0E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS00815 68fba3041c8270a389e7892887443edf 328 Gene3D G3DSA:3.40.190.10 125 312 9.0E-32 T 29-03-2018 AM474_RS00815 68fba3041c8270a389e7892887443edf 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 29 309 2.4E-95 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS00815 68fba3041c8270a389e7892887443edf 328 SUPERFAMILY SSF53850 39 254 1.85E-46 T 29-03-2018 AM474_RS00815 68fba3041c8270a389e7892887443edf 328 Gene3D G3DSA:3.40.190.10 23 124 5.7E-13 T 29-03-2018 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PIRSF PIRSF019574 1 354 3.7E-99 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 86 99 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 43 64 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 70 84 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 1.1E-40 T 29-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 Gene3D G3DSA:3.40.190.10 22 353 7.5E-46 T 29-03-2018 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 Pfam PF13416 Bacterial extracellular solute-binding protein 38 318 1.4E-30 T 29-03-2018 AM474_RS07405 4fab515811f13d6a11415135c2a2c099 354 SUPERFAMILY SSF53850 22 352 2.17E-83 T 29-03-2018 AM474_RS08430 644d6271b86c14077fdbe4d443c84ca1 277 Gene3D G3DSA:1.10.10.10 40 158 2.6E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08430 644d6271b86c14077fdbe4d443c84ca1 277 Pfam PF10134 Replication initiator protein A 24 253 5.8E-92 T 29-03-2018 IPR018777 Replication initiator protein A AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 10 440 1.2E-239 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 Gene3D G3DSA:3.40.50.1100 252 443 1.4E-26 T 29-03-2018 AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 109 123 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 398 4.0E-57 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 SUPERFAMILY SSF53686 98 440 2.33E-54 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 Gene3D G3DSA:3.40.50.1100 75 251 3.2E-26 T 29-03-2018 AM474_RS06125 02041b57a15972fc2397058b7c7c25cf 448 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 448 258.544 T 29-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 SMART SM00244 21 178 4.5E-63 T 29-03-2018 IPR001107 Band 7 domain AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 198 221 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 154 172 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 28 50 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 110 127 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 173 194 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 75 96 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 PRINTS PR00721 Stomatin signature 130 153 1.7E-60 T 29-03-2018 IPR001972 Stomatin family GO:0016020 AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 Pfam PF01145 SPFH domain / Band 7 family 26 194 2.0E-34 T 29-03-2018 IPR001107 Band 7 domain AM474_RS12435 19f0947abcb7652be0159e6833b18290 264 SUPERFAMILY SSF117892 52 185 3.53E-43 T 29-03-2018 IPR001107 Band 7 domain AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 Gene3D G3DSA:3.40.50.620 154 303 3.2E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 SUPERFAMILY SSF52402 1 147 2.18E-22 T 29-03-2018 AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 Pfam PF00582 Universal stress protein family 4 145 1.1E-14 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 Pfam PF00582 Universal stress protein family 177 299 2.5E-15 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 SUPERFAMILY SSF52402 163 300 3.77E-15 T 29-03-2018 AM474_RS21765 4bf301fa38b15b6e04c6815b800439e7 304 Gene3D G3DSA:3.40.50.620 1 153 2.9E-19 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21125 aa9037045a395ff1f8132f3d9898f15a 102 SUPERFAMILY SSF52091 7 100 1.9E-16 T 29-03-2018 IPR002645 STAS domain AM474_RS21125 aa9037045a395ff1f8132f3d9898f15a 102 Pfam PF13466 STAS domain 14 94 2.2E-16 T 29-03-2018 IPR002645 STAS domain AM474_RS21125 aa9037045a395ff1f8132f3d9898f15a 102 Gene3D G3DSA:3.30.750.24 13 102 7.2E-10 T 29-03-2018 IPR002645 STAS domain AM474_RS01300 0d34f66ad6f72d01fc4390e366a3e84c 304 Gene3D G3DSA:3.40.50.1820 35 301 2.1E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01300 0d34f66ad6f72d01fc4390e366a3e84c 304 SUPERFAMILY SSF53474 39 293 3.13E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01300 0d34f66ad6f72d01fc4390e366a3e84c 304 Pfam PF00756 Putative esterase 62 212 1.1E-12 T 29-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 SUPERFAMILY SSF64153 14 251 1.31E-59 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 215 22.674 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Gene3D G3DSA:3.40.1190.20 228 498 1.5E-51 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 SUPERFAMILY SSF53613 233 495 2.95E-72 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Gene3D G3DSA:3.40.50.10260 1 227 1.8E-59 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Pfam PF01256 Carbohydrate kinase 252 487 1.2E-59 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 16 213 2.7E-41 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 494 1.7E-65 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 499 21.231 T 29-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 Pfam PF03853 YjeF-related protein N-terminus 36 194 1.3E-39 T 29-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM474_RS18435 cac786f33f0df86240fdca092a2a3bd0 502 PIRSF PIRSF017184 12 498 1.5E-127 T 29-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM474_RS22885 95ddd7c40ee024a3abd9e3d37e7a2fb9 730 Gene3D G3DSA:3.40.720.10 134 440 1.2E-20 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS22885 95ddd7c40ee024a3abd9e3d37e7a2fb9 730 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 8 725 3.4E-273 T 29-03-2018 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS22885 95ddd7c40ee024a3abd9e3d37e7a2fb9 730 Pfam PF04185 Phosphoesterase family 51 436 6.6E-125 T 29-03-2018 IPR007312 Phosphoesterase GO:0016788 AM474_RS22885 95ddd7c40ee024a3abd9e3d37e7a2fb9 730 Pfam PF05506 Domain of unknown function (DUF756) 512 619 1.5E-14 T 29-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS22885 95ddd7c40ee024a3abd9e3d37e7a2fb9 730 Pfam PF05506 Domain of unknown function (DUF756) 629 712 1.2E-17 T 29-03-2018 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 Gene3D G3DSA:3.90.470.20 51 135 2.0E-11 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 SUPERFAMILY SSF56214 123 221 5.41E-13 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 PRINTS PR01399 Enterobactin synthetase component D signature 91 109 6.8E-18 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 PRINTS PR01399 Enterobactin synthetase component D signature 169 185 6.8E-18 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 PRINTS PR01399 Enterobactin synthetase component D signature 61 81 6.8E-18 T 29-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 Gene3D G3DSA:3.90.470.20 136 240 6.7E-8 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM474_RS24765 c7f5c74242d00b8892a05441ffa619e2 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 125 220 2.9E-9 T 29-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 Gene3D G3DSA:3.30.590.10 102 443 6.5E-89 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 Pfam PF16952 Glutamine synthetase N-terminal domain 3 104 1.3E-44 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 Pfam PF00120 Glutamine synthetase, catalytic domain 106 426 4.9E-87 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 SUPERFAMILY SSF55931 105 440 4.71E-80 T 29-03-2018 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 SMART SM01230 105 353 3.3E-66 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15205 78c9ca49f6d9aedff393f98f76493367 443 Gene3D G3DSA:3.10.20.70 1 101 1.6E-14 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 SMART SM00471 57 255 7.6E-10 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 Pfam PF01966 HD domain 61 125 9.2E-9 T 29-03-2018 IPR006674 HD domain AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 Hamap MF_01213 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 440 52.737 T 29-03-2018 IPR023024 dNTP triphosphohydrolase, type 3 GO:0016793 AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3410.10 239 351 1.7E-19 T 29-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 4.7E-98 T 29-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 SUPERFAMILY SSF109604 21 187 2.93E-64 T 29-03-2018 AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 SUPERFAMILY SSF109604 224 434 2.93E-64 T 29-03-2018 AM474_RS04435 26e9713ec4adde923c798dd755da30f3 443 Gene3D G3DSA:1.10.3210.10 1 232 7.3E-65 T 29-03-2018 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 SUPERFAMILY SSF52768 2 343 2.49E-87 T 29-03-2018 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 157 180 9.2E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 190 205 9.2E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 PRINTS PR01270 Histone deacetylase superfamily signature 276 286 9.2E-14 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 Gene3D G3DSA:3.40.800.20 1 345 9.7E-80 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS26105 7ce37a9b42d57f8bc41ecec4b5e5eba4 346 Pfam PF00850 Histone deacetylase domain 29 338 9.3E-64 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS02745 493ce96e79c6d2c59091cf41b4f4ba72 106 Pfam PF11747 Killing trait 11 78 1.3E-28 T 29-03-2018 IPR021070 Killing trait, RebB AM474_RS24160 da1d35e4cf272d78f085bc10d57d0136 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 1.2E-21 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AM474_RS24160 da1d35e4cf272d78f085bc10d57d0136 89 PIRSF PIRSF028784 1 89 2.5E-28 T 29-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AM474_RS01475 f224b96a6de8f9e03973f5aca3ec6d28 159 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 119 1.5E-45 T 29-03-2018 IPR028973 PhnB-like AM474_RS01475 f224b96a6de8f9e03973f5aca3ec6d28 159 PIRSF PIRSF021700 1 159 3.2E-67 T 29-03-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AM474_RS01475 f224b96a6de8f9e03973f5aca3ec6d28 159 SUPERFAMILY SSF54593 4 157 1.13E-47 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS01475 f224b96a6de8f9e03973f5aca3ec6d28 159 Gene3D G3DSA:3.10.180.10 1 132 4.2E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS32380 18ef204df3e1d1d6e3e18c9b50dee967 211 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 96 9.9E-10 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 511 633 7.8E-39 T 29-03-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 Pfam PF07514 Putative helicase 28 342 7.1E-121 T 29-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 SUPERFAMILY SSF46785 508 634 1.28E-35 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 Gene3D G3DSA:1.10.3210.10 48 261 4.4E-6 T 29-03-2018 AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 Gene3D G3DSA:2.40.10.200 529 633 2.6E-32 T 29-03-2018 AM474_RS23630 b7b6e52dead319f419400f758ed6e361 643 TIGRFAM TIGR03760 ICE_TraI_Pfluor: integrating conjugative element relaxase, PFGI-1 class 28 244 4.6E-90 T 29-03-2018 IPR022391 Integrating conjugative element relaxase, PFGI-1 class AM474_RS08455 1eaae58bf44e2690236afb295fe8b730 96 SUPERFAMILY SSF47413 5 66 1.01E-10 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS08455 1eaae58bf44e2690236afb295fe8b730 96 Pfam PF01381 Helix-turn-helix 11 60 2.5E-7 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS08455 1eaae58bf44e2690236afb295fe8b730 96 Gene3D G3DSA:1.10.260.40 1 95 3.6E-12 T 29-03-2018 AM474_RS08455 1eaae58bf44e2690236afb295fe8b730 96 SMART SM00530 10 63 2.9E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 SMART SM00052 433 679 1.7E-121 T 29-03-2018 IPR001633 EAL domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 421 5.1E-47 T 29-03-2018 IPR000160 GGDEF domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 SUPERFAMILY SSF55073 268 425 3.37E-54 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Gene3D G3DSA:3.30.70.270 264 430 5.1E-66 T 29-03-2018 AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 SUPERFAMILY SSF141868 439 682 8.76E-90 T 29-03-2018 IPR001633 EAL domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 2.7E-51 T 29-03-2018 IPR000160 GGDEF domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF00563 EAL domain 440 674 8.6E-73 T 29-03-2018 IPR001633 EAL domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Gene3D G3DSA:3.20.20.450 431 683 2.0E-100 T 29-03-2018 IPR001633 EAL domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 109 2.3E-21 T 29-03-2018 IPR005330 MHYT domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 245 8.7E-15 T 29-03-2018 IPR005330 MHYT domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 171 1.3E-15 T 29-03-2018 IPR005330 MHYT domain AM474_RS27855 53d2cd58ec644b056fff198b71156bbc 685 SMART SM00267 252 423 7.3E-68 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21460 f4da697dd17ea7d6ab6f81f17cb80591 155 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 4.2E-34 T 29-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 AM474_RS06550 c33d5ba4beb8db643a031949eb5038ce 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 203 3.6E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS06550 c33d5ba4beb8db643a031949eb5038ce 259 Gene3D G3DSA:3.40.225.10 9 259 5.5E-73 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS06550 c33d5ba4beb8db643a031949eb5038ce 259 SMART SM01007 24 203 4.8E-56 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS06550 c33d5ba4beb8db643a031949eb5038ce 259 SUPERFAMILY SSF53639 19 220 2.55E-57 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 Gene3D G3DSA:3.40.50.720 44 247 1.6E-65 T 29-03-2018 AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 Gene3D G3DSA:3.40.50.720 1 43 5.7E-10 T 29-03-2018 AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.1E-100 T 29-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.6E-46 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.3E-5 T 29-03-2018 AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.3E-12 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 SUPERFAMILY SSF51735 4 246 6.59E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04035 f8e6c68d25d7da7825ad10287e89cc1d 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 2.3E-63 T 29-03-2018 AM474_RS11525 1a93278188d6b075c19326ba3e638741 702 Pfam PF12571 Phage tail-collar fibre protein 7 158 4.0E-46 T 29-03-2018 IPR022225 Phage tail fibre protein AM474_RS11070 23900d192c3f73be4d006010650338a6 442 SUPERFAMILY SSF103491 15 419 1.44E-128 T 29-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PIRSF PIRSF004557 8 436 3.8E-119 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 29.003 T 29-03-2018 IPR026593 Protein translocase subunit SecY AM474_RS11070 23900d192c3f73be4d006010650338a6 442 Pfam PF00344 SecY translocase 75 412 1.1E-115 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 Gene3D G3DSA:1.10.3370.10 13 434 7.1E-157 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 5.5E-90 T 29-03-2018 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 7.8E-130 T 29-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS11070 23900d192c3f73be4d006010650338a6 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 29-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 Pfam PF00771 FHIPEP family 31 696 2.2E-267 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 29-03-2018 IPR025505 FHIPEP conserved site AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 704 4.3E-261 T 29-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PIRSF PIRSF005419 7 707 9.2E-249 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS26380 568e3e52fe935e2cea711c9c8910f812 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 1.5E-55 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.1740.10 8 74 2.7E-10 T 29-03-2018 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 160 4.8E-21 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 Pfam PF04545 Sigma-70, region 4 116 163 5.3E-13 T 29-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88659 92 164 1.61E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 SUPERFAMILY SSF88946 12 98 1.26E-10 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 Gene3D G3DSA:1.10.10.10 75 167 7.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29800 11e8403b93256486966480a2bf8d087d 169 Pfam PF04542 Sigma-70 region 2 15 80 2.2E-11 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS04580 9b50c905dbc639df4538009980379f98 586 SUPERFAMILY SSF53300 102 233 1.13E-12 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04580 9b50c905dbc639df4538009980379f98 586 Gene3D G3DSA:1.25.40.120 362 585 6.4E-13 T 29-03-2018 AM474_RS04580 9b50c905dbc639df4538009980379f98 586 Gene3D G3DSA:3.40.50.410 91 286 6.9E-14 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04580 9b50c905dbc639df4538009980379f98 586 Pfam PF00515 Tetratricopeptide repeat 410 441 1.6E-8 T 29-03-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 AM474_RS04580 9b50c905dbc639df4538009980379f98 586 SUPERFAMILY SSF48452 363 477 9.95E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04580 9b50c905dbc639df4538009980379f98 586 Pfam PF13519 von Willebrand factor type A domain 107 205 1.6E-10 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS04580 9b50c905dbc639df4538009980379f98 586 SMART SM00028 409 442 3.9E-7 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS11105 5795d52f7430457cc585af753fe24d1a 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 29-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11105 5795d52f7430457cc585af753fe24d1a 101 SUPERFAMILY SSF57716 2 101 1.14E-37 T 29-03-2018 AM474_RS11105 5795d52f7430457cc585af753fe24d1a 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.573 T 29-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AM474_RS11105 5795d52f7430457cc585af753fe24d1a 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.2E-24 T 29-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS11105 5795d52f7430457cc585af753fe24d1a 101 Gene3D G3DSA:4.10.830.10 1 101 8.6E-34 T 29-03-2018 AM474_RS13580 9b54ee338f5f838763c1e6943de478e6 441 Pfam PF07690 Major Facilitator Superfamily 40 397 1.6E-51 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13580 9b54ee338f5f838763c1e6943de478e6 441 Gene3D G3DSA:1.20.1250.20 234 440 2.7E-17 T 29-03-2018 AM474_RS13580 9b54ee338f5f838763c1e6943de478e6 441 SUPERFAMILY SSF103473 25 438 7.72E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13580 9b54ee338f5f838763c1e6943de478e6 441 Gene3D G3DSA:1.20.1250.20 26 227 1.1E-33 T 29-03-2018 AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 SMART SM00671 148 180 160.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 SMART SM00671 74 111 0.02 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 SMART SM00671 181 213 4.2 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 Gene3D G3DSA:2.60.40.1180 59 165 6.6E-13 T 29-03-2018 AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 Gene3D G3DSA:2.60.40.1180 166 224 4.2E-4 T 29-03-2018 AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 SUPERFAMILY SSF81901 133 221 2.88E-13 T 29-03-2018 AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 SUPERFAMILY SSF81901 38 159 2.09E-17 T 29-03-2018 AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 Pfam PF08238 Sel1 repeat 182 213 0.033 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 Pfam PF08238 Sel1 repeat 75 108 2.6E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS17435 c2e0d4023aba0282bb05188162dfd808 289 Pfam PF08238 Sel1 repeat 149 165 220.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS29285 33fea516beb1b69fcfbcf013d4eb6d8d 187 SUPERFAMILY SSF159275 5 187 5.1E-57 T 29-03-2018 AM474_RS29285 33fea516beb1b69fcfbcf013d4eb6d8d 187 Pfam PF06475 Putative glycolipid-binding 17 186 6.4E-55 T 29-03-2018 IPR009467 Putative glycolipid-binding protein AM474_RS23535 d40667151868dd96623c0c5c1d834ac0 69 Pfam PF04102 SlyX 3 69 4.3E-24 T 29-03-2018 IPR007236 SlyX AM474_RS23535 d40667151868dd96623c0c5c1d834ac0 69 Gene3D G3DSA:1.20.5.300 1 47 5.0E-17 T 29-03-2018 AM474_RS23535 d40667151868dd96623c0c5c1d834ac0 69 Hamap MF_00715 Protein SlyX [slyX]. 2 69 17.239 T 29-03-2018 IPR007236 SlyX AM474_RS13745 d6ad87728322ce78d3068c183de83f10 293 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 20 280 9.4E-72 T 29-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM474_RS13745 d6ad87728322ce78d3068c183de83f10 293 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 293 150.36 T 29-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM474_RS13745 d6ad87728322ce78d3068c183de83f10 293 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 18 282 1.3E-98 T 29-03-2018 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 Gene3D G3DSA:3.40.47.10 4 278 8.6E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 SUPERFAMILY SSF53901 302 425 5.76E-28 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 SUPERFAMILY SSF53901 7 282 1.43E-54 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 PIRSF PIRSF000429 1 425 2.6E-99 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 Pfam PF00108 Thiolase, N-terminal domain 7 275 3.4E-46 T 29-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 Pfam PF02803 Thiolase, C-terminal domain 302 425 1.0E-29 T 29-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 424 1.5E-112 T 29-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 AM474_RS19300 a2bebdf90d52a53be8fdd02a9ae53708 425 Gene3D G3DSA:3.40.47.10 279 423 5.2E-25 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 PIRSF PIRSF000412 1 415 1.3E-167 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.094 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 Pfam PF00464 Serine hydroxymethyltransferase 10 386 6.8E-181 T 29-03-2018 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 Gene3D G3DSA:3.40.640.10 37 275 1.1E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 SUPERFAMILY SSF53383 7 416 1.35E-181 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS15700 508222094c25c4ab46e65242adfd7109 417 Gene3D G3DSA:3.90.1150.10 276 416 2.2E-57 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 2 380 67.649 T 29-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 Gene3D G3DSA:3.90.1150.10 247 382 7.9E-39 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 3.2E-124 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 Gene3D G3DSA:3.40.640.10 4 246 4.8E-49 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 SUPERFAMILY SSF53383 5 378 2.39E-111 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS07090 a558582b5a934130db5d44584afaaf60 382 PIRSF PIRSF000390 1 382 4.7E-109 T 29-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AM474_RS01900 1ba05778b64acd0a56a0951144e6000d 375 Pfam PF15609 Phosphoribosyl transferase 33 211 5.7E-58 T 29-03-2018 AM474_RS01900 1ba05778b64acd0a56a0951144e6000d 375 Gene3D G3DSA:3.40.50.2020 36 218 9.2E-20 T 29-03-2018 AM474_RS01900 1ba05778b64acd0a56a0951144e6000d 375 Pfam PF12500 TRSP domain C terminus to PRTase_2 269 365 7.2E-21 T 29-03-2018 IPR022537 TRSP domain AM474_RS01900 1ba05778b64acd0a56a0951144e6000d 375 PIRSF PIRSF020967 1 371 2.8E-140 T 29-03-2018 IPR011214 Uncharacterised conserved protein UCP020967 AM474_RS01900 1ba05778b64acd0a56a0951144e6000d 375 SUPERFAMILY SSF53271 34 203 1.42E-13 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS11825 5c00b1f0a95bb53fc56ca69faa37532f 923 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 562 872 2.0E-7 T 29-03-2018 IPR031161 Peptidase family M60 domain AM474_RS11825 5c00b1f0a95bb53fc56ca69faa37532f 923 SMART SM01276 450 795 3.4E-8 T 29-03-2018 IPR031161 Peptidase family M60 domain AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 SUPERFAMILY SSF160113 54 107 1.96E-15 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 1.9E-19 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 Pfam PF07411 Domain of unknown function (DUF1508) 10 53 1.7E-18 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 SUPERFAMILY SSF160113 1 54 1.24E-16 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 Gene3D G3DSA:3.10.20.10 42 68 0.22 T 29-03-2018 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 Gene3D G3DSA:3.30.160.160 69 100 5.7E-14 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS13080 d67371e06fd524b651f5d3e09640fe2c 110 Gene3D G3DSA:3.30.160.160 5 41 5.3E-14 T 29-03-2018 IPR010879 Domain of unknown function DUF1508 AM474_RS07845 76fa3ddb33517a56549782d01c98fc13 431 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 412 3.9E-131 T 29-03-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA AM474_RS07845 76fa3ddb33517a56549782d01c98fc13 431 SMART SM01154 41 419 8.4E-183 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 AM474_RS07845 76fa3ddb33517a56549782d01c98fc13 431 Pfam PF08014 Domain of unknown function (DUF1704) 42 416 3.1E-133 T 29-03-2018 IPR012548 Protein of unknown function DUF1704 AM474_RS09480 94a089190b7b8295117922d64ce56bf8 196 SUPERFAMILY SSF55729 15 189 1.19E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS09480 94a089190b7b8295117922d64ce56bf8 196 Gene3D G3DSA:3.40.630.30 8 196 4.4E-25 T 29-03-2018 AM474_RS09480 94a089190b7b8295117922d64ce56bf8 196 Pfam PF13302 Acetyltransferase (GNAT) domain 21 162 1.9E-30 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS31630 1252fc7f1d71c76e4da9be099838700e 251 Pfam PF00005 ABC transporter 31 171 1.2E-21 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS31630 1252fc7f1d71c76e4da9be099838700e 251 Gene3D G3DSA:3.40.50.300 5 250 6.5E-43 T 29-03-2018 AM474_RS31630 1252fc7f1d71c76e4da9be099838700e 251 SMART SM00382 40 226 8.6E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31630 1252fc7f1d71c76e4da9be099838700e 251 SUPERFAMILY SSF52540 9 218 1.75E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31630 1252fc7f1d71c76e4da9be099838700e 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 PRINTS PR00605 Class IC cytochrome C signature 308 319 1.3E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 PRINTS PR00605 Class IC cytochrome C signature 361 383 1.3E-5 T 29-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 Gene3D G3DSA:1.10.760.10 161 292 1.3E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 Gene3D G3DSA:1.10.760.10 9 144 7.5E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 PIRSF PIRSF000018 1 415 2.7E-147 T 29-03-2018 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 Pfam PF00034 Cytochrome c 31 129 9.5E-7 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 SUPERFAMILY SSF46626 176 289 2.16E-14 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 Gene3D G3DSA:1.10.760.10 293 415 5.4E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 300 383 1.2E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 SUPERFAMILY SSF46626 17 152 3.51E-22 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20230 63179395f0f14a4245e289cf1da25fe8 415 SUPERFAMILY SSF46626 300 403 3.84E-20 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 Gene3D G3DSA:1.10.287.950 65 448 9.3E-7 T 29-03-2018 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 Gene3D G3DSA:1.10.287.950 449 673 2.9E-50 T 29-03-2018 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00672 HAMP domain 350 391 2.8E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 SUPERFAMILY SSF58104 364 673 1.44E-74 T 29-03-2018 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 399 449 78.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 SMART SM00304 344 396 5.4E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 SMART SM00283 411 672 3.7E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS20780 eb2ba94225fc699254944b829a0adf15 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 638 1.1E-42 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 Gene3D G3DSA:3.40.50.720 3 258 4.9E-51 T 29-03-2018 AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 Pfam PF00106 short chain dehydrogenase 4 188 7.9E-39 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.2E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 178 0.0032 T 29-03-2018 AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 29-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 SUPERFAMILY SSF51735 2 232 3.73E-54 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS25720 f9741cd02242145d727f8198d957ac0c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.2E-21 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17185 8a6b86be6b85c4a5108c87896bff6571 257 Gene3D G3DSA:3.20.20.370 24 245 1.4E-77 T 29-03-2018 AM474_RS17185 8a6b86be6b85c4a5108c87896bff6571 257 Pfam PF04748 Divergent polysaccharide deacetylase 35 241 2.2E-72 T 29-03-2018 IPR006837 Divergent polysaccharide deacetylase AM474_RS17185 8a6b86be6b85c4a5108c87896bff6571 257 SUPERFAMILY SSF88713 31 242 1.22E-65 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 32 313 3.4E-76 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 Gene3D G3DSA:3.40.190.10 27 133 1.3E-16 T 29-03-2018 AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 Gene3D G3DSA:3.40.190.10 134 318 1.2E-35 T 29-03-2018 AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 SUPERFAMILY SSF53850 30 256 2.06E-54 T 29-03-2018 AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 SMART SM00062 31 247 6.2E-31 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS06625 4465edf66392a083e887f5f11437ee42 323 Pfam PF09084 NMT1/THI5 like 56 250 1.8E-16 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS02235 5bffcf2a527559db9e03b73c09b3f59d 158 Pfam PF09498 Protein of unknown function (DUF2388) 97 154 2.1E-17 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS27405 fb5856cd480c013d3b446b492a391e4a 135 Pfam PF16985 Domain of unknown function (DUF5086) 5 133 3.3E-61 T 29-03-2018 IPR031561 Protein of unknown function DUF5086 AM474_RS22215 08b5ba9611be35247e9213c5422bea56 464 Pfam PF01425 Amidase 28 442 1.4E-89 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS22215 08b5ba9611be35247e9213c5422bea56 464 SUPERFAMILY SSF75304 2 451 2.09E-123 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS22215 08b5ba9611be35247e9213c5422bea56 464 Gene3D G3DSA:3.90.1300.10 1 462 8.1E-123 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS23665 9db4fcfde9c75cf05703b87373eb69a3 483 Gene3D G3DSA:3.40.309.10 267 465 1.7E-68 T 29-03-2018 AM474_RS23665 9db4fcfde9c75cf05703b87373eb69a3 483 Gene3D G3DSA:3.40.605.10 1 266 1.2E-89 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23665 9db4fcfde9c75cf05703b87373eb69a3 483 Pfam PF00171 Aldehyde dehydrogenase family 18 478 9.9E-156 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS23665 9db4fcfde9c75cf05703b87373eb69a3 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS23665 9db4fcfde9c75cf05703b87373eb69a3 483 SUPERFAMILY SSF53720 5 479 3.4E-152 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS29435 f905dea881ee33c158ecdcd1b5d4da90 279 SUPERFAMILY SSF53448 2 270 5.18E-64 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS29435 f905dea881ee33c158ecdcd1b5d4da90 279 Pfam PF00483 Nucleotidyl transferase 9 267 4.1E-31 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS29435 f905dea881ee33c158ecdcd1b5d4da90 279 Gene3D G3DSA:3.90.550.10 3 275 8.3E-56 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS29435 f905dea881ee33c158ecdcd1b5d4da90 279 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 1.9E-122 T 29-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AM474_RS04190 957900ece4e0a1f4e35a8b29af1ddadb 224 PIRSF PIRSF006102 4 214 2.1E-65 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS04190 957900ece4e0a1f4e35a8b29af1ddadb 224 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 196 7.2E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS04190 957900ece4e0a1f4e35a8b29af1ddadb 224 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 208 1.8E-108 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM474_RS04190 957900ece4e0a1f4e35a8b29af1ddadb 224 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 3 208 36.649 T 29-03-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.40.190.80 148 268 1.6E-36 T 29-03-2018 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 Gene3D G3DSA:3.30.540.10 1 147 2.4E-47 T 29-03-2018 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 Pfam PF00459 Inositol monophosphatase family 1 258 1.1E-66 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 160 186 1.5E-21 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-21 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 1.5E-21 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 202 214 1.5E-21 T 29-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 29-03-2018 IPR020583 Inositol monophosphatase, metal-binding site AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 29-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 SUPERFAMILY SSF56655 1 265 1.31E-84 T 29-03-2018 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS08790 cedc47271ccc06ebf001635b73db0c30 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 2.6E-62 T 29-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM474_RS05245 545fc42df5c159a7e61ee90a3a9b6bf2 209 SUPERFAMILY SSF55821 1 204 3.05E-63 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS05245 545fc42df5c159a7e61ee90a3a9b6bf2 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.8E-62 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM474_RS05245 545fc42df5c159a7e61ee90a3a9b6bf2 209 Gene3D G3DSA:3.90.870.10 1 205 3.2E-56 T 29-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain AM474_RS05245 545fc42df5c159a7e61ee90a3a9b6bf2 209 Pfam PF01300 Telomere recombination 22 198 1.9E-44 T 29-03-2018 IPR006070 YrdC-like domain GO:0003725 AM474_RS05575 91cc378e6d187665d8c6dbea75f826aa 159 Gene3D G3DSA:2.60.40.1180 70 158 4.6E-7 T 29-03-2018 AM474_RS05575 91cc378e6d187665d8c6dbea75f826aa 159 SUPERFAMILY SSF81901 41 158 6.8E-13 T 29-03-2018 AM474_RS05575 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 86 122 11.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS05575 91cc378e6d187665d8c6dbea75f826aa 159 SMART SM00671 123 159 0.0041 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00155 Aminotransferase class I and II 137 450 1.7E-28 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 3.3E-19 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 SMART SM00345 10 69 4.6E-22 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.90.1150.10 375 471 2.3E-21 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF46785 4 73 1.16E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:3.40.640.10 124 374 2.0E-43 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 Gene3D G3DSA:1.10.10.10 2 71 8.4E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03670 3c206f778e0dccbe6a3bb60e66eb0233 479 SUPERFAMILY SSF53383 94 465 1.53E-89 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.6E-61 T 29-03-2018 AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 Gene3D G3DSA:3.40.50.720 40 245 1.4E-57 T 29-03-2018 AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 Gene3D G3DSA:3.40.50.720 5 39 1.2E-6 T 29-03-2018 AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-7 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 0.0039 T 29-03-2018 AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.9E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS26470 eb8e36fb21c65b38c9d01937ade76b48 245 SUPERFAMILY SSF51735 7 244 6.91E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27725 0cab62ec5a97ea17cfc8673cfffb71fb 121 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 121 3.9E-58 T 29-03-2018 IPR012672 Type III secretion system YscX AM474_RS27725 0cab62ec5a97ea17cfc8673cfffb71fb 121 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 121 9.7E-54 T 29-03-2018 IPR012672 Type III secretion system YscX AM474_RS02450 36daac240c5ac662a4a74b18c0e17940 202 Gene3D G3DSA:1.10.8.200 1 65 0.0079 T 29-03-2018 AM474_RS27505 717745d33f69c7917cec66639e92e1ef 135 Pfam PF04965 Gene 25-like lysozyme 26 113 1.1E-15 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM474_RS27505 717745d33f69c7917cec66639e92e1ef 135 Gene3D G3DSA:3.10.450.40 4 132 9.8E-20 T 29-03-2018 AM474_RS27505 717745d33f69c7917cec66639e92e1ef 135 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 134 2.5E-38 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AM474_RS27505 717745d33f69c7917cec66639e92e1ef 135 SUPERFAMILY SSF160719 24 128 1.96E-19 T 29-03-2018 AM474_RS15200 648ca170f212e6b2d92b3a81d1e335d7 222 Pfam PF05013 N-formylglutamate amidohydrolase 1 203 6.1E-38 T 29-03-2018 IPR007709 N-formylglutamate amidohydrolase AM474_RS15200 648ca170f212e6b2d92b3a81d1e335d7 222 SUPERFAMILY SSF53187 1 222 3.45E-63 T 29-03-2018 AM474_RS15200 648ca170f212e6b2d92b3a81d1e335d7 222 PIRSF PIRSF029730 1 222 5.2E-90 T 29-03-2018 IPR011227 Uncharacterised conserved protein UCP029730 AM474_RS15200 648ca170f212e6b2d92b3a81d1e335d7 222 Gene3D G3DSA:3.40.630.40 1 222 5.9E-51 T 29-03-2018 AM474_RS08435 61e075833065c142d0ec5d352f51da46 94 SUPERFAMILY SSF46955 21 78 9.7E-9 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS08435 61e075833065c142d0ec5d352f51da46 94 Pfam PF12728 Helix-turn-helix domain 22 72 1.7E-10 T 29-03-2018 AM474_RS08435 61e075833065c142d0ec5d352f51da46 94 Gene3D G3DSA:1.10.10.10 22 86 1.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18955 c900d13e2a93a0a7442fddbcd3b1dda2 425 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 3.6E-18 T 29-03-2018 IPR011723 Zinc finger/thioredoxin putative AM474_RS18955 c900d13e2a93a0a7442fddbcd3b1dda2 425 Pfam PF13719 zinc-ribbon domain 6 41 2.3E-10 T 29-03-2018 IPR011723 Zinc finger/thioredoxin putative AM474_RS18955 c900d13e2a93a0a7442fddbcd3b1dda2 425 Pfam PF11906 Protein of unknown function (DUF3426) 276 421 2.6E-37 T 29-03-2018 IPR021834 Protein of unknown function DUF3426 AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 SUPERFAMILY SSF53850 1 258 1.71E-67 T 29-03-2018 AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 257 4.4E-57 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 SMART SM00062 35 259 2.2E-57 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 SMART SM00079 35 258 1.6E-5 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 159 266 7.4E-16 T 29-03-2018 AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 Gene3D G3DSA:3.40.190.10 6 158 1.2E-33 T 29-03-2018 AM474_RS17490 763d15a090019a33143b4b6921deae5b 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS20160 9ed8377f253996b1de72bdbf66fa0161 273 Gene3D G3DSA:3.30.2010.10 66 162 3.8E-22 T 29-03-2018 AM474_RS20160 9ed8377f253996b1de72bdbf66fa0161 273 Pfam PF01435 Peptidase family M48 74 257 6.1E-40 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 230 5.0E-76 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 227 2.4E-64 T 29-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 SUPERFAMILY SSF53448 10 230 5.18E-55 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 8 232 41.354 T 29-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 29-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM474_RS07525 3ed5656cd1a3bf169d767ca13b889b71 234 Gene3D G3DSA:3.90.550.10 3 233 9.9E-45 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS15070 f33644cd5411fe138ca45be16e7362f6 213 Pfam PF08856 Protein of unknown function (DUF1826) 17 210 7.5E-65 T 29-03-2018 IPR014955 Protein of unknown function DUF1826 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 Gene3D G3DSA:3.10.290.10 12 80 2.0E-14 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 Pfam PF00849 RNA pseudouridylate synthase 104 253 5.6E-31 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 316 6.9E-78 T 29-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 SMART SM00363 23 82 4.4E-7 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55120 91 317 3.68E-59 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 Gene3D G3DSA:3.30.2350.10 94 318 1.1E-65 T 29-03-2018 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 Pfam PF01479 S4 domain 23 69 3.1E-9 T 29-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 AM474_RS04075 efca1fcab08f17c163428cb281547324 318 SUPERFAMILY SSF55174 22 73 3.34E-8 T 29-03-2018 AM474_RS07165 8dfbf68bff020940547f580fb1ebb354 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 79 4.3E-23 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS07165 8dfbf68bff020940547f580fb1ebb354 97 Gene3D G3DSA:3.30.70.100 1 95 1.0E-23 T 29-03-2018 AM474_RS07165 8dfbf68bff020940547f580fb1ebb354 97 SUPERFAMILY SSF54909 1 95 1.61E-29 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS21345 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF08478 POTRA domain, FtsQ-type 77 145 8.2E-18 T 29-03-2018 IPR013685 POTRA domain, FtsQ-type AM474_RS21345 f889acbf6b86213a0f3d0ea2afcd3efd 287 Pfam PF03799 Cell division protein FtsQ 149 262 8.0E-23 T 29-03-2018 IPR005548 Cell division protein FtsQ/DivIB AM474_RS21345 f889acbf6b86213a0f3d0ea2afcd3efd 287 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 46 270 25.096 T 29-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 AM474_RS01355 755b59894ed154162178b5197f6c985c 529 SUPERFAMILY SSF103473 15 399 2.88E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS01355 755b59894ed154162178b5197f6c985c 529 Gene3D G3DSA:3.30.70.100 418 515 3.7E-8 T 29-03-2018 AM474_RS01355 755b59894ed154162178b5197f6c985c 529 Gene3D G3DSA:1.20.1250.20 4 199 1.2E-21 T 29-03-2018 AM474_RS01355 755b59894ed154162178b5197f6c985c 529 Gene3D G3DSA:1.20.1250.20 216 407 2.0E-17 T 29-03-2018 AM474_RS01355 755b59894ed154162178b5197f6c985c 529 Pfam PF05977 Transmembrane secretion effector 6 523 2.7E-220 T 29-03-2018 IPR010290 Transmembrane secretion effector AM474_RS21745 5b4b4b586bc2bd2f4689735b444550bf 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 367 1.4E-41 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21745 5b4b4b586bc2bd2f4689735b444550bf 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 365 7.1E-43 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21745 5b4b4b586bc2bd2f4689735b444550bf 375 SUPERFAMILY SSF55073 216 366 4.08E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS21745 5b4b4b586bc2bd2f4689735b444550bf 375 SMART SM00267 200 369 1.6E-58 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21745 5b4b4b586bc2bd2f4689735b444550bf 375 Gene3D G3DSA:3.30.70.270 205 373 8.3E-53 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.50.50.60 1 48 1.9E-9 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 3.6E-39 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 SUPERFAMILY SSF51905 1 344 5.1E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 2.0E-71 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.5E-82 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.5E-42 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.5E-42 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 8.5E-42 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 8.5E-42 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 8.5E-42 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.50.50.60 279 343 7.8E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 PIRSF PIRSF000350 1 471 3.5E-90 T 29-03-2018 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.30.390.30 344 470 1.1E-44 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:3.50.50.60 122 258 4.2E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 SUPERFAMILY SSF55424 349 473 2.58E-42 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.7E-164 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM474_RS27110 5c46978d0c2788de51dce739fcaacd8f 478 Gene3D G3DSA:1.10.287.990 49 112 7.5E-22 T 29-03-2018 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 Gene3D G3DSA:3.40.605.10 1 257 2.3E-98 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 Gene3D G3DSA:3.40.309.10 258 458 2.1E-75 T 29-03-2018 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 SUPERFAMILY SSF53720 2 478 6.54E-171 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 2 485 1.0E-223 T 29-03-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 Pfam PF00171 Aldehyde dehydrogenase family 13 472 1.5E-174 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS10485 b95ea3745870ce83281eeffb96ae3b6f 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS04625 ec4998b63a9c85d079de523d2482a11c 654 Pfam PF06980 Protein of unknown function (DUF1302) 40 654 1.2E-185 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS15695 c9338df0d8326f2f057a116ce13a5b92 416 Gene3D G3DSA:3.50.50.60 30 416 3.1E-46 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15695 c9338df0d8326f2f057a116ce13a5b92 416 SUPERFAMILY SSF51905 33 254 2.1E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15695 c9338df0d8326f2f057a116ce13a5b92 416 SUPERFAMILY SSF51905 344 403 2.1E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS15695 c9338df0d8326f2f057a116ce13a5b92 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 2.1E-55 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS15695 c9338df0d8326f2f057a116ce13a5b92 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 2.0E-234 T 29-03-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 4.1E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 Gene3D G3DSA:3.30.700.10 10 149 1.4E-16 T 29-03-2018 AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 SUPERFAMILY SSF54523 10 134 1.1E-18 T 29-03-2018 AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 7.8E-7 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20595 dc35f59d662ef70e7ad3bce4a8da7b38 162 Pfam PF12019 Type II transport protein GspH 45 147 2.0E-13 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 SUPERFAMILY SSF46785 3 108 5.44E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 Gene3D G3DSA:3.40.190.10 174 262 5.3E-13 T 29-03-2018 AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 SUPERFAMILY SSF53850 87 281 1.76E-31 T 29-03-2018 AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 Gene3D G3DSA:1.10.10.10 1 86 1.1E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 Gene3D G3DSA:3.40.190.10 87 173 2.2E-15 T 29-03-2018 AM474_RS10400 c4d2dbc4799a702a11e093605cc4176c 291 Pfam PF03466 LysR substrate binding domain 85 281 6.7E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS22460 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 122 175 1.3E-11 T 29-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal AM474_RS22460 83e31d4118eb4d4360df8fb5e4d0b54e 194 SUPERFAMILY SSF89069 6 72 7.32E-14 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM474_RS22460 83e31d4118eb4d4360df8fb5e4d0b54e 194 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 75 3.0E-16 T 29-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 Gene3D G3DSA:1.20.1250.20 3 210 8.4E-39 T 29-03-2018 AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 Gene3D G3DSA:1.20.1250.20 247 443 6.7E-22 T 29-03-2018 AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 75 90 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 SUPERFAMILY SSF103473 4 436 9.68E-75 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS18685 fbf240d1ba0ea63bff5f2842fe09c854 444 Pfam PF07690 Major Facilitator Superfamily 33 338 2.8E-36 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:2.160.10.10 173 341 1.7E-13 T 29-03-2018 AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 6.3E-187 T 29-03-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 1.1E-15 T 29-03-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 286 3.8E-12 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 341 44.255 T 29-03-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 SUPERFAMILY SSF51161 101 306 3.33E-37 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS07690 d7e2d0f8b36b1a4bc524e0b73b2a9e29 344 Gene3D G3DSA:3.30.60.70 132 172 7.5E-15 T 29-03-2018 AM474_RS06805 d5a971f4eef2d5501b7f829e0fd984b9 295 SUPERFAMILY SSF53474 206 274 1.08E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS06805 d5a971f4eef2d5501b7f829e0fd984b9 295 SUPERFAMILY SSF53474 8 175 1.08E-40 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS06805 d5a971f4eef2d5501b7f829e0fd984b9 295 Pfam PF00561 alpha/beta hydrolase fold 30 252 6.4E-7 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS06805 d5a971f4eef2d5501b7f829e0fd984b9 295 Gene3D G3DSA:3.40.50.1820 4 274 2.1E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 SUPERFAMILY SSF110997 464 528 9.42E-5 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 Pfam PF05036 Sporulation related domain 465 537 2.8E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 Gene3D G3DSA:3.30.70.1070 466 533 7.8E-6 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 SUPERFAMILY SSF52540 19 246 3.63E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 Pfam PF13401 AAA domain 49 171 1.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17970 03f5d1098549fffac968c2072097ff50 551 Gene3D G3DSA:3.40.50.300 35 187 3.4E-7 T 29-03-2018 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:3.40.190.10 38 151 4.5E-5 T 29-03-2018 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 SUPERFAMILY SSF53850 47 284 3.6E-24 T 29-03-2018 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 271 6.2E-8 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:3.40.190.10 152 241 3.0E-7 T 29-03-2018 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 Pfam PF01464 Transglycosylase SLT domain 310 418 4.1E-16 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 Gene3D G3DSA:1.10.530.10 287 463 2.6E-28 T 29-03-2018 AM474_RS03510 c4f1faca8d7c96a35addfcd9260bb268 476 SUPERFAMILY SSF53955 285 457 3.38E-31 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 SUPERFAMILY SSF53850 27 256 3.96E-46 T 29-03-2018 AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 250 5.8E-30 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 Gene3D G3DSA:3.40.190.10 26 140 2.2E-20 T 29-03-2018 AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 Gene3D G3DSA:3.40.190.10 141 225 4.5E-13 T 29-03-2018 AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 SMART SM00062 36 258 2.2E-44 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09010 f39d37b273fb3dd6c50cc1a274897b13 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS27275 a0f9c5ca5a3caffa308c91bbd9fd3417 213 PIRSF PIRSF006324 1 208 1.1E-44 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS27275 a0f9c5ca5a3caffa308c91bbd9fd3417 213 Pfam PF01810 LysE type translocator 16 205 4.6E-35 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 ProSitePatterns PS00622 LuxR-type HTH domain signature. 216 243 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 201 253 7.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 216 2.0E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 232 244 2.0E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 216 232 2.0E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 SMART SM00421 199 256 2.7E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 Gene3D G3DSA:1.10.10.10 71 259 1.9E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00790 bde3bbee0ebf99669f5a86091bac261b 268 SUPERFAMILY SSF46894 189 257 2.01E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS02485 365cb1526d40e9d922c572cb46fb0309 119 Gene3D G3DSA:3.10.450.50 2 116 9.8E-23 T 29-03-2018 AM474_RS02485 365cb1526d40e9d922c572cb46fb0309 119 SUPERFAMILY SSF54427 1 116 3.99E-20 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS02485 365cb1526d40e9d922c572cb46fb0309 119 Pfam PF14534 Domain of unknown function (DUF4440) 7 109 3.5E-12 T 29-03-2018 IPR027843 Domain of unknown function DUF4440 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PIRSF PIRSF000238 1 520 6.3E-265 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Pfam PF13192 Thioredoxin domain 124 192 1.8E-8 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 SUPERFAMILY SSF52833 1 100 2.57E-30 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 29-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Gene3D G3DSA:3.50.50.60 370 519 5.9E-25 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 SUPERFAMILY SSF51905 202 513 1.3E-52 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 2.7E-41 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 2.7E-41 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 2.7E-41 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 2.7E-41 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 2.7E-41 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Gene3D G3DSA:3.50.50.60 199 369 9.1E-28 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 503 4.4E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 5.4E-66 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 SUPERFAMILY SSF52833 103 196 3.21E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Gene3D G3DSA:3.40.30.10 102 196 1.3E-7 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 Gene3D G3DSA:3.40.30.10 1 93 1.6E-27 T 29-03-2018 AM474_RS14080 5c8fe195af33ae0d613a5840cfe94a93 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 3.2E-244 T 29-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 AM474_RS06880 8f715af309c4507f620776a45dc0cb45 214 Pfam PF04205 FMN-binding domain 105 194 1.7E-17 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS06880 8f715af309c4507f620776a45dc0cb45 214 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 6 199 27.966 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM474_RS06880 8f715af309c4507f620776a45dc0cb45 214 SMART SM00900 105 197 1.4E-36 T 29-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 AM474_RS06880 8f715af309c4507f620776a45dc0cb45 214 PIRSF PIRSF006091 1 210 3.7E-75 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM474_RS06880 8f715af309c4507f620776a45dc0cb45 214 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 14 198 2.6E-67 T 29-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 130 193 4.4E-7 T 29-03-2018 AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 SUPERFAMILY SSF47616 77 205 6.68E-18 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 SUPERFAMILY SSF52833 5 108 2.88E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 Gene3D G3DSA:1.20.1050.10 97 206 3.7E-13 T 29-03-2018 AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 86 6.3E-18 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS12350 cba08a9855f6024a36eeabbd438333c4 206 Gene3D G3DSA:3.40.30.10 2 96 1.1E-15 T 29-03-2018 AM474_RS06065 1b5f01e6e04daf9f8893278bffc47d6c 116 SUPERFAMILY SSF47226 3 113 4.84E-26 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS06065 1b5f01e6e04daf9f8893278bffc47d6c 116 Pfam PF01627 Hpt domain 25 100 1.6E-14 T 29-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 AM474_RS06065 1b5f01e6e04daf9f8893278bffc47d6c 116 Gene3D G3DSA:1.20.120.160 1 110 1.8E-22 T 29-03-2018 AM474_RS05225 165ee7ff54e8cc78b5ccf5dde78b6ed8 60 Pfam PF06945 Protein of unknown function (DUF1289) 3 47 2.2E-18 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 2.1E-54 T 29-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 Gene3D G3DSA:3.60.21.10 74 281 6.6E-27 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 Gene3D G3DSA:3.60.21.10 1 73 2.3E-14 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 SUPERFAMILY SSF56300 1 345 1.46E-56 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 284 378 2.6E-16 T 29-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AM474_RS22010 1e35cff3c303cac94b4840371e22d4c4 409 Pfam PF00149 Calcineurin-like phosphoesterase 1 231 1.1E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 SUPERFAMILY SSF51905 224 316 6.02E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 SUPERFAMILY SSF51905 502 567 6.02E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 SUPERFAMILY SSF51905 11 154 6.02E-44 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 Gene3D G3DSA:3.90.700.10 349 497 2.6E-32 T 29-03-2018 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 SUPERFAMILY SSF56425 324 502 5.93E-35 T 29-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 Gene3D G3DSA:3.50.50.60 1 290 4.3E-30 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30825 653be7de22daeeff4fe76f446fd01885 577 Pfam PF00890 FAD binding domain 14 549 1.6E-115 T 29-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM474_RS14175 0b5eea614736a8e6a849780f29edd0a4 136 PIRSF PIRSF007951 1 136 2.2E-60 T 29-03-2018 IPR009413 Hemolysin, aegerolysin type GO:0019836 AM474_RS14175 0b5eea614736a8e6a849780f29edd0a4 136 Pfam PF06355 Aegerolysin 4 134 7.7E-44 T 29-03-2018 IPR009413 Hemolysin, aegerolysin type GO:0019836 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:3.40.190.10 18 165 1.6E-17 T 29-03-2018 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 268 5.6E-27 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 6 489 45.366 T 29-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53850 45 268 1.59E-37 T 29-03-2018 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:1.10.530.10 273 453 2.1E-32 T 29-03-2018 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Gene3D G3DSA:3.40.190.10 166 266 0.012 T 29-03-2018 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SMART SM00062 44 269 1.1E-30 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 312 340 - T 29-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 Pfam PF01464 Transglycosylase SLT domain 295 402 5.4E-20 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53955 435 453 9.68E-33 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS08195 d6cf5e89f5780c1e6a8f985c9e5f80ee 490 SUPERFAMILY SSF53955 246 400 9.68E-33 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS15435 cb93e6fb2e093ca1a9ae2d55ebe32b5f 652 Pfam PF13387 Domain of unknown function (DUF4105) 271 441 7.2E-31 T 29-03-2018 IPR025178 Domain of unknown function DUF4105 AM474_RS15435 cb93e6fb2e093ca1a9ae2d55ebe32b5f 652 Gene3D G3DSA:3.40.390.10 35 245 2.5E-7 T 29-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AM474_RS12930 3deae47220cc36030d61926e71950fae 192 Gene3D G3DSA:3.40.1130.10 9 170 6.7E-21 T 29-03-2018 AM474_RS12930 3deae47220cc36030d61926e71950fae 192 Pfam PF01553 Acyltransferase 31 146 5.2E-10 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS12930 3deae47220cc36030d61926e71950fae 192 SMART SM00563 38 150 8.8E-20 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS12930 3deae47220cc36030d61926e71950fae 192 SUPERFAMILY SSF69593 23 169 1.96E-21 T 29-03-2018 AM474_RS15860 3b9433d543ff64c0f4499bebc639d6af 355 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 19 350 2.3E-114 T 29-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 AM474_RS15860 3b9433d543ff64c0f4499bebc639d6af 355 Pfam PF03601 Conserved hypothetical protein 698 21 335 1.5E-114 T 29-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 Gene3D G3DSA:2.40.50.140 1 69 4.6E-27 T 29-03-2018 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 PIRSF PIRSF002599 1 69 1.4E-22 T 29-03-2018 IPR012156 Cold shock, CspA GO:0003676 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 SMART SM00357 6 69 2.3E-26 T 29-03-2018 IPR011129 Cold shock domain GO:0003676 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 SUPERFAMILY SSF50249 4 67 3.81E-24 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 27 36 4.3E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 42 60 4.3E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 PRINTS PR00050 Cold shock protein signature 7 22 4.3E-18 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS24735 25b3f7c5ef66f67e18093a542955f7de 69 Pfam PF00313 'Cold-shock' DNA-binding domain 7 68 1.3E-27 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS10550 48c225b0701710fedd3f962ee7df62cd 402 Gene3D G3DSA:1.20.1250.20 208 398 7.4E-14 T 29-03-2018 AM474_RS10550 48c225b0701710fedd3f962ee7df62cd 402 SUPERFAMILY SSF103473 9 397 1.44E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10550 48c225b0701710fedd3f962ee7df62cd 402 Gene3D G3DSA:1.20.1250.20 13 196 5.5E-34 T 29-03-2018 AM474_RS10550 48c225b0701710fedd3f962ee7df62cd 402 Pfam PF07690 Major Facilitator Superfamily 25 351 2.3E-40 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS10550 48c225b0701710fedd3f962ee7df62cd 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 16 392 2.2E-93 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM474_RS01805 d6088e116c9980e333c55aef06024c37 302 Pfam PF05621 Bacterial TniB protein 27 278 9.4E-104 T 29-03-2018 IPR008868 Bacterial TniB AM474_RS01805 d6088e116c9980e333c55aef06024c37 302 SUPERFAMILY SSF52540 34 228 9.76E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01805 d6088e116c9980e333c55aef06024c37 302 Gene3D G3DSA:3.40.50.300 20 212 1.2E-9 T 29-03-2018 AM474_RS26220 d6088e116c9980e333c55aef06024c37 302 Pfam PF05621 Bacterial TniB protein 27 278 9.4E-104 T 29-03-2018 IPR008868 Bacterial TniB AM474_RS26220 d6088e116c9980e333c55aef06024c37 302 SUPERFAMILY SSF52540 34 228 9.76E-17 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26220 d6088e116c9980e333c55aef06024c37 302 Gene3D G3DSA:3.40.50.300 20 212 1.2E-9 T 29-03-2018 AM474_RS13925 d296b92d80a4395361cd5de924acda27 235 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 57 219 3.1E-49 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13925 d296b92d80a4395361cd5de924acda27 235 SUPERFAMILY SSF55073 65 219 6.28E-46 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS13925 d296b92d80a4395361cd5de924acda27 235 SMART SM00267 49 220 2.6E-56 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13925 d296b92d80a4395361cd5de924acda27 235 Pfam PF00990 Diguanylate cyclase, GGDEF domain 61 215 4.1E-45 T 29-03-2018 IPR000160 GGDEF domain AM474_RS13925 d296b92d80a4395361cd5de924acda27 235 Gene3D G3DSA:3.30.70.270 43 221 1.0E-53 T 29-03-2018 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 Gene3D G3DSA:1.10.10.10 1 140 3.4E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.4E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.4E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.4E-6 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 SMART SM00347 29 129 3.2E-18 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 Pfam PF01047 MarR family 36 93 4.0E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS27190 388d096847fcb6595abfc12eb4fe8038 140 SUPERFAMILY SSF46785 2 139 1.85E-32 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26985 d52583a26e0cb37b983888230059aaa3 436 Gene3D G3DSA:3.40.50.720 36 399 8.4E-31 T 29-03-2018 AM474_RS26985 d52583a26e0cb37b983888230059aaa3 436 Pfam PF01266 FAD dependent oxidoreductase 38 391 5.4E-51 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS26985 d52583a26e0cb37b983888230059aaa3 436 SUPERFAMILY SSF51905 355 413 1.94E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS26985 d52583a26e0cb37b983888230059aaa3 436 SUPERFAMILY SSF51905 37 264 1.94E-36 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS23300 d6152b83507542f4580fd028c86bba8e 881 Gene3D G3DSA:3.40.630.30 672 847 2.5E-16 T 29-03-2018 AM474_RS23300 d6152b83507542f4580fd028c86bba8e 881 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 42 329 4.4E-16 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM474_RS23300 d6152b83507542f4580fd028c86bba8e 881 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 566 853 6.4E-93 T 29-03-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal AM474_RS23300 d6152b83507542f4580fd028c86bba8e 881 SUPERFAMILY SSF55729 676 851 7.84E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 Pfam PF03466 LysR substrate binding domain 99 306 3.8E-31 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 Gene3D G3DSA:3.40.190.10 99 187 3.9E-17 T 29-03-2018 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 SUPERFAMILY SSF53850 100 311 2.9E-31 T 29-03-2018 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 SUPERFAMILY SSF46785 12 122 8.86E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 2.7E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 2.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 2.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 2.5E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 Gene3D G3DSA:3.40.190.10 188 277 9.8E-11 T 29-03-2018 AM474_RS03790 428de4c8a95fa3f7a938450b93d0a00c 329 Gene3D G3DSA:1.10.10.10 9 95 8.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17580 8534c0aa60900f7f772e11fdb078338d 560 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 75 243 2.3E-65 T 29-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AM474_RS17580 8534c0aa60900f7f772e11fdb078338d 560 SUPERFAMILY SSF53474 201 492 6.01E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17580 8534c0aa60900f7f772e11fdb078338d 560 TIGRFAM TIGR01839 PHA_synth_II: poly(R)-hydroxyalkanoic acid synthase, class II 1 560 0.0 T 29-03-2018 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II GO:0016746|GO:0042619 AM474_RS17580 8534c0aa60900f7f772e11fdb078338d 560 Gene3D G3DSA:3.40.50.1820 203 531 9.0E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 SUPERFAMILY SSF75217 1 154 1.1E-47 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 4.4E-61 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.6E-47 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.112 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 PIRSF PIRSF004505 1 155 7.8E-42 T 29-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AM474_RS09890 d26fd1278364cd248ecc39fafeb99043 155 Gene3D G3DSA:3.40.1280.10 1 155 2.2E-49 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS20930 e0c4ffc0c45f6dca0e492e43b7d428ce 589 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 31 586 1.8E-252 T 29-03-2018 IPR018671 Protein of unknown function DUF2138 AM474_RS19705 1b3536f4a9e697b339d24952a239a103 115 Gene3D G3DSA:2.102.10.10 4 115 1.0E-22 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS19705 1b3536f4a9e697b339d24952a239a103 115 Pfam PF00355 Rieske [2Fe-2S] domain 11 94 1.1E-11 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS19705 1b3536f4a9e697b339d24952a239a103 115 SUPERFAMILY SSF50022 10 114 1.01E-25 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS14320 0b8cf68ca1d7a31cc6feabe0795bcbab 144 Pfam PF08786 DcrB 8 136 3.3E-34 T 29-03-2018 IPR014894 Protein DcrB AM474_RS14320 0b8cf68ca1d7a31cc6feabe0795bcbab 144 Gene3D G3DSA:3.40.1000.10 1 144 2.5E-23 T 29-03-2018 AM474_RS14320 0b8cf68ca1d7a31cc6feabe0795bcbab 144 SUPERFAMILY SSF55724 2 141 3.98E-47 T 29-03-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 AM474_RS22375 1a7241ea514a5d0aa884ecc2aee5dc2a 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 7 481 5.9E-237 T 29-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 AM474_RS22375 1a7241ea514a5d0aa884ecc2aee5dc2a 502 Pfam PF00171 Aldehyde dehydrogenase family 13 477 1.1E-138 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS22375 1a7241ea514a5d0aa884ecc2aee5dc2a 502 Gene3D G3DSA:3.40.605.10 1 263 3.9E-87 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS22375 1a7241ea514a5d0aa884ecc2aee5dc2a 502 SUPERFAMILY SSF53720 4 483 3.27E-147 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS22375 1a7241ea514a5d0aa884ecc2aee5dc2a 502 Gene3D G3DSA:3.40.309.10 264 459 5.9E-58 T 29-03-2018 AM474_RS04770 f03a55b0de50664762580258dde70547 403 SUPERFAMILY SSF53383 41 401 1.29E-122 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS04770 f03a55b0de50664762580258dde70547 403 PIRSF PIRSF001434 7 403 1.9E-134 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS04770 f03a55b0de50664762580258dde70547 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS04770 f03a55b0de50664762580258dde70547 403 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 21 401 54.903 T 29-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 AM474_RS04770 f03a55b0de50664762580258dde70547 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 2.7E-203 T 29-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 AM474_RS04770 f03a55b0de50664762580258dde70547 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 3.6E-144 T 29-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM474_RS04770 f03a55b0de50664762580258dde70547 403 Gene3D G3DSA:3.90.1150.10 269 403 1.9E-50 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS04770 f03a55b0de50664762580258dde70547 403 Gene3D G3DSA:3.40.640.10 17 268 1.4E-63 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS06485 e6b515a67211ca258190ec3bf067ae9e 365 SUPERFAMILY SSF52518 30 352 1.97E-96 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS06485 e6b515a67211ca258190ec3bf067ae9e 365 Gene3D G3DSA:3.40.50.970 2 351 6.5E-84 T 29-03-2018 AM474_RS06485 e6b515a67211ca258190ec3bf067ae9e 365 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 10 350 1.6E-141 T 29-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM474_RS06485 e6b515a67211ca258190ec3bf067ae9e 365 Pfam PF00676 Dehydrogenase E1 component 38 323 1.1E-80 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM474_RS17330 48d9560c22e92146cd41baf711d5f199 85 Pfam PF04355 SmpA / OmlA family 22 47 6.2E-6 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM474_RS17330 48d9560c22e92146cd41baf711d5f199 85 Gene3D G3DSA:3.30.1450.10 14 85 7.5E-17 T 29-03-2018 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 1.0E-47 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 SUPERFAMILY SSF89919 2 106 1.83E-35 T 29-03-2018 IPR023799 Ribosome-binding factor A domain AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 Pfam PF02033 Ribosome-binding factor A 7 112 2.1E-32 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 29-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 3.6E-34 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 23.242 T 29-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM474_RS19530 916bf1fdf1f0eb815e396ff44440f669 129 Gene3D G3DSA:3.30.300.20 5 119 1.7E-37 T 29-03-2018 IPR015946 K homology domain-like, alpha/beta AM474_RS16295 ecde048ef575456761d4e00ccc47b439 117 SUPERFAMILY SSF55298 9 117 5.97E-33 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS16295 ecde048ef575456761d4e00ccc47b439 117 Gene3D G3DSA:3.30.1330.40 2 117 7.0E-32 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS16295 ecde048ef575456761d4e00ccc47b439 117 Pfam PF01042 Endoribonuclease L-PSP 9 115 8.2E-25 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS06460 137893beae7a1acd36d0669a92f3c588 88 Gene3D G3DSA:1.10.10.710 20 80 1.9E-26 T 29-03-2018 AM474_RS06460 137893beae7a1acd36d0669a92f3c588 88 Pfam PF07130 YebG protein 1 72 2.6E-26 T 29-03-2018 IPR009813 Uncharacterised protein family YebG AM474_RS20910 a1850f55ea833a93d3e8d7c38be761f1 236 Pfam PF04402 Protein of unknown function (DUF541) 32 227 1.6E-26 T 29-03-2018 IPR007497 Protein of unknown function DUF541 AM474_RS11535 905ea0182c5d792e0688992c17f47d86 295 PIRSF PIRSF020481 1 295 1.9E-130 T 29-03-2018 IPR014507 Baseplate assembly protein J, predicted AM474_RS11535 905ea0182c5d792e0688992c17f47d86 295 Pfam PF04865 Baseplate J-like protein 111 252 1.8E-23 T 29-03-2018 IPR006949 Baseplate protein J-like AM474_RS28715 aacce7d5416151b73860bba0205b1581 132 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 121 1.4E-29 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS28715 aacce7d5416151b73860bba0205b1581 132 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 18.76 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM474_RS14350 7fa439856f827fb42edfd906d73a1b12 348 Pfam PF06996 Type VI secretion, TssG 21 319 1.9E-107 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS14350 7fa439856f827fb42edfd906d73a1b12 348 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 22 319 9.7E-111 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Gene3D G3DSA:3.10.310.10 127 263 6.4E-52 T 29-03-2018 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.6E-90 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 40.32 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Gene3D G3DSA:3.10.310.10 1 126 2.1E-48 T 29-03-2018 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 SUPERFAMILY SSF54506 3 276 6.29E-52 T 29-03-2018 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 29-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Pfam PF01678 Diaminopimelate epimerase 5 125 3.8E-33 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM474_RS16425 9eb7ed528a1ac67628bdfc0f1ab46ab2 276 Pfam PF01678 Diaminopimelate epimerase 154 269 5.3E-27 T 29-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM474_RS05010 75598553eda3650b3843cea9878eae72 411 Pfam PF01943 Polysaccharide biosynthesis protein 4 272 1.9E-23 T 29-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 Gene3D G3DSA:3.10.20.30 1 73 2.1E-24 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 SUPERFAMILY SSF54292 2 76 1.27E-25 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 Gene3D G3DSA:1.10.150.120 74 156 3.1E-28 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 Pfam PF01799 [2Fe-2S] binding domain 72 144 4.2E-25 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 59 6.8E-7 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS31490 ea0284e77a5f6d02baefb69737c516df 156 SUPERFAMILY SSF47741 83 152 6.28E-29 T 29-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AM474_RS17360 7e4e532a14d7514c07004fd362bf0a74 312 Pfam PF00487 Fatty acid desaturase 49 282 8.5E-33 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS16885 9e330f4370d2ca0420e0b67247be4321 200 SUPERFAMILY SSF55469 1 195 5.1E-50 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS16885 9e330f4370d2ca0420e0b67247be4321 200 Pfam PF00881 Nitroreductase family 7 177 6.4E-34 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS16885 9e330f4370d2ca0420e0b67247be4321 200 Gene3D G3DSA:3.40.109.10 2 200 8.8E-43 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS16850 3b973cf4e9e0698567d7fb7d727f9106 166 SUPERFAMILY SSF50630 9 143 9.64E-42 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS16850 3b973cf4e9e0698567d7fb7d727f9106 166 Gene3D G3DSA:2.40.70.10 7 136 1.8E-38 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS16850 3b973cf4e9e0698567d7fb7d727f9106 166 Pfam PF05618 Putative ATP-dependant zinc protease 9 146 5.2E-48 T 29-03-2018 AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 SUPERFAMILY SSF51556 3 258 1.45E-79 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 Gene3D G3DSA:3.20.20.140 1 259 1.7E-77 T 29-03-2018 AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 29-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 Pfam PF01026 TatD related DNase 4 256 2.2E-66 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS07150 c93ae1a6db61a01946d996340d62cd3d 259 PIRSF PIRSF005902 1 259 4.2E-70 T 29-03-2018 IPR001130 TatD family GO:0016788 AM474_RS15680 7fffbac0136ff8fef594b3df5008f715 211 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 52 204 8.2E-62 T 29-03-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS15680 7fffbac0136ff8fef594b3df5008f715 211 SUPERFAMILY SSF103025 84 209 4.91E-21 T 29-03-2018 AM474_RS15680 7fffbac0136ff8fef594b3df5008f715 211 Pfam PF04268 Sarcosine oxidase, gamma subunit family 53 204 3.2E-59 T 29-03-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 AM474_RS15680 7fffbac0136ff8fef594b3df5008f715 211 Gene3D G3DSA:3.30.70.1520 46 127 6.9E-22 T 29-03-2018 AM474_RS25490 612541088c4a6c5abcf51e737546bcb8 149 SUPERFAMILY SSF46785 12 146 5.82E-30 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25490 612541088c4a6c5abcf51e737546bcb8 149 Gene3D G3DSA:1.10.10.10 7 149 7.1E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25490 612541088c4a6c5abcf51e737546bcb8 149 Pfam PF12802 MarR family 42 98 2.2E-10 T 29-03-2018 AM474_RS25490 612541088c4a6c5abcf51e737546bcb8 149 SMART SM00347 36 135 5.8E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS25090 fafd531a589903919758b36bd39088a1 385 Gene3D G3DSA:2.40.40.10 23 245 2.6E-36 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS25090 fafd531a589903919758b36bd39088a1 385 Gene3D G3DSA:2.40.40.10 246 383 2.2E-34 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS25090 fafd531a589903919758b36bd39088a1 385 Pfam PF03562 MltA specific insert domain 55 280 3.7E-76 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM474_RS25090 fafd531a589903919758b36bd39088a1 385 Pfam PF06725 3D domain 303 375 1.2E-23 T 29-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AM474_RS25090 fafd531a589903919758b36bd39088a1 385 PIRSF PIRSF019422 4 383 2.5E-118 T 29-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AM474_RS25090 fafd531a589903919758b36bd39088a1 385 SUPERFAMILY SSF50685 41 380 2.89E-125 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS25090 fafd531a589903919758b36bd39088a1 385 SMART SM00925 126 281 1.4E-85 T 29-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 Gene3D G3DSA:1.10.357.10 53 181 3.9E-26 T 29-03-2018 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 Gene3D G3DSA:1.10.10.60 2 52 4.3E-18 T 29-03-2018 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 SUPERFAMILY SSF46689 3 76 3.54E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 SUPERFAMILY SSF48498 76 180 6.67E-14 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.1E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04390 5889eb2928f2b25dce642cf5f4731c74 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 2.4E-15 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS32330 5761763cd0821e3730d44bea081b2072 374 Pfam PF00155 Aminotransferase class I and II 59 358 3.8E-37 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS32330 5761763cd0821e3730d44bea081b2072 374 SUPERFAMILY SSF53383 42 363 3.24E-62 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS32330 5761763cd0821e3730d44bea081b2072 374 Gene3D G3DSA:3.40.640.10 62 280 2.1E-36 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS32330 5761763cd0821e3730d44bea081b2072 374 Gene3D G3DSA:3.90.1150.10 281 366 1.7E-10 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS29110 9fd989cee78e6858ef4218548d75e736 238 Gene3D G3DSA:2.40.50.140 12 79 8.8E-15 T 29-03-2018 AM474_RS29110 9fd989cee78e6858ef4218548d75e736 238 ProSitePatterns PS00352 'Cold-shock' domain signature. 27 46 - T 29-03-2018 IPR019844 Cold-shock conserved site AM474_RS29110 9fd989cee78e6858ef4218548d75e736 238 SUPERFAMILY SSF50249 11 76 5.88E-13 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS29110 9fd989cee78e6858ef4218548d75e736 238 Pfam PF06961 Protein of unknown function (DUF1294) 151 205 2.1E-23 T 29-03-2018 IPR010718 Protein of unknown function DUF1294 AM474_RS29110 9fd989cee78e6858ef4218548d75e736 238 Pfam PF00313 'Cold-shock' DNA-binding domain 20 71 3.9E-9 T 29-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM474_RS13875 9d61b2673483b9b517d6fe068afb1581 121 Pfam PF00072 Response regulator receiver domain 5 115 1.9E-29 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13875 9d61b2673483b9b517d6fe068afb1581 121 SMART SM00448 3 116 1.6E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS13875 9d61b2673483b9b517d6fe068afb1581 121 SUPERFAMILY SSF52172 3 120 4.27E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS13875 9d61b2673483b9b517d6fe068afb1581 121 Gene3D G3DSA:3.40.50.2300 2 121 9.7E-37 T 29-03-2018 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 SUPERFAMILY SSF52768 2 341 1.1E-85 T 29-03-2018 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 1.3E-12 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 1.3E-12 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 1.3E-12 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 Gene3D G3DSA:3.40.800.20 1 342 2.1E-79 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS13130 b79f606b93b86f80a9881c7d548ce9b4 344 Pfam PF00850 Histone deacetylase domain 28 336 5.1E-61 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 52 71 4.9E-9 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 83 107 4.9E-9 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 248 268 4.9E-9 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 PRINTS PR01035 Tetracycline resistance protein signature 141 163 4.9E-9 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 Pfam PF07690 Major Facilitator Superfamily 21 303 2.7E-35 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 Gene3D G3DSA:1.20.1250.20 6 199 8.3E-30 T 29-03-2018 AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 SUPERFAMILY SSF103473 6 387 2.22E-54 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS15000 88ce3cf90b4c0b295befcb0e1684f462 401 Gene3D G3DSA:1.20.1250.20 202 385 1.0E-13 T 29-03-2018 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 PIRSF PIRSF000156 1 882 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52922 694 880 1.17E-63 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.970 51 464 1.8E-84 T 29-03-2018 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.970 465 698 1.6E-68 T 29-03-2018 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52518 52 460 6.59E-140 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 123 287 4.2E-8 T 29-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 Gene3D G3DSA:3.40.50.920 699 882 4.1E-43 T 29-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 2 880 0.0 T 29-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 AM474_RS18095 f06b8e008d9f7d67ad4bbcde6468126f 882 SUPERFAMILY SSF52518 466 693 2.94E-97 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS03710 2bb6b7a3b5abb5043e0856181e6c4a10 208 Pfam PF02570 Precorrin-8X methylmutase 11 205 4.2E-73 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM474_RS03710 2bb6b7a3b5abb5043e0856181e6c4a10 208 SUPERFAMILY SSF63965 1 205 3.14E-74 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM474_RS03710 2bb6b7a3b5abb5043e0856181e6c4a10 208 Gene3D G3DSA:3.40.50.10230 2 208 1.1E-80 T 29-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 Gene3D G3DSA:3.40.50.720 137 306 1.1E-46 T 29-03-2018 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 139 249 1.9E-20 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 140 473 3.2E-111 T 29-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 SMART SM00846 138 299 5.1E-53 T 29-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 304 461 1.2E-47 T 29-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 297 304 - T 29-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 SUPERFAMILY SSF55347 299 462 2.44E-55 T 29-03-2018 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 257 270 1.2E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 320 336 1.2E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 418 433 1.2E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 376 393 1.2E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 293 311 1.2E-18 T 29-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 SUPERFAMILY SSF51735 139 315 8.05E-46 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04215 0efeb4a48ae49bd21d68d466869efdd2 488 Gene3D G3DSA:3.30.360.10 307 463 1.2E-51 T 29-03-2018 AM474_RS04300 9601a574169072103f80d7c4f1450863 145 Pfam PF00582 Universal stress protein family 3 141 1.3E-33 T 29-03-2018 IPR006016 UspA GO:0006950 AM474_RS04300 9601a574169072103f80d7c4f1450863 145 SUPERFAMILY SSF52402 3 141 1.93E-36 T 29-03-2018 AM474_RS04300 9601a574169072103f80d7c4f1450863 145 PIRSF PIRSF006276 1 144 1.3E-48 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS04300 9601a574169072103f80d7c4f1450863 145 Gene3D G3DSA:3.40.50.620 2 145 2.4E-36 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS04300 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 119 141 4.6E-14 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS04300 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 3 21 4.6E-14 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS04300 9601a574169072103f80d7c4f1450863 145 PRINTS PR01438 Universal stress protein signature 102 114 4.6E-14 T 29-03-2018 IPR006015 Universal stress protein A AM474_RS18395 047f4679c3ee5444872ee47aa33e3d5d 289 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 12 287 50.31 T 29-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM474_RS18395 047f4679c3ee5444872ee47aa33e3d5d 289 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 285 7.2E-80 T 29-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM474_RS18395 047f4679c3ee5444872ee47aa33e3d5d 289 Pfam PF02666 Phosphatidylserine decarboxylase 65 283 3.5E-60 T 29-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM474_RS05615 0791ea0176cf182a8794c5668d3eaa9a 306 Pfam PF04381 Putative exonuclease, RdgC 1 300 3.6E-115 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM474_RS05615 0791ea0176cf182a8794c5668d3eaa9a 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 44.877 T 29-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 AM474_RS11775 43a8f9f2a18d4394629c724fad596a77 315 Gene3D G3DSA:1.10.443.10 101 314 1.7E-10 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS11775 43a8f9f2a18d4394629c724fad596a77 315 Gene3D G3DSA:1.10.150.130 6 98 1.5E-4 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS11775 43a8f9f2a18d4394629c724fad596a77 315 Pfam PF12834 Phage integrase, N-terminal 1 91 2.0E-18 T 29-03-2018 IPR024457 Putative integrase, N-terminal AM474_RS11775 43a8f9f2a18d4394629c724fad596a77 315 Pfam PF12835 Integrase 108 234 4.3E-12 T 29-03-2018 IPR024456 Integrase catalytic domain, putative AM474_RS11775 43a8f9f2a18d4394629c724fad596a77 315 SUPERFAMILY SSF56349 15 236 5.49E-14 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS32370 b4c4ff60c61227e063aea620852f8930 437 SUPERFAMILY SSF52799 284 417 4.9E-20 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM474_RS32370 b4c4ff60c61227e063aea620852f8930 437 Gene3D G3DSA:3.90.190.10 286 426 1.6E-17 T 29-03-2018 IPR029021 Protein-tyrosine phosphatase-like AM474_RS32370 b4c4ff60c61227e063aea620852f8930 437 SMART SM00195 290 423 1.4E-7 T 29-03-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 AM474_RS32370 b4c4ff60c61227e063aea620852f8930 437 Pfam PF00782 Dual specificity phosphatase, catalytic domain 309 418 3.6E-9 T 29-03-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 AM474_RS32370 b4c4ff60c61227e063aea620852f8930 437 Gene3D G3DSA:1.20.144.10 33 203 9.4E-4 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS28725 cc7b7ba9bec20ac964e90f3ed2e2df6a 177 SUPERFAMILY SSF55729 1 173 3.88E-28 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS28725 cc7b7ba9bec20ac964e90f3ed2e2df6a 177 Pfam PF13673 Acetyltransferase (GNAT) domain 60 151 1.7E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS28725 cc7b7ba9bec20ac964e90f3ed2e2df6a 177 Gene3D G3DSA:3.40.630.30 1 177 4.4E-33 T 29-03-2018 AM474_RS05250 24b216021b420ea743299ed75353efb6 295 SUPERFAMILY SSF89550 168 276 4.12E-50 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM474_RS05250 24b216021b420ea743299ed75353efb6 295 SUPERFAMILY SSF89550 1 81 4.12E-50 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM474_RS05250 24b216021b420ea743299ed75353efb6 295 Gene3D G3DSA:3.20.20.140 1 267 1.0E-41 T 29-03-2018 AM474_RS05250 24b216021b420ea743299ed75353efb6 295 Pfam PF02811 PHP domain 4 71 4.3E-10 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM474_RS05250 24b216021b420ea743299ed75353efb6 295 SMART SM00481 3 68 1.1E-17 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 155 173 - T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 SUPERFAMILY SSF55920 1 242 5.63E-83 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 237 1.4E-90 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 Hamap MF_01974 Methionine aminopeptidase [map]. 1 238 35.663 T 29-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 180 192 1.3E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 149 161 1.3E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 56 69 1.3E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 79 95 1.3E-20 T 29-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 Gene3D G3DSA:3.90.230.10 1 249 4.1E-77 T 29-03-2018 AM474_RS01675 45b8559537ab2bce9dc79aa3d3cabfcc 250 Pfam PF00557 Metallopeptidase family M24 1 229 6.1E-51 T 29-03-2018 IPR000994 Peptidase M24 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00304 168 221 1.3E-4 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 431 1.6E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00672 HAMP domain 168 217 2.5E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 5.2E-14 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00388 222 282 5.6E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 SMART SM00387 320 432 1.3E-25 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 278 6.7E-12 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:1.10.287.130 212 278 1.3E-14 T 29-03-2018 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF47384 206 279 5.1E-14 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 Gene3D G3DSA:3.30.565.10 284 432 1.4E-31 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS16835 d0430ba83b1c660afa5b54b31c262c3a 439 SUPERFAMILY SSF55874 284 431 2.49E-32 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS07370 bf99cc12e775f80ccec2f67b9b2fef46 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM474_RS07370 bf99cc12e775f80ccec2f67b9b2fef46 123 Gene3D G3DSA:1.10.3830.10 11 123 2.6E-38 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM474_RS07370 bf99cc12e775f80ccec2f67b9b2fef46 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 20 121 3.0E-32 T 29-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 366 62.802 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 364 6.3E-117 T 29-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 SUPERFAMILY SSF53383 17 366 4.31E-81 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 Gene3D G3DSA:3.40.640.10 50 260 4.4E-39 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 226 235 - T 29-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 Gene3D G3DSA:3.90.1150.10 261 368 5.7E-26 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS05055 a62148e47dd91d8207fd09d5ee102d4c 369 Pfam PF00155 Aminotransferase class I and II 38 362 3.2E-50 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS22510 044a3c8b57a6c1120c90c1a535d8f9f8 248 Gene3D G3DSA:3.20.20.70 7 241 2.4E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS22510 044a3c8b57a6c1120c90c1a535d8f9f8 248 SUPERFAMILY SSF63892 7 242 6.15E-97 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM474_RS22510 044a3c8b57a6c1120c90c1a535d8f9f8 248 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.4E-96 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM474_RS22510 044a3c8b57a6c1120c90c1a535d8f9f8 248 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 248 127.619 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM474_RS22510 044a3c8b57a6c1120c90c1a535d8f9f8 248 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 8.9E-102 T 29-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM474_RS13145 7ecf07cddf9b19006018c4eefa038d4c 221 Gene3D G3DSA:3.90.850.10 2 221 9.0E-69 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS13145 7ecf07cddf9b19006018c4eefa038d4c 221 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 20 220 5.7E-54 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS13145 7ecf07cddf9b19006018c4eefa038d4c 221 SUPERFAMILY SSF56529 12 220 1.26E-65 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 73.698 T 29-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 8.7E-28 T 29-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 Pfam PF01938 TRAM domain 378 441 1.0E-19 T 29-03-2018 IPR002792 TRAM domain AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-28 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.5E-185 T 29-03-2018 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 SMART SM00729 147 367 3.4E-58 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 SUPERFAMILY SSF102114 125 375 2.62E-61 T 29-03-2018 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 Gene3D G3DSA:3.80.30.20 144 381 2.9E-51 T 29-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 29-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM474_RS09775 c5b818880f98b35f956258f84429ea24 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 7.4E-150 T 29-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM474_RS22360 7243809d858d2411303d4697f2db3422 367 SUPERFAMILY SSF52096 264 340 1.36E-58 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS22360 7243809d858d2411303d4697f2db3422 367 SUPERFAMILY SSF52096 15 193 1.36E-58 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS22360 7243809d858d2411303d4697f2db3422 367 Gene3D G3DSA:3.90.226.10 6 348 8.1E-78 T 29-03-2018 AM474_RS22360 7243809d858d2411303d4697f2db3422 367 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 354 1.4E-110 T 29-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AM474_RS20015 8f07b90ed23b7f6662aff375794effac 299 Pfam PF13411 MerR HTH family regulatory protein 12 78 8.5E-18 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS20015 8f07b90ed23b7f6662aff375794effac 299 SMART SM00422 11 80 1.8E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS20015 8f07b90ed23b7f6662aff375794effac 299 SUPERFAMILY SSF46955 12 109 8.24E-21 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS20015 8f07b90ed23b7f6662aff375794effac 299 Gene3D G3DSA:1.10.1660.10 2 144 2.8E-24 T 29-03-2018 AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 8.8E-16 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.10.10.10 7 82 7.9E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF46785 13 108 8.81E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 Pfam PF07729 FCD domain 90 216 7.0E-30 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 Gene3D G3DSA:1.20.120.530 83 238 7.3E-38 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00895 90 217 2.3E-26 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 SUPERFAMILY SSF48008 87 224 1.2E-28 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS22640 9118ca874e0d3f6b4ad49f812455bcfa 240 SMART SM00345 22 80 1.7E-13 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS28955 4fc7697674a1cb1b66aa885bbcf3e004 189 SUPERFAMILY SSF55729 12 184 8.16E-39 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS28955 4fc7697674a1cb1b66aa885bbcf3e004 189 Gene3D G3DSA:3.40.630.30 4 187 1.6E-24 T 29-03-2018 AM474_RS28955 4fc7697674a1cb1b66aa885bbcf3e004 189 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 5.8E-18 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS25195 2cb8de8e473040e708caad7795fa5dcc 294 Pfam PF12146 Serine aminopeptidase, S33 46 125 1.0E-9 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS25195 2cb8de8e473040e708caad7795fa5dcc 294 SUPERFAMILY SSF53474 9 151 1.88E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25195 2cb8de8e473040e708caad7795fa5dcc 294 SUPERFAMILY SSF53474 186 290 1.88E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25195 2cb8de8e473040e708caad7795fa5dcc 294 PIRSF PIRSF037442 6 294 4.6E-94 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AM474_RS25195 2cb8de8e473040e708caad7795fa5dcc 294 Gene3D G3DSA:3.40.50.1820 3 290 6.2E-34 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 SUPERFAMILY SSF110849 36 180 1.15E-34 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 SMART SM00470 37 127 5.3E-39 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 Gene3D G3DSA:3.90.1530.10 24 127 1.7E-38 T 29-03-2018 AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 Gene3D G3DSA:1.10.10.10 163 281 0.0013 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 Gene3D G3DSA:1.10.10.730 128 162 5.6E-19 T 29-03-2018 AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 Pfam PF02195 ParB-like nuclease domain 38 127 4.0E-30 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS14930 43aa57aaf5bbd888e26617876d6c8e34 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 204 7.4E-64 T 29-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM474_RS00825 3d396c073fde7e37932e78b32b9c6edf 360 SUPERFAMILY SSF51679 12 350 2.88E-80 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS00825 3d396c073fde7e37932e78b32b9c6edf 360 Pfam PF00296 Luciferase-like monooxygenase 21 322 1.2E-76 T 29-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AM474_RS00825 3d396c073fde7e37932e78b32b9c6edf 360 Gene3D G3DSA:3.20.20.30 1 359 7.2E-76 T 29-03-2018 AM474_RS16905 15db16cda47772e2ce098b2a30fa01f1 387 SUPERFAMILY SSF56796 2 387 3.01E-115 T 29-03-2018 AM474_RS16905 15db16cda47772e2ce098b2a30fa01f1 387 Gene3D G3DSA:3.40.50.1970 1 185 5.8E-43 T 29-03-2018 AM474_RS16905 15db16cda47772e2ce098b2a30fa01f1 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 378 2.4E-114 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM474_RS16905 15db16cda47772e2ce098b2a30fa01f1 387 Gene3D G3DSA:1.20.1090.10 186 387 1.6E-63 T 29-03-2018 AM474_RS16905 15db16cda47772e2ce098b2a30fa01f1 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 Pfam PF07690 Major Facilitator Superfamily 19 387 8.6E-17 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 Gene3D G3DSA:1.20.1250.20 1 202 2.8E-9 T 29-03-2018 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 SUPERFAMILY SSF69593 385 573 2.62E-28 T 29-03-2018 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 Gene3D G3DSA:1.20.1250.20 221 420 1.5E-16 T 29-03-2018 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 SUPERFAMILY SSF103473 12 426 2.49E-26 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 Pfam PF01553 Acyltransferase 443 570 1.5E-23 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 Gene3D G3DSA:3.40.1130.10 421 620 4.3E-35 T 29-03-2018 AM474_RS05635 7ce95685ade5cbb40c301623aeb2384b 624 SMART SM00563 457 573 3.5E-28 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS10055 1b11d8536e35cf8f37c97ceaadde1700 308 Pfam PF00005 ABC transporter 18 160 2.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS10055 1b11d8536e35cf8f37c97ceaadde1700 308 SMART SM00382 26 210 5.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS10055 1b11d8536e35cf8f37c97ceaadde1700 308 SUPERFAMILY SSF52540 2 224 1.2E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS10055 1b11d8536e35cf8f37c97ceaadde1700 308 Gene3D G3DSA:3.40.50.300 1 251 9.2E-61 T 29-03-2018 AM474_RS23780 33e0ddc53e0a3e544d6e003c8b971d66 134 Gene3D G3DSA:3.10.129.10 1 134 4.3E-20 T 29-03-2018 AM474_RS23780 33e0ddc53e0a3e544d6e003c8b971d66 134 SUPERFAMILY SSF54637 2 133 6.08E-30 T 29-03-2018 IPR029069 HotDog domain AM474_RS23780 33e0ddc53e0a3e544d6e003c8b971d66 134 Pfam PF03061 Thioesterase superfamily 20 105 2.0E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS21250 782f88f8389411e71ec36512086af93c 135 PIRSF PIRSF005276 1 135 2.8E-55 T 29-03-2018 IPR007481 Stringent starvation protein B AM474_RS21250 782f88f8389411e71ec36512086af93c 135 Pfam PF04386 Stringent starvation protein B 4 135 4.1E-35 T 29-03-2018 IPR007481 Stringent starvation protein B AM474_RS21250 782f88f8389411e71ec36512086af93c 135 SUPERFAMILY SSF101738 1 114 1.31E-47 T 29-03-2018 IPR007481 Stringent starvation protein B AM474_RS21250 782f88f8389411e71ec36512086af93c 135 Gene3D G3DSA:2.30.30.220 5 102 1.0E-39 T 29-03-2018 IPR007481 Stringent starvation protein B AM474_RS26845 183bfb13e0687f924952352a4dc5e115 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 35.233 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM474_RS26845 183bfb13e0687f924952352a4dc5e115 182 SUPERFAMILY SSF53271 5 177 6.03E-49 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS26845 183bfb13e0687f924952352a4dc5e115 182 Pfam PF00156 Phosphoribosyl transferase domain 48 157 1.4E-12 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS26845 183bfb13e0687f924952352a4dc5e115 182 Gene3D G3DSA:3.40.50.2020 1 180 4.9E-39 T 29-03-2018 AM474_RS26845 183bfb13e0687f924952352a4dc5e115 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 8 175 1.1E-58 T 29-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AM474_RS29870 4749f681d2ecf33ef1805c7337d749e6 423 Pfam PF07690 Major Facilitator Superfamily 35 289 3.0E-31 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS29870 4749f681d2ecf33ef1805c7337d749e6 423 Gene3D G3DSA:1.20.1250.20 18 216 9.1E-35 T 29-03-2018 AM474_RS29870 4749f681d2ecf33ef1805c7337d749e6 423 SUPERFAMILY SSF103473 20 422 1.07E-73 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29870 4749f681d2ecf33ef1805c7337d749e6 423 Gene3D G3DSA:1.20.1250.20 217 423 6.3E-25 T 29-03-2018 AM474_RS29870 4749f681d2ecf33ef1805c7337d749e6 423 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS24435 93885bd433c6496b785aecf8bd467faa 237 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 236 3.5E-73 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AM474_RS24435 93885bd433c6496b785aecf8bd467faa 237 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 55 224 6.9E-14 T 29-03-2018 IPR010239 Conserved hypothetical protein CHP02001 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00072 Response regulator receiver domain 11 125 2.5E-11 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.5E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF46894 141 204 3.74E-15 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 Gene3D G3DSA:3.40.50.2300 10 147 1.6E-13 T 29-03-2018 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00421 146 203 1.3E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 SUPERFAMILY SSF52172 10 137 3.95E-13 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 4.1E-14 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 Gene3D G3DSA:1.10.10.10 148 208 2.7E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03680 5127963adc56ad285192ccb8a1ecdbc4 212 SMART SM00448 8 125 2.3E-5 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS31995 c3193b4a028ba59f633c7712ddd763a6 353 Pfam PF07883 Cupin domain 93 164 1.3E-24 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS31995 c3193b4a028ba59f633c7712ddd763a6 353 Gene3D G3DSA:2.60.120.10 35 351 2.9E-38 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS31995 c3193b4a028ba59f633c7712ddd763a6 353 SUPERFAMILY SSF51182 6 346 7.32E-116 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS31995 c3193b4a028ba59f633c7712ddd763a6 353 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 9 348 3.9E-162 T 29-03-2018 IPR011960 Gentisate 1,2-dioxygenase AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 Gene3D G3DSA:2.40.170.20 164 702 3.6E-44 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 Pfam PF00593 TonB dependent receptor 243 660 1.2E-26 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 Gene3D G3DSA:2.170.130.10 34 163 1.6E-25 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 5.7E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 SUPERFAMILY SSF56935 367 664 3.05E-81 T 29-03-2018 AM474_RS27240 c39afd4423a6952e62bb6ae47dcb72ac 702 SUPERFAMILY SSF56935 37 309 3.05E-81 T 29-03-2018 AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 SUPERFAMILY SSF118196 2 218 2.88E-76 T 29-03-2018 IPR023370 TsaA-like domain AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 Gene3D G3DSA:2.40.30.70 4 143 2.2E-53 T 29-03-2018 IPR023370 TsaA-like domain AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 4 143 1.6E-44 T 29-03-2018 IPR023370 TsaA-like domain AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 Pfam PF01980 Uncharacterised protein family UPF0066 20 138 3.0E-41 T 29-03-2018 IPR023370 TsaA-like domain AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 Gene3D G3DSA:3.30.2310.10 144 226 1.2E-21 T 29-03-2018 AM474_RS06315 2ec0abfca76fd49d59b25103490f6472 231 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 29-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site AM474_RS10210 bf4f0bdd2a948d0d9f3a89e450486358 118 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 115 1.2E-21 T 29-03-2018 IPR007360 Invasion gene expression up-regulator, SirB AM474_RS12080 8be4a8745f41fc9d1c06195fe7758d8e 85 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 6 74 2.0E-12 T 29-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 AM474_RS09770 8e048150e10378ba929df78e280fbb3d 110 Pfam PF08850 Domain of unknown function (DUF1820) 8 103 1.5E-43 T 29-03-2018 IPR014949 Protein of unknown function DUF1820 AM474_RS09770 8e048150e10378ba929df78e280fbb3d 110 PIRSF PIRSF028538 2 109 9.3E-53 T 29-03-2018 IPR014949 Protein of unknown function DUF1820 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 Gene3D G3DSA:3.40.50.720 160 420 5.9E-83 T 29-03-2018 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 SMART SM01274 17 150 2.0E-76 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 354 3.5E-26 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 Gene3D G3DSA:3.40.50.10380 4 159 2.0E-34 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 PIRSF PIRSF000106 45 419 5.1E-72 T 29-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 SUPERFAMILY SSF51735 162 412 1.18E-83 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 SUPERFAMILY SSF53223 9 160 5.47E-51 T 29-03-2018 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 SMART SM00919 162 398 3.8E-144 T 29-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 29-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM474_RS17650 030c9532250e8bae1a2610cbbf37b4d8 422 Pfam PF00390 Malic enzyme, N-terminal domain 19 148 1.8E-25 T 29-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM474_RS06105 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Pfam PF07238 PilZ domain 138 249 1.6E-8 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS06105 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Gene3D G3DSA:2.40.10.220 136 262 1.1E-16 T 29-03-2018 AM474_RS06105 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Gene3D G3DSA:2.30.110.10 30 135 6.4E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS06105 f2a6076aa6d459dfdbc17a7ad8fb9bd1 263 Pfam PF07317 Flagellar regulator YcgR 31 135 7.2E-26 T 29-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 Gene3D G3DSA:1.20.58.130 184 253 0.0068 T 29-03-2018 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 Gene3D G3DSA:2.40.50.100 254 383 2.1E-4 T 29-03-2018 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 Gene3D G3DSA:1.20.5.1000 98 169 4.3E-4 T 29-03-2018 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 272 293 7.1E-15 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 329 7.1E-15 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 7.1E-15 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 401 418 7.1E-15 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 Gene3D G3DSA:2.40.50.100 46 97 7.4E-6 T 29-03-2018 AM474_RS10585 d7c3c9c799dd659dade61ccaa5551c90 418 Pfam PF13437 HlyD family secretion protein 261 389 1.3E-13 T 29-03-2018 AM474_RS25355 bf3d63afa198d518354ff6a85b3c126d 273 SMART SM00062 36 262 2.1E-44 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS25355 bf3d63afa198d518354ff6a85b3c126d 273 Gene3D G3DSA:3.40.190.10 142 216 5.9E-15 T 29-03-2018 AM474_RS25355 bf3d63afa198d518354ff6a85b3c126d 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 260 3.8E-48 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS25355 bf3d63afa198d518354ff6a85b3c126d 273 Gene3D G3DSA:3.40.190.10 26 141 3.0E-27 T 29-03-2018 AM474_RS25355 bf3d63afa198d518354ff6a85b3c126d 273 SUPERFAMILY SSF53850 8 261 2.54E-57 T 29-03-2018 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.9E-141 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.643 T 29-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 4.4E-5 T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 29-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS21315 68fa3879119b1156c358e505e8e16484 360 Pfam PF00953 Glycosyl transferase family 4 99 284 9.7E-37 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 Gene3D G3DSA:3.40.190.10 23 131 1.2E-11 T 29-03-2018 AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 Pfam PF09084 NMT1/THI5 like 66 242 3.3E-16 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 SUPERFAMILY SSF53850 33 256 4.46E-42 T 29-03-2018 AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 309 6.6E-65 T 29-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 Gene3D G3DSA:3.40.190.10 132 314 8.0E-32 T 29-03-2018 AM474_RS00830 82282a46042aba67f07c12969128fdf0 314 SMART SM00062 28 241 0.002 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS22225 cb7e6c1c0ec7c8563afa21bd8c4d405d 300 SUPERFAMILY SSF53448 17 229 1.03E-56 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS22225 cb7e6c1c0ec7c8563afa21bd8c4d405d 300 Gene3D G3DSA:3.90.550.10 3 298 2.1E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS22225 cb7e6c1c0ec7c8563afa21bd8c4d405d 300 Pfam PF00535 Glycosyl transferase family 2 20 179 2.7E-33 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 Gene3D G3DSA:1.10.260.40 1 91 3.6E-13 T 29-03-2018 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 Pfam PF13464 Domain of unknown function (DUF4115) 272 345 7.8E-24 T 29-03-2018 IPR025194 Domain of unknown function DUF4115 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 Pfam PF13413 Helix-turn-helix domain 22 82 1.5E-21 T 29-03-2018 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 32 58 - T 29-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 SUPERFAMILY SSF47413 17 86 3.85E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS08720 ab4a3f0b37408f4f361a0fac31fc4819 347 SMART SM00530 21 82 4.5E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:1.10.260.40 1 55 1.2E-20 T 29-03-2018 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 178 314 6.4E-19 T 29-03-2018 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF47413 2 58 1.41E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 246 1.6E-20 T 29-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 Gene3D G3DSA:3.40.50.2300 56 177 1.6E-35 T 29-03-2018 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 SMART SM00354 1 73 1.8E-28 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 SUPERFAMILY SSF53822 60 315 2.94E-52 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 29-03-2018 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 329 2.6E-132 T 29-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 AM474_RS07145 37f1137a4964c7c016bbfa80b74e4786 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 3.3E-18 T 29-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AM474_RS14585 827626182b5afeaf26d3a2a925d28852 417 Pfam PF02308 MgtC family 11 136 2.0E-18 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS14585 827626182b5afeaf26d3a2a925d28852 417 Pfam PF13194 Domain of unknown function (DUF4010) 184 392 2.9E-61 T 29-03-2018 IPR025105 Domain of unknown function DUF4010 AM474_RS00860 7217a17509ca7dd46210612a8c323a8c 222 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 119 - T 29-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 AM474_RS00860 7217a17509ca7dd46210612a8c323a8c 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 215 3.0E-44 T 29-03-2018 IPR006214 Bax inhibitor 1-related AM474_RS09170 758775f166ea505e856d96a611a694d2 311 Gene3D G3DSA:3.40.190.10 180 302 7.0E-24 T 29-03-2018 AM474_RS09170 758775f166ea505e856d96a611a694d2 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 296 4.0E-69 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS09170 758775f166ea505e856d96a611a694d2 311 Gene3D G3DSA:3.40.190.10 13 179 6.6E-31 T 29-03-2018 AM474_RS09170 758775f166ea505e856d96a611a694d2 311 SUPERFAMILY SSF53850 25 299 1.15E-69 T 29-03-2018 AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 SUPERFAMILY SSF53901 1 251 2.79E-63 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.0E-29 T 29-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 Gene3D G3DSA:3.40.47.10 258 403 1.0E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 SMART SM00825 Beta-ketoacyl synthase 4 405 4.7E-13 T 29-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 Gene3D G3DSA:3.40.47.10 4 257 3.6E-59 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 29-03-2018 IPR018201 Beta-ketoacyl synthase, active site AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 SUPERFAMILY SSF53901 213 403 2.72E-60 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS27220 23c9e74eef828dca01a5eda3dbb07049 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.1E-47 T 29-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 Pfam PF05343 M42 glutamyl aminopeptidase 62 343 1.1E-36 T 29-03-2018 IPR008007 Peptidase M42 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 SUPERFAMILY SSF53187 183 352 4.0E-39 T 29-03-2018 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 SUPERFAMILY SSF53187 7 87 4.0E-39 T 29-03-2018 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 Gene3D G3DSA:3.40.630.10 192 356 2.0E-9 T 29-03-2018 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 PIRSF PIRSF001123 2 357 1.3E-34 T 29-03-2018 IPR008007 Peptidase M42 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 Gene3D G3DSA:2.40.30.40 76 171 5.2E-16 T 29-03-2018 IPR023367 Peptidase M42, domain 2 AM474_RS30200 349d23348fe73da8b13060e0f32dde13 358 SUPERFAMILY SSF101821 78 191 1.83E-9 T 29-03-2018 AM474_RS24945 7839cc5996764f382469e19b37e4a11a 223 SUPERFAMILY SSF48150 37 182 2.12E-39 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM474_RS24945 7839cc5996764f382469e19b37e4a11a 223 Gene3D G3DSA:1.10.340.30 34 150 4.5E-26 T 29-03-2018 AM474_RS24945 7839cc5996764f382469e19b37e4a11a 223 Pfam PF03352 Methyladenine glycosylase 39 132 2.9E-18 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 Pfam PF00771 FHIPEP family 26 696 1.5E-238 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 29-03-2018 IPR025505 FHIPEP conserved site AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PIRSF PIRSF005419 3 706 6.1E-262 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 704 4.7E-298 T 29-03-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS27735 105ddee45d06fbc689ce70577ef7a43b 706 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 3.8E-58 T 29-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 Gene3D G3DSA:3.40.50.2000 1 181 6.1E-10 T 29-03-2018 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 374 2.2E-126 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 Gene3D G3DSA:3.40.50.2000 182 373 4.2E-16 T 29-03-2018 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 SUPERFAMILY SSF53756 6 375 6.6E-38 T 29-03-2018 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 376 43.812 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM474_RS07575 e6a9f95af9becc49544a574101be68dc 378 Pfam PF02684 Lipid-A-disaccharide synthetase 7 360 3.9E-120 T 29-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 AM474_RS13330 9e24c29ec88ddfa43963f5ef4e5e523a 60 Pfam PF10055 Uncharacterized small protein (DUF2292) 17 52 1.2E-17 T 29-03-2018 IPR018743 Protein of unknown function DUF2292 AM474_RS12260 7a52bc91307778ad426979c168e4b52f 298 Pfam PF00892 EamA-like transporter family 8 141 3.3E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS12260 7a52bc91307778ad426979c168e4b52f 298 TIGRFAM TIGR00688 rarD: protein RarD 8 260 4.9E-74 T 29-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 AM474_RS12260 7a52bc91307778ad426979c168e4b52f 298 SUPERFAMILY SSF103481 191 286 3.92E-8 T 29-03-2018 AM474_RS12260 7a52bc91307778ad426979c168e4b52f 298 SUPERFAMILY SSF103481 47 145 3.53E-14 T 29-03-2018 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 SUPERFAMILY SSF82866 209 399 4.71E-25 T 29-03-2018 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 SUPERFAMILY SSF82866 647 798 2.88E-27 T 29-03-2018 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 Pfam PF03176 MMPL family 222 434 5.0E-5 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 Pfam PF03176 MMPL family 495 800 1.2E-10 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 Gene3D G3DSA:1.20.1640.10 203 412 2.0E-26 T 29-03-2018 AM474_RS00515 a4fb2fc4c3b52c6157e41bc4a3d38b5b 832 Gene3D G3DSA:1.20.1640.10 590 809 1.2E-27 T 29-03-2018 AM474_RS15800 6bd61330972c86f0d67696a0b7e86315 156 SUPERFAMILY SSF54427 4 156 1.05E-80 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS15800 6bd61330972c86f0d67696a0b7e86315 156 Pfam PF07080 Protein of unknown function (DUF1348) 9 138 1.3E-67 T 29-03-2018 IPR009783 Protein of unknown function DUF1348 AM474_RS15800 6bd61330972c86f0d67696a0b7e86315 156 Gene3D G3DSA:3.10.450.50 12 156 2.7E-72 T 29-03-2018 AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 SUPERFAMILY SSF54523 38 124 5.49E-22 T 29-03-2018 AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 Pfam PF02501 Type II secretion system (T2SS), protein I 40 125 1.2E-29 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 105 2.6E-45 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 7.1E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 Gene3D G3DSA:3.30.1300.30 31 129 3.4E-29 T 29-03-2018 AM474_RS04730 5933d6f47a397ba70cad6030ace47d48 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 5.3E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS19725 a10a2ccd33de1b405cbcfc333623cf85 327 Gene3D G3DSA:1.10.3470.10 1 327 1.8E-71 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS19725 a10a2ccd33de1b405cbcfc333623cf85 327 SUPERFAMILY SSF81345 2 324 7.06E-81 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS19725 a10a2ccd33de1b405cbcfc333623cf85 327 Pfam PF01032 FecCD transport family 2 324 1.7E-89 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 Gene3D G3DSA:3.40.50.720 180 356 1.2E-24 T 29-03-2018 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 29-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 SMART SM00829 7 379 0.0013 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 Pfam PF00107 Zinc-binding dehydrogenase 189 257 1.2E-11 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 SUPERFAMILY SSF51735 156 346 3.81E-63 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 SUPERFAMILY SSF50129 1 193 2.28E-54 T 29-03-2018 IPR011032 GroES-like AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 4.6E-26 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS30125 3db71eaf536d747f66642435b36c5843 415 Gene3D G3DSA:3.90.180.10 1 179 1.2E-47 T 29-03-2018 AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:3.40.190.10 181 260 1.0E-7 T 29-03-2018 AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:3.40.190.10 94 180 3.2E-12 T 29-03-2018 AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.0E-17 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 Pfam PF03466 LysR substrate binding domain 94 286 6.8E-22 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 SUPERFAMILY SSF46785 3 84 2.43E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 SUPERFAMILY SSF53850 94 287 1.27E-21 T 29-03-2018 AM474_RS25380 b080188ac0d21dde4e3dfb63aa1bc53e 288 Gene3D G3DSA:1.10.10.10 1 90 1.0E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17860 69b7f8386d0891a9d06bb7c724c22da4 128 Gene3D G3DSA:1.10.260.40 19 112 1.7E-14 T 29-03-2018 AM474_RS17860 69b7f8386d0891a9d06bb7c724c22da4 128 SMART SM00530 24 78 5.2E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS17860 69b7f8386d0891a9d06bb7c724c22da4 128 Pfam PF12844 Helix-turn-helix domain 22 71 3.7E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS17860 69b7f8386d0891a9d06bb7c724c22da4 128 SUPERFAMILY SSF47413 20 71 1.13E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-37 T 29-03-2018 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.7E-26 T 29-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 1 75 2.45E-21 T 29-03-2018 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 SUPERFAMILY SSF55021 79 162 2.29E-26 T 29-03-2018 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.260 1 87 2.1E-22 T 29-03-2018 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.6E-63 T 29-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 Gene3D G3DSA:3.30.70.1150 88 160 5.5E-27 T 29-03-2018 AM474_RS19785 ebd7ae86d63b19a944fad84811c3a8e3 163 Pfam PF13710 ACT domain 12 72 3.4E-15 T 29-03-2018 AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 SUPERFAMILY SSF54593 1 126 2.95E-36 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 1.3E-23 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 Gene3D G3DSA:3.10.180.10 1 128 5.5E-37 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 2.3E-65 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS06945 af196df8d06eedce29e3f20b5630819e 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS13095 d3e5555d64201b4f0cc4b22f16903ade 321 SUPERFAMILY SSF50956 25 316 2.88E-57 T 29-03-2018 AM474_RS13095 d3e5555d64201b4f0cc4b22f16903ade 321 Pfam PF06977 SdiA-regulated 63 314 9.4E-107 T 29-03-2018 IPR009722 SdiA-regulated AM474_RS13095 d3e5555d64201b4f0cc4b22f16903ade 321 Gene3D G3DSA:2.120.10.30 59 318 7.3E-13 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 SUPERFAMILY SSF53056 11 227 9.94E-70 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 60 67 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 Pfam PF00484 Carbonic anhydrase 55 210 1.7E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 SMART SM00947 48 215 1.5E-65 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 Gene3D G3DSA:3.40.1050.10 14 234 2.3E-71 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS14280 aa1a0161debafdf2b6375f3e08bfeba8 242 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 103 123 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS24575 073407352fb2240d43f65a3277caac40 325 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 11 291 6.1E-117 T 29-03-2018 IPR006446 Rhamnosyltransferase AM474_RS24575 073407352fb2240d43f65a3277caac40 325 Pfam PF00535 Glycosyl transferase family 2 31 173 5.2E-6 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS24575 073407352fb2240d43f65a3277caac40 325 Gene3D G3DSA:3.90.550.10 5 224 4.7E-17 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24575 073407352fb2240d43f65a3277caac40 325 SUPERFAMILY SSF53448 8 280 6.28E-22 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS09060 9c4b4464e293f331490cf8719086d5b3 174 Gene3D G3DSA:3.90.420.10 9 170 1.2E-24 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS09060 9c4b4464e293f331490cf8719086d5b3 174 SUPERFAMILY SSF56524 21 167 8.24E-20 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS09060 9c4b4464e293f331490cf8719086d5b3 174 Pfam PF00174 Oxidoreductase molybdopterin binding domain 23 165 3.5E-13 T 29-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AM474_RS12945 a67d3362c53e495f68c24f5d1923c82c 179 SUPERFAMILY SSF52317 8 178 2.37E-43 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS12945 a67d3362c53e495f68c24f5d1923c82c 179 Gene3D G3DSA:3.40.50.880 1 179 5.5E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS12945 a67d3362c53e495f68c24f5d1923c82c 179 Pfam PF01965 DJ-1/PfpI family 10 175 2.4E-45 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS12945 a67d3362c53e495f68c24f5d1923c82c 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 177 1.4E-44 T 29-03-2018 IPR006286 Peptidase C56, PfpI AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 Pfam PF01979 Amidohydrolase family 41 361 5.8E-12 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 Gene3D G3DSA:3.20.20.140 60 334 2.8E-89 T 29-03-2018 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 37 360 1.2E-71 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 SUPERFAMILY SSF51338 334 362 5.28E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 SUPERFAMILY SSF51338 3 44 5.28E-8 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 Gene3D G3DSA:2.30.40.10 2 59 4.0E-7 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 SUPERFAMILY SSF51556 45 332 8.32E-83 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS08160 bcd8020251fa6b127637340eaded987b 363 PIRSF PIRSF038994 3 363 6.5E-97 T 29-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 Gene3D G3DSA:3.90.45.10 1 169 3.6E-54 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 111 129 1.5E-31 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 130 159 1.5E-31 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 99 110 1.5E-31 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 PRINTS PR01576 Peptide deformylase signature 35 64 1.5E-31 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 Hamap MF_00163 Peptide deformylase [def]. 1 172 27.944 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 PIRSF PIRSF004749 1 172 8.1E-48 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 SUPERFAMILY SSF56420 1 167 2.62E-57 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 Pfam PF01327 Polypeptide deformylase 3 160 1.1E-47 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS24530 8c96ec9bf6d23dbbcea50b89f368e19b 179 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 6.7E-35 T 29-03-2018 IPR023635 Peptide deformylase AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 211 39.398 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 Gene3D G3DSA:3.40.50.150 1 208 1.1E-36 T 29-03-2018 AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 206 2.4E-65 T 29-03-2018 AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 1.0E-69 T 29-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 AM474_RS07480 18d8cc63395a656143f6768e573cc2ea 211 SUPERFAMILY SSF53335 4 207 3.31E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS00965 bc1d57d689e182b40d6b24fe96e6a9ba 156 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS00965 bc1d57d689e182b40d6b24fe96e6a9ba 156 Gene3D G3DSA:3.90.79.10 1 150 1.4E-29 T 29-03-2018 AM474_RS00965 bc1d57d689e182b40d6b24fe96e6a9ba 156 Pfam PF00293 NUDIX domain 4 119 9.1E-17 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS00965 bc1d57d689e182b40d6b24fe96e6a9ba 156 SUPERFAMILY SSF55811 4 143 3.25E-28 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 SUPERFAMILY SSF53850 90 297 2.17E-47 T 29-03-2018 AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 Pfam PF03466 LysR substrate binding domain 91 296 1.2E-47 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.0E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:1.10.10.10 1 85 5.6E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:3.40.190.10 178 266 2.2E-27 T 29-03-2018 AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 SUPERFAMILY SSF46785 3 113 5.45E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31760 3276a700633affdb8ef037f42fe01c2e 304 Gene3D G3DSA:3.40.190.10 94 177 2.9E-19 T 29-03-2018 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 752 6.6E-188 T 29-03-2018 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF56601 418 606 4.27E-130 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF56601 211 233 4.27E-130 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF56601 658 802 4.27E-130 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF56601 262 313 4.27E-130 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Gene3D G3DSA:3.40.710.10 242 766 6.7E-126 T 29-03-2018 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF17092 Penicillin-binding protein OB-like domain 316 421 3.6E-25 T 29-03-2018 IPR031376 Penicillin-binding protein, OB-like domain AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 SUPERFAMILY SSF53955 43 255 1.01E-77 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00912 Transglycosylase 55 229 3.9E-65 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Gene3D G3DSA:1.10.3810.10 48 241 1.7E-78 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 649 742 3.9E-6 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS17655 62e0f85a27e0a9cc28284b329b315f5f 823 Pfam PF00905 Penicillin binding protein transpeptidase domain 428 608 5.1E-24 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF52540 199 588 4.86E-98 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 SMART SM00382 341 464 1.3E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 SUPERFAMILY SSF160246 16 160 9.15E-12 T 29-03-2018 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 69 167 1.9E-15 T 29-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 Pfam PF00437 Type II/IV secretion system protein 220 480 2.8E-76 T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 408 422 - T 29-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.40.50.300 317 594 4.2E-59 T 29-03-2018 AM474_RS16780 370b962e6003c2de75ba61b0c19a555b 594 Gene3D G3DSA:3.30.450.90 188 313 1.6E-44 T 29-03-2018 AM474_RS26235 e229aec05b14aa8f8360b807c386ce8a 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 6.0E-28 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM474_RS26235 e229aec05b14aa8f8360b807c386ce8a 78 Pfam PF05052 MerE protein 1 75 1.5E-48 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM474_RS01790 e229aec05b14aa8f8360b807c386ce8a 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 6.0E-28 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM474_RS01790 e229aec05b14aa8f8360b807c386ce8a 78 Pfam PF05052 MerE protein 1 75 1.5E-48 T 29-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 AM474_RS27035 beaf3ec6aca5e63fbb25190c4ab3162c 198 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 28 195 3.0E-93 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM474_RS27035 beaf3ec6aca5e63fbb25190c4ab3162c 198 PIRSF PIRSF011444 3 198 9.1E-91 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM474_RS27035 beaf3ec6aca5e63fbb25190c4ab3162c 198 Pfam PF06940 Domain of unknown function (DUF1287) 34 195 1.2E-66 T 29-03-2018 IPR009706 Protein of unknown function DUF1287 AM474_RS27035 beaf3ec6aca5e63fbb25190c4ab3162c 198 Gene3D G3DSA:3.90.1720.10 27 198 1.1E-6 T 29-03-2018 AM474_RS15820 709e779466aaa00a036b7efcbaa7d793 224 SUPERFAMILY SSF56235 1 224 1.7E-79 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS15820 709e779466aaa00a036b7efcbaa7d793 224 Gene3D G3DSA:3.60.20.10 1 216 2.4E-79 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS15820 709e779466aaa00a036b7efcbaa7d793 224 Pfam PF06267 Family of unknown function (DUF1028) 2 191 2.5E-68 T 29-03-2018 IPR010430 Protein of unknown function DUF1028 AM474_RS03695 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 248 5.0E-17 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS03695 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Gene3D G3DSA:3.40.190.10 31 130 2.1E-12 T 29-03-2018 AM474_RS03695 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SUPERFAMILY SSF53850 34 252 1.18E-30 T 29-03-2018 AM474_RS03695 bdeb4fd6f7f738d995ccdcff6853e4c1 282 SMART SM00062 31 262 0.0084 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS03695 bdeb4fd6f7f738d995ccdcff6853e4c1 282 Gene3D G3DSA:3.40.190.10 131 219 0.22 T 29-03-2018 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 SUPERFAMILY SSF88659 99 162 5.98E-10 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 Pfam PF08281 Sigma-70, region 4 109 160 3.0E-7 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 Gene3D G3DSA:1.10.10.10 73 163 1.7E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 SUPERFAMILY SSF88946 5 90 1.37E-12 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 Pfam PF04542 Sigma-70 region 2 8 75 6.2E-10 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 Gene3D G3DSA:1.25.40.10 295 407 2.1E-6 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 163 7.1E-13 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS25830 b93324ae05401ec7e128f6db8ab8c07e 407 Gene3D G3DSA:1.10.1740.10 2 72 3.8E-14 T 29-03-2018 AM474_RS11490 16240742b9fca92f0a211f1af4bc7ec3 68 Pfam PF05489 Phage Tail Protein X 4 61 7.0E-26 T 29-03-2018 IPR008861 Phage Tail Protein X-like AM474_RS26575 8e9bfe47c4cf116f9a9f2ad2707de182 411 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 384 2.7E-116 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM474_RS26575 8e9bfe47c4cf116f9a9f2ad2707de182 411 PIRSF PIRSF019466 2 407 6.1E-136 T 29-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 AM474_RS06630 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Pfam PF03358 NADPH-dependent FMN reductase 1 143 3.7E-31 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS06630 fc8884c9c2517fa6ac7db9bbe4d0a233 197 Gene3D G3DSA:3.40.50.360 1 193 5.4E-30 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS06630 fc8884c9c2517fa6ac7db9bbe4d0a233 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 2.4E-69 T 29-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 AM474_RS06630 fc8884c9c2517fa6ac7db9bbe4d0a233 197 SUPERFAMILY SSF52218 1 168 3.26E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS14290 118b3aff3d316b58c8b8e8b5006847a7 304 SUPERFAMILY SSF110296 74 285 2.35E-5 T 29-03-2018 AM474_RS14290 118b3aff3d316b58c8b8e8b5006847a7 304 Gene3D G3DSA:2.130.10.10 43 301 1.1E-8 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS25170 192376e68dccc12be26752f8d0b0557b 167 SUPERFAMILY SSF52833 10 163 1.27E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS25170 192376e68dccc12be26752f8d0b0557b 167 Pfam PF14595 Thioredoxin 13 135 3.1E-23 T 29-03-2018 AM474_RS25170 192376e68dccc12be26752f8d0b0557b 167 Gene3D G3DSA:3.40.30.10 1 167 3.0E-7 T 29-03-2018 AM474_RS13520 4646ab5f3ac66bc87e5496c344d21e22 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 108 - T 29-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AM474_RS13520 4646ab5f3ac66bc87e5496c344d21e22 158 Pfam PF01047 MarR family 44 100 1.2E-10 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS13520 4646ab5f3ac66bc87e5496c344d21e22 158 Gene3D G3DSA:1.10.10.10 4 156 4.5E-19 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13520 4646ab5f3ac66bc87e5496c344d21e22 158 SUPERFAMILY SSF46785 8 152 3.38E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13520 4646ab5f3ac66bc87e5496c344d21e22 158 SMART SM00347 34 137 2.2E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS25260 0969cf8aa5537af01b6c083e423b8b52 99 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 5 88 8.2E-34 T 29-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype AM474_RS25260 0969cf8aa5537af01b6c083e423b8b52 99 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 4 88 1.9E-34 T 29-03-2018 IPR010152 CRISPR-associated protein Cas2 subtype AM474_RS05485 fd06fce892fbf6923273eaf13876f821 389 Gene3D G3DSA:3.40.1090.10 2 304 5.4E-41 T 29-03-2018 AM474_RS05485 fd06fce892fbf6923273eaf13876f821 389 Pfam PF01734 Patatin-like phospholipase 14 226 1.7E-23 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM474_RS05485 fd06fce892fbf6923273eaf13876f821 389 SUPERFAMILY SSF52151 9 251 2.12E-49 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS04655 55b72af5af4bc59a8be6aab5a3a8eca1 326 Gene3D G3DSA:3.60.21.10 2 324 1.6E-33 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS04655 55b72af5af4bc59a8be6aab5a3a8eca1 326 SUPERFAMILY SSF56300 235 305 8.98E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS04655 55b72af5af4bc59a8be6aab5a3a8eca1 326 SUPERFAMILY SSF56300 5 174 8.98E-34 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS04655 55b72af5af4bc59a8be6aab5a3a8eca1 326 Pfam PF00149 Calcineurin-like phosphoesterase 11 149 6.1E-10 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS24705 66b911a708597833970f1a5c7c08f221 184 SMART SM01040 17 131 9.8E-15 T 29-03-2018 IPR003497 BRO N-terminal domain AM474_RS29295 567f130bb93e140030960c96957df3b4 92 Pfam PF00639 PPIC-type PPIASE domain 12 88 7.8E-19 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM474_RS29295 567f130bb93e140030960c96957df3b4 92 SUPERFAMILY SSF54534 4 88 2.22E-26 T 29-03-2018 AM474_RS29295 567f130bb93e140030960c96957df3b4 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 29-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AM474_RS29295 567f130bb93e140030960c96957df3b4 92 Gene3D G3DSA:3.10.50.40 3 91 1.6E-28 T 29-03-2018 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 Gene3D G3DSA:3.20.20.60 1 514 6.0E-128 T 29-03-2018 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 429 530 2.6E-13 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 81 269 3.2E-20 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 Pfam PF00463 Isocitrate lyase family 330 399 1.3E-9 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 SUPERFAMILY SSF51621 429 514 2.42E-124 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 SUPERFAMILY SSF51621 10 392 2.42E-124 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 1 278 4.9E-29 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 290 410 5.4E-12 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS01015 23c386e72bf88d768b21d31081ac26e1 531 PIRSF PIRSF001362 412 531 4.1E-8 T 29-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AM474_RS17565 b5e83c517d53f17f1fcfc70f9a0440e1 138 Gene3D G3DSA:1.20.120.20 6 136 6.4E-5 T 29-03-2018 AM474_RS17565 b5e83c517d53f17f1fcfc70f9a0440e1 138 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 13 135 1.7E-46 T 29-03-2018 IPR008769 Poly granule associated AM474_RS17565 b5e83c517d53f17f1fcfc70f9a0440e1 138 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 21 136 2.2E-42 T 29-03-2018 IPR008769 Poly granule associated AM474_RS06305 d830e8a2faf8a802079a1679ede9d51b 121 Pfam PF10861 Protein of Unknown function (DUF2784) 4 111 2.1E-40 T 29-03-2018 IPR021218 Protein of unknown function DUF2784 AM474_RS17885 8fe8ef3bae4cf14b0fb6c354831e979e 104 Gene3D G3DSA:1.10.10.10 1 81 3.6E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS17885 8fe8ef3bae4cf14b0fb6c354831e979e 104 SUPERFAMILY SSF46785 11 80 9.88E-6 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04925 77c9b354605cb13977b102fca9763415 494 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 29-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 470 7.8E-142 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 320 2.0E-109 T 29-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 SUPERFAMILY SSF52374 4 308 2.95E-110 T 29-03-2018 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 SUPERFAMILY SSF48163 314 472 7.59E-34 T 29-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Gene3D G3DSA:3.40.50.620 4 129 3.6E-35 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Gene3D G3DSA:1.10.1160.10 246 330 1.4E-34 T 29-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Gene3D G3DSA:1.10.10.350 380 485 3.3E-19 T 29-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 203 1.3E-21 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.3E-21 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.3E-21 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 209 217 1.3E-21 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.3E-21 T 29-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 471 29.995 T 29-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM474_RS04925 77c9b354605cb13977b102fca9763415 494 Gene3D G3DSA:3.40.50.620 130 244 3.0E-24 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 393 438 1.14E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 485 529 1.14E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 195 293 1.14E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 31 226 2.2E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 227 363 0.18 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 SUPERFAMILY SSF48452 469 536 4.55E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 380 459 0.0047 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS24215 19fffb0c27aaf0d672dae716fdb872b9 764 Gene3D G3DSA:1.25.40.10 460 751 1.7E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 Pfam PF00270 DEAD/DEAH box helicase 295 471 4.6E-6 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 Gene3D G3DSA:3.40.50.300 254 490 4.5E-16 T 29-03-2018 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 294 648 5.9E-66 T 29-03-2018 IPR006474 Helicase Cas3, CRISPR-associated, core AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 SUPERFAMILY SSF52540 292 343 6.63E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 SUPERFAMILY SSF52540 381 471 6.63E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 SUPERFAMILY SSF52540 510 643 6.63E-30 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 Gene3D G3DSA:3.40.50.300 523 655 1.1E-12 T 29-03-2018 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 SMART SM00490 553 642 0.0057 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 26 213 4.9E-26 T 29-03-2018 IPR006483 CRISPR-associated Cas3-HD domain AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 SUPERFAMILY SSF109604 10 160 3.87E-5 T 29-03-2018 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 Gene3D G3DSA:1.10.3210.10 11 253 9.0E-6 T 29-03-2018 AM474_RS25225 6ef62fd45dc0dec95c71f1438a6a1c11 890 Pfam PF00271 Helicase conserved C-terminal domain 534 641 4.5E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS04995 df8f564b240121eacb23e90a8e96b416 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 332 1.5E-24 T 29-03-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 AM474_RS04995 df8f564b240121eacb23e90a8e96b416 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 3.6E-104 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AM474_RS04995 df8f564b240121eacb23e90a8e96b416 344 Gene3D G3DSA:3.40.50.720 3 331 4.5E-62 T 29-03-2018 AM474_RS04995 df8f564b240121eacb23e90a8e96b416 344 SUPERFAMILY SSF51735 1 261 6.87E-55 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23845 443683346192e45af8ec852d7e02247c 530 SUPERFAMILY SSF56322 36 513 5.49E-139 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 Pfam PF00425 chorismate binding enzyme 246 505 4.0E-82 T 29-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AM474_RS23845 443683346192e45af8ec852d7e02247c 530 PIRSF PIRSF001373 6 524 1.2E-217 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 Pfam PF04715 Anthranilate synthase component I, N terminal region 40 194 2.7E-6 T 29-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 37 516 3.3E-174 T 29-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 Gene3D G3DSA:3.60.120.10 16 523 6.4E-140 T 29-03-2018 IPR005801 ADC synthase GO:0009058 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 PRINTS PR00095 Anthranilate synthase component I signature 353 366 8.9E-20 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 PRINTS PR00095 Anthranilate synthase component I signature 367 380 8.9E-20 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 PRINTS PR00095 Anthranilate synthase component I signature 447 461 8.9E-20 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23845 443683346192e45af8ec852d7e02247c 530 PRINTS PR00095 Anthranilate synthase component I signature 462 476 8.9E-20 T 29-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS22085 92e924427b90172294686729e074174d 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.5E-8 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22085 92e924427b90172294686729e074174d 149 Gene3D G3DSA:3.30.700.10 9 49 1.6E-5 T 29-03-2018 AM474_RS22085 92e924427b90172294686729e074174d 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 6.7E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22085 92e924427b90172294686729e074174d 149 Gene3D G3DSA:3.55.40.10 50 149 1.7E-13 T 29-03-2018 AM474_RS22085 92e924427b90172294686729e074174d 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22085 92e924427b90172294686729e074174d 149 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 148 7.6E-57 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS22085 92e924427b90172294686729e074174d 149 SUPERFAMILY SSF54523 9 81 9.42E-11 T 29-03-2018 AM474_RS22085 92e924427b90172294686729e074174d 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 4.7E-6 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS22085 92e924427b90172294686729e074174d 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 4.7E-6 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS22085 92e924427b90172294686729e074174d 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 124 139 4.7E-6 T 29-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 AM474_RS22085 92e924427b90172294686729e074174d 149 Pfam PF12019 Type II transport protein GspH 44 138 9.1E-5 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AM474_RS14755 7dea285e5ff31f7d9251c026d179f731 362 Gene3D G3DSA:3.40.50.450 117 268 3.9E-39 T 29-03-2018 AM474_RS14755 7dea285e5ff31f7d9251c026d179f731 362 Gene3D G3DSA:1.10.10.10 289 359 8.3E-8 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14755 7dea285e5ff31f7d9251c026d179f731 362 SUPERFAMILY SSF102405 85 293 3.97E-45 T 29-03-2018 AM474_RS14755 7dea285e5ff31f7d9251c026d179f731 362 Pfam PF02481 DNA recombination-mediator protein A 82 283 4.5E-75 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM474_RS14755 7dea285e5ff31f7d9251c026d179f731 362 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 291 8.2E-75 T 29-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM474_RS23710 739f37d9d12cf4f1a4ac50554267dd66 508 Pfam PF07916 TraG-like protein, N-terminal region 10 487 3.3E-87 T 29-03-2018 IPR012931 TraG-like, N-terminal AM474_RS03320 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.90.1150.10 280 403 8.3E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS03320 02a76c47c9db83d9d3ad2d14c3463b27 403 Pfam PF00155 Aminotransferase class I and II 35 385 5.2E-48 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS03320 02a76c47c9db83d9d3ad2d14c3463b27 403 SUPERFAMILY SSF53383 6 401 3.36E-95 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS03320 02a76c47c9db83d9d3ad2d14c3463b27 403 Gene3D G3DSA:3.40.640.10 52 279 4.0E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS31770 5d6b44577da604801ba2655e3864c943 181 Gene3D G3DSA:3.40.1000.10 26 181 1.1E-7 T 29-03-2018 AM474_RS31770 5d6b44577da604801ba2655e3864c943 181 Pfam PF16304 Domain of unknown function (DUF4946) 32 180 1.8E-69 T 29-03-2018 IPR032543 Protein of unknown function DUF4946 AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:3.30.450.40 81 256 1.2E-21 T 29-03-2018 IPR029016 GAF domain-like AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 Gene3D G3DSA:1.10.10.10 1 70 3.4E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 Pfam PF09339 IclR helix-turn-helix domain 12 60 9.1E-15 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 SMART SM00346 10 99 2.5E-9 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF55781 85 255 1.41E-19 T 29-03-2018 IPR029016 GAF domain-like AM474_RS21700 927a9e882bd95010e9b60d22837a786a 256 SUPERFAMILY SSF46785 10 70 3.61E-11 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 Gene3D G3DSA:3.40.50.720 169 337 1.3E-31 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 Gene3D G3DSA:3.50.50.60 1 168 1.9E-31 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 SUPERFAMILY SSF51905 1 375 4.97E-65 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 3.2E-39 T 29-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 465 7.1E-159 T 29-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PIRSF PIRSF000350 1 463 3.5E-92 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 329 1.2E-69 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 SUPERFAMILY SSF55424 344 465 9.11E-41 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-35 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.6E-35 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.6E-35 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 2.6E-35 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-35 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 29-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 5.4E-78 T 29-03-2018 AM474_RS19070 df2b08d3b3cdc507089ff70b20559669 467 Gene3D G3DSA:3.30.390.30 338 465 1.3E-42 T 29-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AM474_RS29075 6106a1b97349b1bc202ee39f43c2176e 226 Pfam PF03412 Peptidase C39 family 47 178 6.3E-21 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM474_RS29075 6106a1b97349b1bc202ee39f43c2176e 226 Gene3D G3DSA:3.90.70.10 46 184 4.0E-33 T 29-03-2018 AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 SUPERFAMILY SSF46689 7 68 2.19E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 Pfam PF13972 Bacterial transcriptional repressor 60 203 8.6E-47 T 29-03-2018 IPR025722 Bacterial transcriptional repressor TetR AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 3.2E-11 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 Gene3D G3DSA:1.10.357.10 4 213 1.6E-34 T 29-03-2018 AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS12880 0b4116d44b63f49765093dd28020d5a2 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS02150 957b9469f2d2bac02e5fcd58d96fb23a 114 Pfam PF13560 Helix-turn-helix domain 2 73 9.1E-8 T 29-03-2018 AM474_RS02150 957b9469f2d2bac02e5fcd58d96fb23a 114 SMART SM00530 5 64 9.3E-8 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS02150 957b9469f2d2bac02e5fcd58d96fb23a 114 SUPERFAMILY SSF47413 1 70 6.19E-11 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS02150 957b9469f2d2bac02e5fcd58d96fb23a 114 Gene3D G3DSA:1.10.260.40 1 98 2.1E-17 T 29-03-2018 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 55.524 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 SUPERFAMILY SSF51713 1 362 3.01E-160 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 Gene3D G3DSA:3.20.20.105 1 364 9.9E-157 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 7.9E-167 T 29-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 1.0E-158 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS08815 cccac62952d94325b4a9248d3bd41fd1 372 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 5.7E-90 T 29-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM474_RS17325 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.20.58.320 1 89 5.0E-22 T 29-03-2018 AM474_RS17325 8c4af83850f5f41cdeaa0db6f76c98aa 200 Gene3D G3DSA:1.25.40.10 90 200 1.1E-33 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS17325 8c4af83850f5f41cdeaa0db6f76c98aa 200 SUPERFAMILY SSF48452 3 196 9.48E-56 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS17325 8c4af83850f5f41cdeaa0db6f76c98aa 200 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 197 1.8E-57 T 29-03-2018 IPR010323 Protein of unknown function DUF924 AM474_RS31685 5ac997b94bf304a91ed1e8d7b788674a 226 Pfam PF00857 Isochorismatase family 20 172 6.6E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS31685 5ac997b94bf304a91ed1e8d7b788674a 226 Gene3D G3DSA:3.40.50.850 7 215 3.9E-37 T 29-03-2018 AM474_RS31685 5ac997b94bf304a91ed1e8d7b788674a 226 SUPERFAMILY SSF52499 12 209 5.36E-47 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS07990 e3c87e4caf4650e0f896bcfdae336295 179 PIRSF PIRSF011484 1 178 9.2E-52 T 29-03-2018 IPR009822 YaeQ AM474_RS07990 e3c87e4caf4650e0f896bcfdae336295 179 SMART SM01322 1 174 2.8E-93 T 29-03-2018 IPR009822 YaeQ AM474_RS07990 e3c87e4caf4650e0f896bcfdae336295 179 SUPERFAMILY SSF52980 2 177 4.29E-62 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS07990 e3c87e4caf4650e0f896bcfdae336295 179 Pfam PF07152 YaeQ protein 1 171 5.9E-62 T 29-03-2018 IPR009822 YaeQ AM474_RS07990 e3c87e4caf4650e0f896bcfdae336295 179 Gene3D G3DSA:3.10.640.10 1 172 9.7E-65 T 29-03-2018 AM474_RS01605 7440dff33f76380cd36e98359334cc38 118 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.0E-22 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01605 7440dff33f76380cd36e98359334cc38 118 Gene3D G3DSA:1.10.1660.10 14 118 4.9E-28 T 29-03-2018 AM474_RS01605 7440dff33f76380cd36e98359334cc38 118 SMART SM00422 19 89 5.3E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS01605 7440dff33f76380cd36e98359334cc38 118 SUPERFAMILY SSF46955 17 113 1.6E-20 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS26855 16cd1fe619aa81c7368eb611d0d91985 155 Gene3D G3DSA:1.20.58.60 22 85 0.055 T 29-03-2018 AM474_RS26855 16cd1fe619aa81c7368eb611d0d91985 155 Gene3D G3DSA:1.10.287.1060 86 142 0.001 T 29-03-2018 AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 363 53.806 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 Gene3D G3DSA:3.40.250.10 4 142 2.5E-14 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 Gene3D G3DSA:3.40.50.300 143 347 1.1E-4 T 29-03-2018 AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 SMART SM00450 2 133 7.9E-7 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 SUPERFAMILY SSF52821 92 156 2.7E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 SUPERFAMILY SSF52821 10 64 2.7E-18 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 348 5.8E-106 T 29-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AM474_RS27390 b62df20cdb1e58e3d73818105713d546 369 SUPERFAMILY SSF52540 145 283 9.16E-6 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02395 8263421e3c4b49ae62ff22c408d31026 359 PIRSF PIRSF034565 5 357 4.3E-55 T 29-03-2018 IPR017029 Putative phage head morphogenesis protein AM474_RS09895 fdeea7d54955d5362d7e550a9b615e08 118 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.3E-27 T 29-03-2018 AM474_RS09895 fdeea7d54955d5362d7e550a9b615e08 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 6.6E-39 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM474_RS09895 fdeea7d54955d5362d7e550a9b615e08 118 SUPERFAMILY SSF81301 1 111 8.66E-41 T 29-03-2018 AM474_RS09895 fdeea7d54955d5362d7e550a9b615e08 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 26.368 T 29-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM474_RS09895 fdeea7d54955d5362d7e550a9b615e08 118 Gene3D G3DSA:3.30.460.10 1 118 2.0E-39 T 29-03-2018 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:1.10.287.130 269 326 1.8E-21 T 29-03-2018 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF47384 252 330 4.32E-22 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:3.30.450.20 65 268 2.4E-5 T 29-03-2018 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00388 265 330 1.3E-23 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00387 378 494 7.5E-40 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 35 111 1.8E-9 T 29-03-2018 IPR019247 Histidine kinase BarA, N-terminal AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 330 1.5E-19 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF52172 516 633 2.28E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF55874 319 494 6.42E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00448 515 628 3.5E-37 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 1.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 1.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 1.7E-17 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 492 6.4E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Pfam PF00072 Response regulator receiver domain 517 628 1.6E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SUPERFAMILY SSF158472 192 239 3.14E-6 T 29-03-2018 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:3.40.50.2300 503 647 1.5E-43 T 29-03-2018 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 SMART SM00304 191 243 1.2E-7 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS27230 7f66c6fd632d6edb5ce8a52f85a8e857 651 Gene3D G3DSA:3.30.565.10 334 502 3.4E-47 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS08520 f543d77fbd2b56b712a3fc678a5814a0 127 Gene3D G3DSA:1.10.10.10 46 107 2.7E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS08520 f543d77fbd2b56b712a3fc678a5814a0 127 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 46 96 7.5E-18 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM474_RS13345 c96f930fd7129c977e11b68f9b359d09 289 SUPERFAMILY SSF161098 23 274 2.09E-53 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13345 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 279 4.7E-122 T 29-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 AM474_RS13345 c96f930fd7129c977e11b68f9b359d09 289 Gene3D G3DSA:1.10.3720.10 22 285 2.4E-40 T 29-03-2018 AM474_RS13345 c96f930fd7129c977e11b68f9b359d09 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 280 1.8E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13345 c96f930fd7129c977e11b68f9b359d09 289 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 276 4.5E-97 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM474_RS07445 b415b4dfcc7825cd33bbc55768c4a31d 168 SUPERFAMILY SSF142433 4 161 7.06E-52 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS07445 b415b4dfcc7825cd33bbc55768c4a31d 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 161 3.5E-43 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS07445 b415b4dfcc7825cd33bbc55768c4a31d 168 Gene3D G3DSA:3.90.950.20 1 167 2.6E-55 T 29-03-2018 AM474_RS07445 b415b4dfcc7825cd33bbc55768c4a31d 168 Pfam PF02464 Competence-damaged protein 10 161 7.1E-55 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS23660 c17c318745410ed79ae9acec2672bc28 267 Gene3D G3DSA:3.40.225.10 29 263 4.0E-62 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS23660 c17c318745410ed79ae9acec2672bc28 267 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 35 220 8.0E-38 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS23660 c17c318745410ed79ae9acec2672bc28 267 SUPERFAMILY SSF53639 30 247 7.06E-43 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS23660 c17c318745410ed79ae9acec2672bc28 267 SMART SM01007 34 220 3.9E-35 T 29-03-2018 IPR001303 Class II aldolase/adducin N-terminal AM474_RS23475 c8eca476f14dfcc3cf82d44efa236157 411 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 9 292 23.507 T 29-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial AM474_RS23475 c8eca476f14dfcc3cf82d44efa236157 411 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 267 5.4E-74 T 29-03-2018 IPR017039 Virulence factor BrkB AM474_RS23475 c8eca476f14dfcc3cf82d44efa236157 411 Pfam PF03631 Virulence factor BrkB 22 266 2.8E-58 T 29-03-2018 IPR017039 Virulence factor BrkB AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 Gene3D G3DSA:3.40.190.10 199 294 6.5E-28 T 29-03-2018 AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 PIRSF PIRSF002741 16 530 6.6E-104 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 Gene3D G3DSA:3.90.76.10 33 198 9.9E-35 T 29-03-2018 AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 448 2.2E-96 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 Gene3D G3DSA:3.10.105.10 295 502 2.8E-61 T 29-03-2018 AM474_RS20870 6a8d74c8dc2de415313830b2d4063c90 531 SUPERFAMILY SSF53850 25 528 2.64E-146 T 29-03-2018 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 9.2E-5 T 29-03-2018 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 9.2E-5 T 29-03-2018 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 209 227 9.2E-5 T 29-03-2018 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 Gene3D G3DSA:3.50.50.60 6 223 1.1E-14 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 SUPERFAMILY SSF51905 207 245 4.14E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 SUPERFAMILY SSF51905 286 390 4.14E-5 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 Gene3D G3DSA:3.50.50.60 224 398 7.0E-7 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 357 3.7E-121 T 29-03-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase AM474_RS31525 1fc07325da147319ea28a6ccd7409fe2 443 SUPERFAMILY SSF51905 11 266 3.66E-16 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 PIRSF PIRSF000521 172 425 7.5E-41 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 PIRSF PIRSF000521 25 129 0.0049 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 PIRSF PIRSF000521 124 157 0.64 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 Gene3D G3DSA:3.90.1150.10 307 426 1.6E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 Gene3D G3DSA:3.40.640.10 173 306 3.3E-48 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 421 2.8E-163 T 29-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 SUPERFAMILY SSF53383 22 425 2.86E-141 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 Pfam PF00202 Aminotransferase class-III 18 421 2.8E-137 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS13425 4871075788c6e05ddf6977c3d26a1bf1 426 Gene3D G3DSA:3.90.1150.10 1 154 3.1E-45 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS03850 41f1cf5f21fead3b4efa908026f7280b 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 1.6E-93 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS03850 41f1cf5f21fead3b4efa908026f7280b 369 SUPERFAMILY SSF51395 3 365 1.19E-129 T 29-03-2018 AM474_RS03850 41f1cf5f21fead3b4efa908026f7280b 369 Gene3D G3DSA:3.20.20.70 4 369 5.4E-132 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS25045 c69ad7dbc5d9d86953eebddd8a3092ab 319 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 66 281 2.5E-16 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS25045 c69ad7dbc5d9d86953eebddd8a3092ab 319 Gene3D G3DSA:3.60.130.10 19 290 7.5E-29 T 29-03-2018 AM474_RS25045 c69ad7dbc5d9d86953eebddd8a3092ab 319 SUPERFAMILY SSF51197 23 289 3.62E-38 T 29-03-2018 AM474_RS00555 e95ead7aaa0ba91c6ff2c46952b30011 244 Pfam PF12697 Alpha/beta hydrolase family 4 238 2.3E-14 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS00555 e95ead7aaa0ba91c6ff2c46952b30011 244 SUPERFAMILY SSF53474 4 241 1.72E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS00555 e95ead7aaa0ba91c6ff2c46952b30011 244 Gene3D G3DSA:3.40.50.1820 4 244 3.3E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.3E-46 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.7E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.7E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.7E-18 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 Gene3D G3DSA:3.30.70.600 3 102 5.9E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.007 T 29-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 SMART SM01403 7 101 9.7E-56 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 29-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11175 84d268ba9f127038231991402a4d5e4b 103 SUPERFAMILY SSF54999 6 101 1.12E-36 T 29-03-2018 IPR027486 Ribosomal protein S10 domain AM474_RS15835 186da5be8e9f7e1958278f52dec4d0aa 312 SUPERFAMILY SSF53850 23 299 8.96E-77 T 29-03-2018 AM474_RS15835 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.10 147 312 5.0E-34 T 29-03-2018 AM474_RS15835 186da5be8e9f7e1958278f52dec4d0aa 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 310 5.3E-133 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AM474_RS15835 186da5be8e9f7e1958278f52dec4d0aa 312 Gene3D G3DSA:3.40.190.10 22 146 1.2E-16 T 29-03-2018 AM474_RS15835 186da5be8e9f7e1958278f52dec4d0aa 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 283 3.1E-54 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS26505 7ed8cebcfcf7e41723596c86378b2c76 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 1.5E-17 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM474_RS26505 7ed8cebcfcf7e41723596c86378b2c76 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 8.7E-22 T 29-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 Pfam PF07690 Major Facilitator Superfamily 23 374 1.1E-19 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 SUPERFAMILY SSF103473 16 424 7.19E-60 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 Gene3D G3DSA:1.20.1250.20 225 423 6.1E-18 T 29-03-2018 AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 29-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AM474_RS22210 20f1d5992df7e84186b49e91cdab23f8 438 Gene3D G3DSA:1.20.1250.20 11 224 2.9E-24 T 29-03-2018 AM474_RS22470 35151979f806c6d400135eb20db8afe9 151 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 141 3.8E-32 T 29-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC AM474_RS22470 35151979f806c6d400135eb20db8afe9 151 PIRSF PIRSF004923 1 150 8.7E-43 T 29-03-2018 IPR026268 Protein RseC AM474_RS21805 f869479846e439e3f2bdc5691c73478b 523 Pfam PF13559 Domain of unknown function (DUF4129) 442 514 2.4E-5 T 29-03-2018 IPR025403 Domain of unknown function DUF4129 AM474_RS25855 732ea88d13960ffdf3d7ddcdde9b396e 368 SUPERFAMILY SSF110296 2 353 1.7E-58 T 29-03-2018 AM474_RS25855 732ea88d13960ffdf3d7ddcdde9b396e 368 Gene3D G3DSA:2.130.10.10 2 368 1.3E-61 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS06730 4532ea4dfb8d133d64bed24ab113429a 571 Pfam PF05977 Transmembrane secretion effector 26 543 1.0E-219 T 29-03-2018 IPR010290 Transmembrane secretion effector AM474_RS06730 4532ea4dfb8d133d64bed24ab113429a 571 SUPERFAMILY SSF103473 36 418 5.89E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS06730 4532ea4dfb8d133d64bed24ab113429a 571 Gene3D G3DSA:1.20.1250.20 236 421 9.9E-15 T 29-03-2018 AM474_RS06730 4532ea4dfb8d133d64bed24ab113429a 571 Gene3D G3DSA:1.20.1250.20 23 223 1.5E-20 T 29-03-2018 AM474_RS12385 3bf12ccc14a6558634a4ee461a4fd35c 295 SMART SM00563 85 227 3.9E-19 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS12385 3bf12ccc14a6558634a4ee461a4fd35c 295 SUPERFAMILY SSF69593 8 293 6.67E-58 T 29-03-2018 AM474_RS12385 3bf12ccc14a6558634a4ee461a4fd35c 295 Gene3D G3DSA:3.40.1130.10 46 291 2.1E-21 T 29-03-2018 AM474_RS12385 3bf12ccc14a6558634a4ee461a4fd35c 295 Pfam PF01553 Acyltransferase 73 226 6.0E-15 T 29-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 5.2E-91 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 SUPERFAMILY SSF64005 10 233 3.27E-84 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 39.247 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 Gene3D G3DSA:3.40.1180.10 1 241 2.8E-90 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 29-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 AM474_RS07620 3827875acc8a8fbc0fb22b82134a5ee7 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 2.9E-78 T 29-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM474_RS11455 df948fe8c2380d7e6b201e4b16bcaf51 115 Pfam PF16459 Phage tail assembly chaperone, TAC 4 107 2.2E-22 T 29-03-2018 IPR024410 Phage tail assembly chaperone protein, TAC AM474_RS30920 3500fac8752ad90d456a3115c960787f 316 SUPERFAMILY SSF53613 2 309 1.34E-79 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS30920 3500fac8752ad90d456a3115c960787f 316 Gene3D G3DSA:3.40.1190.20 4 316 5.3E-66 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS30920 3500fac8752ad90d456a3115c960787f 316 Pfam PF00294 pfkB family carbohydrate kinase 5 303 6.5E-59 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM474_RS30920 3500fac8752ad90d456a3115c960787f 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM474_RS03075 17f57abc52bbe59fe8b20fd52d33d40c 476 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 2 466 2.4E-190 T 29-03-2018 IPR021207 Integrating conjugative element protein, PFL4705 AM474_RS03075 17f57abc52bbe59fe8b20fd52d33d40c 476 Gene3D G3DSA:1.20.1170.10 43 401 1.3E-8 T 29-03-2018 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF56176 367 445 7.09E-15 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.10.580.10 212 360 1.3E-32 T 29-03-2018 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 SMART SM01091 368 446 2.7E-16 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Gene3D G3DSA:3.30.465.10 361 446 6.5E-17 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 SUPERFAMILY SSF54631 224 363 2.4E-27 T 29-03-2018 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 304 353 7.8E-6 T 29-03-2018 IPR000644 CBS domain AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF00571 CBS domain 237 288 9.1E-8 T 29-03-2018 IPR000644 CBS domain AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 239 288 1.6E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 SMART SM00116 305 353 0.1 T 29-03-2018 IPR000644 CBS domain AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF01595 Domain of unknown function DUF21 21 209 6.0E-51 T 29-03-2018 IPR002550 Domain of unknown function DUF21 AM474_RS15995 22d459e575a24d58ebda4e106409c6a8 446 Pfam PF03471 Transporter associated domain 372 444 8.9E-17 T 29-03-2018 IPR005170 Transporter-associated domain AM474_RS02750 488ae7ada4275fe691eca6a98c9ce5c6 106 Pfam PF11747 Killing trait 11 77 3.1E-27 T 29-03-2018 IPR021070 Killing trait, RebB AM474_RS16790 3bbe32fe7915080dc5f9248e72216b9a 225 Pfam PF01865 Protein of unknown function DUF47 7 224 3.7E-60 T 29-03-2018 IPR018445 Putative phosphate transport regulator AM474_RS16790 3bbe32fe7915080dc5f9248e72216b9a 225 SUPERFAMILY SSF109755 37 209 1.92E-10 T 29-03-2018 AM474_RS16790 3bbe32fe7915080dc5f9248e72216b9a 225 Gene3D G3DSA:1.20.58.220 117 225 2.4E-8 T 29-03-2018 AM474_RS16790 3bbe32fe7915080dc5f9248e72216b9a 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 8 224 2.9E-55 T 29-03-2018 IPR002727 Protein of unknown function DUF47 AM474_RS06380 ef1cce59dd5372ed5f2e2051e6ce8712 390 Pfam PF12698 ABC-2 family transporter protein 38 376 3.5E-21 T 29-03-2018 AM474_RS06380 ef1cce59dd5372ed5f2e2051e6ce8712 390 Gene3D G3DSA:3.40.1710.10 53 205 1.9E-22 T 29-03-2018 AM474_RS04135 11614cbed6e038fab95e533dcffe3d68 433 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 23 433 6.9E-156 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM474_RS04135 11614cbed6e038fab95e533dcffe3d68 433 Pfam PF02687 FtsX-like permease family 319 426 6.7E-15 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM474_RS04135 11614cbed6e038fab95e533dcffe3d68 433 Pfam PF12704 MacB-like periplasmic core domain 46 260 6.9E-18 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM474_RS24965 f56ce9d01fc3a61592c4742f1b821c5d 256 Pfam PF02146 Sir2 family 25 202 4.9E-37 T 29-03-2018 IPR003000 Sirtuin family GO:0070403 AM474_RS24965 f56ce9d01fc3a61592c4742f1b821c5d 256 SUPERFAMILY SSF52467 6 254 2.1E-69 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS24965 f56ce9d01fc3a61592c4742f1b821c5d 256 Gene3D G3DSA:3.40.50.1220 1 255 7.2E-50 T 29-03-2018 IPR029035 DHS-like NAD/FAD-binding domain AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 SUPERFAMILY SSF55103 190 459 9.32E-46 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 Gene3D G3DSA:3.30.43.10 3 91 1.4E-15 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 SUPERFAMILY SSF56176 5 213 1.55E-55 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 Gene3D G3DSA:3.30.465.10 92 237 5.5E-35 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 Gene3D G3DSA:1.10.45.10 419 458 1.4E-11 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 458 2.8E-55 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM474_RS26140 8fdcc2fa3f73b415d6f25193d158a86e 460 Pfam PF01565 FAD binding domain 42 175 3.1E-33 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS01745 92856dcebdc039a676d0c326742e8a70 361 Gene3D G3DSA:1.10.10.60 288 336 1.2E-5 T 29-03-2018 AM474_RS01745 92856dcebdc039a676d0c326742e8a70 361 Gene3D G3DSA:3.30.450.80 51 133 0.038 T 29-03-2018 AM474_RS01745 92856dcebdc039a676d0c326742e8a70 361 Pfam PF05651 Putative sugar diacid recognition 4 135 4.9E-44 T 29-03-2018 IPR008599 Putative sugar diacid recognition AM474_RS01745 92856dcebdc039a676d0c326742e8a70 361 Pfam PF13556 PucR C-terminal helix-turn-helix domain 300 357 1.5E-19 T 29-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 SUPERFAMILY SSF56235 44 790 4.37E-194 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Gene3D G3DSA:1.10.1400.10 568 672 3.6E-20 T 29-03-2018 AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Gene3D G3DSA:3.60.20.10 254 345 3.4E-26 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 PIRSF PIRSF001227 16 794 7.4E-170 T 29-03-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Gene3D G3DSA:1.10.439.10 38 202 4.6E-48 T 29-03-2018 IPR023343 Penicillin amidase type, domain1 GO:0016811 AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Gene3D G3DSA:3.60.20.10 347 567 1.0E-54 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Gene3D G3DSA:3.60.20.10 673 791 0.0015 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS28765 e58e8ff0dea267903e0a31a732c3c801 809 Pfam PF01804 Penicillin amidase 50 783 2.2E-197 T 29-03-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AM474_RS26905 d4b8a3af608a783d401b19832b7d3c21 203 Gene3D G3DSA:1.10.760.10 36 203 5.9E-27 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26905 d4b8a3af608a783d401b19832b7d3c21 203 SUPERFAMILY SSF46626 16 196 2.89E-30 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26905 d4b8a3af608a783d401b19832b7d3c21 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 4 180 2.4E-83 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS26905 d4b8a3af608a783d401b19832b7d3c21 203 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 179 4.6E-86 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Pfam PF03466 LysR substrate binding domain 92 279 2.4E-15 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Gene3D G3DSA:3.40.190.10 95 185 1.3E-34 T 29-03-2018 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Gene3D G3DSA:3.40.190.10 186 263 7.1E-7 T 29-03-2018 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 297 57.062 T 29-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 SUPERFAMILY SSF46785 3 112 3.4E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.9E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 292 4.0E-113 T 29-03-2018 IPR017685 HTH-type transcriptional regulator ArgP AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 SUPERFAMILY SSF53850 86 291 2.71E-22 T 29-03-2018 AM474_RS21585 979ff5cd587d6b0daee455880f71273a 300 Gene3D G3DSA:1.10.10.10 3 88 1.1E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30660 86b2f6fc3848b68ae313304da6d3b5e1 438 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 22 297 1.1E-70 T 29-03-2018 IPR031009 Three-Cys-motif partner protein AM474_RS19265 fee9dc562455f87303bcb307cf73e509 311 SUPERFAMILY SSF51695 29 297 1.52E-45 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS19265 fee9dc562455f87303bcb307cf73e509 311 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 152 5.2E-17 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM474_RS19265 fee9dc562455f87303bcb307cf73e509 311 Gene3D G3DSA:3.20.20.190 20 308 3.7E-45 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 SMART SM01230 75 331 6.8E-102 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 Pfam PF00120 Glutamine synthetase, catalytic domain 77 407 4.3E-104 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 Gene3D G3DSA:3.30.590.10 74 412 5.8E-92 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 SUPERFAMILY SSF54368 28 73 7.98E-5 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 SUPERFAMILY SSF55931 76 408 1.37E-100 T 29-03-2018 AM474_RS06120 bef5971f8b157df0eb8a5e101aa048b2 413 Gene3D G3DSA:3.10.20.70 10 73 1.8E-5 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS15020 2d8d6ecd15ea0f3c2bd6a38d5511a899 674 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 112 592 5.4E-88 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM474_RS15020 2d8d6ecd15ea0f3c2bd6a38d5511a899 674 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 16 668 5.7E-228 T 29-03-2018 IPR011853 TRAP transporter, 4TM/12TM fusion protein AM474_RS06195 613b5f7bc797d68ff95cba18be806753 396 Gene3D G3DSA:3.40.109.10 125 374 2.5E-33 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS06195 613b5f7bc797d68ff95cba18be806753 396 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 206 373 1.0E-31 T 29-03-2018 IPR020051 SagB-type dehydrogenase domain AM474_RS06195 613b5f7bc797d68ff95cba18be806753 396 SUPERFAMILY SSF55469 185 384 2.83E-22 T 29-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AM474_RS06195 613b5f7bc797d68ff95cba18be806753 396 Pfam PF00881 Nitroreductase family 189 373 2.2E-13 T 29-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AM474_RS29530 95e2775e94ce67857c3f6648531b5af1 300 Gene3D G3DSA:3.30.2350.10 86 300 3.0E-42 T 29-03-2018 AM474_RS29530 95e2775e94ce67857c3f6648531b5af1 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 29-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS29530 95e2775e94ce67857c3f6648531b5af1 300 SUPERFAMILY SSF55120 81 298 5.55E-50 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS29530 95e2775e94ce67857c3f6648531b5af1 300 Pfam PF00849 RNA pseudouridylate synthase 95 242 5.9E-22 T 29-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Gene3D G3DSA:1.20.140.10 270 470 3.2E-40 T 29-03-2018 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 2.0E-21 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Gene3D G3DSA:2.40.110.10 157 269 3.3E-24 T 29-03-2018 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Gene3D G3DSA:1.10.540.10 33 156 4.3E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 158 2.2E-10 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 5.2E-12 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 SUPERFAMILY SSF56645 38 281 4.06E-55 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 585 5.2E-35 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.1E-16 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS12150 aedddc2b4d05c1934d266dd579fcbbf4 592 SUPERFAMILY SSF47203 289 473 1.77E-46 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS09075 d8bfec742b88dc99323941db02980b16 227 SUPERFAMILY SSF103501 4 224 6.28E-64 T 29-03-2018 IPR023234 NarG-like domain AM474_RS09075 d8bfec742b88dc99323941db02980b16 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 224 2.9E-80 T 29-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 AM474_RS09075 d8bfec742b88dc99323941db02980b16 227 Gene3D G3DSA:1.20.950.20 1 216 4.7E-39 T 29-03-2018 AM474_RS09075 d8bfec742b88dc99323941db02980b16 227 Pfam PF02665 Nitrate reductase gamma subunit 5 224 7.8E-77 T 29-03-2018 IPR023234 NarG-like domain AM474_RS25030 8d2eebd93e12cbdb8cb807ce009b242a 232 Gene3D G3DSA:2.60.120.10 131 232 1.5E-22 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25030 8d2eebd93e12cbdb8cb807ce009b242a 232 Pfam PF02678 Pirin 12 118 2.4E-37 T 29-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AM474_RS25030 8d2eebd93e12cbdb8cb807ce009b242a 232 SUPERFAMILY SSF51182 1 231 1.1E-74 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25030 8d2eebd93e12cbdb8cb807ce009b242a 232 Gene3D G3DSA:2.60.120.10 11 130 9.6E-48 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25030 8d2eebd93e12cbdb8cb807ce009b242a 232 PIRSF PIRSF006232 1 231 3.1E-56 T 29-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 2.3E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 SUPERFAMILY SSF46689 7 82 2.0E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 Gene3D G3DSA:1.10.260.40 41 68 7.2E-11 T 29-03-2018 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 Gene3D G3DSA:1.10.357.10 69 204 4.9E-15 T 29-03-2018 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 Gene3D G3DSA:1.10.10.60 1 40 1.7E-13 T 29-03-2018 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 7.3E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS07965 1245e0fc399abdc49505c19bcf5c25fb 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 7.3E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 Pfam PF01817 Chorismate mutase type II 14 90 3.5E-14 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 PIRSF PIRSF029775 1 101 1.0E-40 T 29-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 SUPERFAMILY SSF48600 1 94 5.36E-25 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 SMART SM00830 14 93 4.0E-23 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 Gene3D G3DSA:1.20.59.10 1 98 1.3E-22 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS11005 7bad598d98e2fb987bbd59da9d08a04a 101 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 10 90 1.6E-39 T 29-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS03950 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.5E-37 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS03950 3536b627110c00a26d72cebc04b77b8f 398 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.776 T 29-03-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS03950 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 2.4E-29 T 29-03-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS03950 3536b627110c00a26d72cebc04b77b8f 398 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.9E-107 T 29-03-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:3.40.190.10 94 191 6.6E-13 T 29-03-2018 AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:1.10.10.10 7 92 3.2E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 Pfam PF03466 LysR substrate binding domain 98 301 5.4E-26 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 SUPERFAMILY SSF53850 94 300 1.54E-31 T 29-03-2018 AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 68 9.0E-12 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 Gene3D G3DSA:3.40.190.10 192 276 5.2E-9 T 29-03-2018 AM474_RS13390 78372449a41c39864b9cbfff70ce1875 310 SUPERFAMILY SSF46785 8 87 4.15E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29010 b5f0a56fe66881f5d0b8d4bc9bcf20b0 379 SUPERFAMILY SSF56634 25 378 3.66E-85 T 29-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS29010 b5f0a56fe66881f5d0b8d4bc9bcf20b0 379 Pfam PF00199 Catalase 73 190 3.2E-11 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS29010 b5f0a56fe66881f5d0b8d4bc9bcf20b0 379 Gene3D G3DSA:2.40.180.10 38 379 6.1E-78 T 29-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.55.30.10 1 173 1.2E-58 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 287 32.132 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF64397 4 234 7.72E-70 T 29-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:1.10.287.480 183 227 2.2E-20 T 29-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 SUPERFAMILY SSF118352 226 285 2.09E-18 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 Gene3D G3DSA:3.90.1280.10 228 284 5.3E-21 T 29-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 Pfam PF01430 Hsp33 protein 5 276 6.8E-83 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM474_RS16865 d6272dddb528d41b8d6a9a4bb155e3e1 297 PIRSF PIRSF005261 1 287 3.0E-77 T 29-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 SUPERFAMILY SSF51905 6 296 3.17E-89 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 SUPERFAMILY SSF51905 482 541 3.17E-89 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 90 113 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 PIRSF PIRSF000137 1 545 1.1E-149 T 29-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 SUPERFAMILY SSF54373 298 483 1.57E-50 T 29-03-2018 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 Gene3D G3DSA:4.10.450.10 49 112 2.7E-24 T 29-03-2018 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 Gene3D G3DSA:3.30.560.10 113 495 5.1E-109 T 29-03-2018 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 Pfam PF05199 GMC oxidoreductase 397 533 1.4E-43 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS10390 3ca0f470dea4fabdbd089ebf79c6a410 559 Pfam PF00732 GMC oxidoreductase 9 302 2.1E-86 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS02800 b59c794265816c576dbae7887dd55ab9 263 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 13 225 1.1E-88 T 29-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 AM474_RS02800 b59c794265816c576dbae7887dd55ab9 263 Pfam PF08900 Domain of unknown function (DUF1845) 12 222 2.1E-79 T 29-03-2018 IPR014996 Integrating conjugative element protein, PFL4669 AM474_RS22170 ac2fd98c32d4cc9f29d61e9925e92d6e 568 Pfam PF16930 Putative porin 32 568 1.0E-225 T 29-03-2018 IPR032638 Putative bacterial porin AM474_RS22170 ac2fd98c32d4cc9f29d61e9925e92d6e 568 Gene3D G3DSA:2.40.160.10 99 568 1.3E-45 T 29-03-2018 AM474_RS22170 ac2fd98c32d4cc9f29d61e9925e92d6e 568 SUPERFAMILY SSF56935 409 568 3.48E-12 T 29-03-2018 AM474_RS22170 ac2fd98c32d4cc9f29d61e9925e92d6e 568 SUPERFAMILY SSF56935 187 361 3.48E-12 T 29-03-2018 AM474_RS22170 ac2fd98c32d4cc9f29d61e9925e92d6e 568 SUPERFAMILY SSF56935 128 150 3.48E-12 T 29-03-2018 AM474_RS11370 902d81795222cec74c793babab6bf0b7 215 Gene3D G3DSA:1.20.1260.10 45 188 6.9E-23 T 29-03-2018 IPR012347 Ferritin-related AM474_RS11370 902d81795222cec74c793babab6bf0b7 215 SUPERFAMILY SSF47240 51 183 8.57E-18 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS11370 902d81795222cec74c793babab6bf0b7 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 215 30.303 T 29-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AM474_RS11370 902d81795222cec74c793babab6bf0b7 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 53 212 9.2E-39 T 29-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AM474_RS29105 b86326bbb3313a8ad1ce03555966bca2 277 Pfam PF02673 Bacitracin resistance protein BacA 9 259 2.5E-85 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM474_RS29105 b86326bbb3313a8ad1ce03555966bca2 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.822 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM474_RS29105 b86326bbb3313a8ad1ce03555966bca2 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 1.9E-81 T 29-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AM474_RS12365 eef96c896324dd4c1a6fc58a278ec69e 452 Pfam PF06123 Inner membrane protein CreD 5 438 4.0E-166 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM474_RS12365 eef96c896324dd4c1a6fc58a278ec69e 452 PIRSF PIRSF004548 1 451 1.8E-177 T 29-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 Gene3D G3DSA:3.40.50.1000 89 236 1.8E-36 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 227 5.5E-68 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 194 7.4E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 2.1E-35 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 Gene3D G3DSA:1.10.150.240 28 88 1.9E-21 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 230 37.939 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 6.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 6.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 6.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 6.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 SUPERFAMILY SSF56784 13 226 1.06E-59 T 29-03-2018 IPR023214 HAD-like domain AM474_RS11585 2e305303c2a1be34a60be601e9426456 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 197 2.2E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS00865 5854b8ce97b2a22f82c53fd9ffc321f8 131 Pfam PF02635 DsrE/DsrF-like family 1 127 4.0E-24 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM474_RS00865 5854b8ce97b2a22f82c53fd9ffc321f8 131 SUPERFAMILY SSF75169 1 127 1.86E-34 T 29-03-2018 IPR027396 DsrEFH-like AM474_RS00865 5854b8ce97b2a22f82c53fd9ffc321f8 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 127 4.3E-44 T 29-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 AM474_RS00865 5854b8ce97b2a22f82c53fd9ffc321f8 131 Gene3D G3DSA:3.40.1260.10 1 129 1.2E-26 T 29-03-2018 AM474_RS27305 e535a33aff5f9dc6026c9f29c7552932 424 SUPERFAMILY SSF103473 19 412 7.72E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS27305 e535a33aff5f9dc6026c9f29c7552932 424 Gene3D G3DSA:1.20.1250.20 226 420 2.2E-17 T 29-03-2018 AM474_RS27305 e535a33aff5f9dc6026c9f29c7552932 424 Gene3D G3DSA:1.20.1250.20 36 225 1.3E-18 T 29-03-2018 AM474_RS27305 e535a33aff5f9dc6026c9f29c7552932 424 Pfam PF07690 Major Facilitator Superfamily 58 373 4.4E-20 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS27305 e535a33aff5f9dc6026c9f29c7552932 424 TIGRFAM TIGR00896 CynX: cyanate transporter 42 391 6.4E-135 T 29-03-2018 IPR004747 Cyanate transport system protein GO:0016021 AM474_RS24260 abad5f29bd4483fbd55dbf5a6a5600e4 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 133 3.8E-46 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM474_RS24260 abad5f29bd4483fbd55dbf5a6a5600e4 135 Pfam PF00460 Flagella basal body rod protein 11 39 8.3E-9 T 29-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 AM474_RS24260 abad5f29bd4483fbd55dbf5a6a5600e4 135 PIRSF PIRSF002889 1 135 1.6E-46 T 29-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 AM474_RS24260 abad5f29bd4483fbd55dbf5a6a5600e4 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 29-03-2018 IPR019776 Flagellar basal body rod protein, conserved site AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 Pfam PF12833 Helix-turn-helix domain 264 340 3.9E-19 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 Gene3D G3DSA:1.10.10.60 296 352 1.7E-11 T 29-03-2018 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 Gene3D G3DSA:1.10.10.60 216 295 5.2E-4 T 29-03-2018 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 SMART SM00342 257 339 5.5E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 335 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 SUPERFAMILY SSF46689 292 341 7.17E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS16190 c290256d756775f9b5f982bd7e8e6899 356 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 214 3.1E-36 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS08440 3899b057a2b165278b7d32e6da191f14 255 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 127 248 6.9E-30 T 29-03-2018 IPR018754 Protein of unknown function DUF2285 AM474_RS18125 830a0759849f291edd54aa8a1b8997fb 268 SUPERFAMILY SSF56112 35 217 8.56E-12 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS18125 830a0759849f291edd54aa8a1b8997fb 268 Gene3D G3DSA:3.90.1200.10 59 254 7.9E-10 T 29-03-2018 AM474_RS18125 830a0759849f291edd54aa8a1b8997fb 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 231 2.0E-71 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM474_RS18125 830a0759849f291edd54aa8a1b8997fb 268 PIRSF PIRSF037318 2 266 2.4E-125 T 29-03-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 AM474_RS25775 0917ac4a97da383c5c72a554e9057386 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 115 4.0E-25 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS25775 0917ac4a97da383c5c72a554e9057386 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 221 2.0E-20 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS25775 0917ac4a97da383c5c72a554e9057386 222 Gene3D G3DSA:1.10.3720.10 2 222 3.2E-40 T 29-03-2018 AM474_RS25775 0917ac4a97da383c5c72a554e9057386 222 SUPERFAMILY SSF161098 12 206 2.09E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 Pfam PF12697 Alpha/beta hydrolase family 25 251 1.9E-25 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 1.7E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.7E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.7E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 SUPERFAMILY SSF53474 5 261 4.93E-65 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05410 8ec4c9151c2a760ddd911c6e8e35c7f8 275 Gene3D G3DSA:3.40.50.1820 9 267 1.8E-51 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS14825 0c50c151c2becedf9c0d4a1c36bc77ea 568 Gene3D G3DSA:1.10.760.10 318 568 7.3E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14825 0c50c151c2becedf9c0d4a1c36bc77ea 568 SUPERFAMILY SSF46626 452 499 4.27E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14825 0c50c151c2becedf9c0d4a1c36bc77ea 568 SUPERFAMILY SSF46626 322 377 4.27E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14825 0c50c151c2becedf9c0d4a1c36bc77ea 568 SUPERFAMILY SSF46626 546 568 4.27E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS06150 7417f9835df01f8d9b5edb26736e0351 224 Pfam PF11769 Protein of unknown function (DUF3313) 15 212 2.3E-53 T 29-03-2018 IPR021747 Protein of unknown function DUF3313 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 Gene3D G3DSA:3.40.50.2300 2 128 3.6E-24 T 29-03-2018 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 SUPERFAMILY SSF46894 143 212 1.05E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 SUPERFAMILY SSF52172 1 127 2.56E-25 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 SMART SM00421 150 207 2.4E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 Pfam PF00072 Response regulator receiver domain 5 120 4.3E-23 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 8.5E-13 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.8E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.8E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.8E-7 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 SMART SM00448 3 119 3.4E-16 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07930 77980cfa848197e4d4341e2480732ce4 213 Gene3D G3DSA:1.10.10.10 129 213 4.1E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13785 25527ddf6c1c6f388c2e050e20567018 102 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 1.6E-35 T 29-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AM474_RS02185 38d0016b8115fbb7f62e0871906481ab 72 SMART SM00530 9 62 0.0057 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS02185 38d0016b8115fbb7f62e0871906481ab 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 6.3E-21 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS02185 38d0016b8115fbb7f62e0871906481ab 72 SUPERFAMILY SSF47413 2 69 5.09E-15 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS02185 38d0016b8115fbb7f62e0871906481ab 72 Gene3D G3DSA:1.10.260.40 3 72 2.6E-9 T 29-03-2018 AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 Hamap MF_00200 RNA 3'-terminal phosphate cyclase [rtcA]. 5 338 38.839 T 29-03-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 Gene3D G3DSA:3.65.10.20 5 330 3.0E-93 T 29-03-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 SUPERFAMILY SSF52913 184 278 3.92E-24 T 29-03-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 SUPERFAMILY SSF55205 271 331 9.15E-7 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 Pfam PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain 183 272 1.3E-8 T 29-03-2018 IPR013791 RNA 3'-terminal phosphate cyclase, insert domain AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 TIGRFAM TIGR03399 RNA_3prim_cycl: RNA 3'-phosphate cyclase 6 324 1.8E-126 T 29-03-2018 IPR017770 RNA 3'-terminal phosphate cyclase type 1 GO:0003963|GO:0006396 AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 Pfam PF01137 RNA 3'-terminal phosphate cyclase 12 324 2.4E-77 T 29-03-2018 IPR023797 RNA 3'-terminal phosphate cyclase domain AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 PIRSF PIRSF005378 2 339 2.6E-97 T 29-03-2018 IPR000228 RNA 3'-terminal phosphate cyclase GO:0006396 AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 156 166 - T 29-03-2018 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site AM474_RS20415 6698530cbf10ddd8d2f98010cf5c7986 341 SUPERFAMILY SSF55205 5 175 1.5E-58 T 29-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM474_RS14535 bc8b892df569b04f9a38020ce4a1247d 156 Gene3D G3DSA:1.10.3290.10 30 140 7.8E-9 T 29-03-2018 IPR003812 Fido domain AM474_RS14535 bc8b892df569b04f9a38020ce4a1247d 156 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 11 128 1.3E-24 T 29-03-2018 IPR006440 Death on curing protein GO:0016301 AM474_RS14535 bc8b892df569b04f9a38020ce4a1247d 156 Pfam PF02661 Fic/DOC family 11 93 3.6E-9 T 29-03-2018 IPR003812 Fido domain AM474_RS14535 bc8b892df569b04f9a38020ce4a1247d 156 SUPERFAMILY SSF140931 59 129 1.44E-6 T 29-03-2018 IPR003812 Fido domain AM474_RS15760 7c51514225cff7b2498fbf17afcc2c6e 68 Gene3D G3DSA:1.10.260.40 2 68 1.5E-11 T 29-03-2018 AM474_RS15760 7c51514225cff7b2498fbf17afcc2c6e 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 2.5E-23 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS15760 7c51514225cff7b2498fbf17afcc2c6e 68 SMART SM00530 5 61 1.5E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS15760 7c51514225cff7b2498fbf17afcc2c6e 68 SUPERFAMILY SSF47413 1 65 1.47E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 Gene3D G3DSA:3.40.190.10 181 271 5.5E-26 T 29-03-2018 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 Gene3D G3DSA:1.10.10.10 1 81 4.6E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.1E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 Pfam PF03466 LysR substrate binding domain 88 292 8.2E-42 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 SUPERFAMILY SSF46785 2 87 3.81E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 SUPERFAMILY SSF53850 88 295 3.49E-37 T 29-03-2018 AM474_RS16740 98d6fb5ebd8cdfff9dca073a15db4198 304 Gene3D G3DSA:3.40.190.10 89 180 2.4E-22 T 29-03-2018 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 402 1.7E-106 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 Pfam PF01566 Natural resistance-associated macrophage protein 50 407 1.2E-131 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 434 39.808 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 214 237 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 318 337 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 346 363 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS21735 80d19c5b86af7d42b90e7194524e68a0 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 378 397 2.0E-57 T 29-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 AM474_RS22245 2a828f0bf9d58c7d49e50a48a32c5831 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 4.5E-16 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS22245 2a828f0bf9d58c7d49e50a48a32c5831 98 Gene3D G3DSA:3.30.70.100 1 88 1.3E-14 T 29-03-2018 AM474_RS22245 2a828f0bf9d58c7d49e50a48a32c5831 98 SUPERFAMILY SSF54909 3 83 2.02E-17 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS09880 5b3f36438db72939deeb7176e859f324 367 Pfam PF01098 Cell cycle protein 17 362 3.2E-113 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM474_RS09880 5b3f36438db72939deeb7176e859f324 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 362 8.2E-135 T 29-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AM474_RS09880 5b3f36438db72939deeb7176e859f324 367 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM474_RS14640 abaf706bf3baf3f5259b3b631a7430d3 170 Gene3D G3DSA:2.20.25.10 111 146 6.9E-4 T 29-03-2018 AM474_RS17530 220f9db024411c491c35c7a95727a011 82 Pfam PF02416 mttA/Hcf106 family 6 52 2.9E-14 T 29-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AM474_RS17530 220f9db024411c491c35c7a95727a011 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 5.8E-22 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM474_RS17530 220f9db024411c491c35c7a95727a011 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 22.946 T 29-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AM474_RS08340 9adbcbd289e4ce865b07b3b96f396f00 436 Pfam PF07690 Major Facilitator Superfamily 13 197 1.0E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS08340 9adbcbd289e4ce865b07b3b96f396f00 436 Pfam PF07690 Major Facilitator Superfamily 219 396 6.6E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS08340 9adbcbd289e4ce865b07b3b96f396f00 436 Gene3D G3DSA:1.20.1250.20 203 403 4.0E-24 T 29-03-2018 AM474_RS08340 9adbcbd289e4ce865b07b3b96f396f00 436 SUPERFAMILY SSF103473 7 391 6.67E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS08340 9adbcbd289e4ce865b07b3b96f396f00 436 Gene3D G3DSA:1.20.1250.20 2 202 3.6E-17 T 29-03-2018 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.20.200.10 133 411 6.4E-71 T 29-03-2018 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 SUPERFAMILY SSF48557 3 454 9.42E-132 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 3.4E-5 T 29-03-2018 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 3.4E-5 T 29-03-2018 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 3.4E-5 T 29-03-2018 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.275.10 2 132 3.3E-50 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Pfam PF10415 Fumarase C C-terminus 402 454 5.7E-20 T 29-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Pfam PF00206 Lyase 12 336 4.2E-86 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 78.574 T 29-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.7E-27 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.7E-27 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.7E-27 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.7E-27 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS21035 f7f9519411539de56ac61298c59fa69b 458 Gene3D G3DSA:1.10.40.30 412 455 2.1E-20 T 29-03-2018 AM474_RS25860 e16c6cc9a782aa915b317b0ca7ea7795 158 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 7.9E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS25860 e16c6cc9a782aa915b317b0ca7ea7795 158 Gene3D G3DSA:3.90.960.10 2 154 6.4E-38 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS25860 e16c6cc9a782aa915b317b0ca7ea7795 158 SUPERFAMILY SSF55826 4 152 8.5E-41 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.043 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.0E-134 T 29-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 SUPERFAMILY SSF51726 1 354 2.35E-123 T 29-03-2018 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 Gene3D G3DSA:3.20.20.210 1 355 1.0E-113 T 29-03-2018 AM474_RS17985 a62f03c76d648221a980ccaa289e46be 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 5.3E-142 T 29-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Gene3D G3DSA:3.60.20.10 15 437 3.6E-138 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Gene3D G3DSA:3.20.20.70 779 1206 2.2E-140 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Pfam PF01645 Conserved region in glutamate synthase 792 1155 6.9E-149 T 29-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 SUPERFAMILY SSF56235 15 432 5.58E-143 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Pfam PF01493 GXGXG motif 1236 1422 1.4E-77 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 SUPERFAMILY SSF69336 1212 1466 1.12E-86 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 SUPERFAMILY SSF51395 445 1187 2.2E-249 T 29-03-2018 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Pfam PF00310 Glutamine amidotransferases class-II 15 428 3.2E-173 T 29-03-2018 IPR017932 Glutamine amidotransferase type 2 domain AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Gene3D G3DSA:2.160.20.60 1211 1473 4.1E-92 T 29-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Pfam PF04898 Glutamate synthase central domain 458 736 1.2E-100 T 29-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AM474_RS17975 bcde20cf7576147f77047c0dcb7d20fd 1481 Gene3D G3DSA:3.20.20.70 438 778 5.3E-75 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS04685 dd3e34ae0b2bb34f9ce57eb937348e12 372 Gene3D G3DSA:3.60.110.10 35 368 9.3E-28 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS04685 dd3e34ae0b2bb34f9ce57eb937348e12 372 SUPERFAMILY SSF56317 62 106 1.44E-24 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS04685 dd3e34ae0b2bb34f9ce57eb937348e12 372 SUPERFAMILY SSF56317 146 284 1.44E-24 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS04685 dd3e34ae0b2bb34f9ce57eb937348e12 372 Pfam PF00795 Carbon-nitrogen hydrolase 160 285 5.1E-9 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS31260 04704c51c237485d8df1f4c132a00c01 355 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 102 1.0E-6 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31260 04704c51c237485d8df1f4c132a00c01 355 Gene3D G3DSA:1.10.540.10 2 104 5.1E-12 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS31260 04704c51c237485d8df1f4c132a00c01 355 SUPERFAMILY SSF56645 7 210 5.5E-30 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31260 04704c51c237485d8df1f4c132a00c01 355 Gene3D G3DSA:2.40.110.10 110 213 8.2E-10 T 29-03-2018 AM474_RS18925 8caa4acd482d69c22841f9587af12802 197 Pfam PF01914 MarC family integral membrane protein 2 193 7.2E-37 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM474_RS18925 8caa4acd482d69c22841f9587af12802 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 190 4.5E-32 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM474_RS00440 8c046154cac1561a24a1a8ef32c06b4d 435 Pfam PF04909 Amidohydrolase 79 369 1.1E-23 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS00440 8c046154cac1561a24a1a8ef32c06b4d 435 Gene3D G3DSA:3.20.20.140 1 372 1.5E-60 T 29-03-2018 AM474_RS00440 8c046154cac1561a24a1a8ef32c06b4d 435 SUPERFAMILY SSF51556 9 36 4.76E-76 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS00440 8c046154cac1561a24a1a8ef32c06b4d 435 SUPERFAMILY SSF51556 66 377 4.76E-76 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS31470 f4ae11b6a5cea2db882d34675be3fa09 131 Pfam PF14107 Domain of unknown function (DUF4280) 6 125 2.5E-27 T 29-03-2018 IPR025460 Protein of unknown function DUF4280 AM474_RS30745 744852a37f8f1dbc8cdbd56323103dd0 403 Pfam PF00144 Beta-lactamase 98 372 1.3E-23 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS30745 744852a37f8f1dbc8cdbd56323103dd0 403 Gene3D G3DSA:3.40.710.10 85 399 2.0E-41 T 29-03-2018 AM474_RS30745 744852a37f8f1dbc8cdbd56323103dd0 403 SUPERFAMILY SSF56601 3 390 1.13E-73 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 165 1.5E-48 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 165 4.7E-50 T 29-03-2018 AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 Gene3D G3DSA:3.40.30.10 84 166 6.2E-12 T 29-03-2018 AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 SUPERFAMILY SSF52833 15 165 3.58E-48 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01045 0a7ff7c8344ae362a8862645147ce861 166 PIRSF PIRSF000216 3 166 5.0E-52 T 29-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81301 29 185 2.4E-39 T 29-03-2018 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 446 2.9E-44 T 29-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 13 459 38.005 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 215 276 1.2E-20 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:3.30.460.10 22 184 4.5E-51 T 29-03-2018 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Gene3D G3DSA:1.10.3090.10 185 440 2.0E-44 T 29-03-2018 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 SUPERFAMILY SSF81891 186 421 1.29E-50 T 29-03-2018 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 457 2.9E-184 T 29-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 AM474_RS19615 059e15ea857ea23aa1159cdbeaaa7fd2 467 Pfam PF01743 Poly A polymerase head domain 56 188 7.5E-38 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM474_RS03330 17e8844812d8c4de75793de330b794ea 291 Hamap MF_00188 Protease HtpX [htpX]. 1 289 25.075 T 29-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AM474_RS03330 17e8844812d8c4de75793de330b794ea 291 Pfam PF01435 Peptidase family M48 77 288 1.7E-37 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS03330 17e8844812d8c4de75793de330b794ea 291 Gene3D G3DSA:3.30.2010.10 67 160 8.3E-21 T 29-03-2018 AM474_RS31480 b25af67f9d496990022f977ffeb7b36b 424 Pfam PF13343 Bacterial extracellular solute-binding protein 154 336 3.5E-10 T 29-03-2018 AM474_RS31480 b25af67f9d496990022f977ffeb7b36b 424 SUPERFAMILY SSF53850 86 374 1.58E-33 T 29-03-2018 AM474_RS31480 b25af67f9d496990022f977ffeb7b36b 424 Gene3D G3DSA:3.40.190.10 89 377 8.2E-17 T 29-03-2018 AM474_RS11650 eb089b75344aa49203e1cc496e1c5e26 933 Pfam PF03968 OstA-like protein 158 291 6.4E-11 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM474_RS11650 eb089b75344aa49203e1cc496e1c5e26 933 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 20 908 21.626 T 29-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AM474_RS11650 eb089b75344aa49203e1cc496e1c5e26 933 Gene3D G3DSA:2.60.450.10 150 305 3.8E-17 T 29-03-2018 AM474_RS11650 eb089b75344aa49203e1cc496e1c5e26 933 Pfam PF04453 Organic solvent tolerance protein 403 840 3.4E-118 T 29-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AM474_RS22895 ee028ded598c80f8ab80c0a4b8d0aa83 246 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 225 7.2E-36 T 29-03-2018 AM474_RS22895 ee028ded598c80f8ab80c0a4b8d0aa83 246 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 3 243 27.592 T 29-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 Pfam PF00293 NUDIX domain 74 184 8.3E-20 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 12 62 3.3E-13 T 29-03-2018 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 PRINTS PR00502 NUDIX hydrolase family signature 98 112 8.5E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 PRINTS PR00502 NUDIX hydrolase family signature 112 127 8.5E-5 T 29-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 ProSitePatterns PS00893 Nudix box signature. 103 124 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 SUPERFAMILY SSF55811 67 203 1.62E-33 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS23790 dffda9151bb57aa6d9a97d0f5c8fc142 212 Gene3D G3DSA:3.90.79.10 69 210 7.3E-29 T 29-03-2018 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 Pfam PF01297 Zinc-uptake complex component A periplasmic 48 310 1.3E-53 T 29-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 SUPERFAMILY SSF53807 41 313 9.81E-68 T 29-03-2018 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 67 85 4.7E-10 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 86 105 4.7E-10 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 144 163 4.7E-10 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 202 219 4.7E-10 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00691 Adhesin B signature 42 63 4.7E-10 T 29-03-2018 IPR006129 Adhesin B GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 255 273 7.5E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 202 223 7.5E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 73 86 7.5E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 PRINTS PR00690 Adhesin family signature 86 103 7.5E-9 T 29-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 32 196 2.1E-38 T 29-03-2018 AM474_RS31625 39a82e352e0afacef9d91f703d929e9d 317 Gene3D G3DSA:3.40.50.1980 197 313 1.7E-23 T 29-03-2018 AM474_RS21580 23caaa2026ac5963d774279b416bcc69 133 SUPERFAMILY SSF55021 3 66 2.2E-17 T 29-03-2018 AM474_RS21580 23caaa2026ac5963d774279b416bcc69 133 SUPERFAMILY SSF55021 70 128 2.44E-17 T 29-03-2018 AM474_RS21580 23caaa2026ac5963d774279b416bcc69 133 Pfam PF13840 ACT domain 70 126 4.4E-11 T 29-03-2018 IPR027795 GATS-like ACT domain AM474_RS21580 23caaa2026ac5963d774279b416bcc69 133 Gene3D G3DSA:3.30.2130.10 1 131 8.1E-31 T 29-03-2018 AM474_RS21580 23caaa2026ac5963d774279b416bcc69 133 Pfam PF10000 ACT domain 2 69 1.0E-27 T 29-03-2018 IPR018717 Domain of unknown function DUF2241 AM474_RS03395 9f19922f9a4ce28f3ea751ad7d82313b 448 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 5.5E-223 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS03395 9f19922f9a4ce28f3ea751ad7d82313b 448 Gene3D G3DSA:3.20.20.70 230 395 5.3E-6 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS03395 9f19922f9a4ce28f3ea751ad7d82313b 448 Pfam PF01474 Class-II DAHP synthetase family 5 440 1.1E-207 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS03395 9f19922f9a4ce28f3ea751ad7d82313b 448 SUPERFAMILY SSF51569 2 444 2.71E-205 T 29-03-2018 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 29-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 Gene3D G3DSA:3.40.1500.10 2 301 3.0E-141 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 1.8E-132 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 56.337 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PIRSF PIRSF000166 2 302 6.2E-128 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 SUPERFAMILY SSF102886 4 301 1.1E-139 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 30 46 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 89 113 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 261 287 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 47 68 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 161 190 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 233 260 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS14740 d226d3587c5bbc473501a64bcbf10269 305 PRINTS PR00073 Coprogen oxidase signature 124 146 5.1E-88 T 29-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM474_RS26510 a75ef3a827d428437bce0dd2b0e352c1 162 Pfam PF03100 CcmE 5 131 2.1E-47 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM474_RS26510 a75ef3a827d428437bce0dd2b0e352c1 162 SUPERFAMILY SSF82093 30 137 2.22E-40 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM474_RS26510 a75ef3a827d428437bce0dd2b0e352c1 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.701 T 29-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 AM474_RS26510 a75ef3a827d428437bce0dd2b0e352c1 162 Gene3D G3DSA:2.40.50.140 27 125 3.6E-34 T 29-03-2018 AM474_RS17300 0f7842757c1845ada0a3a8ccefbd14ec 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 786 1188 3.6E-44 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AM474_RS17300 0f7842757c1845ada0a3a8ccefbd14ec 1201 Pfam PF10101 Predicted membrane protein (DUF2339) 178 533 2.8E-105 T 29-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane AM474_RS11505 bd32a9a3ddcff544ff20c9121a7bc899 114 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 20 94 3.2E-18 T 29-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative AM474_RS21025 e21e40ab0a14b6908f92076920fb4d75 449 SUPERFAMILY SSF111283 15 449 6.15E-128 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS21025 e21e40ab0a14b6908f92076920fb4d75 449 Gene3D G3DSA:3.30.2290.10 11 235 9.7E-60 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM474_RS21025 e21e40ab0a14b6908f92076920fb4d75 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 6.4E-62 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS01340 76ad7610d7578f1cf895fe0450eb0f3a 226 Gene3D G3DSA:3.40.50.850 1 210 5.3E-34 T 29-03-2018 AM474_RS01340 76ad7610d7578f1cf895fe0450eb0f3a 226 Pfam PF00857 Isochorismatase family 14 167 1.8E-27 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS01340 76ad7610d7578f1cf895fe0450eb0f3a 226 SUPERFAMILY SSF52499 4 206 3.14E-45 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS17665 c5815b6e3a3f02944af6c6c094ffddd3 198 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 8.7E-21 T 29-03-2018 IPR007813 Fimbrial assembly PilN AM474_RS08615 64dc1392336f92b4b10e37fd3db3fdfe 209 Pfam PF00857 Isochorismatase family 9 174 8.9E-31 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS08615 64dc1392336f92b4b10e37fd3db3fdfe 209 Gene3D G3DSA:3.40.50.850 2 208 6.6E-42 T 29-03-2018 AM474_RS08615 64dc1392336f92b4b10e37fd3db3fdfe 209 SUPERFAMILY SSF52499 6 187 3.92E-45 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 1.8E-109 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF54368 14 119 3.27E-18 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.30.590.10 120 458 7.0E-99 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 Gene3D G3DSA:3.10.20.70 6 119 5.3E-21 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 SUPERFAMILY SSF55931 122 456 1.57E-101 T 29-03-2018 AM474_RS13265 8554618fbdbd87a7da82997bf3cb4521 458 SMART SM01230 120 376 4.7E-96 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS30290 1045e4073706a424bbe88be22322151c 104 SUPERFAMILY SSF54292 18 100 8.65E-24 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS30290 1045e4073706a424bbe88be22322151c 104 Gene3D G3DSA:3.10.20.30 15 89 2.9E-11 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS30290 1045e4073706a424bbe88be22322151c 104 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 95 1.7E-22 T 29-03-2018 AM474_RS19610 7307f4201708fed743e1e4b620d7ec3e 162 SUPERFAMILY SSF55083 3 157 9.68E-54 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS19610 7307f4201708fed743e1e4b620d7ec3e 162 Gene3D G3DSA:3.30.70.560 1 159 8.9E-55 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS19610 7307f4201708fed743e1e4b620d7ec3e 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 5.0E-36 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS19610 7307f4201708fed743e1e4b620d7ec3e 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS19610 7307f4201708fed743e1e4b620d7ec3e 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 1.5E-43 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.7E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 Pfam PF03466 LysR substrate binding domain 97 301 4.0E-50 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 Gene3D G3DSA:3.40.190.10 101 184 3.7E-10 T 29-03-2018 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.0E-6 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 SUPERFAMILY SSF53850 98 305 1.05E-47 T 29-03-2018 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 Gene3D G3DSA:3.40.190.10 185 272 4.1E-25 T 29-03-2018 AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 SUPERFAMILY SSF46785 11 97 4.96E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS30905 2b9c4a84495a748f286eab1b3f45d943 312 Gene3D G3DSA:1.10.10.10 7 93 2.1E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS14950 9dadd1e6e5ceeff5a57ce01c758673be 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.0E-37 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM474_RS14950 9dadd1e6e5ceeff5a57ce01c758673be 156 Gene3D G3DSA:1.20.5.620 62 122 1.4E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM474_RS14950 9dadd1e6e5ceeff5a57ce01c758673be 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 4.9E-48 T 29-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 AM474_RS14950 9dadd1e6e5ceeff5a57ce01c758673be 156 SUPERFAMILY SSF81573 63 121 1.15E-14 T 29-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain AM474_RS14950 9dadd1e6e5ceeff5a57ce01c758673be 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.008 T 29-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM474_RS04970 fb650392a7af5a550c10573f07bfd793 341 Pfam PF00953 Glycosyl transferase family 4 75 227 1.4E-32 T 29-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 AM474_RS18230 404273c201b7c670b7bd894c69acd52f 425 SUPERFAMILY SSF53756 54 413 2.83E-17 T 29-03-2018 AM474_RS18230 404273c201b7c670b7bd894c69acd52f 425 Gene3D G3DSA:3.40.50.2000 211 405 6.9E-17 T 29-03-2018 AM474_RS18230 404273c201b7c670b7bd894c69acd52f 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 210 9.0E-68 T 29-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 AM474_RS22300 a9a06fe472884a73d343a185f40ce5bc 90 Pfam PF14375 Cysteine-rich CWC 30 82 1.6E-13 T 29-03-2018 IPR032720 Cysteine-rich CWC AM474_RS31045 b227ccbca0aed86c1700330df3c48e16 514 Pfam PF01435 Peptidase family M48 281 459 6.9E-13 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS31045 b227ccbca0aed86c1700330df3c48e16 514 Gene3D G3DSA:3.30.2010.10 218 317 1.3E-11 T 29-03-2018 AM474_RS04420 1af68ce814bfb8fd0b477a66eef9e44b 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 109 8.7E-35 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM474_RS04420 1af68ce814bfb8fd0b477a66eef9e44b 109 Gene3D G3DSA:1.20.120.20 4 87 2.6E-6 T 29-03-2018 AM474_RS13405 5c371130eba8bc943471d8b584150dfe 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 6.7E-24 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS13405 5c371130eba8bc943471d8b584150dfe 145 SUPERFAMILY SSF69118 6 145 3.27E-49 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS13405 5c371130eba8bc943471d8b584150dfe 145 Gene3D G3DSA:1.20.1290.10 1 145 1.3E-43 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS13405 5c371130eba8bc943471d8b584150dfe 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 76 9.7E-17 T 29-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS00650 1cfac7821a16425ee9b58a20276894d5 534 Gene3D G3DSA:3.90.226.10 271 529 5.9E-70 T 29-03-2018 AM474_RS00650 1cfac7821a16425ee9b58a20276894d5 534 Pfam PF01039 Carboxyl transferase domain 47 524 1.7E-152 T 29-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 AM474_RS00650 1cfac7821a16425ee9b58a20276894d5 534 SUPERFAMILY SSF52096 236 516 2.19E-87 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS00650 1cfac7821a16425ee9b58a20276894d5 534 SUPERFAMILY SSF52096 21 269 1.22E-75 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS00650 1cfac7821a16425ee9b58a20276894d5 534 Gene3D G3DSA:3.90.226.10 9 270 2.4E-70 T 29-03-2018 AM474_RS22740 dfac3688e1a5f15647a4f88c43590912 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 1.3E-8 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS22740 dfac3688e1a5f15647a4f88c43590912 141 SUPERFAMILY SSF54593 6 131 2.01E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22740 dfac3688e1a5f15647a4f88c43590912 141 Gene3D G3DSA:3.10.180.10 4 132 4.0E-20 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS28740 602fbe20af4d0d8447c72b2c2d686fee 469 Gene3D G3DSA:3.40.50.1820 50 453 7.9E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28740 602fbe20af4d0d8447c72b2c2d686fee 469 SUPERFAMILY SSF53474 75 192 1.27E-7 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS06930 9e22da7633ab2a2ac5d1e4c2f1dc6f46 491 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 462 1.4E-91 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS06930 9e22da7633ab2a2ac5d1e4c2f1dc6f46 491 Gene3D G3DSA:1.20.1600.10 18 467 3.2E-81 T 29-03-2018 AM474_RS06930 9e22da7633ab2a2ac5d1e4c2f1dc6f46 491 SUPERFAMILY SSF56954 2 464 1.7E-89 T 29-03-2018 AM474_RS06930 9e22da7633ab2a2ac5d1e4c2f1dc6f46 491 Pfam PF02321 Outer membrane efflux protein 282 460 5.2E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS06930 9e22da7633ab2a2ac5d1e4c2f1dc6f46 491 Pfam PF02321 Outer membrane efflux protein 61 249 3.3E-20 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS23825 84cdd045a200854149fb2f9cf0bfde35 283 SUPERFAMILY SSF53901 23 156 2.36E-11 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23825 84cdd045a200854149fb2f9cf0bfde35 283 Gene3D G3DSA:3.40.47.10 18 194 1.4E-8 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS08415 7e6806d460bcb64548d1f4002d649ec4 87 SUPERFAMILY SSF47598 40 81 1.45E-8 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM474_RS08415 7e6806d460bcb64548d1f4002d649ec4 87 Gene3D G3DSA:1.10.1220.10 1 82 3.0E-15 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 PIRSF PIRSF000103 1 288 4.1E-69 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 2.3E-44 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 Gene3D G3DSA:3.40.50.720 1 164 8.0E-32 T 29-03-2018 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 SUPERFAMILY SSF48179 164 287 1.05E-39 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 SUPERFAMILY SSF51735 3 165 8.74E-47 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 29-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 Gene3D G3DSA:1.10.1040.10 165 288 1.1E-33 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS27050 c5004bfd57a5ad0067b3eebbd7ab0c22 288 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 9.3E-35 T 29-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 Gene3D G3DSA:3.90.950.10 2 195 4.1E-66 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 Pfam PF02545 Maf-like protein 4 187 4.7E-54 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 Hamap MF_00528 Septum formation protein Maf [maf]. 3 192 33.506 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 PIRSF PIRSF006305 1 194 6.2E-49 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 186 2.6E-53 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS20995 ebad2c86b09f12c74dda4d53bf6d645c 201 SUPERFAMILY SSF52972 2 187 7.19E-59 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS02985 0666c87d678e5f1df6f921fc1df079e2 594 Gene3D G3DSA:3.40.50.300 1 378 7.0E-23 T 29-03-2018 AM474_RS02985 0666c87d678e5f1df6f921fc1df079e2 594 SUPERFAMILY SSF52540 187 362 1.93E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02985 0666c87d678e5f1df6f921fc1df079e2 594 SUPERFAMILY SSF52540 1 131 1.93E-16 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02985 0666c87d678e5f1df6f921fc1df079e2 594 Pfam PF13175 AAA ATPase domain 189 341 5.4E-16 T 29-03-2018 AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 195 1.9E-7 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.9E-15 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF52833 1 85 9.49E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:1.20.1050.10 91 204 2.9E-27 T 29-03-2018 AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 Gene3D G3DSA:3.40.30.10 1 90 1.1E-29 T 29-03-2018 AM474_RS02680 3da66da9afd078b74ab996f33d91ce2f 206 SUPERFAMILY SSF47616 80 201 1.81E-31 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 SUPERFAMILY SSF46689 291 341 1.08E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 3.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 3.1E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 Pfam PF12833 Helix-turn-helix domain 262 339 5.0E-15 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 31 212 4.1E-45 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 SMART SM00342 255 338 4.9E-18 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS00075 e79fc1ece5fcbdcf701ba45ccfb23f1c 361 Gene3D G3DSA:1.10.10.60 290 355 1.1E-12 T 29-03-2018 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Gene3D G3DSA:1.10.3090.10 119 409 4.0E-55 T 29-03-2018 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Pfam PF01743 Poly A polymerase head domain 4 122 8.2E-18 T 29-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 SUPERFAMILY SSF81891 120 401 5.89E-52 T 29-03-2018 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 9.3E-13 T 29-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Gene3D G3DSA:3.30.460.10 1 118 4.3E-29 T 29-03-2018 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 55.249 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 SUPERFAMILY SSF81301 1 119 2.83E-29 T 29-03-2018 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 PIRSF PIRSF000813 1 408 1.7E-201 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Pfam PF01966 HD domain 231 320 2.5E-8 T 29-03-2018 IPR006674 HD domain AM474_RS11705 a637c58402466077e0016723e4af24c4 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.285 T 29-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 AM474_RS04185 a6ad112fb16b83ef9937f49345302b92 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 3.4E-56 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS04185 a6ad112fb16b83ef9937f49345302b92 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.042 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM474_RS04185 a6ad112fb16b83ef9937f49345302b92 202 PIRSF PIRSF006102 1 202 6.3E-59 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS04185 a6ad112fb16b83ef9937f49345302b92 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 8.9E-108 T 29-03-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 12 177 1.38E-13 T 29-03-2018 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 186 302 3.4E-15 T 29-03-2018 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 353 7.4E-152 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 PIRSF PIRSF019169 1 354 9.0E-125 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 1 172 7.8E-35 T 29-03-2018 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 Gene3D G3DSA:3.30.420.40 303 354 4.6E-7 T 29-03-2018 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 3.0E-139 T 29-03-2018 IPR005883 Type IV pilus assembly protein PilM AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 SMART SM00842 12 181 7.9E-5 T 29-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 AM474_RS17660 a54a28f9eed201302b52ba8cc15f5b80 354 SUPERFAMILY SSF53067 193 352 7.47E-27 T 29-03-2018 AM474_RS31505 1d059b608c7cb02db9c30e3c500e3543 383 SUPERFAMILY SSF51395 4 376 1.22E-104 T 29-03-2018 AM474_RS31505 1d059b608c7cb02db9c30e3c500e3543 383 PIRSF PIRSF000138 1 380 3.2E-128 T 29-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 AM474_RS31505 1d059b608c7cb02db9c30e3c500e3543 383 Pfam PF01070 FMN-dependent dehydrogenase 14 376 5.3E-136 T 29-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 AM474_RS31505 1d059b608c7cb02db9c30e3c500e3543 383 Gene3D G3DSA:3.20.20.70 3 377 4.6E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS31505 1d059b608c7cb02db9c30e3c500e3543 383 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 29-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 AM474_RS00190 3fe120eeb11ab3124678680eb9b0ed18 299 SUPERFAMILY SSF103481 39 141 4.32E-12 T 29-03-2018 AM474_RS00190 3fe120eeb11ab3124678680eb9b0ed18 299 Pfam PF00892 EamA-like transporter family 18 139 3.8E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS00190 3fe120eeb11ab3124678680eb9b0ed18 299 Pfam PF00892 EamA-like transporter family 154 282 1.4E-16 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS00190 3fe120eeb11ab3124678680eb9b0ed18 299 SUPERFAMILY SSF103481 190 286 1.14E-12 T 29-03-2018 AM474_RS08515 de6eef8fd84788a6232a3a6d9385240a 701 SUPERFAMILY SSF55874 44 216 2.87E-16 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS08515 de6eef8fd84788a6232a3a6d9385240a 701 Gene3D G3DSA:3.30.565.10 57 254 5.7E-18 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS08515 de6eef8fd84788a6232a3a6d9385240a 701 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 56 195 3.6E-20 T 29-03-2018 AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 8.5E-58 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 Pfam PF02527 rRNA small subunit methyltransferase G 28 207 1.3E-62 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 SUPERFAMILY SSF53335 13 212 3.28E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 209 27.9 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 PIRSF PIRSF003078 5 214 1.2E-60 T 29-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AM474_RS14920 4e828824a2364c7d328db8e624fa7594 214 Gene3D G3DSA:3.40.50.150 2 214 5.6E-30 T 29-03-2018 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 Gene3D G3DSA:3.40.1190.20 1 308 7.6E-88 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 PRINTS PR00990 Ribokinase signature 175 190 2.2E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 PRINTS PR00990 Ribokinase signature 106 119 2.2E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 PRINTS PR00990 Ribokinase signature 219 230 2.2E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 PRINTS PR00990 Ribokinase signature 34 53 2.2E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 PRINTS PR00990 Ribokinase signature 7 28 2.2E-36 T 29-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 301 2.1E-119 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 Hamap MF_01987 Ribokinase [rbsK]. 3 303 27.76 T 29-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 29-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 Pfam PF00294 pfkB family carbohydrate kinase 3 296 9.8E-75 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM474_RS29060 7070edb8d03fe01f1831ad7aa497e739 308 SUPERFAMILY SSF53613 3 303 2.18E-89 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:3.40.50.80 119 251 1.3E-26 T 29-03-2018 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF52343 108 250 3.67E-37 T 29-03-2018 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 29-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF63380 13 117 1.86E-29 T 29-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 359 1.5E-12 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 164 175 2.0E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 2.0E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 2.0E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 2.0E-5 T 29-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:3.10.20.30 252 366 6.1E-31 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00175 Oxidoreductase NAD-binding domain 128 234 3.1E-14 T 29-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 SUPERFAMILY SSF54292 243 365 7.6E-29 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Gene3D G3DSA:2.40.30.10 11 114 1.1E-24 T 29-03-2018 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 220 228 4.4E-9 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 127 146 4.4E-9 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 164 175 4.4E-9 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 104 118 4.4E-9 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 PRINTS PR00406 Cytochrome B5 reductase signature 67 74 4.4E-9 T 29-03-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 AM474_RS15720 4ff46b9c7d1c2c609b297d4dab243c92 366 Pfam PF00970 Oxidoreductase FAD-binding domain 25 116 5.4E-17 T 29-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 AM474_RS30890 91f14379616844da83bb1d8e78684953 291 SUPERFAMILY SSF51197 22 277 1.42E-54 T 29-03-2018 AM474_RS30890 91f14379616844da83bb1d8e78684953 291 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 43 275 1.9E-38 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS30890 91f14379616844da83bb1d8e78684953 291 Gene3D G3DSA:3.60.130.10 1 291 6.7E-55 T 29-03-2018 AM474_RS19405 a67dec62ebdc963ba95977169ef7f3c8 176 Pfam PF04355 SmpA / OmlA family 35 101 1.9E-25 T 29-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AM474_RS19405 a67dec62ebdc963ba95977169ef7f3c8 176 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 147 45.134 T 29-03-2018 IPR026592 Outer membrane protein assembly factor BamE AM474_RS19405 a67dec62ebdc963ba95977169ef7f3c8 176 Gene3D G3DSA:3.30.1450.10 35 103 6.8E-13 T 29-03-2018 AM474_RS10095 746604e592504468c140993653c812b7 265 Gene3D G3DSA:3.40.50.1980 125 264 1.7E-21 T 29-03-2018 AM474_RS10095 746604e592504468c140993653c812b7 265 SUPERFAMILY SSF53807 19 261 8.24E-52 T 29-03-2018 AM474_RS10095 746604e592504468c140993653c812b7 265 Pfam PF01497 Periplasmic binding protein 22 218 3.2E-24 T 29-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AM474_RS10095 746604e592504468c140993653c812b7 265 Gene3D G3DSA:3.40.50.1980 18 124 4.4E-27 T 29-03-2018 AM474_RS25630 a94de2220f7b393d196249b623d7d6f3 452 SUPERFAMILY SSF103473 239 441 1.11E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25630 a94de2220f7b393d196249b623d7d6f3 452 SUPERFAMILY SSF103473 6 188 1.11E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS25630 a94de2220f7b393d196249b623d7d6f3 452 Gene3D G3DSA:1.20.1250.20 3 194 1.9E-27 T 29-03-2018 AM474_RS25630 a94de2220f7b393d196249b623d7d6f3 452 Pfam PF07690 Major Facilitator Superfamily 12 401 2.9E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25630 a94de2220f7b393d196249b623d7d6f3 452 Gene3D G3DSA:1.20.1250.20 250 442 7.3E-19 T 29-03-2018 AM474_RS14665 fff95ed1e230e58aefce34036f943fa9 71 Pfam PF07311 Dodecin 6 68 3.1E-31 T 29-03-2018 IPR009923 Dodecin AM474_RS14665 fff95ed1e230e58aefce34036f943fa9 71 Gene3D G3DSA:3.30.1660.10 5 69 2.6E-32 T 29-03-2018 IPR025543 Dodecin-like AM474_RS14665 fff95ed1e230e58aefce34036f943fa9 71 SUPERFAMILY SSF89807 6 69 1.44E-27 T 29-03-2018 IPR009923 Dodecin AM474_RS04205 f551b894c429a06a24b472ecaa9af635 445 Pfam PF11973 NQRA C-terminal domain 260 309 1.1E-21 T 29-03-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 AM474_RS04205 f551b894c429a06a24b472ecaa9af635 445 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 445 46.097 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM474_RS04205 f551b894c429a06a24b472ecaa9af635 445 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 8.7E-112 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM474_RS04205 f551b894c429a06a24b472ecaa9af635 445 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 445 3.1E-204 T 29-03-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 AM474_RS03295 8116240e94ad076ed3f36b99e2776f49 296 Gene3D G3DSA:3.40.50.300 52 199 4.4E-13 T 29-03-2018 AM474_RS03295 8116240e94ad076ed3f36b99e2776f49 296 SUPERFAMILY SSF52540 54 189 7.64E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03295 8116240e94ad076ed3f36b99e2776f49 296 Pfam PF05673 Protein of unknown function (DUF815) 34 289 3.0E-104 T 29-03-2018 IPR008533 Domain of unknown function DUF815 AM474_RS15375 41c5a7c0ab6581ca77894934407add6f 186 Gene3D G3DSA:3.40.630.30 22 183 3.8E-16 T 29-03-2018 AM474_RS15375 41c5a7c0ab6581ca77894934407add6f 186 SUPERFAMILY SSF55729 28 169 1.44E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS25255 f5072b0ba60621d82f145e9daf59d76f 296 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 279 17.774 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AM474_RS25255 f5072b0ba60621d82f145e9daf59d76f 296 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 229 8.7E-50 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AM474_RS25255 f5072b0ba60621d82f145e9daf59d76f 296 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 1 262 3.0E-115 T 29-03-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 AM474_RS25255 f5072b0ba60621d82f145e9daf59d76f 296 Pfam PF01867 CRISPR associated protein Cas1 118 226 2.4E-9 T 29-03-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 AM474_RS08830 f70e0679f521c5ff49fd15b5c884a946 526 Gene3D G3DSA:3.20.20.450 256 514 8.0E-81 T 29-03-2018 IPR001633 EAL domain AM474_RS08830 f70e0679f521c5ff49fd15b5c884a946 526 Pfam PF00563 EAL domain 263 498 1.2E-67 T 29-03-2018 IPR001633 EAL domain AM474_RS08830 f70e0679f521c5ff49fd15b5c884a946 526 Pfam PF12792 CSS motif domain associated with EAL 42 232 4.0E-43 T 29-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain AM474_RS08830 f70e0679f521c5ff49fd15b5c884a946 526 SMART SM00052 257 503 1.1E-97 T 29-03-2018 IPR001633 EAL domain AM474_RS08830 f70e0679f521c5ff49fd15b5c884a946 526 SUPERFAMILY SSF141868 263 507 2.88E-77 T 29-03-2018 IPR001633 EAL domain AM474_RS00595 abafa345b990aac010db3318507992d1 307 Gene3D G3DSA:3.90.180.10 1 140 3.0E-26 T 29-03-2018 AM474_RS00595 abafa345b990aac010db3318507992d1 307 Pfam PF00107 Zinc-binding dehydrogenase 140 266 8.2E-20 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS00595 abafa345b990aac010db3318507992d1 307 SUPERFAMILY SSF51735 102 266 3.49E-28 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00595 abafa345b990aac010db3318507992d1 307 SUPERFAMILY SSF50129 1 133 7.15E-18 T 29-03-2018 IPR011032 GroES-like AM474_RS00595 abafa345b990aac010db3318507992d1 307 SMART SM00829 3 304 7.0E-6 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS00595 abafa345b990aac010db3318507992d1 307 Gene3D G3DSA:3.40.50.720 141 254 9.4E-19 T 29-03-2018 AM474_RS00525 ed48870fdfd7fe293613a509a7daa01f 455 Gene3D G3DSA:2.50.20.10 159 448 4.8E-44 T 29-03-2018 AM474_RS00525 ed48870fdfd7fe293613a509a7daa01f 455 Pfam PF07044 Protein of unknown function (DUF1329) 83 428 1.9E-116 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS03905 aca33f77b3ba9d11f157b223f90ca041 337 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 2.5E-12 T 29-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AM474_RS03905 aca33f77b3ba9d11f157b223f90ca041 337 Gene3D G3DSA:3.40.50.300 12 172 3.7E-20 T 29-03-2018 AM474_RS03905 aca33f77b3ba9d11f157b223f90ca041 337 Gene3D G3DSA:1.10.8.80 215 293 4.4E-16 T 29-03-2018 AM474_RS03905 aca33f77b3ba9d11f157b223f90ca041 337 SMART SM00382 30 192 3.0E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS03905 aca33f77b3ba9d11f157b223f90ca041 337 SUPERFAMILY SSF52540 6 283 2.74E-54 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26290 45b93f208953cd1aaec3705f9ec25ec2 237 SUPERFAMILY SSF54001 71 137 4.46E-7 T 29-03-2018 AM474_RS26290 45b93f208953cd1aaec3705f9ec25ec2 237 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 74 181 2.9E-17 T 29-03-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AM474_RS26330 2c1fc2fc5d678c0f2c9aeccffb71a57e 173 Pfam PF03748 Flagellar basal body-associated protein FliL 75 173 1.9E-23 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AM474_RS28385 7380332c16d8d6fb5bf29ec0e58a40c2 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 270 4.0E-46 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS28385 7380332c16d8d6fb5bf29ec0e58a40c2 270 SUPERFAMILY SSF52096 3 269 5.15E-79 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS28385 7380332c16d8d6fb5bf29ec0e58a40c2 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS28385 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:3.90.226.10 1 220 3.2E-59 T 29-03-2018 AM474_RS28385 7380332c16d8d6fb5bf29ec0e58a40c2 270 Gene3D G3DSA:1.10.12.10 221 270 1.1E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS05650 e782bfdab555bc0f609aac7eac31b4bc 195 SUPERFAMILY SSF55729 11 178 1.51E-30 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS05650 e782bfdab555bc0f609aac7eac31b4bc 195 Gene3D G3DSA:3.40.630.30 1 195 6.0E-36 T 29-03-2018 AM474_RS05650 e782bfdab555bc0f609aac7eac31b4bc 195 Pfam PF13302 Acetyltransferase (GNAT) domain 20 152 4.5E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS31695 d0bc28487dd83f2f1aea18b7a0849c24 306 Pfam PF13557 Putative MetA-pathway of phenol degradation 57 302 9.6E-60 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AM474_RS31695 d0bc28487dd83f2f1aea18b7a0849c24 306 Gene3D G3DSA:2.40.160.20 111 258 5.5E-6 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS28455 56d65e2e6771f0526a16918cd7db4f5d 145 SUPERFAMILY SSF54637 1 142 1.15E-28 T 29-03-2018 IPR029069 HotDog domain AM474_RS28455 56d65e2e6771f0526a16918cd7db4f5d 145 Pfam PF14539 Domain of unknown function (DUF4442) 14 142 2.2E-51 T 29-03-2018 IPR027961 Protein of unknown function DUF4442 AM474_RS28455 56d65e2e6771f0526a16918cd7db4f5d 145 Gene3D G3DSA:3.10.129.10 1 145 1.3E-24 T 29-03-2018 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 Gene3D G3DSA:3.40.605.10 13 274 9.4E-77 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 SUPERFAMILY SSF53720 15 483 3.53E-147 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 Gene3D G3DSA:3.40.309.10 275 462 3.7E-67 T 29-03-2018 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS18705 936ad22c1e118693ca614ac0fa156f90 489 Pfam PF00171 Aldehyde dehydrogenase family 18 475 6.9E-150 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 217 1.7E-52 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 183 6.6E-11 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 1.9E-34 T 29-03-2018 IPR023214 HAD-like domain AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 Gene3D G3DSA:1.10.150.240 21 78 4.1E-18 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 220 35.587 T 29-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 Gene3D G3DSA:3.40.50.1000 79 225 2.0E-38 T 29-03-2018 IPR023214 HAD-like domain AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 SUPERFAMILY SSF56784 4 221 7.89E-62 T 29-03-2018 IPR023214 HAD-like domain AM474_RS05090 dcc59f8adca480a9da418e7d5162bccd 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 187 7.0E-10 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 SMART SM01232 130 222 6.8E-46 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 5.2E-23 T 29-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 6.4E-9 T 29-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 SUPERFAMILY SSF57716 218 269 1.17E-16 T 29-03-2018 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 SUPERFAMILY SSF81624 2 135 8.5E-40 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Gene3D G3DSA:1.10.8.50 132 270 1.6E-46 T 29-03-2018 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 SUPERFAMILY SSF46946 131 222 1.09E-27 T 29-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 29-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 5.0E-33 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 SMART SM00898 2 116 5.5E-55 T 29-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 44.667 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 2.7E-91 T 29-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM474_RS12935 e5cbc2685d081bce70818e4a37053a88 270 Gene3D G3DSA:3.20.190.10 1 131 2.9E-39 T 29-03-2018 AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 Pfam PF02132 RecR protein 41 78 2.3E-16 T 29-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.1E-72 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 Pfam PF13662 Toprim domain 81 170 9.6E-24 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 29-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 101.113 T 29-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 SUPERFAMILY SSF111304 3 197 4.45E-70 T 29-03-2018 IPR023627 Recombination protein RecR AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 SMART SM00493 80 164 1.5E-14 T 29-03-2018 IPR006171 TOPRIM domain AM474_RS26800 13cb6d4b99de632e187177daff6ff097 198 Gene3D G3DSA:3.40.1360.10 77 169 8.2E-33 T 29-03-2018 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:1.10.540.10 6 158 1.9E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 SUPERFAMILY SSF56645 36 281 4.58E-51 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:1.20.140.10 281 467 1.4E-37 T 29-03-2018 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Gene3D G3DSA:2.40.110.10 160 280 3.8E-22 T 29-03-2018 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 156 3.0E-10 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 SUPERFAMILY SSF47203 289 474 6.93E-40 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 7 34 3.6E-8 T 29-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 595 3.9E-30 T 29-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.1E-14 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS18060 5b724441711efbf063b26ceb08a3da40 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 451 1.5E-17 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS21940 f7d4ae390c31073622ce92535202105e 160 Pfam PF01478 Type IV leader peptidase family 5 109 3.5E-9 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 Pfam PF00005 ABC transporter 48 201 6.8E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 32 277 2.3E-125 T 29-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 SUPERFAMILY SSF52540 28 264 8.28E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 SMART SM00382 55 257 3.8E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15975 5305c3e21a4455b45a70215bb3160137 277 Gene3D G3DSA:3.40.50.300 17 275 8.4E-59 T 29-03-2018 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 11 72 6.9E-8 T 29-03-2018 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SUPERFAMILY SSF52540 302 530 3.28E-46 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 73 297 1.1E-42 T 29-03-2018 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SMART SM00382 348 522 2.3E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SMART SM00382 31 240 8.2E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF00005 ABC transporter 22 191 3.9E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.9E-296 T 29-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Pfam PF12848 ABC transporter 230 304 6.5E-11 T 29-03-2018 IPR032781 ABC-transporter extension domain AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 SUPERFAMILY SSF52540 13 244 2.8E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS20365 da2f0bddcb966a0fe0f2b69a1e6cf45e 554 Gene3D G3DSA:3.40.50.300 298 552 1.7E-57 T 29-03-2018 AM474_RS32170 3016f0c8237672ff84e8a74e3c6686fe 205 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 34 96 1.3E-6 T 29-03-2018 IPR018756 Domain of unknown function DUF2314 AM474_RS32170 3016f0c8237672ff84e8a74e3c6686fe 205 Pfam PF09951 Protein of unknown function (DUF2185) 115 198 3.3E-31 T 29-03-2018 IPR018689 Domain of unknown function DUF2185 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 275 698 1.5E-147 T 29-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 12 975 5.0E-171 T 29-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Gene3D G3DSA:2.40.50.140 921 1025 2.7E-7 T 29-03-2018 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Pfam PF02811 PHP domain 13 128 6.7E-18 T 29-03-2018 IPR004013 PHP domain GO:0003824 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 SUPERFAMILY SSF89550 11 192 1.33E-10 T 29-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Pfam PF14579 Helix-hairpin-helix motif 774 862 2.6E-21 T 29-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 11 1031 13.992 T 29-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 SMART SM00481 12 79 4.1E-10 T 29-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM474_RS22040 e1fbfe3372893da92a4183764d3a30ee 1031 Gene3D G3DSA:3.20.20.140 9 233 4.3E-39 T 29-03-2018 AM474_RS15230 45f94421b1599785156c0c193397700a 335 SMART SM00382 30 219 2.7E-17 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15230 45f94421b1599785156c0c193397700a 335 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS15230 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF52540 1 241 6.81E-82 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15230 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.30.70.260 254 335 4.7E-22 T 29-03-2018 AM474_RS15230 45f94421b1599785156c0c193397700a 335 Gene3D G3DSA:3.40.50.300 1 253 4.4E-80 T 29-03-2018 AM474_RS15230 45f94421b1599785156c0c193397700a 335 SMART SM00930 261 334 8.6E-25 T 29-03-2018 IPR018449 NIL domain AM474_RS15230 45f94421b1599785156c0c193397700a 335 Pfam PF09383 NIL domain 264 333 5.2E-19 T 29-03-2018 IPR018449 NIL domain AM474_RS15230 45f94421b1599785156c0c193397700a 335 SUPERFAMILY SSF55021 262 334 9.27E-17 T 29-03-2018 AM474_RS15230 45f94421b1599785156c0c193397700a 335 Pfam PF00005 ABC transporter 22 170 6.9E-36 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS28075 085d67ee6e1b19f09bdbedd3dbda1db4 179 Pfam PF05618 Putative ATP-dependant zinc protease 27 168 2.9E-51 T 29-03-2018 AM474_RS28075 085d67ee6e1b19f09bdbedd3dbda1db4 179 SUPERFAMILY SSF50630 27 165 6.35E-40 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS28075 085d67ee6e1b19f09bdbedd3dbda1db4 179 Gene3D G3DSA:2.40.70.10 24 159 1.0E-41 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 SMART SM00530 23 78 7.0E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 Pfam PF01381 Helix-turn-helix 24 78 4.4E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 Gene3D G3DSA:2.60.120.10 86 199 6.6E-21 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 SUPERFAMILY SSF51182 71 199 5.75E-26 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 Pfam PF07883 Cupin domain 127 193 7.2E-17 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 Gene3D G3DSA:1.10.260.40 16 85 2.8E-16 T 29-03-2018 AM474_RS18235 4357d05fbf332037ba32e4a965b35e50 199 SUPERFAMILY SSF47413 18 81 3.38E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS12690 a3694ff9795a41c914356700453ce477 170 SUPERFAMILY SSF53271 8 155 7.53E-35 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS12690 a3694ff9795a41c914356700453ce477 170 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 1 168 28.031 T 29-03-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 AM474_RS12690 a3694ff9795a41c914356700453ce477 170 Pfam PF00156 Phosphoribosyl transferase domain 20 136 1.1E-16 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS12690 a3694ff9795a41c914356700453ce477 170 Gene3D G3DSA:3.40.50.2020 1 155 5.5E-23 T 29-03-2018 AM474_RS25110 d325730c051385c8d648d63c404a5031 303 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 284 8.1E-135 T 29-03-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 AM474_RS25110 d325730c051385c8d648d63c404a5031 303 Gene3D G3DSA:3.60.110.10 3 284 1.6E-76 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS25110 d325730c051385c8d648d63c404a5031 303 Pfam PF00795 Carbon-nitrogen hydrolase 7 266 2.3E-46 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS25110 d325730c051385c8d648d63c404a5031 303 SUPERFAMILY SSF56317 1 285 3.79E-81 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS13740 d6abc9a2ab46de7d270847ffe7d0c219 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 95 2.5E-35 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit AM474_RS13740 d6abc9a2ab46de7d270847ffe7d0c219 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 53.549 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit AM474_RS13740 d6abc9a2ab46de7d270847ffe7d0c219 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 96 3.9E-26 T 29-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein AM474_RS13740 d6abc9a2ab46de7d270847ffe7d0c219 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 7.0E-39 T 29-03-2018 IPR009662 Malonate decarboxylase delta subunit AM474_RS29590 254cbefa70c3ac3ec5b1846026860a54 471 Gene3D G3DSA:1.20.1250.20 251 468 2.2E-28 T 29-03-2018 AM474_RS29590 254cbefa70c3ac3ec5b1846026860a54 471 Gene3D G3DSA:1.20.1250.20 8 197 2.4E-29 T 29-03-2018 AM474_RS29590 254cbefa70c3ac3ec5b1846026860a54 471 Pfam PF07690 Major Facilitator Superfamily 15 409 2.7E-52 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS29590 254cbefa70c3ac3ec5b1846026860a54 471 SUPERFAMILY SSF103473 247 462 7.46E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29590 254cbefa70c3ac3ec5b1846026860a54 471 SUPERFAMILY SSF103473 9 193 7.46E-65 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS09015 9a8ceef9ad927662f54873056e097c89 215 Pfam PF02230 Phospholipase/Carboxylesterase 12 213 1.5E-45 T 29-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AM474_RS09015 9a8ceef9ad927662f54873056e097c89 215 Gene3D G3DSA:3.40.50.1820 5 215 9.6E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS09015 9a8ceef9ad927662f54873056e097c89 215 SUPERFAMILY SSF53474 9 215 6.6E-48 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17395 0229a2302441b6c2cb73e60df59b997f 283 SUPERFAMILY SSF161098 87 271 9.42E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17395 0229a2302441b6c2cb73e60df59b997f 283 Gene3D G3DSA:1.10.3720.10 4 283 6.0E-36 T 29-03-2018 AM474_RS17395 0229a2302441b6c2cb73e60df59b997f 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 2.0E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS01420 d74a23b989ca8b9af6e810c01613df99 287 Pfam PF00892 EamA-like transporter family 153 283 3.8E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS01420 d74a23b989ca8b9af6e810c01613df99 287 Pfam PF00892 EamA-like transporter family 14 140 1.7E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS01420 d74a23b989ca8b9af6e810c01613df99 287 SUPERFAMILY SSF103481 194 285 9.68E-13 T 29-03-2018 AM474_RS01420 d74a23b989ca8b9af6e810c01613df99 287 SUPERFAMILY SSF103481 44 143 1.57E-9 T 29-03-2018 AM474_RS19410 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Gene3D G3DSA:1.10.10.10 3 89 2.1E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19410 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 SUPERFAMILY SSF46785 6 131 4.89E-41 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS19410 0fc4f1cf0a34ed8f04cb6c9bbb28ae2b 134 Pfam PF01475 Ferric uptake regulator family 9 129 1.4E-45 T 29-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 14 829 1.1E-285 T 29-03-2018 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 Gene3D G3DSA:1.10.10.160 107 214 3.3E-31 T 29-03-2018 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 Gene3D G3DSA:1.10.486.10 464 672 7.5E-73 T 29-03-2018 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 SUPERFAMILY SSF52540 389 826 5.84E-93 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 13 1166 20.217 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 14 1128 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 SUPERFAMILY SSF52540 13 374 1.86E-102 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 PIRSF PIRSF000980 13 1171 0.0 T 29-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 AM474_RS21990 19e121e017693cdfa58f3880f12b9879 1171 SUPERFAMILY SSF52980 841 1163 7.51E-63 T 29-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM474_RS00750 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 179 5.7E-56 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM474_RS00750 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 PIRSF PIRSF000847 1 186 8.8E-51 T 29-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM474_RS00750 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 7.0E-18 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS00750 f4d6e8cd1e0eab05dd7ffbef396b04f0 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS17925 94246805fba38cc8542663bca73eda0f 207 Pfam PF11363 Protein of unknown function (DUF3164) 12 205 1.6E-81 T 29-03-2018 IPR021505 Bacteriophage B3, Orf6 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 210 3.4E-44 T 29-03-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 SMART SM00342 253 335 1.5E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 SUPERFAMILY SSF46689 288 339 2.06E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 Gene3D G3DSA:1.10.10.60 290 344 2.8E-16 T 29-03-2018 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 Pfam PF12833 Helix-turn-helix domain 259 337 1.0E-16 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 Gene3D G3DSA:1.10.10.10 217 276 0.17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 6.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS29815 2042bf5177e43319370a4a2117bd497d 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 6.9E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS24800 93cbbfc2387d81fcbdd27bc22c2e4f05 198 PIRSF PIRSF000013 1 198 5.2E-109 T 29-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 AM474_RS24800 93cbbfc2387d81fcbdd27bc22c2e4f05 198 SUPERFAMILY SSF48695 15 198 5.85E-67 T 29-03-2018 IPR011031 Multihaem cytochrome AM474_RS24800 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 192 2.4E-76 T 29-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal AM474_RS24800 93cbbfc2387d81fcbdd27bc22c2e4f05 198 Gene3D G3DSA:1.10.468.10 67 196 2.2E-28 T 29-03-2018 AM474_RS24800 93cbbfc2387d81fcbdd27bc22c2e4f05 198 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 8 193 8.8E-104 T 29-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 AM474_RS12680 c9a509cc581483c2ee372c99ad7e2fe3 189 SUPERFAMILY SSF143456 7 189 1.3E-61 T 29-03-2018 AM474_RS12680 c9a509cc581483c2ee372c99ad7e2fe3 189 Gene3D G3DSA:3.40.1740.10 107 181 4.6E-10 T 29-03-2018 AM474_RS12680 c9a509cc581483c2ee372c99ad7e2fe3 189 Gene3D G3DSA:3.40.1740.10 1 98 2.5E-28 T 29-03-2018 AM474_RS12680 c9a509cc581483c2ee372c99ad7e2fe3 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 189 36.972 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AM474_RS12680 c9a509cc581483c2ee372c99ad7e2fe3 189 Pfam PF02622 Uncharacterized ACR, COG1678 18 176 7.9E-47 T 29-03-2018 IPR003774 Protein of unknown function UPF0301 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12833 Helix-turn-helix domain 221 298 2.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 2.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 2.0E-5 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 201 246 1.97E-5 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 SMART SM00342 215 297 3.8E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:2.60.120.280 13 183 2.8E-11 T 29-03-2018 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:1.10.10.60 192 252 3.2E-10 T 29-03-2018 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 SUPERFAMILY SSF46689 251 299 1.97E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 Gene3D G3DSA:1.10.10.60 253 301 5.2E-15 T 29-03-2018 AM474_RS31270 19292a3ea69ed996a0a0b53fdc2d8513 301 Pfam PF12852 Cupin 11 182 1.9E-30 T 29-03-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 SUPERFAMILY SSF46785 17 98 8.07E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 Pfam PF03466 LysR substrate binding domain 109 306 5.2E-20 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 Gene3D G3DSA:3.40.190.10 185 276 3.0E-15 T 29-03-2018 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 57 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 4.6E-7 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 Gene3D G3DSA:1.10.10.10 16 101 2.5E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 SUPERFAMILY SSF53850 109 307 1.99E-25 T 29-03-2018 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 4.9E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03840 8a87266eb21bc427d735ed48a04e05d5 308 Gene3D G3DSA:3.40.190.10 106 184 9.2E-8 T 29-03-2018 AM474_RS28585 32468be9e7ff0f6b1e7ac565423c571f 273 Gene3D G3DSA:3.90.1200.10 81 241 6.9E-10 T 29-03-2018 AM474_RS28585 32468be9e7ff0f6b1e7ac565423c571f 273 SUPERFAMILY SSF56112 25 256 1.25E-29 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS28585 32468be9e7ff0f6b1e7ac565423c571f 273 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 13 250 1.4E-102 T 29-03-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 Gene3D G3DSA:3.40.50.1820 39 310 5.8E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 103 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 250 264 1.2E-16 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 88 103 2.9E-8 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 147 160 2.9E-8 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 PRINTS PR00412 Epoxide hydrolase signature 281 303 2.9E-8 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 Pfam PF12697 Alpha/beta hydrolase family 65 298 3.0E-26 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS03945 3c04120cf62d4f7709d53a1116b383a9 315 SUPERFAMILY SSF53474 37 304 7.12E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 271 2.7E-109 T 29-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 Gene3D G3DSA:3.40.50.300 4 275 1.9E-71 T 29-03-2018 AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 SMART SM00382 57 245 3.8E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 Pfam PF00005 ABC transporter 49 196 4.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS17400 35bc6199de8e78c463e64227eb3ab5f4 276 SUPERFAMILY SSF52540 47 270 1.6E-73 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 SUPERFAMILY SSF53720 12 497 8.25E-162 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 Gene3D G3DSA:3.40.309.10 281 474 1.2E-61 T 29-03-2018 AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 4.8E-164 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS29235 736e742f6553e31638d057c90712c2a7 506 Gene3D G3DSA:3.40.605.10 10 280 1.6E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS19775 6e5d15b490cdf4b8460e6e850678e86a 150 Pfam PF13511 Domain of unknown function (DUF4124) 10 67 1.6E-15 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 ProDom PD032367 ALGINATE REGULATORY ALGR3 ALGP TRANSCRIPTION TRANSCRIPTIONAL DNA-BINDING ACTIVATOR KINASES KINASE 1 123 2.0E-47 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 200 221 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 237 254 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 258 283 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 163 179 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 148 160 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 PRINTS PR01217 Proline rich extensin signature 184 196 4.1E-9 T 29-03-2018 AM474_RS16555 3f0709c319e1d47cab3a5390adfa879b 348 Gene3D G3DSA:1.20.1170.10 12 339 2.2E-6 T 29-03-2018 AM474_RS31840 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:1.10.10.10 3 84 3.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31840 610d1341910a7eec476a540ef580881d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.0E-20 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31840 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF46785 3 110 9.08E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31840 610d1341910a7eec476a540ef580881d 307 Pfam PF03466 LysR substrate binding domain 88 298 2.7E-46 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31840 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:3.40.190.10 88 175 6.0E-19 T 29-03-2018 AM474_RS31840 610d1341910a7eec476a540ef580881d 307 Gene3D G3DSA:3.40.190.10 176 265 2.7E-24 T 29-03-2018 AM474_RS31840 610d1341910a7eec476a540ef580881d 307 SUPERFAMILY SSF53850 89 301 3.98E-45 T 29-03-2018 AM474_RS30490 3be12d17fca446a816b7a5f89ad1ead1 443 Pfam PF00324 Amino acid permease 31 373 9.6E-42 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS30490 3be12d17fca446a816b7a5f89ad1ead1 443 PIRSF PIRSF006060 1 434 1.7E-62 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 Pfam PF02685 Glucokinase 14 325 8.3E-106 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 Hamap MF_00524 Glucokinase [glk]. 12 326 32.194 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 Gene3D G3DSA:3.30.420.40 1 118 1.1E-17 T 29-03-2018 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 Gene3D G3DSA:3.40.367.20 119 309 6.8E-27 T 29-03-2018 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 SUPERFAMILY SSF53067 14 327 1.65E-52 T 29-03-2018 AM474_RS05210 4c0eeba137e6ccc8ca005953ffc0f2af 331 TIGRFAM TIGR00749 glk: glucokinase 14 320 7.3E-76 T 29-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:3.30.1120.50 129 152 1.1E-5 T 29-03-2018 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:3.30.1120.50 39 68 2.9E-10 T 29-03-2018 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:3.30.1120.50 153 208 1.9E-12 T 29-03-2018 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 SUPERFAMILY SSF141571 36 209 1.88E-39 T 29-03-2018 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Gene3D G3DSA:2.160.10.20 69 128 1.8E-20 T 29-03-2018 AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 167 206 5.6E-10 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 127 166 2.3E-8 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS29220 9bfa0c3f58583dc40ea1153166ae6562 215 Pfam PF00805 Pentapeptide repeats (8 copies) 72 107 3.0E-11 T 29-03-2018 IPR001646 Pentapeptide repeat AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 SUPERFAMILY SSF52096 115 295 3.83E-61 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 SUPERFAMILY SSF52096 6 81 3.83E-61 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 137 157 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 Gene3D G3DSA:3.90.226.10 2 313 2.0E-65 T 29-03-2018 AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 124 293 2.7E-35 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS02065 ed4e15ee3bd76a77cbf1621397d4d3bd 322 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 74 6.6E-7 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 12 687 9.1E-272 T 29-03-2018 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 29-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 Gene3D G3DSA:3.30.830.10 248 412 9.2E-5 T 29-03-2018 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 Pfam PF05193 Peptidase M16 inactive domain 184 340 8.8E-12 T 29-03-2018 IPR007863 Peptidase M16, C-terminal AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 Pfam PF00675 Insulinase (Peptidase family M16) 24 144 6.0E-29 T 29-03-2018 IPR011765 Peptidase M16, N-terminal AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 SUPERFAMILY SSF63411 589 767 3.26E-19 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 Gene3D G3DSA:3.30.830.10 583 761 8.5E-11 T 29-03-2018 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 SUPERFAMILY SSF63411 11 218 9.37E-36 T 29-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM474_RS29180 b61569ad6426a8603a5e0402d799926d 774 Gene3D G3DSA:3.30.830.10 1 233 2.3E-48 T 29-03-2018 AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 260 2.3E-67 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 305 3.7E-159 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 Gene3D G3DSA:3.40.50.620 2 303 2.0E-41 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 305 56.959 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 PIRSF PIRSF002936 1 305 1.5E-155 T 29-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AM474_RS21170 8d49de4ffc9ce6e1db406f1dd145acdb 305 SUPERFAMILY SSF52402 5 209 1.65E-77 T 29-03-2018 AM474_RS22165 0f3df0d6d963c8977dbbeab7b339fa3b 248 Pfam PF13103 TonB C terminal 163 230 2.1E-6 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS22165 0f3df0d6d963c8977dbbeab7b339fa3b 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 189 238 4.2E-7 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS22165 0f3df0d6d963c8977dbbeab7b339fa3b 248 SUPERFAMILY SSF74653 71 84 7.19E-15 T 29-03-2018 AM474_RS22165 0f3df0d6d963c8977dbbeab7b339fa3b 248 SUPERFAMILY SSF74653 148 239 7.19E-15 T 29-03-2018 AM474_RS22165 0f3df0d6d963c8977dbbeab7b339fa3b 248 Gene3D G3DSA:3.30.1150.10 147 239 2.8E-10 T 29-03-2018 AM474_RS32290 8916826e5b9a236553662b1abcef8bf9 499 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 475 5.0E-129 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS32290 8916826e5b9a236553662b1abcef8bf9 499 Pfam PF02321 Outer membrane efflux protein 292 473 1.8E-30 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32290 8916826e5b9a236553662b1abcef8bf9 499 Pfam PF02321 Outer membrane efflux protein 73 266 1.1E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32290 8916826e5b9a236553662b1abcef8bf9 499 Gene3D G3DSA:1.20.1600.10 19 481 5.5E-113 T 29-03-2018 AM474_RS32290 8916826e5b9a236553662b1abcef8bf9 499 SUPERFAMILY SSF56954 2 478 9.29E-119 T 29-03-2018 AM474_RS10365 5b515835fcc1f25f63195cd27409a5f7 177 SUPERFAMILY SSF51182 36 159 1.17E-22 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS10365 5b515835fcc1f25f63195cd27409a5f7 177 Gene3D G3DSA:2.60.120.10 22 176 1.4E-17 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS10365 5b515835fcc1f25f63195cd27409a5f7 177 Pfam PF07883 Cupin domain 75 131 4.2E-7 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 PIRSF PIRSF006337 3 579 1.5E-225 T 29-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Gene3D G3DSA:2.60.40.1180 510 580 8.5E-14 T 29-03-2018 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Gene3D G3DSA:1.10.10.760 437 470 6.1E-17 T 29-03-2018 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Pfam PF11941 Domain of unknown function (DUF3459) 487 576 1.6E-16 T 29-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Pfam PF00128 Alpha amylase, catalytic domain 133 211 2.3E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 SUPERFAMILY SSF51445 89 498 6.34E-102 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 SUPERFAMILY SSF81296 5 92 3.85E-22 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 7 70 4.2E-7 T 29-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Gene3D G3DSA:3.20.20.80 86 436 4.8E-69 T 29-03-2018 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 Gene3D G3DSA:2.60.40.10 3 85 1.4E-21 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 19 536 4.0E-196 T 29-03-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS30160 fe448c647bbc07da251bbdb29b4021bc 583 SMART SM00642 114 495 6.5E-8 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 SMART SM00062 32 253 5.5E-63 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 SUPERFAMILY SSF53850 1 252 9.31E-69 T 29-03-2018 AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 Gene3D G3DSA:3.40.190.10 174 257 2.6E-8 T 29-03-2018 AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 SMART SM00079 32 252 0.0085 T 29-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 6.7E-60 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS30345 1c906324b22d9eebebca43e3ac7ad353 268 Gene3D G3DSA:3.40.190.10 21 173 1.1E-41 T 29-03-2018 AM474_RS04495 3da9425331640b1058d7421bccd1d623 634 Pfam PF00246 Zinc carboxypeptidase 86 272 2.6E-17 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AM474_RS04495 3da9425331640b1058d7421bccd1d623 634 SUPERFAMILY SSF53187 75 373 5.95E-39 T 29-03-2018 AM474_RS04495 3da9425331640b1058d7421bccd1d623 634 Gene3D G3DSA:3.40.630.10 67 367 2.7E-36 T 29-03-2018 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 92 197 1.7E-32 T 29-03-2018 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 29-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 89 181 3.49E-35 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.382 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 SUPERFAMILY SSF54211 4 88 3.67E-34 T 29-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 4.4E-65 T 29-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AM474_RS17140 34ea8fd09ec03b88f1e03687cdce9cea 197 Gene3D G3DSA:3.30.230.40 1 90 4.9E-36 T 29-03-2018 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 SUPERFAMILY SSF50331 239 360 1.87E-17 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 Gene3D G3DSA:2.40.50.100 242 292 2.6E-6 T 29-03-2018 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 SMART SM00382 30 213 6.2E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 SUPERFAMILY SSF52540 5 243 4.83E-88 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 356 2.0E-117 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 Gene3D G3DSA:2.40.50.140 293 353 8.3E-5 T 29-03-2018 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 Gene3D G3DSA:3.40.50.300 1 241 5.9E-74 T 29-03-2018 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 Pfam PF08402 TOBE domain 280 360 8.1E-16 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS07390 1851ff129ebb2cf74fbc480598cbb9a1 363 Pfam PF00005 ABC transporter 21 163 7.8E-37 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS03175 5b4c220f15b7c94b6e617bd2db244452 132 SUPERFAMILY SSF54593 12 130 6.74E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS03175 5b4c220f15b7c94b6e617bd2db244452 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 126 1.5E-6 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS03175 5b4c220f15b7c94b6e617bd2db244452 132 Gene3D G3DSA:3.10.180.10 5 131 2.5E-17 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS16990 30ab77af7a48d51631547370bcd38f98 482 PIRSF PIRSF006060 1 480 4.7E-52 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS16990 30ab77af7a48d51631547370bcd38f98 482 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 482 3.4E-207 T 29-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 AM474_RS16990 30ab77af7a48d51631547370bcd38f98 482 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 7 481 3.2E-218 T 29-03-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 AM474_RS16990 30ab77af7a48d51631547370bcd38f98 482 Pfam PF13520 Amino acid permease 13 454 1.0E-76 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS10625 aee01a6166e307f32c8548c4ac223713 324 Pfam PF00676 Dehydrogenase E1 component 16 312 8.3E-98 T 29-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 AM474_RS10625 aee01a6166e307f32c8548c4ac223713 324 SUPERFAMILY SSF52518 4 324 2.86E-101 T 29-03-2018 IPR029061 Thiamin diphosphate-binding fold AM474_RS10625 aee01a6166e307f32c8548c4ac223713 324 Gene3D G3DSA:3.40.50.970 1 324 4.8E-89 T 29-03-2018 AM474_RS25690 d32539a9b1a8f230dc3439ec131b5319 170 SUPERFAMILY SSF117074 12 169 1.7E-35 T 29-03-2018 AM474_RS25690 d32539a9b1a8f230dc3439ec131b5319 170 Gene3D G3DSA:2.60.40.10 32 160 2.5E-7 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 6 225 3.4E-98 T 29-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SMART SM00382 35 223 1.8E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Gene3D G3DSA:3.40.50.300 2 227 1.7E-65 T 29-03-2018 AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 Pfam PF00005 ABC transporter 26 174 8.6E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS04140 1c745eb8e1c5aedfbd64aefdc8290a8f 227 SUPERFAMILY SSF52540 6 225 1.73E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12225 4e4d3fdcc1c874a19e109b4c17917e38 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 40.793 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS12225 4e4d3fdcc1c874a19e109b4c17917e38 252 Gene3D G3DSA:3.20.20.370 3 250 3.0E-95 T 29-03-2018 AM474_RS12225 4e4d3fdcc1c874a19e109b4c17917e38 252 SUPERFAMILY SSF88713 3 249 2.15E-88 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS12225 4e4d3fdcc1c874a19e109b4c17917e38 252 Pfam PF03746 LamB/YcsF family 4 242 3.4E-90 T 29-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF AM474_RS15410 325a0cf1786b3d3437515fc88732c8f6 254 Pfam PF03741 Integral membrane protein TerC family 14 204 2.8E-51 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS19205 6e834c9a507eab2b06e07ff6f2866b6a 465 PIRSF PIRSF006060 1 458 8.5E-72 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS19205 6e834c9a507eab2b06e07ff6f2866b6a 465 Pfam PF13520 Amino acid permease 14 434 5.9E-52 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 Gene3D G3DSA:3.40.630.40 174 404 8.9E-56 T 29-03-2018 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF01476 LysM domain 426 468 1.8E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 SMART SM00257 425 468 5.7E-12 T 29-03-2018 IPR018392 LysM domain AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF53187 324 401 1.26E-54 T 29-03-2018 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF53187 177 273 1.26E-54 T 29-03-2018 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 Gene3D G3DSA:3.10.350.10 419 475 8.2E-13 T 29-03-2018 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF11741 AMIN domain 34 133 7.0E-23 T 29-03-2018 IPR021731 AMIN domain AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 SUPERFAMILY SSF54106 425 468 4.32E-10 T 29-03-2018 IPR018392 LysM domain AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 179 397 1.9E-46 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM474_RS18445 72247f45e10ac31053a5edb8fbb09133 475 SMART SM00646 239 397 1.8E-71 T 29-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AM474_RS26060 23567918f815bfc314df77351fd7bcda 135 Pfam PF07366 SnoaL-like polyketide cyclase 9 127 1.3E-38 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS26060 23567918f815bfc314df77351fd7bcda 135 SUPERFAMILY SSF54427 5 133 1.44E-32 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS26060 23567918f815bfc314df77351fd7bcda 135 Gene3D G3DSA:3.10.450.50 2 128 1.7E-24 T 29-03-2018 AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 SUPERFAMILY SSF55073 516 669 3.69E-48 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 Gene3D G3DSA:3.30.70.270 509 671 1.3E-57 T 29-03-2018 AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 511 667 1.9E-46 T 29-03-2018 IPR000160 GGDEF domain AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 SMART SM00267 501 671 2.5E-56 T 29-03-2018 IPR000160 GGDEF domain AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 670 1.8E-47 T 29-03-2018 IPR000160 GGDEF domain AM474_RS15310 d450ea091285f3a38f676312cb51fd0e 671 Gene3D G3DSA:1.20.58.60 2 508 9.4E-6 T 29-03-2018 AM474_RS23070 bedc60be03908a57b62fa42ba0fb3415 275 Pfam PF13452 N-terminal half of MaoC dehydratase 18 133 1.4E-8 T 29-03-2018 AM474_RS23070 bedc60be03908a57b62fa42ba0fb3415 275 SUPERFAMILY SSF54637 168 260 1.66E-13 T 29-03-2018 IPR029069 HotDog domain AM474_RS23070 bedc60be03908a57b62fa42ba0fb3415 275 Gene3D G3DSA:3.10.129.10 8 155 1.4E-17 T 29-03-2018 AM474_RS23070 bedc60be03908a57b62fa42ba0fb3415 275 SUPERFAMILY SSF54637 58 147 3.27E-8 T 29-03-2018 IPR029069 HotDog domain AM474_RS23070 bedc60be03908a57b62fa42ba0fb3415 275 Gene3D G3DSA:3.10.129.10 156 273 2.2E-17 T 29-03-2018 AM474_RS10420 2480ab8a477c504c6c22042dd6fd7918 397 Pfam PF00144 Beta-lactamase 38 385 1.2E-79 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS10420 2480ab8a477c504c6c22042dd6fd7918 397 ProSitePatterns PS00336 Beta-lactamase class-C active site. 86 93 - T 29-03-2018 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 AM474_RS10420 2480ab8a477c504c6c22042dd6fd7918 397 SUPERFAMILY SSF56601 32 387 1.98E-95 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS10420 2480ab8a477c504c6c22042dd6fd7918 397 Gene3D G3DSA:3.40.710.10 25 389 2.2E-73 T 29-03-2018 AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 216.598 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 437 1.1E-58 T 29-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 Gene3D G3DSA:3.40.50.880 253 482 2.5E-24 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 2.4E-23 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 SUPERFAMILY SSF52540 6 240 2.83E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 478 4.0E-150 T 29-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 SUPERFAMILY SSF52317 254 447 7.55E-42 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS25450 d733047c60c158a3d9d954e007ffc3ef 490 Gene3D G3DSA:3.40.50.300 3 244 2.6E-57 T 29-03-2018 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 Gene3D G3DSA:2.170.130.10 51 191 1.1E-23 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 SUPERFAMILY SSF56935 51 790 2.78E-117 T 29-03-2018 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 181 5.9E-14 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 Gene3D G3DSA:2.40.170.20 192 790 2.2E-73 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 Pfam PF00593 TonB dependent receptor 302 788 1.5E-37 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS13805 0b40564f3e7a0b92337efb9fefe8935e 790 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 773 790 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 Gene3D G3DSA:3.30.450.40 86 266 1.3E-42 T 29-03-2018 IPR029016 GAF domain-like AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 SMART SM00346 16 106 6.1E-19 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 Pfam PF01614 Bacterial transcriptional regulator 134 257 1.0E-16 T 29-03-2018 IPR014757 Transcription regulator IclR, C-terminal AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 Pfam PF09339 IclR helix-turn-helix domain 18 68 2.2E-12 T 29-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 Gene3D G3DSA:1.10.10.10 7 85 5.7E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 SUPERFAMILY SSF55781 82 261 1.42E-39 T 29-03-2018 IPR029016 GAF domain-like AM474_RS29365 1f5b2c27056c0cac3dfbae64881553a7 267 SUPERFAMILY SSF46785 16 90 3.62E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31795 1c73cf4be6ac576a25bb8a02e4c582bd 666 Pfam PF01145 SPFH domain / Band 7 family 334 552 4.5E-38 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31795 1c73cf4be6ac576a25bb8a02e4c582bd 666 SUPERFAMILY SSF117892 431 540 4.71E-11 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31795 1c73cf4be6ac576a25bb8a02e4c582bd 666 SMART SM00244 330 535 2.9E-4 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 5.6E-181 T 29-03-2018 AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 SUPERFAMILY SSF53383 6 416 3.02E-183 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 29-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 Gene3D G3DSA:3.90.1150.10 276 416 1.5E-58 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 PIRSF PIRSF000412 1 418 1.0E-169 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.241 T 29-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM474_RS31820 bc5c1d357c336569533041c588ea85fc 418 Gene3D G3DSA:3.40.640.10 37 275 2.1E-50 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 Pfam PF00375 Sodium:dicarboxylate symporter family 16 408 2.7E-97 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 152 174 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 4.1E-29 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 302 325 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 Gene3D G3DSA:1.10.3860.10 6 415 1.1E-101 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 8 435 36.459 T 29-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AM474_RS14190 a6ce199e0d9776951c4e605f9c90696b 449 SUPERFAMILY SSF118215 16 409 2.09E-106 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.0E-51 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 SUPERFAMILY SSF54111 1 99 2.09E-46 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-37 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 Pfam PF00547 Urease, gamma subunit 1 99 3.6E-47 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 PIRSF PIRSF001223 1 100 2.5E-50 T 29-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.757 T 29-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS18885 bbd98d103d66c54e6bda4ac6e100ed7c 100 Gene3D G3DSA:3.30.280.10 2 99 6.1E-48 T 29-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 AM474_RS25840 fd330fc23689aa249103a2bc6bbdb695 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 131 1.7E-10 T 29-03-2018 IPR028973 PhnB-like AM474_RS25840 fd330fc23689aa249103a2bc6bbdb695 137 Gene3D G3DSA:3.10.180.10 7 137 8.6E-26 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS25840 fd330fc23689aa249103a2bc6bbdb695 137 SUPERFAMILY SSF54593 1 134 2.6E-38 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 165 3.0E-22 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 Gene3D G3DSA:1.10.10.10 109 164 9.1E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 Pfam PF08281 Sigma-70, region 4 112 163 2.5E-16 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 Pfam PF04542 Sigma-70 region 2 15 80 9.1E-15 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 Gene3D G3DSA:1.10.1740.10 4 84 8.3E-16 T 29-03-2018 AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 SUPERFAMILY SSF88946 10 100 9.02E-15 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS28865 0585ba6662f3ffdf151be4f52a1db0cc 168 SUPERFAMILY SSF88659 90 166 2.62E-15 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS06215 2396cd716034194941c660f68d638ef3 207 Gene3D G3DSA:3.40.630.30 61 145 1.5E-11 T 29-03-2018 AM474_RS06215 2396cd716034194941c660f68d638ef3 207 Gene3D G3DSA:3.40.630.30 146 201 5.0E-13 T 29-03-2018 AM474_RS06215 2396cd716034194941c660f68d638ef3 207 Pfam PF00583 Acetyltransferase (GNAT) family 94 195 5.0E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS06215 2396cd716034194941c660f68d638ef3 207 SUPERFAMILY SSF55729 63 202 3.09E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 4.7E-16 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.7E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.7E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 SUPERFAMILY SSF46689 11 91 1.41E-18 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 Gene3D G3DSA:1.10.10.60 5 41 5.3E-13 T 29-03-2018 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 Gene3D G3DSA:1.10.357.10 87 198 1.4E-10 T 29-03-2018 AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 SUPERFAMILY SSF48498 87 195 3.91E-14 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS03610 0e45e3f49f7cac1ecab2a4f02be685af 198 Gene3D G3DSA:1.10.260.40 42 86 1.6E-12 T 29-03-2018 AM474_RS27375 50e0f67a6a206e113478a94d53f320e5 345 Pfam PF01734 Patatin-like phospholipase 7 163 4.0E-16 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM474_RS27375 50e0f67a6a206e113478a94d53f320e5 345 SUPERFAMILY SSF52151 239 339 1.18E-49 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS27375 50e0f67a6a206e113478a94d53f320e5 345 SUPERFAMILY SSF52151 3 178 1.18E-49 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS27375 50e0f67a6a206e113478a94d53f320e5 345 Gene3D G3DSA:3.40.1090.10 2 212 9.9E-36 T 29-03-2018 AM474_RS04515 f100a1920af903a31885fb00c08644a2 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 452 9.3E-158 T 29-03-2018 IPR031617 Putative exopolysaccharide exporter AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 SUPERFAMILY SSF52374 1 211 3.75E-53 T 29-03-2018 AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 210 1.1E-50 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 Gene3D G3DSA:3.40.50.620 2 214 1.5E-59 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 211 31.119 T 29-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 68 1.5E-9 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS09900 2369378cd22fdc836ea01a6363ff6484 214 Pfam PF01467 Cytidylyltransferase-like 7 184 6.9E-31 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 Gene3D G3DSA:1.10.40.30 379 446 2.1E-24 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 Pfam PF00206 Lyase 15 304 1.8E-67 T 29-03-2018 IPR022761 Fumarate lyase, N-terminal AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 Gene3D G3DSA:1.20.200.10 109 378 7.1E-85 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 29-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 3.7E-12 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 3.7E-12 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 3.7E-12 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 3.7E-12 T 29-03-2018 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 8.8E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 8.8E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 8.8E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 8.8E-25 T 29-03-2018 IPR000362 Fumarate lyase family AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 Gene3D G3DSA:1.10.275.10 3 108 1.0E-17 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 445 8.8E-20 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 SMART SM00998 367 446 5.4E-29 T 29-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 9 352 1.0E-141 T 29-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 AM474_RS13635 aa9cc98b650f3adffb9379559decc26f 459 SUPERFAMILY SSF48557 9 449 1.49E-125 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS27625 840f5fa5c384e1f8ce5f1827acfeda8b 383 PIRSF PIRSF004925 2 382 6.8E-108 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM474_RS27625 840f5fa5c384e1f8ce5f1827acfeda8b 383 SUPERFAMILY SSF103473 7 379 1.57E-50 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS27625 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 194 383 9.0E-22 T 29-03-2018 AM474_RS27625 840f5fa5c384e1f8ce5f1827acfeda8b 383 Pfam PF12832 MFS_1 like family 7 361 3.2E-85 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain AM474_RS27625 840f5fa5c384e1f8ce5f1827acfeda8b 383 Gene3D G3DSA:1.20.1250.20 4 193 4.9E-20 T 29-03-2018 AM474_RS06635 34182ce34d56b9a9b49fd43241fa2a1a 249 SUPERFAMILY SSF52540 5 233 1.15E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06635 34182ce34d56b9a9b49fd43241fa2a1a 249 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06635 34182ce34d56b9a9b49fd43241fa2a1a 249 Pfam PF00005 ABC transporter 20 160 6.7E-29 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS06635 34182ce34d56b9a9b49fd43241fa2a1a 249 Gene3D G3DSA:3.40.50.300 1 245 6.5E-53 T 29-03-2018 AM474_RS06635 34182ce34d56b9a9b49fd43241fa2a1a 249 SMART SM00382 29 211 4.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS11600 d7f3b4c64c87f4f0a3e792569eaf799e 415 SUPERFAMILY SSF161098 189 403 9.94E-44 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS11600 d7f3b4c64c87f4f0a3e792569eaf799e 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 407 2.8E-10 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS11600 d7f3b4c64c87f4f0a3e792569eaf799e 415 Gene3D G3DSA:1.10.3720.10 30 413 7.9E-45 T 29-03-2018 AM474_RS21770 8f6f2fbf55583b94e0cfa6ffc4c89674 268 Gene3D G3DSA:1.25.40.10 40 148 7.4E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS21770 8f6f2fbf55583b94e0cfa6ffc4c89674 268 Gene3D G3DSA:1.25.40.10 150 266 0.0016 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS21770 8f6f2fbf55583b94e0cfa6ffc4c89674 268 Pfam PF13174 Tetratricopeptide repeat 94 128 0.0024 T 29-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM474_RS21770 8f6f2fbf55583b94e0cfa6ffc4c89674 268 SUPERFAMILY SSF81901 71 144 9.42E-6 T 29-03-2018 AM474_RS21770 8f6f2fbf55583b94e0cfa6ffc4c89674 268 SUPERFAMILY SSF81901 186 241 9.42E-6 T 29-03-2018 AM474_RS16365 a96028a9d80ed2c27e8dbc3d5fa44eb4 86 Pfam PF04380 Membrane fusogenic activity 5 78 2.7E-24 T 29-03-2018 IPR007475 Membrane fusogenic activity AM474_RS23165 0c9994835921e02b0384498864d7e699 340 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 334 1.2E-155 T 29-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM474_RS23165 0c9994835921e02b0384498864d7e699 340 Gene3D G3DSA:3.40.630.30 1 272 8.3E-24 T 29-03-2018 AM474_RS23165 0c9994835921e02b0384498864d7e699 340 Gene3D G3DSA:2.40.40.20 273 334 2.7E-13 T 29-03-2018 AM474_RS23165 0c9994835921e02b0384498864d7e699 340 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 9.4E-138 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM474_RS23165 0c9994835921e02b0384498864d7e699 340 SUPERFAMILY SSF55729 1 334 2.41E-128 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS23165 0c9994835921e02b0384498864d7e699 340 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 334 1.8E-144 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 30 51 3.3E-50 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 60 76 3.3E-50 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 5 28 3.3E-50 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 79 97 3.3E-50 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PRINTS PR01596 Gram-negative bacterial type III secretion SycE chaperone signature 97 115 3.3E-50 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 SUPERFAMILY SSF69635 5 115 9.42E-40 T 29-03-2018 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 Pfam PF05932 Tir chaperone protein (CesT) family 9 116 5.0E-25 T 29-03-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 PIRSF PIRSF011271 1 116 7.2E-65 T 29-03-2018 IPR005416 Type III secretion chaperone SycE GO:0009405|GO:0050708 AM474_RS08915 ecba2ddad02039d1820a2e3e94d67e84 116 Gene3D G3DSA:3.30.1460.10 2 116 2.4E-21 T 29-03-2018 AM474_RS10385 47e6b15c475dce47208d3395f706d3f9 434 Pfam PF04966 Carbohydrate-selective porin, OprB family 64 424 1.9E-67 T 29-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AM474_RS10385 47e6b15c475dce47208d3395f706d3f9 434 Gene3D G3DSA:2.40.160.10 94 424 8.0E-4 T 29-03-2018 AM474_RS22220 1394868affbeb63b26252cf4f5cc9c9d 206 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 1.2E-8 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS22220 1394868affbeb63b26252cf4f5cc9c9d 206 Gene3D G3DSA:2.160.10.10 6 206 1.3E-38 T 29-03-2018 AM474_RS22220 1394868affbeb63b26252cf4f5cc9c9d 206 SUPERFAMILY SSF51161 55 202 5.54E-41 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 29-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 Gene3D G3DSA:4.10.520.10 1 90 7.8E-33 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 SUPERFAMILY SSF47729 1 90 2.94E-31 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-32 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 SMART SM00411 1 90 9.4E-43 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS28295 e5a40123298533bd77ac5fd6af139ed8 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-19 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS27435 c6b3e5ca1b095b28527ca39c8c9e9867 297 Pfam PF01758 Sodium Bile acid symporter family 12 194 5.4E-33 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AM474_RS17075 e0c4d8a837c867544495ae2e5bd39d3a 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 2.0E-17 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS17075 e0c4d8a837c867544495ae2e5bd39d3a 231 SUPERFAMILY SSF161098 10 208 1.2E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17075 e0c4d8a837c867544495ae2e5bd39d3a 231 Gene3D G3DSA:1.10.3720.10 3 225 2.1E-41 T 29-03-2018 AM474_RS17075 e0c4d8a837c867544495ae2e5bd39d3a 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 221 1.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS08070 f11d2c57f8c784bdf010c26e164d0942 141 SUPERFAMILY SSF54637 16 133 6.95E-36 T 29-03-2018 IPR029069 HotDog domain AM474_RS08070 f11d2c57f8c784bdf010c26e164d0942 141 Pfam PF03061 Thioesterase superfamily 31 103 2.5E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS08070 f11d2c57f8c784bdf010c26e164d0942 141 Gene3D G3DSA:3.10.129.10 18 141 2.4E-34 T 29-03-2018 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 Gene3D G3DSA:3.40.50.300 22 155 4.8E-6 T 29-03-2018 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 Pfam PF00196 Bacterial regulatory proteins, luxR family 765 819 3.7E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 SUPERFAMILY SSF48452 427 606 4.3E-8 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 Gene3D G3DSA:1.10.10.10 766 827 2.9E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 Gene3D G3DSA:1.25.40.10 429 765 1.3E-27 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 ProSitePatterns PS00622 LuxR-type HTH domain signature. 780 807 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 SUPERFAMILY SSF52540 12 134 1.0E-4 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 780 796 2.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 766 780 2.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 796 808 2.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 SUPERFAMILY SSF46894 756 826 2.69E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS06500 26af95ae2550c461ae486a1efc4dc63f 827 SMART SM00421 763 820 4.8E-22 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00410 7733f54c343c7aa7361ba24baee54c7b 422 SUPERFAMILY SSF103473 16 411 7.32E-51 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00410 7733f54c343c7aa7361ba24baee54c7b 422 Pfam PF07690 Major Facilitator Superfamily 31 257 2.6E-18 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00410 7733f54c343c7aa7361ba24baee54c7b 422 Gene3D G3DSA:1.20.1250.20 221 410 8.8E-25 T 29-03-2018 AM474_RS00410 7733f54c343c7aa7361ba24baee54c7b 422 Gene3D G3DSA:1.20.1250.20 11 216 4.1E-20 T 29-03-2018 AM474_RS06470 c208f37acbf593dd1c4a904e87367633 132 Pfam PF10990 Protein of unknown function (DUF2809) 40 122 5.0E-18 T 29-03-2018 IPR021257 Protein of unknown function DUF2809 AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 Pfam PF09084 NMT1/THI5 like 62 243 1.9E-20 T 29-03-2018 IPR015168 SsuA/THI5-like AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 SMART SM00062 27 250 4.3E-4 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 Gene3D G3DSA:3.40.190.10 128 330 1.5E-36 T 29-03-2018 AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 Gene3D G3DSA:3.40.190.10 22 127 4.6E-13 T 29-03-2018 AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 SUPERFAMILY SSF53850 28 247 9.5E-46 T 29-03-2018 AM474_RS09445 0cef4aba86472f771ed21ab1017caa66 337 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 28 326 8.6E-132 T 29-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 PIRSF PIRSF000484 1 385 6.9E-62 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 397 9.1E-83 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 397 6.0E-150 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF54675 6 140 4.71E-42 T 29-03-2018 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 SUPERFAMILY SSF51690 122 396 3.2E-89 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 398 48.512 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS21520 d83aa6debe17f5f2595771c9199900a9 398 Gene3D G3DSA:3.20.140.10 4 398 4.3E-102 T 29-03-2018 AM474_RS15040 5e8120becc8d6b3be41c5f59cbe08a4f 186 SUPERFAMILY SSF51161 8 139 1.52E-31 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS15040 5e8120becc8d6b3be41c5f59cbe08a4f 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.6E-4 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS15040 5e8120becc8d6b3be41c5f59cbe08a4f 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.9E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS15040 5e8120becc8d6b3be41c5f59cbe08a4f 186 Gene3D G3DSA:2.160.10.10 9 180 1.6E-33 T 29-03-2018 AM474_RS19855 89e6394f85bed0c70c6631416d5d5bfc 335 SUPERFAMILY SSF53850 27 323 1.34E-72 T 29-03-2018 AM474_RS19855 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 26 162 2.7E-18 T 29-03-2018 AM474_RS19855 89e6394f85bed0c70c6631416d5d5bfc 335 Pfam PF13343 Bacterial extracellular solute-binding protein 81 313 1.2E-27 T 29-03-2018 AM474_RS19855 89e6394f85bed0c70c6631416d5d5bfc 335 PIRSF PIRSF002825 12 334 1.3E-82 T 29-03-2018 IPR026045 Ferric binding protein AM474_RS19855 89e6394f85bed0c70c6631416d5d5bfc 335 Gene3D G3DSA:3.40.190.10 166 310 3.9E-20 T 29-03-2018 AM474_RS00780 530935f7cbf9dd49df7d97da95523475 404 Pfam PF07690 Major Facilitator Superfamily 28 362 7.2E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS00780 530935f7cbf9dd49df7d97da95523475 404 Gene3D G3DSA:1.20.1250.20 210 402 3.0E-18 T 29-03-2018 AM474_RS00780 530935f7cbf9dd49df7d97da95523475 404 SUPERFAMILY SSF103473 17 402 4.84E-49 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00780 530935f7cbf9dd49df7d97da95523475 404 Gene3D G3DSA:1.20.1250.20 8 195 2.8E-20 T 29-03-2018 AM474_RS28070 7bee29c37b7a82eab9ac52850810562a 508 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 8.2E-47 T 29-03-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices AM474_RS28070 7bee29c37b7a82eab9ac52850810562a 508 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 260 505 1.4E-94 T 29-03-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase AM474_RS26155 52317f7e05fd36ae21dc68d44bc93b8e 503 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 448 1.3E-46 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM474_RS26155 52317f7e05fd36ae21dc68d44bc93b8e 503 PIRSF PIRSF002744 1 485 1.7E-96 T 29-03-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 AM474_RS27540 7d529733a54ed64a020ab5c2dcc4f636 397 Gene3D G3DSA:2.60.200.20 15 117 5.4E-15 T 29-03-2018 AM474_RS27540 7d529733a54ed64a020ab5c2dcc4f636 397 Pfam PF00498 FHA domain 30 96 7.9E-13 T 29-03-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AM474_RS27540 7d529733a54ed64a020ab5c2dcc4f636 397 SUPERFAMILY SSF49879 19 104 2.9E-16 T 29-03-2018 IPR008984 SMAD/FHA domain GO:0005515 AM474_RS27540 7d529733a54ed64a020ab5c2dcc4f636 397 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 386 9.1E-128 T 29-03-2018 IPR017735 Type VI secretion system, FHA domain-containing protein AM474_RS29865 32735ab74cac9fe0b56c6fd502bb87ed 409 Pfam PF03573 outer membrane porin, OprD family 26 407 5.3E-145 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS29865 32735ab74cac9fe0b56c6fd502bb87ed 409 Gene3D G3DSA:2.40.160.10 30 409 1.0E-116 T 29-03-2018 AM474_RS26705 0d9784da6a67d15943fd773d8c55aa5b 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 302 5.8E-166 T 29-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 AM474_RS26705 0d9784da6a67d15943fd773d8c55aa5b 308 Pfam PF01522 Polysaccharide deacetylase 76 164 2.9E-17 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM474_RS26705 0d9784da6a67d15943fd773d8c55aa5b 308 Gene3D G3DSA:3.20.20.370 1 308 2.8E-78 T 29-03-2018 AM474_RS26705 0d9784da6a67d15943fd773d8c55aa5b 308 SUPERFAMILY SSF88713 4 303 1.51E-101 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 3.0E-66 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.9E-47 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 65.559 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 Gene3D G3DSA:2.40.40.20 1 117 4.8E-48 T 29-03-2018 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 PIRSF PIRSF006246 1 125 7.5E-50 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 SUPERFAMILY SSF50692 1 120 2.49E-46 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS19595 e6315abd66cc3c595038a661e21e1a04 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.6E-45 T 29-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 AM474_RS28595 c1cdbce98b2c5076f04e079ae816f1e7 275 Gene3D G3DSA:3.40.50.150 4 192 9.4E-35 T 29-03-2018 AM474_RS28595 c1cdbce98b2c5076f04e079ae816f1e7 275 SUPERFAMILY SSF53335 13 249 1.23E-53 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS28595 c1cdbce98b2c5076f04e079ae816f1e7 275 Pfam PF04072 Leucine carboxyl methyltransferase 19 175 9.4E-19 T 29-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 AM474_RS28595 c1cdbce98b2c5076f04e079ae816f1e7 275 PIRSF PIRSF028177 1 274 7.1E-97 T 29-03-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 481 6.8E-127 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 SUPERFAMILY SSF56954 67 484 4.58E-112 T 29-03-2018 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 SUPERFAMILY SSF56954 5 38 4.58E-112 T 29-03-2018 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 Pfam PF02321 Outer membrane efflux protein 76 266 3.9E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 Pfam PF02321 Outer membrane efflux protein 297 479 1.6E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS08370 8fbaf939cba4c46c2070fca47ed1bb81 501 Gene3D G3DSA:1.20.1600.10 26 487 3.3E-101 T 29-03-2018 AM474_RS02810 d9f2442a773f8629058e8fb3c9161f97 146 Pfam PF00436 Single-strand binding protein family 7 109 1.0E-12 T 29-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM474_RS02810 d9f2442a773f8629058e8fb3c9161f97 146 Gene3D G3DSA:2.40.50.140 1 118 1.7E-23 T 29-03-2018 AM474_RS02810 d9f2442a773f8629058e8fb3c9161f97 146 PIRSF PIRSF002070 1 146 1.0E-26 T 29-03-2018 AM474_RS02810 d9f2442a773f8629058e8fb3c9161f97 146 SUPERFAMILY SSF50249 2 134 5.83E-26 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS14730 11b473d502208c0460dd70db82c53ccd 328 SUPERFAMILY SSF48537 133 320 7.06E-34 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AM474_RS14730 11b473d502208c0460dd70db82c53ccd 328 Gene3D G3DSA:1.10.575.10 15 321 3.8E-22 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 SUPERFAMILY SSF47729 3 92 7.65E-28 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 Gene3D G3DSA:4.10.520.10 1 93 9.0E-29 T 29-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 1.6E-11 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 1.6E-11 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 1.6E-11 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 SMART SM00411 3 92 1.2E-28 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS09455 1f51be8b5f25b377479cee1b71978da1 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 3.1E-28 T 29-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 Gene3D G3DSA:1.10.287.950 431 652 2.7E-55 T 29-03-2018 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 SMART SM00283 390 651 2.3E-84 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 Pfam PF00672 HAMP domain 325 371 1.6E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 Gene3D G3DSA:1.10.287.1060 340 430 3.2E-6 T 29-03-2018 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 SUPERFAMILY SSF58104 343 652 1.57E-78 T 29-03-2018 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 618 8.4E-45 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 SMART SM01358 37 301 1.2E-38 T 29-03-2018 IPR032255 Helical bimodular sensor domain AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 SMART SM00304 376 428 22.0 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS27410 7f444fa729b8ec39d14967579597f84d 652 SMART SM00304 323 375 8.0E-12 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 46.048 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 Pfam PF00202 Aminotransferase class-III 20 400 4.7E-126 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 PIRSF PIRSF000521 28 159 1.1E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 PIRSF PIRSF000521 172 403 2.2E-32 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 SUPERFAMILY SSF53383 16 402 1.33E-127 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 Gene3D G3DSA:3.40.640.10 50 290 2.0E-81 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 400 1.4E-151 T 29-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 Gene3D G3DSA:3.90.1150.10 291 406 1.3E-32 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS23155 5769286ff8d1c9350591e6e8d9234384 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.6E-214 T 29-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 AM474_RS30360 89b10b04faa40400094399bf0cf30471 506 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 439 1.1E-135 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AM474_RS10250 c54143d2b22ea546f7e68735b9bf07ea 278 SUPERFAMILY SSF53335 53 192 3.02E-13 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10250 c54143d2b22ea546f7e68735b9bf07ea 278 Gene3D G3DSA:3.40.50.150 42 254 5.9E-9 T 29-03-2018 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 SUPERFAMILY SSF53187 300 382 1.07E-64 T 29-03-2018 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 SUPERFAMILY SSF53187 9 186 1.07E-64 T 29-03-2018 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 Pfam PF01546 Peptidase family M20/M25/M40 69 379 4.4E-41 T 29-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 9 383 51.892 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 Gene3D G3DSA:3.40.630.10 7 288 7.6E-61 T 29-03-2018 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 12 381 3.4E-162 T 29-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 29-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 SUPERFAMILY SSF55031 187 296 4.04E-30 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS24750 837acdca475ff46da2d663cc72882d7b 383 Pfam PF07687 Peptidase dimerisation domain 183 289 1.3E-27 T 29-03-2018 IPR011650 Peptidase M20, dimerisation domain AM474_RS10715 42e89470c81aee36b3333747a545838a 142 SUPERFAMILY SSF46785 5 131 3.26E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10715 42e89470c81aee36b3333747a545838a 142 Gene3D G3DSA:1.10.10.10 1 141 2.1E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10715 42e89470c81aee36b3333747a545838a 142 Pfam PF02082 Transcriptional regulator 1 81 3.4E-24 T 29-03-2018 IPR000944 Transcription regulator Rrf2-type AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 Gene3D G3DSA:1.10.10.10 222 283 1.9E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 242 258 4.8E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 228 242 4.8E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 258 270 4.8E-6 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 SUPERFAMILY SSF46894 217 282 2.55E-14 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 SMART SM00421 225 282 3.9E-12 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10340 22463037ed8de0a9f62f7f416e62a4f4 284 Pfam PF00196 Bacterial regulatory proteins, luxR family 228 280 6.0E-10 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS00735 feab23239b9e2176e9e0146a2b409013 83 SUPERFAMILY SSF143120 1 81 6.41E-25 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM474_RS00735 feab23239b9e2176e9e0146a2b409013 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 2.0E-11 T 29-03-2018 AM474_RS00735 feab23239b9e2176e9e0146a2b409013 83 Gene3D G3DSA:3.40.1620.10 1 39 1.8E-18 T 29-03-2018 AM474_RS00735 feab23239b9e2176e9e0146a2b409013 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 73 4.2E-23 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00862 145 218 9.4E-20 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.2E-18 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 SMART SM00448 1 112 2.1E-38 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:3.40.50.2300 1 120 3.7E-34 T 29-03-2018 AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 Gene3D G3DSA:1.10.10.10 121 222 3.7E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 Pfam PF00072 Response regulator receiver domain 3 112 5.7E-26 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS22420 33d9d0d58a907a3a3221d72d74fddd75 223 SUPERFAMILY SSF52172 1 173 9.68E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS22710 4135200d29a987d04c3e174ad811f4cc 415 Gene3D G3DSA:1.20.1250.20 6 208 3.4E-33 T 29-03-2018 AM474_RS22710 4135200d29a987d04c3e174ad811f4cc 415 Gene3D G3DSA:1.20.1250.20 213 409 6.3E-17 T 29-03-2018 AM474_RS22710 4135200d29a987d04c3e174ad811f4cc 415 Pfam PF07690 Major Facilitator Superfamily 22 369 2.1E-48 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS22710 4135200d29a987d04c3e174ad811f4cc 415 SUPERFAMILY SSF103473 7 405 1.57E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.0E-9 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 Pfam PF13411 MerR HTH family regulatory protein 1 67 5.7E-19 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 SMART SM00422 1 70 3.5E-24 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 Gene3D G3DSA:1.10.1660.10 1 56 3.6E-22 T 29-03-2018 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 Gene3D G3DSA:1.10.1660.10 57 125 1.0E-11 T 29-03-2018 AM474_RS08375 34db2a1edd0f04aad42223069f45d9fd 130 SUPERFAMILY SSF46955 1 109 2.89E-31 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS04585 cedf2e5eb1a9707e8ced2c7a0dd8ccf4 543 Pfam PF13584 Oxygen tolerance 13 460 1.3E-108 T 29-03-2018 IPR025738 Aerotolerance-related protein BatD AM474_RS26115 89083be731b9b2ae06e984ee82b23439 303 SUPERFAMILY SSF103481 46 144 9.68E-12 T 29-03-2018 AM474_RS26115 89083be731b9b2ae06e984ee82b23439 303 Pfam PF00892 EamA-like transporter family 12 140 2.1E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS26115 89083be731b9b2ae06e984ee82b23439 303 Pfam PF00892 EamA-like transporter family 156 292 4.0E-21 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS26115 89083be731b9b2ae06e984ee82b23439 303 SUPERFAMILY SSF103481 193 295 3.66E-15 T 29-03-2018 AM474_RS10115 1c98fd24ee16c2e18472f7f6969d2232 248 Gene3D G3DSA:3.40.190.10 135 242 4.7E-7 T 29-03-2018 AM474_RS10115 1c98fd24ee16c2e18472f7f6969d2232 248 Gene3D G3DSA:3.40.190.10 22 134 1.2E-9 T 29-03-2018 AM474_RS10115 1c98fd24ee16c2e18472f7f6969d2232 248 SUPERFAMILY SSF53850 26 234 5.61E-28 T 29-03-2018 AM474_RS10115 1c98fd24ee16c2e18472f7f6969d2232 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 233 1.6E-10 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS06615 1df10065ac59f0982ce5e688fbde8c29 262 Gene3D G3DSA:1.10.3720.10 10 253 1.4E-30 T 29-03-2018 AM474_RS06615 1df10065ac59f0982ce5e688fbde8c29 262 SUPERFAMILY SSF161098 55 236 1.11E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06615 1df10065ac59f0982ce5e688fbde8c29 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 245 1.8E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS29175 5900128c390d750fd406b3fef375c116 567 Pfam PF08019 Domain of unknown function (DUF1705) 54 203 3.0E-52 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM474_RS29175 5900128c390d750fd406b3fef375c116 567 Gene3D G3DSA:3.40.720.10 223 527 8.4E-21 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS29175 5900128c390d750fd406b3fef375c116 567 Pfam PF00884 Sulfatase 233 521 5.0E-53 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS29175 5900128c390d750fd406b3fef375c116 567 SUPERFAMILY SSF53649 234 535 3.05E-23 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS30475 012052eb320fda2b769d2e63db904838 306 Gene3D G3DSA:1.10.1040.10 174 299 5.8E-10 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS30475 012052eb320fda2b769d2e63db904838 306 Gene3D G3DSA:3.40.50.720 6 168 2.3E-19 T 29-03-2018 AM474_RS30475 012052eb320fda2b769d2e63db904838 306 SUPERFAMILY SSF51735 13 165 1.35E-22 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30475 012052eb320fda2b769d2e63db904838 306 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 13 165 1.3E-16 T 29-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 AM474_RS30475 012052eb320fda2b769d2e63db904838 306 PIRSF PIRSF000103 5 303 5.7E-75 T 29-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AM474_RS30475 012052eb320fda2b769d2e63db904838 306 SUPERFAMILY SSF48179 183 295 2.83E-6 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS08680 25764d6f2b2403b43aa9c0f5a8bacfeb 195 Gene3D G3DSA:1.10.10.690 51 194 3.8E-33 T 29-03-2018 AM474_RS08680 25764d6f2b2403b43aa9c0f5a8bacfeb 195 SUPERFAMILY SSF140804 73 184 2.22E-27 T 29-03-2018 IPR027405 YidB-like AM474_RS08680 25764d6f2b2403b43aa9c0f5a8bacfeb 195 Pfam PF06078 Bacterial protein of unknown function (DUF937) 37 177 8.4E-19 T 29-03-2018 IPR009282 Protein of unknown function DUF937 AM474_RS22530 3fdf5e8380bd78e7bff876be669d04bb 250 SUPERFAMILY SSF53850 21 245 6.84E-20 T 29-03-2018 AM474_RS22530 3fdf5e8380bd78e7bff876be669d04bb 250 Gene3D G3DSA:3.40.190.10 43 248 4.1E-5 T 29-03-2018 AM474_RS23830 76c2e8539c8f842db718ff4ba138110a 348 Gene3D G3DSA:3.40.47.10 229 345 8.9E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23830 76c2e8539c8f842db718ff4ba138110a 348 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 341 7.4E-21 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS23830 76c2e8539c8f842db718ff4ba138110a 348 SUPERFAMILY SSF53901 7 342 2.46E-41 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23830 76c2e8539c8f842db718ff4ba138110a 348 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 124 200 1.8E-18 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS23830 76c2e8539c8f842db718ff4ba138110a 348 Gene3D G3DSA:3.40.47.10 2 228 1.4E-24 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23085 c55473a23c731ddb420556a01fac405d 450 SUPERFAMILY SSF103378 2 446 5.23E-122 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM474_RS23085 c55473a23c731ddb420556a01fac405d 450 Gene3D G3DSA:1.10.4100.10 1 309 1.2E-94 T 29-03-2018 AM474_RS23085 c55473a23c731ddb420556a01fac405d 450 Pfam PF03972 MmgE/PrpD family 5 440 2.8E-136 T 29-03-2018 IPR005656 MmgE/PrpD GO:0016829 AM474_RS01935 dbf340f3af766e12d4db9d16f7f16fda 379 Pfam PF00589 Phage integrase family 171 355 1.6E-12 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS01935 dbf340f3af766e12d4db9d16f7f16fda 379 Pfam PF13102 Phage integrase SAM-like domain 46 132 1.1E-6 T 29-03-2018 IPR025269 Phage integrase SAM-like domain AM474_RS01935 dbf340f3af766e12d4db9d16f7f16fda 379 SUPERFAMILY SSF56349 50 363 1.77E-32 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS01935 dbf340f3af766e12d4db9d16f7f16fda 379 Gene3D G3DSA:1.10.150.130 34 142 1.5E-13 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS01935 dbf340f3af766e12d4db9d16f7f16fda 379 Gene3D G3DSA:1.10.443.10 166 370 3.7E-29 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS08385 1bb79ed9b947c8fc1b29cdfa3e1c6119 232 Gene3D G3DSA:1.20.1260.10 21 136 1.4E-30 T 29-03-2018 IPR012347 Ferritin-related AM474_RS08385 1bb79ed9b947c8fc1b29cdfa3e1c6119 232 Gene3D G3DSA:1.20.1260.10 137 229 1.1E-30 T 29-03-2018 IPR012347 Ferritin-related AM474_RS08385 1bb79ed9b947c8fc1b29cdfa3e1c6119 232 Pfam PF03713 Domain of unknown function (DUF305) 83 227 3.2E-44 T 29-03-2018 IPR005183 Domain of unknown function DUF305 AM474_RS25545 e0551775bc437a0f83788dd96f9ab892 310 Gene3D G3DSA:3.40.50.720 122 276 2.2E-35 T 29-03-2018 AM474_RS25545 e0551775bc437a0f83788dd96f9ab892 310 SUPERFAMILY SSF51735 97 275 2.1E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS25545 e0551775bc437a0f83788dd96f9ab892 310 Gene3D G3DSA:3.40.50.720 1 121 2.9E-10 T 29-03-2018 AM474_RS25545 e0551775bc437a0f83788dd96f9ab892 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 275 2.1E-41 T 29-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Pfam PF00005 ABC transporter 46 195 9.0E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 Gene3D G3DSA:3.40.50.300 1 275 4.2E-65 T 29-03-2018 AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SMART SM00382 52 253 3.5E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 389 5.7E-180 T 29-03-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 AM474_RS15895 5dec5f8cbdc633cc57dbed4e4e8337f0 392 SUPERFAMILY SSF52540 34 274 8.69E-70 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS11870 21e88aeb14493ef8a925616494677746 117 Pfam PF05656 Protein of unknown function (DUF805) 12 113 1.2E-32 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM474_RS17825 456ce07e5e7e7ccf1e2c2cdd6e175b4d 203 Gene3D G3DSA:1.20.1170.10 16 122 2.4E-5 T 29-03-2018 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 PIRSF PIRSF001467 1 165 2.9E-26 T 29-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 SUPERFAMILY SSF50891 2 162 4.53E-57 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.4E-13 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 5.3E-46 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS28210 704a816bda8e44edabe4ef298654f1e3 165 Gene3D G3DSA:2.40.100.10 1 165 1.8E-48 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS12465 126a713ac3b595ffa8245a0643b2c659 407 Gene3D G3DSA:3.40.50.10540 1 407 4.5E-161 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS12465 126a713ac3b595ffa8245a0643b2c659 407 Pfam PF02515 CoA-transferase family III 5 383 4.2E-133 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM474_RS12465 126a713ac3b595ffa8245a0643b2c659 407 SUPERFAMILY SSF89796 3 407 8.63E-147 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 468 1.8E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SMART SM00387 366 471 2.6E-23 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 Gene3D G3DSA:1.10.287.130 260 373 4.4E-9 T 29-03-2018 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SUPERFAMILY SSF55874 329 469 4.45E-29 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 308 5.3E-8 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SUPERFAMILY SSF47384 254 313 1.75E-11 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SMART SM00388 270 328 1.8E-5 T 29-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SUPERFAMILY SSF158472 219 267 6.41E-5 T 29-03-2018 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 SMART SM00304 217 269 3.6E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 1.4E-11 T 29-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 Pfam PF00672 HAMP domain 218 265 2.1E-9 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS05200 e1b8d11dadc1dca14dd43f8c89db7f63 473 Gene3D G3DSA:3.30.565.10 374 473 1.3E-19 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS20210 c2612aef5578aa98679eb9d6e5ef1c33 403 Gene3D G3DSA:1.20.1250.20 3 204 5.5E-21 T 29-03-2018 AM474_RS20210 c2612aef5578aa98679eb9d6e5ef1c33 403 Gene3D G3DSA:1.20.1250.20 209 402 4.3E-11 T 29-03-2018 AM474_RS20210 c2612aef5578aa98679eb9d6e5ef1c33 403 SUPERFAMILY SSF103473 5 399 1.28E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS20210 c2612aef5578aa98679eb9d6e5ef1c33 403 Pfam PF05977 Transmembrane secretion effector 9 389 2.2E-35 T 29-03-2018 IPR010290 Transmembrane secretion effector AM474_RS24005 a8f1ddf5bd7532ad59a4022dac55ca30 122 SUPERFAMILY SSF47413 15 56 5.9E-8 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS24005 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF09722 Protein of unknown function (DUF2384) 71 120 4.5E-14 T 29-03-2018 IPR024467 Domain of unknown function DUF2384 AM474_RS24005 a8f1ddf5bd7532ad59a4022dac55ca30 122 Gene3D G3DSA:3.30.1190.10 37 73 2.7E-5 T 29-03-2018 AM474_RS24005 a8f1ddf5bd7532ad59a4022dac55ca30 122 Pfam PF01381 Helix-turn-helix 21 48 1.1E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS24005 a8f1ddf5bd7532ad59a4022dac55ca30 122 Gene3D G3DSA:1.10.10.60 1 36 4.0E-8 T 29-03-2018 AM474_RS15790 83c41cbba3fb8e22fe8c772c14b9ca6b 176 Gene3D G3DSA:3.30.1380.20 22 176 7.4E-27 T 29-03-2018 AM474_RS15790 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SMART SM00989 107 175 3.7E-4 T 29-03-2018 IPR004096 4-vinyl reductase, 4VR AM474_RS15790 83c41cbba3fb8e22fe8c772c14b9ca6b 176 SUPERFAMILY SSF111126 6 144 2.98E-17 T 29-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 SMART SM00342 203 286 1.3E-27 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 SUPERFAMILY SSF46689 239 287 1.88E-11 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 Gene3D G3DSA:1.10.10.60 245 296 2.5E-12 T 29-03-2018 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 Gene3D G3DSA:1.10.10.60 189 244 1.0E-17 T 29-03-2018 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 SUPERFAMILY SSF46689 187 237 8.21E-13 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS01330 673df1a7c4672dca52954c43625bba93 297 Pfam PF12833 Helix-turn-helix domain 209 287 8.4E-22 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 SUPERFAMILY SSF47240 4 155 7.31E-48 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 Pfam PF00210 Ferritin-like domain 17 155 3.1E-28 T 29-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 6.3E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 6.3E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 6.3E-12 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 29-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 PIRSF PIRSF005900 1 156 9.1E-47 T 29-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AM474_RS23545 87366b4bbf4a500df7a09d80abdc4cc0 156 Gene3D G3DSA:1.20.1260.10 6 156 2.5E-49 T 29-03-2018 IPR012347 Ferritin-related AM474_RS29560 f9a4f422612dbf76b0f1c4338dcda446 664 SUPERFAMILY SSF56300 161 184 3.79E-7 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS29560 f9a4f422612dbf76b0f1c4338dcda446 664 SUPERFAMILY SSF56300 319 361 3.79E-7 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS29560 f9a4f422612dbf76b0f1c4338dcda446 664 SUPERFAMILY SSF56300 412 565 3.79E-7 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS29560 f9a4f422612dbf76b0f1c4338dcda446 664 Gene3D G3DSA:3.60.21.10 136 658 9.2E-32 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 Pfam PF00248 Aldo/keto reductase family 17 309 1.7E-74 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 SUPERFAMILY SSF51430 6 317 2.23E-95 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 45 69 7.4E-11 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 109 127 7.4E-11 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 PRINTS PR00069 Aldo-keto reductase signature 140 157 7.4E-11 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS24560 faf3a0b60d497fdc49f599e359ff194e 329 Gene3D G3DSA:3.20.20.100 1 323 2.6E-91 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS27845 43699cabc9b63f739801c66c43f5e2ad 214 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.1E-40 T 29-03-2018 IPR012842 Type III secretion system HrpE/YscL AM474_RS27845 43699cabc9b63f739801c66c43f5e2ad 214 Pfam PF02108 Flagellar assembly protein FliH 74 194 1.5E-17 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AM474_RS28580 15a1eb48358d56b63257675df2f33afe 484 PIRSF PIRSF006247 1 484 8.8E-165 T 29-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AM474_RS28580 15a1eb48358d56b63257675df2f33afe 484 Pfam PF02386 Cation transport protein 55 476 1.8E-50 T 29-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 192 25.649 T 29-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 Gene3D G3DSA:2.40.40.10 79 199 2.8E-26 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 SUPERFAMILY SSF50685 103 197 3.42E-12 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 Gene3D G3DSA:3.30.70.1070 260 339 1.3E-7 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 Pfam PF03330 Lytic transglycolase 101 189 5.1E-26 T 29-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 SUPERFAMILY SSF110997 265 337 3.79E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 Pfam PF05036 Sporulation related domain 265 334 5.5E-11 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS09870 493d977bd3ea38d364fa1fda440cd74c 342 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 102 193 1.3E-43 T 29-03-2018 IPR012997 Rare lipoprotein A AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 149 250 1.3E-17 T 29-03-2018 AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 Gene3D G3DSA:3.40.190.10 10 148 6.8E-38 T 29-03-2018 AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 SMART SM00062 26 248 8.0E-64 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 1.1E-65 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 29-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AM474_RS17080 e56e9aaa10da93be751989f5357be21c 250 SUPERFAMILY SSF53850 5 249 2.1E-73 T 29-03-2018 AM474_RS03800 e621dcf0f864f91ce627531f110fb9d0 261 Gene3D G3DSA:3.40.190.10 16 139 9.3E-33 T 29-03-2018 AM474_RS03800 e621dcf0f864f91ce627531f110fb9d0 261 SMART SM00062 27 256 1.0E-61 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS03800 e621dcf0f864f91ce627531f110fb9d0 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 3.0E-57 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS03800 e621dcf0f864f91ce627531f110fb9d0 261 Gene3D G3DSA:3.40.190.10 140 209 5.1E-14 T 29-03-2018 AM474_RS03800 e621dcf0f864f91ce627531f110fb9d0 261 SUPERFAMILY SSF53850 26 258 3.19E-60 T 29-03-2018 AM474_RS17645 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Gene3D G3DSA:3.40.1000.10 289 421 9.7E-4 T 29-03-2018 AM474_RS17645 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Gene3D G3DSA:3.30.2010.10 47 143 2.3E-23 T 29-03-2018 AM474_RS17645 1a2c2ca18f35c8d10923cb86a3ec12d1 479 Pfam PF01435 Peptidase family M48 60 249 3.0E-42 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 Gene3D G3DSA:2.60.120.10 77 183 4.2E-7 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 Pfam PF01381 Helix-turn-helix 11 65 4.5E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 Gene3D G3DSA:1.10.260.40 1 76 2.1E-18 T 29-03-2018 AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 SUPERFAMILY SSF47413 2 70 2.68E-17 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 SMART SM00530 10 65 7.7E-15 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS28720 3e1f705d4edcc525088f65254ca3284e 183 SUPERFAMILY SSF51182 58 180 5.15E-14 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS29725 77b9ef47753ea1d84604a67e317fcaf3 468 PIRSF PIRSF006060 8 467 3.8E-66 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS29725 77b9ef47753ea1d84604a67e317fcaf3 468 Pfam PF00324 Amino acid permease 26 433 5.4E-89 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS29725 77b9ef47753ea1d84604a67e317fcaf3 468 ProSitePatterns PS00218 Amino acid permeases signature. 50 80 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS16585 c2a0f41a632f5737fcb421a0fec5de99 633 SUPERFAMILY SSF46626 119 223 3.58E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16585 c2a0f41a632f5737fcb421a0fec5de99 633 Gene3D G3DSA:1.10.760.10 104 259 1.0E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16585 c2a0f41a632f5737fcb421a0fec5de99 633 Pfam PF03239 Iron permease FTR1 family 342 475 3.0E-12 T 29-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AM474_RS16585 c2a0f41a632f5737fcb421a0fec5de99 633 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 130 213 1.3E-11 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 SUPERFAMILY SSF51445 39 302 1.31E-54 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 Gene3D G3DSA:3.90.550.10 392 671 5.0E-46 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 Gene3D G3DSA:3.20.20.80 40 304 3.5E-38 T 29-03-2018 AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 SUPERFAMILY SSF53448 405 662 2.25E-50 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 Pfam PF13641 Glycosyltransferase like family 2 421 649 1.8E-31 T 29-03-2018 AM474_RS24755 59a4e3a796559437d241ac6fd0371a98 869 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 223 236 - T 29-03-2018 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 AM474_RS14140 5a849b0b8d3c0807f1037ae04119460a 475 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS14140 5a849b0b8d3c0807f1037ae04119460a 475 PIRSF PIRSF006060 8 472 6.7E-74 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS14140 5a849b0b8d3c0807f1037ae04119460a 475 TIGRFAM TIGR01773 GABAperm: GABA permease 1 461 2.7E-253 T 29-03-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 AM474_RS14140 5a849b0b8d3c0807f1037ae04119460a 475 Pfam PF00324 Amino acid permease 26 449 2.3E-117 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 SUPERFAMILY SSF51735 112 270 5.92E-38 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 SUPERFAMILY SSF50129 10 141 1.35E-33 T 29-03-2018 IPR011032 GroES-like AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 Gene3D G3DSA:3.90.180.10 3 132 1.9E-31 T 29-03-2018 AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 1.9E-6 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 SMART SM00829 11 322 9.8E-14 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 Gene3D G3DSA:3.40.50.720 133 292 2.2E-28 T 29-03-2018 AM474_RS01250 c34cda09fa7b951bb80efda7c890098b 324 Pfam PF00107 Zinc-binding dehydrogenase 151 256 5.6E-21 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS26180 4c84cd42d36b7ad72fd45de6567e05b7 203 SMART SM01144 2 187 2.2E-66 T 29-03-2018 IPR005636 DTW AM474_RS26180 4c84cd42d36b7ad72fd45de6567e05b7 203 Pfam PF03942 DTW domain 5 182 5.4E-49 T 29-03-2018 IPR005636 DTW AM474_RS09400 b286f54d9611c128e9b36384236c1e65 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 213 1.6E-48 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM474_RS09400 b286f54d9611c128e9b36384236c1e65 335 PIRSF PIRSF000267 2 335 3.2E-96 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM474_RS09400 b286f54d9611c128e9b36384236c1e65 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.0E-103 T 29-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AM474_RS23775 10785e5f6d87c8531ad580a7b1c510af 137 Gene3D G3DSA:3.30.1460.10 1 118 7.4E-51 T 29-03-2018 AM474_RS05470 2aea3d1c231649189e6a587a29dda920 453 SUPERFAMILY SSF53474 88 236 3.74E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05470 2aea3d1c231649189e6a587a29dda920 453 SUPERFAMILY SSF53474 264 419 3.74E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS05470 2aea3d1c231649189e6a587a29dda920 453 Gene3D G3DSA:3.40.50.1820 50 450 1.0E-20 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS14510 df383cb279eb592222a63429accacd3c 295 Gene3D G3DSA:3.60.15.10 19 258 8.1E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS14510 df383cb279eb592222a63429accacd3c 295 SUPERFAMILY SSF56281 26 253 3.08E-44 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS14510 df383cb279eb592222a63429accacd3c 295 Pfam PF00753 Metallo-beta-lactamase superfamily 47 229 3.7E-12 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS14510 df383cb279eb592222a63429accacd3c 295 SMART SM00849 44 229 3.4E-22 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS06640 f507b8866c976ddc7ba2f7fb26321bf3 274 Gene3D G3DSA:1.10.3720.10 24 267 2.3E-22 T 29-03-2018 AM474_RS06640 f507b8866c976ddc7ba2f7fb26321bf3 274 SUPERFAMILY SSF161098 68 249 4.71E-30 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06640 f507b8866c976ddc7ba2f7fb26321bf3 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 261 3.5E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05960 6f74b1fd9a4da9c0097da6f7eb0fc249 295 Pfam PF10118 Predicted metal-dependent hydrolase 10 273 5.5E-73 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS05960 6f74b1fd9a4da9c0097da6f7eb0fc249 295 Gene3D G3DSA:1.20.1260.10 27 205 1.7E-10 T 29-03-2018 IPR012347 Ferritin-related AM474_RS05960 6f74b1fd9a4da9c0097da6f7eb0fc249 295 PIRSF PIRSF007580 1 293 5.7E-120 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS15115 d8964095ae6b02053a7f96847fc5df8d 70 Gene3D G3DSA:2.30.30.100 19 69 7.1E-15 T 29-03-2018 AM474_RS15115 d8964095ae6b02053a7f96847fc5df8d 70 SUPERFAMILY SSF50182 19 69 6.0E-12 T 29-03-2018 IPR010920 LSM domain AM474_RS15115 d8964095ae6b02053a7f96847fc5df8d 70 Pfam PF06004 Bacterial protein of unknown function (DUF903) 22 68 4.9E-16 T 29-03-2018 IPR010305 Protein of unknown function DUF903 AM474_RS30145 2fb2703ab860aab514a9eb02f14f4e3d 101 Pfam PF11154 Protein of unknown function (DUF2934) 4 38 1.9E-14 T 29-03-2018 IPR021327 Protein of unknown function DUF2934 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 Gene3D G3DSA:1.20.1560.10 2 318 4.0E-28 T 29-03-2018 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 Gene3D G3DSA:3.40.50.300 321 550 4.3E-41 T 29-03-2018 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 SUPERFAMILY SSF90123 10 312 7.06E-33 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 6 548 7.7E-222 T 29-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 SMART SM00382 366 550 1.3E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 Pfam PF00005 ABC transporter 359 493 4.5E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 SUPERFAMILY SSF52540 336 547 6.2E-43 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31580 7e4683ae06573c6c46bc5cba5d81b23b 550 Pfam PF00664 ABC transporter transmembrane region 34 174 3.6E-9 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS12075 23533777027161f3cdf0c251e1fe748f 146 SUPERFAMILY SSF46626 39 143 2.6E-19 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12075 23533777027161f3cdf0c251e1fe748f 146 Gene3D G3DSA:1.10.760.10 29 146 4.0E-17 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS12075 23533777027161f3cdf0c251e1fe748f 146 Pfam PF00034 Cytochrome c 50 131 2.0E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS09730 28e6497e4e007ad60a501136f9fecae9 143 SUPERFAMILY SSF54637 2 139 1.25E-28 T 29-03-2018 IPR029069 HotDog domain AM474_RS09730 28e6497e4e007ad60a501136f9fecae9 143 Gene3D G3DSA:3.10.129.10 1 141 6.8E-27 T 29-03-2018 AM474_RS09730 28e6497e4e007ad60a501136f9fecae9 143 Pfam PF03061 Thioesterase superfamily 50 124 6.4E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS09730 28e6497e4e007ad60a501136f9fecae9 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 123 2.3E-18 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS21455 355481ea3fe3ccf5a40da2059fd4b286 244 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 4 146 3.0E-14 T 29-03-2018 AM474_RS21455 355481ea3fe3ccf5a40da2059fd4b286 244 Gene3D G3DSA:2.30.110.10 2 164 7.2E-38 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS21455 355481ea3fe3ccf5a40da2059fd4b286 244 SUPERFAMILY SSF50475 3 236 9.91E-57 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS21455 355481ea3fe3ccf5a40da2059fd4b286 244 Pfam PF10615 Protein of unknown function (DUF2470) 162 230 9.6E-14 T 29-03-2018 IPR019595 Domain of unknown function DUF2470 AM474_RS21455 355481ea3fe3ccf5a40da2059fd4b286 244 Gene3D G3DSA:3.20.180.10 165 240 2.0E-23 T 29-03-2018 IPR019595 Domain of unknown function DUF2470 AM474_RS26660 63a9a10c30ae3f4ff06d2bced0da08ed 86 Pfam PF05488 PAAR motif 7 76 3.2E-21 T 29-03-2018 IPR008727 PAAR motif AM474_RS13115 9cb9d2906fe5bf39ad806852b0976090 262 SUPERFAMILY SSF161098 6 260 1.83E-57 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13115 9cb9d2906fe5bf39ad806852b0976090 262 Gene3D G3DSA:1.10.3720.10 13 262 8.0E-42 T 29-03-2018 AM474_RS13115 9cb9d2906fe5bf39ad806852b0976090 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 259 2.9E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS11690 c70cccf9e28718aeeee1bd968c474fad 423 Pfam PF04285 Protein of unknown function (DUF444) 4 419 5.0E-180 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM474_RS11690 c70cccf9e28718aeeee1bd968c474fad 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 41.565 T 29-03-2018 IPR006698 Uncharacterised protein family UPF0229 AM474_RS11690 c70cccf9e28718aeeee1bd968c474fad 423 Gene3D G3DSA:3.40.50.410 225 363 0.0011 T 29-03-2018 IPR002035 von Willebrand factor, type A AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 Pfam PF00682 HMGL-like 2 259 7.5E-59 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 SUPERFAMILY SSF51182 400 442 6.77E-5 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 Gene3D G3DSA:3.20.20.70 1 326 5.1E-74 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 189 202 - T 29-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 SUPERFAMILY SSF51569 2 277 1.83E-67 T 29-03-2018 AM474_RS25065 68fec5928173e5d92ecff80497c605a9 455 Gene3D G3DSA:2.60.120.10 327 455 1.9E-4 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS13340 f32c298990118010e9c90480e2c0a2c0 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 2.5E-25 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13340 f32c298990118010e9c90480e2c0a2c0 272 SUPERFAMILY SSF161098 15 267 1.7E-56 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS13340 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 2.6E-128 T 29-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 AM474_RS13340 f32c298990118010e9c90480e2c0a2c0 272 Gene3D G3DSA:1.10.3720.10 11 271 6.7E-47 T 29-03-2018 AM474_RS13340 f32c298990118010e9c90480e2c0a2c0 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 268 2.1E-93 T 29-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 AM474_RS16285 67912fcf02836d2ba5f5000b6223496a 114 PIRSF PIRSF025560 2 114 1.3E-30 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM474_RS16285 67912fcf02836d2ba5f5000b6223496a 114 Pfam PF07027 Protein of unknown function (DUF1318) 28 114 2.1E-26 T 29-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 AM474_RS06900 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:1.10.10.10 11 107 1.3E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS06900 619bb603c8d275e187d32b7d42d3e8ab 357 Gene3D G3DSA:3.40.50.150 141 355 1.3E-31 T 29-03-2018 AM474_RS06900 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF53335 151 348 2.28E-35 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS06900 619bb603c8d275e187d32b7d42d3e8ab 357 Pfam PF13847 Methyltransferase domain 176 334 1.4E-21 T 29-03-2018 IPR025714 Methyltransferase domain AM474_RS06900 619bb603c8d275e187d32b7d42d3e8ab 357 SUPERFAMILY SSF46785 27 91 9.42E-7 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25010 03994d4a51cd85208d822064037f968c 157 SUPERFAMILY SSF55961 1 149 8.79E-43 T 29-03-2018 AM474_RS25010 03994d4a51cd85208d822064037f968c 157 Gene3D G3DSA:3.30.530.20 2 152 7.7E-35 T 29-03-2018 IPR023393 START-like domain AM474_RS25010 03994d4a51cd85208d822064037f968c 157 Pfam PF08982 Domain of unknown function (DUF1857) 16 147 1.6E-24 T 29-03-2018 IPR015075 Acetylaranotin biosynthesis cluster protein L AM474_RS23530 46326c351c619a126010270af0a06f6e 209 Pfam PF01230 HIT domain 75 165 6.7E-18 T 29-03-2018 IPR001310 Histidine triad (HIT) protein AM474_RS23530 46326c351c619a126010270af0a06f6e 209 Gene3D G3DSA:3.30.428.10 67 201 4.6E-23 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS23530 46326c351c619a126010270af0a06f6e 209 SUPERFAMILY SSF54197 68 199 3.57E-35 T 29-03-2018 IPR011146 HIT-like domain GO:0003824 AM474_RS08215 8e99a7775cc542fbe37167e948d191d5 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 114 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM474_RS08215 8e99a7775cc542fbe37167e948d191d5 182 Pfam PF14437 MafB19-like deaminase 30 173 3.1E-30 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM474_RS08215 8e99a7775cc542fbe37167e948d191d5 182 Gene3D G3DSA:3.40.140.10 23 182 4.3E-53 T 29-03-2018 AM474_RS08215 8e99a7775cc542fbe37167e948d191d5 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 32 173 46.038 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM474_RS08215 8e99a7775cc542fbe37167e948d191d5 182 SUPERFAMILY SSF53927 26 177 3.51E-55 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM474_RS22645 def5c9dc9c6f5db2764bc96fb0e1e327 216 Gene3D G3DSA:3.40.50.150 20 213 7.1E-25 T 29-03-2018 AM474_RS22645 def5c9dc9c6f5db2764bc96fb0e1e327 216 Pfam PF13489 Methyltransferase domain 41 195 9.7E-20 T 29-03-2018 AM474_RS22645 def5c9dc9c6f5db2764bc96fb0e1e327 216 SUPERFAMILY SSF53335 44 212 1.52E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10675 8a36ae1d8c0cfcb6621e3c3dbcf06814 340 Pfam PF01032 FecCD transport family 22 334 1.3E-83 T 29-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 AM474_RS10675 8a36ae1d8c0cfcb6621e3c3dbcf06814 340 Gene3D G3DSA:1.10.3470.10 6 340 7.7E-59 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS10675 8a36ae1d8c0cfcb6621e3c3dbcf06814 340 SUPERFAMILY SSF81345 5 334 9.29E-75 T 29-03-2018 IPR029022 ABC transporter, BtuC-like AM474_RS21445 5d5cfcc443a28b7d1171d67306f699ef 335 Gene3D G3DSA:2.30.30.100 23 71 1.2E-4 T 29-03-2018 AM474_RS21445 5d5cfcc443a28b7d1171d67306f699ef 335 Pfam PF04338 Protein of unknown function, DUF481 128 335 2.2E-47 T 29-03-2018 IPR007433 Protein of unknown function DUF481 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 179 260 1.8E-13 T 29-03-2018 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:3.40.190.10 84 178 2.0E-17 T 29-03-2018 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF03466 LysR substrate binding domain 87 274 1.9E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF46785 1 110 8.44E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 Gene3D G3DSA:1.10.10.10 1 83 2.9E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.1E-8 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.9E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00840 d6ba28f06de4da46cfcf983b701104a9 298 SUPERFAMILY SSF53850 87 273 3.44E-31 T 29-03-2018 AM474_RS00200 8ced086b32ae0353b811b246db916495 186 SUPERFAMILY SSF55729 10 179 1.29E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS00200 8ced086b32ae0353b811b246db916495 186 Pfam PF00583 Acetyltransferase (GNAT) family 35 149 1.1E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS00200 8ced086b32ae0353b811b246db916495 186 Gene3D G3DSA:3.40.630.30 2 186 3.0E-40 T 29-03-2018 AM474_RS23880 536e991b24dfdb64bc3a2e11390d4714 157 SUPERFAMILY SSF52833 3 154 4.56E-51 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS23880 536e991b24dfdb64bc3a2e11390d4714 157 PIRSF PIRSF000239 1 155 8.3E-29 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS23880 536e991b24dfdb64bc3a2e11390d4714 157 Gene3D G3DSA:3.40.30.10 1 156 2.2E-36 T 29-03-2018 AM474_RS23880 536e991b24dfdb64bc3a2e11390d4714 157 Pfam PF00578 AhpC/TSA family 5 133 3.5E-36 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 12 93 2.0E-41 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 Gene3D G3DSA:3.30.110.60 2 97 6.3E-23 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 SUPERFAMILY SSF75471 1 96 9.55E-28 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.7E-18 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 2.4E-23 T 29-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 AM474_RS19470 e6b8616b2d5c6e134a441db2369a2381 104 SMART SM01103 3 86 1.6E-38 T 29-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 AM474_RS18370 b558b158d4d0f89ef6d1e051a27acd0d 512 Gene3D G3DSA:3.30.70.1230 310 455 8.3E-5 T 29-03-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 AM474_RS18370 b558b158d4d0f89ef6d1e051a27acd0d 512 Pfam PF10144 Bacterial virulence factor haemolysin 30 158 5.6E-8 T 29-03-2018 IPR019305 Uncharacterised protein family Smp AM474_RS18660 8266d0aae5276da0b62d9fb79ba87c74 310 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 48 309 5.3E-62 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM474_RS18660 8266d0aae5276da0b62d9fb79ba87c74 310 Gene3D G3DSA:3.30.1780.10 2 134 1.3E-38 T 29-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 AM474_RS18660 8266d0aae5276da0b62d9fb79ba87c74 310 SUPERFAMILY SSF51735 2 309 2.73E-88 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS18660 8266d0aae5276da0b62d9fb79ba87c74 310 Gene3D G3DSA:3.40.50.720 135 293 9.6E-33 T 29-03-2018 AM474_RS18660 8266d0aae5276da0b62d9fb79ba87c74 310 PIRSF PIRSF001439 3 310 3.3E-73 T 29-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 SUPERFAMILY SSF46785 6 86 2.31E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 Pfam PF00155 Aminotransferase class I and II 107 446 4.0E-38 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 Gene3D G3DSA:3.90.1150.10 370 457 1.3E-13 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 SMART SM00345 17 76 1.3E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 Gene3D G3DSA:1.10.10.10 2 78 1.4E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 Gene3D G3DSA:3.40.640.10 122 369 2.4E-47 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.7E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS16400 5a5ca308e7bfa15e7037d564e0a73113 458 SUPERFAMILY SSF53383 104 457 4.54E-86 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS30380 fe8104b1b91f52d2e898ef1c5d64436a 319 SUPERFAMILY SSF51556 8 300 3.15E-46 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS30380 fe8104b1b91f52d2e898ef1c5d64436a 319 Gene3D G3DSA:3.20.20.140 1 311 1.4E-33 T 29-03-2018 AM474_RS30380 fe8104b1b91f52d2e898ef1c5d64436a 319 Pfam PF04909 Amidohydrolase 10 300 6.1E-39 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 243 2.3E-41 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 Gene3D G3DSA:3.90.25.10 168 332 1.7E-25 T 29-03-2018 AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 5 330 5.8E-131 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 SUPERFAMILY SSF51735 3 328 4.29E-56 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 Gene3D G3DSA:3.40.50.720 2 167 1.5E-15 T 29-03-2018 AM474_RS06020 f724a6cc5a99f7cac0c5528b6412a014 332 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 4 331 48.013 T 29-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 Gene3D G3DSA:1.10.760.10 4 96 3.6E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 84 95 1.5E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 41 51 1.5E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 30 41 1.5E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 PRINTS PR00607 Class IE cytochrome C signature 69 81 1.5E-8 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 19 94 1.4E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15290 4a1b744abf8d94a3c517682460a10160 97 SUPERFAMILY SSF46626 20 95 1.0E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Pfam PF02119 Flagellar P-ring protein 24 368 4.0E-146 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 24 39 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 59 74 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 39 54 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 192 210 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 166 184 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 256 268 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 8.1E-90 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24295 cbce50df8ac4bf39b0cd4b546dcbc6af 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 369 42.04 T 29-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 AM474_RS24655 d4681c4cf177a2504363e957992305d0 393 SUPERFAMILY SSF56796 5 390 2.36E-103 T 29-03-2018 AM474_RS24655 d4681c4cf177a2504363e957992305d0 393 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 379 2.2E-108 T 29-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AM474_RS24655 d4681c4cf177a2504363e957992305d0 393 Gene3D G3DSA:1.20.1090.10 196 393 1.3E-49 T 29-03-2018 AM474_RS24655 d4681c4cf177a2504363e957992305d0 393 Gene3D G3DSA:3.40.50.1970 3 195 4.1E-38 T 29-03-2018 AM474_RS24655 d4681c4cf177a2504363e957992305d0 393 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 184 212 - T 29-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AM474_RS11485 ae92b610db82d039b1fc54c5d912adb0 329 SUPERFAMILY SSF69279 4 173 4.02E-27 T 29-03-2018 AM474_RS11485 ae92b610db82d039b1fc54c5d912adb0 329 Gene3D G3DSA:3.55.50.10 102 182 8.6E-4 T 29-03-2018 AM474_RS11485 ae92b610db82d039b1fc54c5d912adb0 329 Pfam PF05954 Phage late control gene D protein (GPD) 38 312 4.6E-22 T 29-03-2018 AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 PIRSF PIRSF006278 2 229 7.8E-8 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 PIRSF PIRSF006278 256 308 38.0 T 29-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 304 3.2E-64 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 56 - T 29-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 SUPERFAMILY SSF53686 7 312 5.89E-74 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 Gene3D G3DSA:3.40.50.1100 138 318 6.1E-29 T 29-03-2018 AM474_RS22920 af086e6d5bd2864a7539175f7a14b7ca 320 Gene3D G3DSA:3.40.50.1100 29 137 4.8E-29 T 29-03-2018 AM474_RS06145 07c11bbfd31944e916a9aae7a636e574 115 Pfam PF07472 Fucose-binding lectin II (PA-IIL) 7 114 3.7E-46 T 29-03-2018 IPR010907 Calcium-mediated lectin AM474_RS06145 07c11bbfd31944e916a9aae7a636e574 115 Gene3D G3DSA:2.60.120.400 5 112 5.6E-37 T 29-03-2018 AM474_RS06145 07c11bbfd31944e916a9aae7a636e574 115 SUPERFAMILY SSF82026 3 115 1.19E-46 T 29-03-2018 IPR010907 Calcium-mediated lectin AM474_RS06145 07c11bbfd31944e916a9aae7a636e574 115 PIRSF PIRSF029595 1 115 8.0E-65 T 29-03-2018 IPR016927 Lectin, sugar-binding AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 182 206 8.0E-7 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 8.0E-7 T 29-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 SUPERFAMILY SSF51905 13 396 5.72E-50 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 Pfam PF00743 Flavin-binding monooxygenase-like 85 353 1.2E-12 T 29-03-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 Gene3D G3DSA:3.50.50.60 12 175 1.9E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 Pfam PF13450 NAD(P)-binding Rossmann-like domain 16 73 1.9E-7 T 29-03-2018 AM474_RS30505 e0d5ea453407a70f37bb810588e92fb9 508 Gene3D G3DSA:3.50.50.60 176 436 7.4E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 Gene3D G3DSA:3.40.309.10 284 477 2.3E-75 T 29-03-2018 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 Gene3D G3DSA:3.40.605.10 10 283 3.4E-101 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 Pfam PF00171 Aldehyde dehydrogenase family 32 491 4.6E-174 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS10240 a0ce69737caf7e9ca48201ea243627ba 495 SUPERFAMILY SSF53720 14 493 2.49E-170 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS02580 663569d7963fd3a21f8a9fe257a1d90c 91 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 7 83 2.0E-6 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS02580 663569d7963fd3a21f8a9fe257a1d90c 91 Pfam PF11112 Pyocin activator protein PrtN 3 77 5.8E-31 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 Gene3D G3DSA:2.40.50.100 56 112 2.1E-16 T 29-03-2018 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 351 4.9E-74 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 263 4.5E-17 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 SUPERFAMILY SSF111369 47 274 7.19E-24 T 29-03-2018 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 Gene3D G3DSA:2.40.50.100 165 339 2.8E-8 T 29-03-2018 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 Gene3D G3DSA:1.10.287.470 150 164 0.26 T 29-03-2018 AM474_RS13985 9a57a2cb0e45179b30bdf22f5db97293 356 Gene3D G3DSA:1.10.287.470 113 149 4.3E-8 T 29-03-2018 AM474_RS22760 a911027a5234638918c2f39d81199e4c 107 Pfam PF13744 Helix-turn-helix domain 12 86 5.2E-13 T 29-03-2018 AM474_RS22760 a911027a5234638918c2f39d81199e4c 107 Gene3D G3DSA:3.30.240.10 27 105 5.5E-10 T 29-03-2018 AM474_RS22760 a911027a5234638918c2f39d81199e4c 107 SUPERFAMILY SSF47413 31 95 2.73E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 SUPERFAMILY SSF109755 13 234 9.31E-73 T 29-03-2018 AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 Gene3D G3DSA:1.20.58.220 7 122 2.0E-29 T 29-03-2018 AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 PIRSF PIRSF003107 8 229 8.4E-81 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 Gene3D G3DSA:1.20.58.220 127 241 4.7E-30 T 29-03-2018 AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 Pfam PF01895 PhoU domain 27 113 3.4E-22 T 29-03-2018 IPR026022 PhoU domain AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 Pfam PF01895 PhoU domain 131 214 1.7E-18 T 29-03-2018 IPR026022 PhoU domain AM474_RS15980 d2528b7e815ce705f5156b1b22207391 242 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 224 5.1E-80 T 29-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 Gene3D G3DSA:1.10.4100.10 237 444 3.8E-34 T 29-03-2018 AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 454 3.7E-210 T 29-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03315 Serine dehydratase beta chain 4 154 9.2E-55 T 29-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 Pfam PF03313 Serine dehydratase alpha chain 186 452 2.1E-103 T 29-03-2018 IPR005130 Serine dehydratase-like, alpha subunit AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 Gene3D G3DSA:3.30.1330.90 11 158 3.4E-53 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM474_RS15880 5e0eb206c11c55b7000149bf29b48664 458 SUPERFAMILY SSF143548 17 154 6.8E-45 T 29-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 SUPERFAMILY SSF48008 91 214 2.62E-29 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 72 4.7E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 Gene3D G3DSA:1.10.10.10 5 74 6.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 Gene3D G3DSA:1.20.120.530 86 214 1.5E-30 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 SUPERFAMILY SSF46785 7 76 2.27E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 SMART SM00895 92 215 4.4E-20 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 SMART SM00345 13 72 7.8E-18 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 Pfam PF07729 FCD domain 94 213 7.7E-29 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.6E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS27310 e32a48e8623457c7f33db7446bbe36f9 215 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.6E-8 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS05380 0c209cecf5f827140a6c6beb5650eb24 279 Pfam PF13460 NAD(P)H-binding 9 175 1.2E-12 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS05380 0c209cecf5f827140a6c6beb5650eb24 279 Gene3D G3DSA:3.90.25.10 136 276 7.9E-10 T 29-03-2018 AM474_RS05380 0c209cecf5f827140a6c6beb5650eb24 279 Gene3D G3DSA:3.40.50.720 1 135 2.9E-13 T 29-03-2018 AM474_RS05380 0c209cecf5f827140a6c6beb5650eb24 279 SUPERFAMILY SSF51735 3 264 3.38E-44 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23895 6a1a6553f05a7de6fbefbe7e53c5fc1b 396 Pfam PF06804 NlpB/DapX lipoprotein 36 374 4.5E-22 T 29-03-2018 IPR010653 NlpB/DapX lipoprotein AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 Pfam PF01565 FAD binding domain 56 194 5.5E-36 T 29-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:1.10.45.10 432 470 1.0E-12 T 29-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 SUPERFAMILY SSF55103 204 473 4.41E-78 T 29-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 2.1E-172 T 29-03-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:3.30.43.10 8 107 2.0E-18 T 29-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 470 2.0E-73 T 29-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 Gene3D G3DSA:3.30.465.10 108 252 3.6E-38 T 29-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AM474_RS16030 c3aefcc8041aa8926c318fcd04edf345 499 SUPERFAMILY SSF56176 19 231 7.01E-65 T 29-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 3.7E-111 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 SMART SM01230 114 370 2.5E-112 T 29-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 Gene3D G3DSA:3.30.590.10 114 451 4.0E-92 T 29-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 29-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF55931 114 449 2.35E-106 T 29-03-2018 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 Gene3D G3DSA:3.10.20.70 1 113 5.6E-19 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS13255 d192a601871560b9c600f63d0efd335d 452 SUPERFAMILY SSF54368 6 113 2.62E-17 T 29-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM474_RS21505 11f0a0eeeff2d6662967efbb317f4dcc 227 SUPERFAMILY SSF53335 11 224 1.31E-27 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS21505 11f0a0eeeff2d6662967efbb317f4dcc 227 Gene3D G3DSA:3.40.50.150 8 221 2.5E-22 T 29-03-2018 AM474_RS21505 11f0a0eeeff2d6662967efbb317f4dcc 227 Pfam PF13649 Methyltransferase domain 56 151 2.3E-13 T 29-03-2018 AM474_RS20050 f1e20c39740c6e60e0f143f3e67cf05e 790 Pfam PF00577 Outer membrane usher protein 266 691 1.9E-22 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM474_RS20050 f1e20c39740c6e60e0f143f3e67cf05e 790 Pfam PF13953 PapC C-terminal domain 707 768 4.5E-15 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM474_RS20050 f1e20c39740c6e60e0f143f3e67cf05e 790 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 282 292 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM474_RS08245 6105a30c04e9ed4eeeacf621770dcbd1 461 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 6.5E-51 T 29-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM474_RS08245 6105a30c04e9ed4eeeacf621770dcbd1 461 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 1 305 4.0E-64 T 29-03-2018 IPR014150 Conjugal transfer, TrbL AM474_RS26750 07fe6dbe743805e999cffbafc89212da 377 Pfam PF00487 Fatty acid desaturase 115 329 1.2E-26 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS07885 ad8c9ef567bd7e7928137d91bee72126 229 Gene3D G3DSA:2.40.50.180 99 169 1.7E-10 T 29-03-2018 AM474_RS07885 ad8c9ef567bd7e7928137d91bee72126 229 Gene3D G3DSA:2.30.30.40 170 215 2.9E-5 T 29-03-2018 AM474_RS07885 ad8c9ef567bd7e7928137d91bee72126 229 Pfam PF01584 CheW-like domain 83 223 1.8E-21 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07885 ad8c9ef567bd7e7928137d91bee72126 229 SMART SM00260 78 221 3.3E-5 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS07885 ad8c9ef567bd7e7928137d91bee72126 229 SUPERFAMILY SSF50341 80 224 1.16E-21 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS02640 a32f8f98ff7d1f7198a5e53e482826ad 87 Pfam PF14357 Domain of unknown function (DUF4404) 7 87 4.0E-27 T 29-03-2018 IPR025516 Protein of unknown function DUF4404 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 187 207 2.5E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 2.5E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.5E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 2.5E-21 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Pfam PF00672 HAMP domain 212 258 1.8E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Gene3D G3DSA:1.20.120.30 23 185 5.3E-11 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 184 2.1E-9 T 29-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 SMART SM00304 211 264 4.0E-6 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 SMART SM00283 279 540 5.3E-70 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Gene3D G3DSA:1.10.287.950 502 540 0.21 T 29-03-2018 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Gene3D G3DSA:1.10.287.950 293 501 2.2E-48 T 29-03-2018 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 505 5.8E-41 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS18625 a5286f6571faa23da57901fb03f92f66 541 SUPERFAMILY SSF58104 232 541 9.55E-71 T 29-03-2018 AM474_RS21105 d3532d0b384f66ccea2e6536da21d9bb 269 Pfam PF00005 ABC transporter 25 172 1.2E-30 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS21105 d3532d0b384f66ccea2e6536da21d9bb 269 Gene3D G3DSA:3.40.50.300 6 268 1.0E-62 T 29-03-2018 AM474_RS21105 d3532d0b384f66ccea2e6536da21d9bb 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS21105 d3532d0b384f66ccea2e6536da21d9bb 269 SMART SM00382 33 222 2.1E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS21105 d3532d0b384f66ccea2e6536da21d9bb 269 SUPERFAMILY SSF52540 8 234 1.74E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.9E-29 T 29-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 Pfam PF01313 Bacterial export proteins, family 3 6 78 3.5E-29 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.9E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.9E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.9E-17 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS26355 fc545aa330fc1afe2e79346775eb5e5e 89 PIRSF PIRSF004669 1 89 2.2E-30 T 29-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 AM474_RS18250 de8cabed1d16ebf77196b3af6525fab6 215 Gene3D G3DSA:1.10.357.10 1 215 3.0E-42 T 29-03-2018 AM474_RS18250 de8cabed1d16ebf77196b3af6525fab6 215 SUPERFAMILY SSF46689 8 85 1.35E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS18250 de8cabed1d16ebf77196b3af6525fab6 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 7.5E-13 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS18250 de8cabed1d16ebf77196b3af6525fab6 215 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 89 200 5.2E-26 T 29-03-2018 AM474_RS18250 de8cabed1d16ebf77196b3af6525fab6 215 SUPERFAMILY SSF48498 86 200 1.33E-18 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 338 7.1E-165 T 29-03-2018 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109 AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.0E-132 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 SUPERFAMILY SSF55729 1 337 1.85E-120 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:2.40.40.20 274 338 9.0E-24 T 29-03-2018 AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 8.0E-127 T 29-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AM474_RS23160 02e0b09d7dc26721f386b9129f22df9b 338 Gene3D G3DSA:3.40.630.30 1 265 2.4E-10 T 29-03-2018 AM474_RS28440 b26cb2695f6933aad2eeff7a3978ca8a 341 Pfam PF01343 Peptidase family S49 152 300 3.2E-44 T 29-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM474_RS28440 b26cb2695f6933aad2eeff7a3978ca8a 341 Gene3D G3DSA:3.90.226.10 43 298 9.6E-30 T 29-03-2018 AM474_RS28440 b26cb2695f6933aad2eeff7a3978ca8a 341 SUPERFAMILY SSF52096 88 199 1.01E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS28440 b26cb2695f6933aad2eeff7a3978ca8a 341 SUPERFAMILY SSF52096 230 289 1.01E-27 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS28440 b26cb2695f6933aad2eeff7a3978ca8a 341 Pfam PF08496 Peptidase family S49 N-terminal 2 148 1.1E-53 T 29-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 AM474_RS04610 329b012421039b09133f334ed40407fd 793 SUPERFAMILY SSF82866 579 779 5.49E-36 T 29-03-2018 AM474_RS04610 329b012421039b09133f334ed40407fd 793 Pfam PF02460 Patched family 178 308 9.9E-5 T 29-03-2018 IPR003392 Protein patched/dispatched GO:0016021 AM474_RS04610 329b012421039b09133f334ed40407fd 793 Gene3D G3DSA:1.20.1640.10 573 790 2.4E-33 T 29-03-2018 AM474_RS04610 329b012421039b09133f334ed40407fd 793 Gene3D G3DSA:1.20.1640.10 194 408 1.1E-26 T 29-03-2018 AM474_RS04610 329b012421039b09133f334ed40407fd 793 Pfam PF03176 MMPL family 479 777 2.5E-27 T 29-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 AM474_RS04610 329b012421039b09133f334ed40407fd 793 SUPERFAMILY SSF82866 207 395 2.88E-25 T 29-03-2018 AM474_RS27880 b468b2c1fcbc35611fa137ba02087c79 317 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 3.1E-93 T 29-03-2018 IPR007296 Domain of unknown function DUF403 AM474_RS00180 8350d29944f69867f0d78ed31b138d9d 382 Pfam PF00487 Fatty acid desaturase 114 329 4.9E-28 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS26735 c81bf8b7bc42537ab45413b19d42887d 279 Pfam PF13478 XdhC Rossmann domain 106 247 1.4E-37 T 29-03-2018 IPR027051 XdhC Rossmann domain AM474_RS26735 c81bf8b7bc42537ab45413b19d42887d 279 SUPERFAMILY SSF51735 97 188 1.55E-12 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS26735 c81bf8b7bc42537ab45413b19d42887d 279 Pfam PF02625 XdhC and CoxI family 11 71 3.0E-18 T 29-03-2018 IPR003777 XdhC- CoxI AM474_RS26735 c81bf8b7bc42537ab45413b19d42887d 279 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 18 248 1.7E-99 T 29-03-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC AM474_RS26735 c81bf8b7bc42537ab45413b19d42887d 279 Gene3D G3DSA:3.40.50.720 96 275 3.1E-7 T 29-03-2018 AM474_RS03255 772eda5b602a28183b763c30fc7f6148 217 SUPERFAMILY SSF53850 10 192 1.54E-25 T 29-03-2018 AM474_RS03255 772eda5b602a28183b763c30fc7f6148 217 Gene3D G3DSA:3.40.190.10 8 93 1.5E-15 T 29-03-2018 AM474_RS03255 772eda5b602a28183b763c30fc7f6148 217 Pfam PF03466 LysR substrate binding domain 10 192 3.4E-23 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03255 772eda5b602a28183b763c30fc7f6148 217 Gene3D G3DSA:3.40.190.10 94 178 1.1E-10 T 29-03-2018 AM474_RS20395 900b60d74a39b872e6cbc7fd779159ca 463 SUPERFAMILY SSF56935 21 463 1.54E-83 T 29-03-2018 AM474_RS20395 900b60d74a39b872e6cbc7fd779159ca 463 Gene3D G3DSA:2.40.160.60 21 463 1.3E-85 T 29-03-2018 AM474_RS20395 900b60d74a39b872e6cbc7fd779159ca 463 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 463 2.0E-159 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 218 9.0E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 2.3E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 2.3E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 2.3E-8 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 Gene3D G3DSA:1.10.10.10 160 221 7.9E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 SMART SM00421 163 220 4.7E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 SUPERFAMILY SSF46894 149 219 2.24E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS10245 cbd073902cc6387e98e9481435c77f2f 222 Gene3D G3DSA:3.30.450.80 6 159 8.3E-14 T 29-03-2018 AM474_RS18640 7e8e5737842ac8c27fbc7562a683bb8b 304 Gene3D G3DSA:1.10.3470.10 1 293 1.9E-51 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS18640 7e8e5737842ac8c27fbc7562a683bb8b 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 2.5E-50 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS19700 e22e05cd17c10da2472eed67256435dd 170 Pfam PF13590 Domain of unknown function (DUF4136) 37 165 6.3E-11 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:3.40.50.980 18 189 9.9E-37 T 29-03-2018 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:3.40.50.980 190 340 1.7E-35 T 29-03-2018 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:2.30.38.10 363 437 1.3E-20 T 29-03-2018 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 SUPERFAMILY SSF56801 13 538 2.09E-142 T 29-03-2018 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Gene3D G3DSA:3.30.300.30 438 540 5.7E-28 T 29-03-2018 AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 4.8E-21 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS10840 37c848d53aa46a110cb1f9d4f942b7e8 540 Pfam PF00501 AMP-binding enzyme 25 443 1.9E-94 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS22250 027b952dca25ec146a563bf0696276e5 131 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 1.7E-54 T 29-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS22250 027b952dca25ec146a563bf0696276e5 131 SUPERFAMILY SSF54593 1 126 5.91E-34 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS22250 027b952dca25ec146a563bf0696276e5 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 1.3E-19 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS22250 027b952dca25ec146a563bf0696276e5 131 Gene3D G3DSA:3.10.180.10 1 131 4.8E-35 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS11770 d17f03510425ebc8e553bddbba4edbf6 625 Pfam PF09823 Domain of unknown function (DUF2357) 94 294 1.1E-5 T 29-03-2018 IPR018633 Domain of unknown function DUF2357 AM474_RS11770 d17f03510425ebc8e553bddbba4edbf6 625 Pfam PF04411 PD-(D/E)XK nuclease superfamily 399 516 6.3E-8 T 29-03-2018 IPR007505 PD-(D/E)XK nuclease superfamily 7 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 SUPERFAMILY SSF56601 319 341 4.7E-119 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 SUPERFAMILY SSF56601 370 756 4.7E-119 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Gene3D G3DSA:3.30.2060.10 70 156 1.1E-24 T 29-03-2018 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 431 659 8.2E-18 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Gene3D G3DSA:1.10.3810.10 169 362 6.7E-66 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 26 752 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 PIRSF PIRSF002799 1 774 0.0 T 29-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Pfam PF00912 Transglycosylase 166 336 5.7E-57 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 SUPERFAMILY SSF53955 163 360 3.94E-66 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Pfam PF14814 Bifunctional transglycosylase second domain 71 154 6.1E-24 T 29-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Gene3D G3DSA:3.40.710.10 363 751 3.4E-103 T 29-03-2018 AM474_RS19760 9638a5726d907844a45c0953a40cbda7 774 Gene3D G3DSA:1.20.5.100 5 53 8.5E-14 T 29-03-2018 AM474_RS12295 5c19085198b925bdaff593a60d4ab21e 158 Pfam PF00583 Acetyltransferase (GNAT) family 41 136 3.2E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS12295 5c19085198b925bdaff593a60d4ab21e 158 Gene3D G3DSA:3.40.630.30 1 158 3.2E-36 T 29-03-2018 AM474_RS12295 5c19085198b925bdaff593a60d4ab21e 158 SUPERFAMILY SSF55729 3 152 5.57E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS08015 9a70588be9e3429d04ccc8819e70d533 231 Gene3D G3DSA:1.20.5.50 24 129 3.3E-5 T 29-03-2018 AM474_RS08015 9a70588be9e3429d04ccc8819e70d533 231 Gene3D G3DSA:1.20.5.320 130 197 0.0036 T 29-03-2018 AM474_RS08015 9a70588be9e3429d04ccc8819e70d533 231 Pfam PF04012 PspA/IM30 family 2 228 6.9E-66 T 29-03-2018 IPR007157 PspA/IM30 AM474_RS08590 b164450ef38fb41fdd6a9a359fcdefe7 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 321 1.8E-80 T 29-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 SUPERFAMILY SSF49354 25 149 2.24E-39 T 29-03-2018 IPR008962 PapD-like AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 150 5.1E-41 T 29-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 SUPERFAMILY SSF49584 151 241 1.03E-17 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 177 240 1.4E-21 T 29-03-2018 IPR016148 Pili assembly chaperone, C-terminal AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 Gene3D G3DSA:2.60.40.10 29 150 5.5E-37 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 106 123 - T 29-03-2018 IPR018046 Pili assembly chaperone, conserved site AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 Gene3D G3DSA:2.60.40.10 151 248 3.1E-29 T 29-03-2018 IPR013783 Immunoglobulin-like fold AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 30 39 3.2E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 79 100 3.2E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 172 187 3.2E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 131 146 3.2E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS10300 5ce75f200debf08af5e5aab791095814 248 PRINTS PR00969 Pili chaperone signature 107 124 3.2E-29 T 29-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 AM474_RS09715 e5eb54601bb1045d01288d5e258031ad 361 SUPERFAMILY SSF56281 85 306 9.34E-32 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS09715 e5eb54601bb1045d01288d5e258031ad 361 Pfam PF12706 Beta-lactamase superfamily domain 102 300 3.0E-42 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS09715 e5eb54601bb1045d01288d5e258031ad 361 Gene3D G3DSA:3.60.15.10 44 356 5.8E-55 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS09715 e5eb54601bb1045d01288d5e258031ad 361 PIRSF PIRSF038896 24 343 2.5E-99 T 29-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 Pfam PF00448 SRP54-type protein, GTPase domain 211 399 4.8E-40 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 SMART SM00382 208 379 4.4E-6 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 SUPERFAMILY SSF52540 207 398 2.64E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 Gene3D G3DSA:3.40.50.300 206 402 6.3E-16 T 29-03-2018 AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 SMART SM00962 209 401 2.9E-46 T 29-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM474_RS26385 9f69a74f8b87ac186ef02dd412b49134 429 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 297 5.1E-77 T 29-03-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 AM474_RS30340 c3682a95e0e1614618b3b3c3e208050c 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 80 9.9E-20 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS30340 c3682a95e0e1614618b3b3c3e208050c 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 229 3.0E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS30340 c3682a95e0e1614618b3b3c3e208050c 238 SUPERFAMILY SSF161098 13 217 5.23E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS30340 c3682a95e0e1614618b3b3c3e208050c 238 Gene3D G3DSA:1.10.3720.10 7 232 2.0E-41 T 29-03-2018 AM474_RS23285 20808a66569c4ead9e0824878ba656e8 634 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 15 634 34.264 T 29-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup AM474_RS23285 20808a66569c4ead9e0824878ba656e8 634 Pfam PF02705 K+ potassium transporter 24 556 1.1E-205 T 29-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 SUPERFAMILY SSF48179 415 498 1.62E-20 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 6.3E-32 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 415 498 1.9E-21 T 29-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Gene3D G3DSA:3.40.50.720 6 187 3.7E-47 T 29-03-2018 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 SUPERFAMILY SSF48179 188 294 2.38E-33 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Gene3D G3DSA:1.10.1040.10 412 503 3.0E-18 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Gene3D G3DSA:1.10.1040.10 188 291 1.7E-32 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 SUPERFAMILY SSF51735 9 188 2.33E-48 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS07300 f3e6ec5b52cb7fc06918f276997d2d74 510 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 186 4.7E-58 T 29-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 AM474_RS22515 520abb0d10010bd8c089737ab673336b 322 Pfam PF08003 Protein of unknown function (DUF1698) 12 321 3.3E-137 T 29-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like AM474_RS22515 520abb0d10010bd8c089737ab673336b 322 Gene3D G3DSA:3.40.50.150 21 322 1.1E-24 T 29-03-2018 AM474_RS22515 520abb0d10010bd8c089737ab673336b 322 SUPERFAMILY SSF53335 91 322 9.07E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS22515 520abb0d10010bd8c089737ab673336b 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 320 1.4E-137 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM474_RS22515 520abb0d10010bd8c089737ab673336b 322 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 15 321 53.019 T 29-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 AM474_RS07215 fa0d7c7ed66ae7083de53031413b67c5 176 Gene3D G3DSA:1.20.950.20 1 175 5.1E-30 T 29-03-2018 AM474_RS07215 fa0d7c7ed66ae7083de53031413b67c5 176 SUPERFAMILY SSF81342 2 172 8.63E-29 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS07215 fa0d7c7ed66ae7083de53031413b67c5 176 Pfam PF01292 Prokaryotic cytochrome b561 5 172 6.1E-27 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS30075 df3137c89d560647e66295e3b24b5179 163 Pfam PF02308 MgtC family 31 154 5.4E-35 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS30075 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 109 133 2.9E-37 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS30075 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 34 53 2.9E-37 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS30075 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 53 71 2.9E-37 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS30075 df3137c89d560647e66295e3b24b5179 163 PRINTS PR01837 MgtC/SapB protein signature 80 102 2.9E-37 T 29-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AM474_RS06725 5d02ae13b1aa1f8cb4dbdc4f17eb2cd3 441 Gene3D G3DSA:1.10.575.10 15 415 1.9E-28 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AM474_RS06725 5d02ae13b1aa1f8cb4dbdc4f17eb2cd3 441 SUPERFAMILY SSF48537 147 366 1.06E-38 T 29-03-2018 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:2.40.50.140 5 59 0.3 T 29-03-2018 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:1.10.10.10 219 277 5.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:2.40.50.140 143 217 7.4E-5 T 29-03-2018 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 146 208 0.87 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 SMART SM00316 71 133 6.9 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 4 66 2.3E-22 T 29-03-2018 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Pfam PF13509 S1 domain 73 131 3.6E-9 T 29-03-2018 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 Gene3D G3DSA:2.40.50.140 60 138 1.5E-9 T 29-03-2018 AM474_RS24500 e9e55b841622e6f87f6522b8b3ba58ed 279 PIRSF PIRSF012524 1 279 6.5E-104 T 29-03-2018 IPR014464 Conserved virulence factor B AM474_RS21610 5a26a56179be21107ea821788695ead6 75 Pfam PF04023 FeoA domain 2 65 2.7E-11 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM474_RS21610 5a26a56179be21107ea821788695ead6 75 SUPERFAMILY SSF50037 3 71 2.98E-17 T 29-03-2018 IPR008988 Transcriptional repressor, C-terminal AM474_RS21610 5a26a56179be21107ea821788695ead6 75 SMART SM00899 1 73 5.1E-12 T 29-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AM474_RS21610 5a26a56179be21107ea821788695ead6 75 Gene3D G3DSA:2.30.30.90 2 75 2.1E-15 T 29-03-2018 AM474_RS27520 0c1438824d60402e98e1c04c33455448 335 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 4.4E-97 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS27520 0c1438824d60402e98e1c04c33455448 335 Pfam PF06996 Type VI secretion, TssG 20 320 2.7E-88 T 29-03-2018 IPR010732 Type VI secretion, TssG-like AM474_RS15095 19b38c4be68cf136ce07d29896945b28 585 Pfam PF00999 Sodium/hydrogen exchanger family 12 376 9.1E-64 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS15095 19b38c4be68cf136ce07d29896945b28 585 Gene3D G3DSA:1.20.91.10 237 312 5.9E-7 T 29-03-2018 AM474_RS14375 1505677bb7b9248868b4ab143d1a7cfb 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 493 3.3E-219 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS14375 1505677bb7b9248868b4ab143d1a7cfb 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 493 1.1E-190 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS13135 173686fcf46a5bf3d878bcbd26f52b56 116 Gene3D G3DSA:2.40.50.200 15 116 7.8E-26 T 29-03-2018 AM474_RS13135 173686fcf46a5bf3d878bcbd26f52b56 116 Pfam PF04076 Bacterial OB fold (BOF) protein 19 113 2.2E-35 T 29-03-2018 IPR005220 Bacterial OB-fold AM474_RS13135 173686fcf46a5bf3d878bcbd26f52b56 116 SUPERFAMILY SSF101756 12 114 1.57E-29 T 29-03-2018 IPR005220 Bacterial OB-fold AM474_RS06275 9fffa0932b594799927d37a542e017aa 152 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 11 151 3.9E-54 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06275 9fffa0932b594799927d37a542e017aa 152 Pfam PF06754 Phosphonate metabolism protein PhnG 12 150 1.1E-55 T 29-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 Gene3D G3DSA:2.170.130.10 68 187 1.2E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 Gene3D G3DSA:2.40.170.20 188 718 1.8E-72 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 718 1.9E-90 T 29-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 174 2.5E-20 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 29-03-2018 IPR010917 TonB-dependent receptor, conserved site AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 Pfam PF00593 TonB dependent receptor 246 716 1.7E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS03740 4597a9c1ad4c125d6192af88843f5586 718 SUPERFAMILY SSF56935 49 718 8.93E-128 T 29-03-2018 AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 44 332 6.5E-119 T 29-03-2018 IPR011757 Lytic transglycosylase MltB AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 Gene3D G3DSA:1.10.530.10 214 339 1.3E-31 T 29-03-2018 AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 SUPERFAMILY SSF53955 30 334 4.87E-96 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 Gene3D G3DSA:1.10.8.350 104 208 2.5E-38 T 29-03-2018 AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 Gene3D G3DSA:1.10.8.350 34 103 5.3E-7 T 29-03-2018 AM474_RS09875 f5864cc85b9dafc0de50e84f2d15c8ac 340 Pfam PF13406 Transglycosylase SLT domain 40 330 1.5E-101 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AM474_RS23410 94b9197786cebf118b44e0c7724f6dfd 108 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 6 90 4.3E-27 T 29-03-2018 IPR009778 Modulator of Rho-dependent transcription termination AM474_RS23410 94b9197786cebf118b44e0c7724f6dfd 108 SUPERFAMILY SSF101744 1 90 3.71E-20 T 29-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 AM474_RS23410 94b9197786cebf118b44e0c7724f6dfd 108 Gene3D G3DSA:2.30.30.400 7 90 6.5E-23 T 29-03-2018 AM474_RS22430 b960e766486e4f6d00af3d5f5ce7b112 278 SUPERFAMILY SSF109604 9 252 1.67E-60 T 29-03-2018 AM474_RS22430 b960e766486e4f6d00af3d5f5ce7b112 278 Gene3D G3DSA:1.10.3210.10 1 276 1.1E-45 T 29-03-2018 AM474_RS22430 b960e766486e4f6d00af3d5f5ce7b112 278 Pfam PF08668 HDOD domain 23 207 2.9E-47 T 29-03-2018 IPR013976 Metal-dependent hydrolase HDOD AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 PIRSF PIRSF036979 16 311 2.5E-27 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 311 4.7E-129 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 SUPERFAMILY SSF52768 9 310 5.22E-82 T 29-03-2018 AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 Gene3D G3DSA:3.40.800.10 1 311 1.5E-84 T 29-03-2018 AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 Pfam PF00491 Arginase family 40 309 2.1E-61 T 29-03-2018 IPR006035 Ureohydrolase GO:0046872 AM474_RS05105 8a4c33092bad6d058ba31f594273e215 311 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 311 43.993 T 29-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 SUPERFAMILY SSF50022 3 110 4.19E-32 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 47 69 - T 29-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 SUPERFAMILY SSF55961 117 343 1.96E-57 T 29-03-2018 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 Pfam PF00355 Rieske [2Fe-2S] domain 7 86 1.8E-17 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 Gene3D G3DSA:3.90.380.10 107 347 2.0E-46 T 29-03-2018 AM474_RS18680 912dcf52f290747c510477b31fbcc07e 351 Gene3D G3DSA:2.102.10.10 2 106 1.9E-26 T 29-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM474_RS30915 6717490549abd63dd4fe3b14b96023e4 260 Gene3D G3DSA:3.20.20.150 1 260 1.6E-38 T 29-03-2018 AM474_RS30915 6717490549abd63dd4fe3b14b96023e4 260 Pfam PF01261 Xylose isomerase-like TIM barrel 111 198 6.6E-8 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS30915 6717490549abd63dd4fe3b14b96023e4 260 SUPERFAMILY SSF51658 5 250 1.21E-67 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS27130 f8258efbed6c488d0a4e95a5313d0f9c 254 Pfam PF04654 Protein of unknown function, DUF599 18 228 9.7E-62 T 29-03-2018 IPR006747 Protein of unknown function DUF599 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 Pfam PF13458 Periplasmic binding protein 29 365 4.4E-67 T 29-03-2018 IPR028081 Leucine-binding protein domain AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 Gene3D G3DSA:3.40.50.2300 23 246 9.1E-55 T 29-03-2018 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 3.8E-52 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 SUPERFAMILY SSF53822 28 366 6.8E-100 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS24240 9dda919dec5b72829f4ce496b899ca77 373 Gene3D G3DSA:3.40.50.2300 260 369 2.8E-13 T 29-03-2018 AM474_RS30370 1bc1f58c786723a25d6afdaa27ff4141 365 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 81 360 5.1E-12 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM474_RS30370 1bc1f58c786723a25d6afdaa27ff4141 365 PIRSF PIRSF017082 25 365 9.0E-75 T 29-03-2018 IPR005064 Bordetella uptake gene GO:0030288 AM474_RS26550 e8c81fefb3e9b0a14d075a1286c5fd4c 366 SUPERFAMILY SSF56266 1 362 6.02E-115 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS26550 e8c81fefb3e9b0a14d075a1286c5fd4c 366 Pfam PF03576 Peptidase family S58 19 344 1.7E-109 T 29-03-2018 IPR005321 Peptidase S58, DmpA AM474_RS26550 e8c81fefb3e9b0a14d075a1286c5fd4c 366 Gene3D G3DSA:3.60.70.12 1 362 1.5E-109 T 29-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AM474_RS14355 d4f1aa74b152b51b328b2b2e1be3ed85 619 PIRSF PIRSF028304 1 619 1.4E-191 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS14355 d4f1aa74b152b51b328b2b2e1be3ed85 619 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 618 7.4E-211 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS14355 d4f1aa74b152b51b328b2b2e1be3ed85 619 Pfam PF05947 Type VI secretion system, TssF 6 617 4.2E-229 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS20925 208e7b4832cc49bb5bb9fad765961e10 269 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 199 255 1.7E-16 T 29-03-2018 IPR019220 Domain of unknown function DUF2135 AM474_RS20925 208e7b4832cc49bb5bb9fad765961e10 269 PIRSF PIRSF012281 3 269 5.7E-127 T 29-03-2018 IPR012039 Uncharacterised conserved protein UCP012281 AM474_RS25835 c18af1142ce0391ece1e6d1b1fbc1326 403 Gene3D G3DSA:1.20.1250.20 199 390 2.0E-10 T 29-03-2018 AM474_RS25835 c18af1142ce0391ece1e6d1b1fbc1326 403 Gene3D G3DSA:1.20.1250.20 10 187 1.4E-19 T 29-03-2018 AM474_RS25835 c18af1142ce0391ece1e6d1b1fbc1326 403 Pfam PF07690 Major Facilitator Superfamily 22 320 4.9E-23 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS25835 c18af1142ce0391ece1e6d1b1fbc1326 403 SUPERFAMILY SSF103473 9 389 3.27E-41 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 29-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 Gene3D G3DSA:3.30.930.10 3 203 5.4E-58 T 29-03-2018 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 SUPERFAMILY SSF55681 6 204 2.57E-66 T 29-03-2018 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 158 3.6E-5 T 29-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.338 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 194 1.4E-62 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 1.0E-12 T 29-03-2018 AM474_RS09855 1b70f9ba5b30266d5b24540a1af2b04c 217 PIRSF PIRSF016262 4 215 2.1E-57 T 29-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM474_RS19275 fabc27c43f11f7a0d74abc0110e3f40f 249 SUPERFAMILY SSF53335 4 247 3.19E-36 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS19275 fabc27c43f11f7a0d74abc0110e3f40f 249 Gene3D G3DSA:3.40.50.150 8 249 4.9E-44 T 29-03-2018 AM474_RS19275 fabc27c43f11f7a0d74abc0110e3f40f 249 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 2 249 38.937 T 29-03-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 AM474_RS19275 fabc27c43f11f7a0d74abc0110e3f40f 249 Pfam PF13489 Methyltransferase domain 31 159 6.0E-15 T 29-03-2018 AM474_RS23700 d6093ebb0b986f1bb5fb3cc2a4134364 90 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 62 1.5E-10 T 29-03-2018 IPR022789 Antitoxin ParD AM474_RS23700 d6093ebb0b986f1bb5fb3cc2a4134364 90 Gene3D G3DSA:1.10.1220.10 5 44 1.2E-13 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS23700 d6093ebb0b986f1bb5fb3cc2a4134364 90 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 67 6.6E-17 T 29-03-2018 IPR022789 Antitoxin ParD AM474_RS23700 d6093ebb0b986f1bb5fb3cc2a4134364 90 SUPERFAMILY SSF47598 1 43 2.22E-11 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 SUPERFAMILY SSF103515 337 647 1.15E-36 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 Pfam PF04389 Peptidase family M28 82 286 7.2E-28 T 29-03-2018 IPR007484 Peptidase M28 AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 SMART SM00869 366 636 1.3E-37 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 Pfam PF03797 Autotransporter beta-domain 380 626 1.4E-41 T 29-03-2018 IPR005546 Autotransporter beta-domain AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 SUPERFAMILY SSF53187 38 286 5.43E-41 T 29-03-2018 AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 479 647 1.4E-14 T 29-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 Gene3D G3DSA:2.40.128.130 317 647 3.4E-38 T 29-03-2018 AM474_RS13090 18da113cdb1f44ee03db5ad250af9a44 647 Gene3D G3DSA:3.40.630.10 27 316 1.1E-37 T 29-03-2018 AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 SUPERFAMILY SSF53686 6 321 7.2E-93 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 303 6.9E-65 T 29-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 Gene3D G3DSA:3.40.50.1100 42 142 5.0E-37 T 29-03-2018 AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 Pfam PF00571 CBS domain 344 387 1.0E-9 T 29-03-2018 IPR000644 CBS domain AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 Gene3D G3DSA:3.40.50.1100 143 324 1.2E-48 T 29-03-2018 AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 SMART SM00116 344 391 1.8E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 29-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 SUPERFAMILY SSF54631 334 453 8.09E-18 T 29-03-2018 AM474_RS12710 dd6caeff5547eebc34fd668cb5512b7e 457 Gene3D G3DSA:3.10.580.10 326 456 9.9E-19 T 29-03-2018 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 Gene3D G3DSA:1.20.1600.10 132 395 6.0E-18 T 29-03-2018 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 442 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 387 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 407 422 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 364 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 328 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 4.1E-65 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 SUPERFAMILY SSF111369 266 347 3.14E-5 T 29-03-2018 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 Pfam PF00529 HlyD membrane-fusion protein of T1SS 35 399 2.9E-18 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 22 443 1.1E-141 T 29-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM474_RS06420 c2b30eca566d6646ad1d9dc910a523d2 443 Gene3D G3DSA:2.40.50.100 64 131 7.2E-12 T 29-03-2018 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 SUPERFAMILY SSF56235 26 553 4.82E-172 T 29-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 444 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 364 382 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 406 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 453 470 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 2.8E-73 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 547 1.2E-155 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 364 388 - T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS25765 52b5dd9be6ed64c2a551229b1d1b089a 557 Pfam PF01019 Gamma-glutamyltranspeptidase 45 550 3.1E-175 T 29-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 Gene3D G3DSA:3.40.50.720 3 249 2.7E-57 T 29-03-2018 AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 SUPERFAMILY SSF51735 8 245 1.99E-62 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-31 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS10395 fd0fdc6b01b015fd2d661445a825bff3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 8.0E-51 T 29-03-2018 AM474_RS02520 1cc7ac739e4caaa7bb2ab66741ed1986 89 SUPERFAMILY SSF47413 23 74 1.29E-9 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS02520 1cc7ac739e4caaa7bb2ab66741ed1986 89 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 23 78 3.1E-20 T 29-03-2018 IPR031856 Putative bacterial antitoxin YdaS AM474_RS02520 1cc7ac739e4caaa7bb2ab66741ed1986 89 Gene3D G3DSA:1.10.260.40 10 71 3.2E-15 T 29-03-2018 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 Gene3D G3DSA:3.90.1300.10 1 483 3.5E-182 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 SUPERFAMILY SSF75304 3 481 4.71E-171 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 10 475 94.273 T 29-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 473 1.9E-178 T 29-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 ProSitePatterns PS00571 Amidases signature. 150 181 - T 29-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AM474_RS20970 00d0d313995711fa5b9178eec4f14326 484 Pfam PF01425 Amidase 23 464 2.5E-161 T 29-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 129 27.961 T 29-03-2018 IPR023006 Uncharacterised protein family UPF0225 AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 Pfam PF02810 SEC-C motif 136 154 4.2E-7 T 29-03-2018 IPR004027 SEC-C motif AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 Pfam PF02810 SEC-C motif 6 20 6.6E-5 T 29-03-2018 IPR004027 SEC-C motif AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 Gene3D G3DSA:3.10.450.50 4 132 4.0E-40 T 29-03-2018 AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 Gene3D G3DSA:3.10.450.50 138 157 0.11 T 29-03-2018 AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 SUPERFAMILY SSF54427 25 130 5.38E-33 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS24055 830eab2a3117f044454a0e95bf689e08 157 SUPERFAMILY SSF103642 133 155 3.6E-7 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.40.50.980 46 186 2.4E-30 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.30.300.30 442 552 7.9E-24 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 SUPERFAMILY SSF56801 29 546 3.01E-131 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:2.30.38.10 364 441 7.1E-18 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Gene3D G3DSA:3.40.50.980 187 346 4.7E-38 T 29-03-2018 AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 536 1.0E-18 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS09375 43775f8f8330cda56877fa65dfe31d63 560 Pfam PF00501 AMP-binding enzyme 34 447 3.6E-89 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS25075 bb4048f23622b5ced22bb2dc6f758687 204 Gene3D G3DSA:3.40.50.1820 1 185 7.2E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25075 bb4048f23622b5ced22bb2dc6f758687 204 Pfam PF12697 Alpha/beta hydrolase family 4 172 1.4E-9 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS25075 bb4048f23622b5ced22bb2dc6f758687 204 SUPERFAMILY SSF53474 2 190 4.01E-24 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 265 6.4E-20 T 29-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 SUPERFAMILY SSF111369 51 252 1.44E-24 T 29-03-2018 AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.50.100 177 383 3.2E-7 T 29-03-2018 AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:2.40.50.100 60 124 1.9E-18 T 29-03-2018 AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 264 4.3E-39 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS31540 a52870b0b55ce24dc94eb9dd09c9f41a 391 Gene3D G3DSA:1.10.287.470 125 175 3.4E-5 T 29-03-2018 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Pfam PF01568 Molydopterin dinucleotide binding domain 702 818 1.7E-15 T 29-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 SUPERFAMILY SSF53706 1 657 4.32E-237 T 29-03-2018 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 SUPERFAMILY SSF50692 636 667 2.69E-44 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 SUPERFAMILY SSF50692 696 825 2.69E-44 T 29-03-2018 IPR009010 Aspartate decarboxylase-like domain AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Gene3D G3DSA:2.40.40.20 647 825 9.5E-40 T 29-03-2018 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Pfam PF00384 Molybdopterin oxidoreductase 12 394 3.7E-20 T 29-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Gene3D G3DSA:3.40.228.10 1 285 9.4E-73 T 29-03-2018 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Gene3D G3DSA:3.40.228.10 351 567 5.1E-6 T 29-03-2018 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 824 0.0 T 29-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 AM474_RS19165 766beb10f84ec38001508ded11e1c4ac 825 Gene3D G3DSA:3.40.228.10 568 646 2.4E-12 T 29-03-2018 AM474_RS15525 c5f88857c998251441d7a64baa2aa033 67 Pfam PF06568 Domain of unknown function (DUF1127) 22 57 7.7E-10 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AM474_RS10205 123abd61caec8e10874139fc2c9e2fd3 232 Pfam PF03922 OmpW family 28 232 1.2E-76 T 29-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AM474_RS10205 123abd61caec8e10874139fc2c9e2fd3 232 SUPERFAMILY SSF56925 28 232 3.14E-26 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS10205 123abd61caec8e10874139fc2c9e2fd3 232 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 224 232 - T 29-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 AM474_RS10205 123abd61caec8e10874139fc2c9e2fd3 232 Gene3D G3DSA:2.40.160.20 27 232 1.8E-32 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS06100 3e807a411ff22d6883e4a5081a1ddbef 156 SUPERFAMILY SSF140566 6 130 3.01E-29 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM474_RS06100 3e807a411ff22d6883e4a5081a1ddbef 156 Gene3D G3DSA:1.20.58.300 4 130 3.9E-25 T 29-03-2018 AM474_RS06100 3e807a411ff22d6883e4a5081a1ddbef 156 Pfam PF05130 FlgN protein 2 145 2.7E-31 T 29-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 AM474_RS09280 9b839762c83b82d03bf154d581b7de38 520 SUPERFAMILY SSF56300 137 517 7.78E-45 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS09280 9b839762c83b82d03bf154d581b7de38 520 Gene3D G3DSA:3.60.21.10 136 520 2.2E-36 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS09280 9b839762c83b82d03bf154d581b7de38 520 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 42 128 1.2E-17 T 29-03-2018 IPR032093 Phospholipase D, N-terminal AM474_RS09280 9b839762c83b82d03bf154d581b7de38 520 Pfam PF09423 PhoD-like phosphatase 148 501 1.1E-87 T 29-03-2018 IPR018946 Alkaline phosphatase D-related AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 Pfam PF01551 Peptidase family M23 286 366 1.7E-11 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 SUPERFAMILY SSF51261 226 365 6.28E-18 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 372 395 6.2E-57 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 293 311 6.2E-57 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 266 284 6.2E-57 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 345 365 6.2E-57 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 244 265 6.2E-57 T 29-03-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 AM474_RS28655 5f892981c9eb9003aa68428b89efe987 418 Gene3D G3DSA:2.70.70.10 237 418 1.9E-23 T 29-03-2018 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 SUPERFAMILY SSF117987 94 202 4.45E-28 T 29-03-2018 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 SUPERFAMILY SSF117987 1 78 1.67E-20 T 29-03-2018 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 SMART SM01101 1 202 8.9E-66 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 Gene3D G3DSA:3.30.70.1210 93 202 5.5E-27 T 29-03-2018 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 Gene3D G3DSA:3.30.70.1200 1 84 1.2E-19 T 29-03-2018 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 202 1.5E-24 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 AM474_RS25250 dba6f0454a51e459e73213e8d22f8868 203 Pfam PF08798 CRISPR associated protein 1 202 1.2E-51 T 29-03-2018 IPR010179 CRISPR-associated protein Cse3 AM474_RS21795 b5135391a2558f535146ab51707128de 335 PIRSF PIRSF002849 1 335 9.6E-130 T 29-03-2018 AM474_RS21795 b5135391a2558f535146ab51707128de 335 Gene3D G3DSA:1.10.8.300 222 330 3.3E-29 T 29-03-2018 AM474_RS21795 b5135391a2558f535146ab51707128de 335 Gene3D G3DSA:3.40.50.300 37 203 2.2E-28 T 29-03-2018 AM474_RS21795 b5135391a2558f535146ab51707128de 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 56 186 8.7E-64 T 29-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AM474_RS21795 b5135391a2558f535146ab51707128de 335 SMART SM00382 53 194 3.4E-4 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS21795 b5135391a2558f535146ab51707128de 335 SUPERFAMILY SSF52540 24 307 1.51E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 SUPERFAMILY SSF50129 1 140 3.5E-41 T 29-03-2018 IPR011032 GroES-like AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 Pfam PF00107 Zinc-binding dehydrogenase 151 272 4.9E-32 T 29-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 Gene3D G3DSA:3.90.180.10 1 134 9.4E-45 T 29-03-2018 AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 SUPERFAMILY SSF51735 111 274 3.18E-52 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 SMART SM00829 10 322 1.6E-57 T 29-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 Gene3D G3DSA:3.40.50.720 135 308 7.8E-43 T 29-03-2018 AM474_RS16655 3630fa4048043aac7648bb56bad47e3d 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 7.8E-11 T 29-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM474_RS03170 b41f13fcda9f9869356918c2144ef5be 444 Pfam PF11902 Protein of unknown function (DUF3422) 26 434 1.6E-147 T 29-03-2018 IPR021830 Protein of unknown function DUF3422 AM474_RS24645 9dd3be8c81a58dc20d399c7cb28238f7 444 Gene3D G3DSA:1.20.1250.20 12 212 6.3E-26 T 29-03-2018 AM474_RS24645 9dd3be8c81a58dc20d399c7cb28238f7 444 SUPERFAMILY SSF103473 14 418 4.45E-57 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS24645 9dd3be8c81a58dc20d399c7cb28238f7 444 Pfam PF07690 Major Facilitator Superfamily 27 387 9.0E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS24645 9dd3be8c81a58dc20d399c7cb28238f7 444 Gene3D G3DSA:1.20.1250.20 226 433 2.9E-20 T 29-03-2018 AM474_RS24645 9dd3be8c81a58dc20d399c7cb28238f7 444 PIRSF PIRSF002808 5 435 3.2E-79 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM474_RS29655 a019b8fc72fd1a733dd85359da07df66 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 173 8.0E-22 T 29-03-2018 IPR023214 HAD-like domain AM474_RS29655 a019b8fc72fd1a733dd85359da07df66 222 SUPERFAMILY SSF56784 1 194 9.8E-43 T 29-03-2018 IPR023214 HAD-like domain AM474_RS29655 a019b8fc72fd1a733dd85359da07df66 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 172 8.1E-19 T 29-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AM474_RS29655 a019b8fc72fd1a733dd85359da07df66 222 Gene3D G3DSA:3.40.50.1000 64 200 1.1E-28 T 29-03-2018 IPR023214 HAD-like domain AM474_RS29655 a019b8fc72fd1a733dd85359da07df66 222 Gene3D G3DSA:1.10.150.240 11 63 9.7E-5 T 29-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 7.6E-91 T 29-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 SUPERFAMILY SSF52540 4 242 1.42E-58 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 Gene3D G3DSA:3.40.50.300 1 270 5.4E-60 T 29-03-2018 AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 SMART SM00382 29 238 9.6E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS06295 ebce03896ab25c1b7aed2c1f80081033 278 Pfam PF00005 ABC transporter 21 181 4.8E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 43.731 T 29-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 261 349 1.1E-19 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:4.10.1250.10 231 275 7.0E-16 T 29-03-2018 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:2.40.30.110 277 358 3.1E-19 T 29-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 PIRSF PIRSF006487 1 358 1.5E-80 T 29-03-2018 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 SUPERFAMILY SSF103025 4 276 4.71E-88 T 29-03-2018 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 4.2E-83 T 29-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:3.30.1360.120 132 230 5.3E-15 T 29-03-2018 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 Gene3D G3DSA:3.30.1360.120 3 131 5.1E-34 T 29-03-2018 AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 SUPERFAMILY SSF101790 269 357 9.81E-26 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM474_RS16755 c7518912742a74abfcf950a04d7721ac 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 5.8E-126 T 29-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 SUPERFAMILY SSF158710 50 192 5.23E-51 T 29-03-2018 IPR023153 PSPTO4464-like domain AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 Gene3D G3DSA:1.10.60.30 125 200 5.9E-29 T 29-03-2018 AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 PIRSF PIRSF016183 24 198 1.7E-67 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 29 194 21.511 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 Gene3D G3DSA:1.10.60.30 51 120 3.9E-26 T 29-03-2018 AM474_RS21020 61b4d52f3cf694f8901d86a63d0a6916 200 Pfam PF04751 Protein of unknown function (DUF615) 39 190 5.1E-55 T 29-03-2018 IPR006839 Ribosome-associated, YjgA AM474_RS21400 c4347123f802c085f3d37aa8f19d712f 192 Gene3D G3DSA:1.20.1200.10 17 191 8.4E-58 T 29-03-2018 AM474_RS21400 c4347123f802c085f3d37aa8f19d712f 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 186 1.0E-84 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM474_RS21400 c4347123f802c085f3d37aa8f19d712f 192 Pfam PF01923 Cobalamin adenosyltransferase 8 173 3.2E-56 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM474_RS21400 c4347123f802c085f3d37aa8f19d712f 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 186 7.5E-53 T 29-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM474_RS21400 c4347123f802c085f3d37aa8f19d712f 192 SUPERFAMILY SSF89028 7 186 4.12E-60 T 29-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 Pfam PF00581 Rhodanese-like domain 8 132 1.1E-15 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 Pfam PF00581 Rhodanese-like domain 160 273 4.9E-11 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 Gene3D G3DSA:3.40.250.10 1 151 1.9E-31 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 SMART SM00450 158 278 2.4E-11 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 SMART SM00450 7 135 4.3E-17 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 SUPERFAMILY SSF52821 162 283 2.36E-32 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 SUPERFAMILY SSF52821 2 156 1.44E-38 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS25525 822dc64513c96ea1a2d8efc9b302afda 284 Gene3D G3DSA:3.40.250.10 152 284 2.4E-24 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS02715 bdf7a1caff6bec8f20527b26649dff0c 80 Pfam PF11747 Killing trait 11 76 7.1E-26 T 29-03-2018 IPR021070 Killing trait, RebB AM474_RS25675 663000ea249daa0e8e0b6fa48708ff5b 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 4.8E-88 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM474_RS25675 663000ea249daa0e8e0b6fa48708ff5b 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AM474_RS25675 663000ea249daa0e8e0b6fa48708ff5b 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 17.448 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM474_RS25675 663000ea249daa0e8e0b6fa48708ff5b 296 Pfam PF01040 UbiA prenyltransferase family 19 266 3.1E-57 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM474_RS28430 52f4fd3f8b2e3b368d67d25a4dce266a 104 Gene3D G3DSA:3.30.1050.10 2 104 3.2E-30 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS28430 52f4fd3f8b2e3b368d67d25a4dce266a 104 SUPERFAMILY SSF55718 2 102 1.82E-28 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS28430 52f4fd3f8b2e3b368d67d25a4dce266a 104 Pfam PF02036 SCP-2 sterol transfer family 16 102 3.2E-21 T 29-03-2018 IPR003033 SCP2 sterol-binding domain AM474_RS23415 dfe1800b86e8f1558a3d6b3414394cf5 84 Gene3D G3DSA:3.10.510.10 1 84 1.5E-28 T 29-03-2018 IPR023122 NE1680-like domain AM474_RS23415 dfe1800b86e8f1558a3d6b3414394cf5 84 Pfam PF09630 Domain of unknown function (DUF2024) 1 80 7.8E-30 T 29-03-2018 IPR018592 Protein of unknown function DUF2024 AM474_RS23415 dfe1800b86e8f1558a3d6b3414394cf5 84 SUPERFAMILY SSF160766 1 84 2.48E-32 T 29-03-2018 IPR023122 NE1680-like domain AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 Gene3D G3DSA:3.10.580.10 234 382 5.2E-33 T 29-03-2018 AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 Pfam PF04982 HPP family 58 176 3.7E-30 T 29-03-2018 IPR007065 HPP AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 SUPERFAMILY SSF54631 232 374 4.11E-34 T 29-03-2018 AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 SMART SM00116 323 371 2.0E-11 T 29-03-2018 IPR000644 CBS domain AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 SMART SM00116 251 299 2.0E-7 T 29-03-2018 IPR000644 CBS domain AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 Pfam PF00571 CBS domain 245 297 9.4E-11 T 29-03-2018 IPR000644 CBS domain AM474_RS28560 a5a37169a9bdb4f7f3dc1e8e2842c8e3 385 Pfam PF00571 CBS domain 318 370 2.0E-12 T 29-03-2018 IPR000644 CBS domain AM474_RS20085 ee3ccff8782c86da046a3c187c08ebac 185 Gene3D G3DSA:3.40.50.2020 9 184 4.6E-34 T 29-03-2018 AM474_RS20085 ee3ccff8782c86da046a3c187c08ebac 185 Pfam PF00156 Phosphoribosyl transferase domain 18 145 2.2E-24 T 29-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM474_RS20085 ee3ccff8782c86da046a3c187c08ebac 185 SUPERFAMILY SSF53271 15 183 2.49E-43 T 29-03-2018 IPR029057 Phosphoribosyltransferase-like AM474_RS22665 4cdf61e2b2d2b9afce1e5e2989af2751 107 Pfam PF11804 Protein of unknown function (DUF3325) 2 101 1.4E-30 T 29-03-2018 IPR021762 Protein of unknown function DUF3325 AM474_RS31560 77b6ba6dd57858d3c366dec7a8008657 448 SUPERFAMILY SSF51556 360 443 2.27E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS31560 77b6ba6dd57858d3c366dec7a8008657 448 SUPERFAMILY SSF51556 42 303 2.27E-78 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS31560 77b6ba6dd57858d3c366dec7a8008657 448 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 49 436 1.2E-106 T 29-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AM474_RS31560 77b6ba6dd57858d3c366dec7a8008657 448 Gene3D G3DSA:3.20.20.140 40 447 3.9E-93 T 29-03-2018 AM474_RS30700 c7e1666f2e04ed1578200c89a71a03ac 402 SUPERFAMILY SSF56349 183 375 3.83E-15 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS30700 c7e1666f2e04ed1578200c89a71a03ac 402 Gene3D G3DSA:1.10.443.10 161 375 2.8E-19 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS30700 c7e1666f2e04ed1578200c89a71a03ac 402 Pfam PF00589 Phage integrase family 185 375 4.9E-9 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS15150 10852a19e0eef21520b14d1be3a91f85 160 Gene3D G3DSA:3.10.129.10 2 156 2.0E-49 T 29-03-2018 AM474_RS15150 10852a19e0eef21520b14d1be3a91f85 160 SUPERFAMILY SSF54637 4 154 6.56E-46 T 29-03-2018 IPR029069 HotDog domain AM474_RS15150 10852a19e0eef21520b14d1be3a91f85 160 Pfam PF03061 Thioesterase superfamily 23 96 2.5E-18 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS16560 221e900e26040134f33aae0e34ca02df 159 Pfam PF09523 Protein of unknown function (DUF2390) 5 110 1.6E-32 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AM474_RS16560 221e900e26040134f33aae0e34ca02df 159 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 4 113 7.5E-30 T 29-03-2018 IPR012659 Conserved hypothetical protein CHP02444 AM474_RS07595 04fa9fa48b6fd250740916f17a2eca1f 168 Gene3D G3DSA:3.30.910.20 11 165 6.0E-17 T 29-03-2018 AM474_RS07595 04fa9fa48b6fd250740916f17a2eca1f 168 Pfam PF03938 Outer membrane protein (OmpH-like) 9 164 7.7E-25 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM474_RS07595 04fa9fa48b6fd250740916f17a2eca1f 168 SMART SM00935 11 165 1.2E-37 T 29-03-2018 IPR005632 Chaperone protein Skp GO:0051082 AM474_RS07595 04fa9fa48b6fd250740916f17a2eca1f 168 SUPERFAMILY SSF111384 22 165 9.55E-29 T 29-03-2018 IPR024930 Skp domain AM474_RS06815 6ddb749ed148fefdad374cff3a595247 188 Hamap MF_00146 dCTP deaminase [dcd]. 1 188 28.976 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM474_RS06815 6ddb749ed148fefdad374cff3a595247 188 Pfam PF00692 dUTPase 76 184 9.1E-9 T 29-03-2018 IPR029054 dUTPase-like AM474_RS06815 6ddb749ed148fefdad374cff3a595247 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 2.4E-51 T 29-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 AM474_RS06815 6ddb749ed148fefdad374cff3a595247 188 SUPERFAMILY SSF51283 3 187 1.83E-53 T 29-03-2018 IPR029054 dUTPase-like AM474_RS06815 6ddb749ed148fefdad374cff3a595247 188 Gene3D G3DSA:2.70.40.10 1 161 1.0E-59 T 29-03-2018 AM474_RS25540 92e5692164a1bc14c5feaf562071a8be 97 Hamap MF_01866 Protein YcgL [ycgL]. 3 90 26.095 T 29-03-2018 IPR027354 YcgL domain AM474_RS25540 92e5692164a1bc14c5feaf562071a8be 97 Pfam PF05166 YcgL domain 5 77 7.0E-32 T 29-03-2018 IPR027354 YcgL domain AM474_RS25540 92e5692164a1bc14c5feaf562071a8be 97 SUPERFAMILY SSF160191 2 94 3.66E-36 T 29-03-2018 AM474_RS25540 92e5692164a1bc14c5feaf562071a8be 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 78 4.0E-38 T 29-03-2018 IPR027354 YcgL domain AM474_RS27125 9ea4270d80bae49b36eb6c1acb82404d 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 1.4E-164 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM474_RS27125 9ea4270d80bae49b36eb6c1acb82404d 437 Pfam PF05525 Branched-chain amino acid transport protein 8 427 1.6E-160 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM474_RS09660 1f9394f41dd89d215ec789d304bda257 682 Gene3D G3DSA:1.10.443.10 283 514 2.2E-11 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS03110 940f23cbc080ec85552377e1d2f586fe 465 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 49 458 2.1E-179 T 29-03-2018 IPR021204 Integrating conjugative element protein, PFL4711 AM474_RS30680 c689675c138eed74775a9c57a7b2432b 154 Pfam PF00583 Acetyltransferase (GNAT) family 46 140 1.7E-13 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS30680 c689675c138eed74775a9c57a7b2432b 154 Gene3D G3DSA:3.40.630.30 1 152 5.9E-22 T 29-03-2018 AM474_RS30680 c689675c138eed74775a9c57a7b2432b 154 SUPERFAMILY SSF55729 7 147 1.15E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS10215 73338df551e2885ab9ece3ba10ad9bc8 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 3.9E-66 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS10215 73338df551e2885ab9ece3ba10ad9bc8 309 SUPERFAMILY SSF51735 5 306 2.64E-90 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10215 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.90.25.10 175 308 8.8E-33 T 29-03-2018 AM474_RS10215 73338df551e2885ab9ece3ba10ad9bc8 309 Gene3D G3DSA:3.40.50.720 4 174 1.1E-40 T 29-03-2018 AM474_RS27815 3c7dfa5a87bc9e0723d8e92cc982d439 85 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 13 85 4.7E-22 T 29-03-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 AM474_RS27815 3c7dfa5a87bc9e0723d8e92cc982d439 85 SUPERFAMILY SSF140129 8 81 1.83E-21 T 29-03-2018 AM474_RS27815 3c7dfa5a87bc9e0723d8e92cc982d439 85 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 13 85 5.4E-26 T 29-03-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 AM474_RS16695 4ef7f8687759cdb74cd5394ee2b986fc 104 Pfam PF05164 Cell division protein ZapA 8 90 3.5E-23 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM474_RS16695 4ef7f8687759cdb74cd5394ee2b986fc 104 SUPERFAMILY SSF102829 7 96 3.14E-25 T 29-03-2018 IPR007838 Cell division protein ZapA-like AM474_RS20875 9db333ca9bcdc9965207efc43d448567 484 Pfam PF03573 outer membrane porin, OprD family 62 482 5.3E-123 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS20875 9db333ca9bcdc9965207efc43d448567 484 Gene3D G3DSA:2.40.160.10 13 484 1.7E-114 T 29-03-2018 AM474_RS31355 734388b9c24aba0e73a422f2bac08fd8 384 SUPERFAMILY SSF52540 52 180 1.48E-15 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31355 734388b9c24aba0e73a422f2bac08fd8 384 Pfam PF03969 AFG1-like ATPase 11 293 6.8E-81 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM474_RS31355 734388b9c24aba0e73a422f2bac08fd8 384 Pfam PF03969 AFG1-like ATPase 316 376 6.4E-14 T 29-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM474_RS31355 734388b9c24aba0e73a422f2bac08fd8 384 Gene3D G3DSA:3.40.50.300 28 343 4.5E-14 T 29-03-2018 AM474_RS29370 38dc09edee3601b6fd4cdff8a45d8cfa 300 Gene3D G3DSA:3.20.20.70 2 299 7.0E-112 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS29370 38dc09edee3601b6fd4cdff8a45d8cfa 300 SUPERFAMILY SSF51569 1 289 8.61E-73 T 29-03-2018 AM474_RS29370 38dc09edee3601b6fd4cdff8a45d8cfa 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 29-03-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 AM474_RS29370 38dc09edee3601b6fd4cdff8a45d8cfa 300 Pfam PF00682 HMGL-like 6 278 3.7E-53 T 29-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AM474_RS28490 a05858a344fce02fbda2ed011bdf3e86 120 Gene3D G3DSA:4.10.1210.10 21 113 3.4E-36 T 29-03-2018 IPR015073 Atu1913-like AM474_RS28490 a05858a344fce02fbda2ed011bdf3e86 120 Pfam PF08980 Domain of unknown function (DUF1883) 21 95 2.8E-32 T 29-03-2018 IPR015073 Atu1913-like AM474_RS28490 a05858a344fce02fbda2ed011bdf3e86 120 SUPERFAMILY SSF141099 20 116 7.59E-38 T 29-03-2018 IPR015073 Atu1913-like AM474_RS10335 46b24cd7f0dfd503b2817af08afe53c0 170 SUPERFAMILY SSF50475 11 164 1.52E-47 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS10335 46b24cd7f0dfd503b2817af08afe53c0 170 Pfam PF01613 Flavin reductase like domain 15 163 3.7E-28 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM474_RS10335 46b24cd7f0dfd503b2817af08afe53c0 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 11 163 4.0E-72 T 29-03-2018 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 KEGG: 00740+1.5.1.36 AM474_RS10335 46b24cd7f0dfd503b2817af08afe53c0 170 Gene3D G3DSA:2.30.110.10 4 170 1.4E-35 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS10335 46b24cd7f0dfd503b2817af08afe53c0 170 SMART SM00903 15 162 1.0E-52 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 51 72 3.0E-5 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.0E-26 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 Pfam PF00550 Phosphopantetheine attachment site 7 73 5.4E-15 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 SUPERFAMILY SSF47336 1 77 1.28E-20 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 20.119 T 29-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 29-03-2018 IPR006162 Phosphopantetheine attachment site AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 Gene3D G3DSA:1.10.1200.10 1 78 4.2E-24 T 29-03-2018 AM474_RS28645 c029632995daefbcbfc1fd661a9ddd6d 79 SMART SM00823 Phosphopantetheine attachment site 5 77 0.004 T 29-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 303 386 9.0E-31 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 SUPERFAMILY SSF64518 1 387 8.5E-105 T 29-03-2018 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.6E-43 T 29-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 Gene3D G3DSA:1.20.1330.10 40 224 3.8E-46 T 29-03-2018 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 Gene3D G3DSA:1.20.1330.10 225 359 1.6E-26 T 29-03-2018 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 PRINTS PR00207 Flagellin signature 37 54 1.2E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 PRINTS PR00207 Flagellin signature 76 95 1.2E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM474_RS24360 5f74764c7bd8b3e35b6822c76d8935d3 387 PRINTS PR00207 Flagellin signature 111 134 1.2E-25 T 29-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 SUPERFAMILY SSF141673 4 133 1.27E-33 T 29-03-2018 AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 SUPERFAMILY SSF50800 152 267 5.93E-22 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 SUPERFAMILY SSF50800 2 59 5.93E-22 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 Pfam PF03473 MOSC domain 142 265 3.3E-31 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 Pfam PF03476 MOSC N-terminal beta barrel domain 1 119 2.2E-34 T 29-03-2018 IPR005303 MOSC, N-terminal beta barrel AM474_RS04325 086adade50a8c0d289b63f4c50e0e703 268 Gene3D G3DSA:2.40.33.20 1 268 3.9E-55 T 29-03-2018 AM474_RS25125 b273e9cfaf219f8a8801686a55567570 201 Gene3D G3DSA:3.40.50.360 1 199 1.3E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS25125 b273e9cfaf219f8a8801686a55567570 201 SUPERFAMILY SSF52218 1 194 1.49E-52 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS25125 b273e9cfaf219f8a8801686a55567570 201 Pfam PF02525 Flavodoxin-like fold 1 185 2.7E-44 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS19685 faa177adffb208e3343f803b328be996 411 Gene3D G3DSA:3.90.1150.10 13 259 4.3E-42 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19685 faa177adffb208e3343f803b328be996 411 Pfam PF00155 Aminotransferase class I and II 37 386 4.9E-59 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS19685 faa177adffb208e3343f803b328be996 411 Gene3D G3DSA:3.90.1150.10 260 397 3.5E-37 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS19685 faa177adffb208e3343f803b328be996 411 SUPERFAMILY SSF53383 10 394 1.88E-106 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS26435 75b123d186b72cedd1ba4158eb82ab9c 296 SUPERFAMILY SSF50341 148 282 2.75E-15 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26435 75b123d186b72cedd1ba4158eb82ab9c 296 Gene3D G3DSA:2.40.50.180 171 283 1.5E-7 T 29-03-2018 AM474_RS26435 75b123d186b72cedd1ba4158eb82ab9c 296 PIRSF PIRSF020479 1 296 5.4E-114 T 29-03-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like AM474_RS26435 75b123d186b72cedd1ba4158eb82ab9c 296 SMART SM00260 146 281 6.1E-22 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS26435 75b123d186b72cedd1ba4158eb82ab9c 296 Pfam PF01584 CheW-like domain 150 281 1.8E-13 T 29-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 AM474_RS18425 46c633bf861e7f7d8e0094dc66c1697e 180 Gene3D G3DSA:3.30.420.10 1 180 5.2E-31 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS18425 46c633bf861e7f7d8e0094dc66c1697e 180 Pfam PF00929 Exonuclease 8 169 4.8E-34 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS18425 46c633bf861e7f7d8e0094dc66c1697e 180 SMART SM00479 6 179 1.1E-22 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS18425 46c633bf861e7f7d8e0094dc66c1697e 180 SUPERFAMILY SSF53098 2 179 2.74E-49 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS18425 46c633bf861e7f7d8e0094dc66c1697e 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 44.191 T 29-03-2018 IPR022894 Oligoribonuclease GO:0000175 AM474_RS25405 d859f4da05c4b1d797fa8d009b6c8cc5 314 PIRSF PIRSF029792 1 313 2.8E-95 T 29-03-2018 IPR008794 Proline racemase family AM474_RS25405 d859f4da05c4b1d797fa8d009b6c8cc5 314 SUPERFAMILY SSF54506 2 312 1.21E-100 T 29-03-2018 AM474_RS25405 d859f4da05c4b1d797fa8d009b6c8cc5 314 Gene3D G3DSA:3.10.310.10 1 141 3.3E-32 T 29-03-2018 AM474_RS25405 d859f4da05c4b1d797fa8d009b6c8cc5 314 Gene3D G3DSA:3.10.310.10 142 290 3.0E-51 T 29-03-2018 AM474_RS25405 d859f4da05c4b1d797fa8d009b6c8cc5 314 Pfam PF05544 Proline racemase 6 312 8.1E-111 T 29-03-2018 IPR008794 Proline racemase family AM474_RS03980 436906dcdf3ef6daffc9e37f99b56ac3 298 Gene3D G3DSA:3.20.20.70 9 288 2.4E-29 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS03980 436906dcdf3ef6daffc9e37f99b56ac3 298 SMART SM00729 22 237 7.9E-30 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS03980 436906dcdf3ef6daffc9e37f99b56ac3 298 SUPERFAMILY SSF102114 6 210 8.76E-32 T 29-03-2018 AM474_RS03980 436906dcdf3ef6daffc9e37f99b56ac3 298 Pfam PF04055 Radical SAM superfamily 27 185 2.2E-18 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 SUPERFAMILY SSF46785 1 110 6.98E-27 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.0E-23 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:1.10.10.10 1 83 4.8E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:3.40.190.10 177 261 1.3E-19 T 29-03-2018 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-10 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 Pfam PF03466 LysR substrate binding domain 87 288 1.5E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 SUPERFAMILY SSF53850 86 289 3.86E-44 T 29-03-2018 AM474_RS04845 84d599b7b8d2ef94e44a277360c99edd 297 Gene3D G3DSA:3.40.190.10 87 176 5.2E-23 T 29-03-2018 AM474_RS11350 bdbb2f6593686af0e2581f88800b8a7e 360 Gene3D G3DSA:3.30.700.10 289 360 2.4E-6 T 29-03-2018 AM474_RS11350 bdbb2f6593686af0e2581f88800b8a7e 360 SUPERFAMILY SSF54523 292 325 2.83E-5 T 29-03-2018 AM474_RS11350 bdbb2f6593686af0e2581f88800b8a7e 360 Gene3D G3DSA:2.20.28.20 106 130 2.9E-5 T 29-03-2018 AM474_RS11350 bdbb2f6593686af0e2581f88800b8a7e 360 Pfam PF05656 Protein of unknown function (DUF805) 177 279 4.8E-21 T 29-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AM474_RS30675 110d6f5d47420c503c1929694dbf651e 301 SUPERFAMILY SSF103481 49 136 1.83E-9 T 29-03-2018 AM474_RS30675 110d6f5d47420c503c1929694dbf651e 301 Pfam PF00892 EamA-like transporter family 2 135 4.0E-12 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 5.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 5.0E-6 T 29-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 Gene3D G3DSA:1.10.10.60 205 250 6.8E-9 T 29-03-2018 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 Pfam PF12833 Helix-turn-helix domain 173 248 3.1E-25 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 SUPERFAMILY SSF46689 203 248 1.7E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 244 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 Pfam PF02311 AraC-like ligand binding domain 12 105 3.3E-9 T 29-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 Gene3D G3DSA:2.60.120.10 1 120 5.7E-12 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 SMART SM00342 166 248 3.8E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 Gene3D G3DSA:1.10.10.60 146 204 1.4E-15 T 29-03-2018 AM474_RS25175 ac583a1b4466a2ee6c58e4df7f8b9610 260 SUPERFAMILY SSF51182 6 181 9.68E-22 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 Gene3D G3DSA:3.40.190.10 181 266 7.1E-18 T 29-03-2018 AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 8.1E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 SUPERFAMILY SSF46785 4 87 8.76E-22 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 Gene3D G3DSA:1.10.10.10 2 85 5.0E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 Pfam PF03466 LysR substrate binding domain 90 295 4.8E-40 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 Gene3D G3DSA:3.40.190.10 93 180 1.2E-13 T 29-03-2018 AM474_RS29115 cab1634dc395504f36bb8a38323ced26 311 SUPERFAMILY SSF53850 90 298 1.72E-40 T 29-03-2018 AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 4.1E-58 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 SMART SM00833 256 373 5.8E-46 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 373 4.0E-29 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Gene3D G3DSA:3.30.1220.10 240 374 1.7E-34 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 Gene3D G3DSA:3.40.50.300 2 229 2.1E-52 T 29-03-2018 AM474_RS15065 a5810862ac6d3cdc3afa5166a0ccfc8f 400 SUPERFAMILY SSF52540 3 310 4.78E-45 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS13590 dc6c429c65b8d9b806051f692f228528 292 SUPERFAMILY SSF103481 53 152 1.7E-14 T 29-03-2018 AM474_RS13590 dc6c429c65b8d9b806051f692f228528 292 Pfam PF00892 EamA-like transporter family 16 148 2.4E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS13590 dc6c429c65b8d9b806051f692f228528 292 Pfam PF00892 EamA-like transporter family 159 286 3.4E-8 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS13590 dc6c429c65b8d9b806051f692f228528 292 SUPERFAMILY SSF103481 195 291 1.44E-14 T 29-03-2018 AM474_RS28060 c23294aa1f67bb980fb1cff6a81abd5f 395 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 266 393 6.8E-27 T 29-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 AM474_RS28060 c23294aa1f67bb980fb1cff6a81abd5f 395 Pfam PF13511 Domain of unknown function (DUF4124) 144 180 1.3E-5 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS27745 91b3b2839b4b0328e0dec4cae7487664 98 Pfam PF07216 LcrG protein 9 98 9.0E-42 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AM474_RS27745 91b3b2839b4b0328e0dec4cae7487664 98 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 9 98 4.0E-18 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AM474_RS27745 91b3b2839b4b0328e0dec4cae7487664 98 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 9 98 5.8E-42 T 29-03-2018 IPR009863 Type III secretion protein, LcrG AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 163 5.0E-21 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 Pfam PF08281 Sigma-70, region 4 111 163 2.5E-15 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 Gene3D G3DSA:1.10.10.10 72 168 5.0E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 Gene3D G3DSA:1.10.1740.10 6 71 2.3E-15 T 29-03-2018 AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 SUPERFAMILY SSF88946 8 77 3.26E-13 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 Pfam PF04542 Sigma-70 region 2 15 79 2.6E-13 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS12325 9443d87a751eae16d094addd4c40f861 172 SUPERFAMILY SSF88659 89 167 1.38E-13 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS00725 d652f8349c532cf851538c5336201121 131 Pfam PF12553 Protein of unknown function (DUF3742) 9 107 1.0E-20 T 29-03-2018 IPR022213 Protein of unknown function DUF3742 AM474_RS25560 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Pfam PF03692 Putative zinc- or iron-chelating domain 26 93 1.5E-9 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM474_RS25560 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 PIRSF PIRSF006173 1 149 7.3E-67 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM474_RS25560 ffbe6f0d3e7628b7c1a7161d98d19ff8 149 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 4 149 42.239 T 29-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 AM474_RS14220 05461bdda06f8fd446b4ef2497d42897 304 Pfam PF01040 UbiA prenyltransferase family 29 285 3.8E-60 T 29-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM474_RS14220 05461bdda06f8fd446b4ef2497d42897 304 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 29-03-2018 IPR030470 UbiA prenyltransferase conserved site AM474_RS14220 05461bdda06f8fd446b4ef2497d42897 304 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 297 19.815 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM474_RS14220 05461bdda06f8fd446b4ef2497d42897 304 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 296 6.3E-106 T 29-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 Pfam PF13280 WYL domain 142 311 7.6E-33 T 29-03-2018 IPR026881 WYL domain AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 SUPERFAMILY SSF46785 7 64 1.22E-9 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 Gene3D G3DSA:1.10.10.10 1 66 5.6E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 PIRSF PIRSF016838 64 320 1.9E-23 T 29-03-2018 IPR028349 Protein PafC AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 PIRSF PIRSF016838 1 55 0.089 T 29-03-2018 IPR028349 Protein PafC AM474_RS26455 538e13f6e621eaa8dc884aa3c06759db 323 Pfam PF08279 HTH domain 7 62 9.3E-16 T 29-03-2018 IPR013196 Helix-turn-helix, type 11 AM474_RS11695 9dea489d001bc25dfc8bb5f62043c462 517 Pfam PF04293 SpoVR like protein 12 443 1.6E-177 T 29-03-2018 IPR007390 Sporulation stage V, protein R AM474_RS09990 c209bb3b42e37e4e2fcbf248f9224997 464 Gene3D G3DSA:1.10.220.70 57 141 4.2E-39 T 29-03-2018 AM474_RS09990 c209bb3b42e37e4e2fcbf248f9224997 464 PIRSF PIRSF018788 2 461 9.2E-241 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM474_RS09990 c209bb3b42e37e4e2fcbf248f9224997 464 Gene3D G3DSA:2.30.170.30 2 54 2.2E-24 T 29-03-2018 AM474_RS09990 c209bb3b42e37e4e2fcbf248f9224997 464 Gene3D G3DSA:3.20.20.70 144 451 6.4E-163 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS09990 c209bb3b42e37e4e2fcbf248f9224997 464 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 13 442 3.8E-220 T 29-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 Pfam PF13186 Iron-sulfur cluster-binding domain 249 314 1.0E-7 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 381 197.953 T 29-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 Pfam PF13353 4Fe-4S single cluster domain 23 106 2.4E-6 T 29-03-2018 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 SUPERFAMILY SSF102114 14 323 7.46E-76 T 29-03-2018 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 PIRSF PIRSF037420 2 361 6.4E-128 T 29-03-2018 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 257 341 1.9E-8 T 29-03-2018 IPR023885 4Fe4S-binding SPASM domain AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 Gene3D G3DSA:3.20.20.70 14 319 3.6E-47 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 11 371 5.5E-189 T 29-03-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 Pfam PF04055 Radical SAM superfamily 22 177 1.4E-22 T 29-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 29-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 AM474_RS29260 74ae3cde34b21aa090ee3a5d5b007dd1 381 SMART SM00729 16 219 8.5E-5 T 29-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AM474_RS16275 679236e0a55e1cf243f30e25699068fd 855 Pfam PF11739 Dicarboxylate transport 634 839 7.8E-60 T 29-03-2018 IPR021730 Dicarboxylate transport AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 SUPERFAMILY SSF46894 163 236 2.48E-17 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.4E-9 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 Gene3D G3DSA:1.10.10.10 168 237 3.3E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 SUPERFAMILY SSF75516 4 166 1.44E-41 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 Gene3D G3DSA:3.30.450.80 1 167 1.4E-40 T 29-03-2018 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 175 230 7.2E-16 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 Pfam PF03472 Autoinducer binding domain 17 158 1.5E-36 T 29-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AM474_RS28790 ec99ef81dc7a9d4be5fb76c15ff52681 237 SMART SM00421 173 230 4.5E-15 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS04380 77b82c1012c83bb30447eb2e43dd1322 467 SUPERFAMILY SSF48695 231 271 1.93E-5 T 29-03-2018 IPR011031 Multihaem cytochrome AM474_RS04380 77b82c1012c83bb30447eb2e43dd1322 467 SUPERFAMILY SSF48695 373 383 1.93E-5 T 29-03-2018 IPR011031 Multihaem cytochrome AM474_RS04380 77b82c1012c83bb30447eb2e43dd1322 467 Gene3D G3DSA:1.10.760.10 201 321 0.0025 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS04380 77b82c1012c83bb30447eb2e43dd1322 467 Gene3D G3DSA:1.10.760.10 341 467 4.1E-25 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS04380 77b82c1012c83bb30447eb2e43dd1322 467 SUPERFAMILY SSF46626 345 467 1.83E-23 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS15300 289cc62501fca510e84963380de3a661 211 PIRSF PIRSF001488 1 209 1.2E-77 T 29-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL AM474_RS15300 289cc62501fca510e84963380de3a661 211 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS15300 289cc62501fca510e84963380de3a661 211 Gene3D G3DSA:3.40.30.10 20 205 3.4E-40 T 29-03-2018 AM474_RS15300 289cc62501fca510e84963380de3a661 211 Pfam PF01323 DSBA-like thioredoxin domain 96 182 4.0E-15 T 29-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 AM474_RS15300 289cc62501fca510e84963380de3a661 211 SUPERFAMILY SSF52833 25 203 4.03E-45 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS05585 35423628047c5795295414fbf817195b 103 SUPERFAMILY SSF47413 49 98 9.92E-12 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS05585 35423628047c5795295414fbf817195b 103 Pfam PF01381 Helix-turn-helix 51 99 3.4E-13 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS05585 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:3.40.1620.10 2 26 0.0022 T 29-03-2018 AM474_RS05585 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:1.10.10.60 27 61 9.7E-4 T 29-03-2018 AM474_RS05585 35423628047c5795295414fbf817195b 103 Gene3D G3DSA:1.10.260.40 62 101 2.6E-13 T 29-03-2018 AM474_RS05585 35423628047c5795295414fbf817195b 103 SMART SM00530 49 103 1.0E-9 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS31280 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 155 375 3.4E-38 T 29-03-2018 AM474_RS31280 b8268329f6f0aead27643248b137dada 436 SUPERFAMILY SSF53850 25 408 5.69E-73 T 29-03-2018 AM474_RS31280 b8268329f6f0aead27643248b137dada 436 Gene3D G3DSA:3.40.190.10 4 154 4.0E-19 T 29-03-2018 AM474_RS31280 b8268329f6f0aead27643248b137dada 436 Pfam PF01547 Bacterial extracellular solute-binding protein 46 327 3.4E-47 T 29-03-2018 IPR006059 Solute-binding family 1 GO:0006810 AM474_RS20375 3f44b7555f47d41e72cdb3393e1ee09c 397 Pfam PF12704 MacB-like periplasmic core domain 25 239 2.7E-21 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM474_RS20375 3f44b7555f47d41e72cdb3393e1ee09c 397 Gene3D G3DSA:1.20.1250.20 14 382 1.7E-5 T 29-03-2018 AM474_RS20375 3f44b7555f47d41e72cdb3393e1ee09c 397 Pfam PF02687 FtsX-like permease family 302 390 2.6E-10 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM474_RS14660 f5860aed3d8b39563773aca1c9dd6119 75 Pfam PF06649 Protein of unknown function (DUF1161) 25 74 2.5E-24 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM474_RS14660 f5860aed3d8b39563773aca1c9dd6119 75 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 3 75 3.0E-35 T 29-03-2018 IPR010595 Protein of unknown function DUF1161 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 SUPERFAMILY SSF51690 122 397 4.51E-91 T 29-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 SUPERFAMILY SSF54675 5 139 5.3E-42 T 29-03-2018 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 171 398 1.9E-88 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 399 51.159 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 Gene3D G3DSA:3.20.140.10 4 399 1.1E-104 T 29-03-2018 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 PIRSF PIRSF000484 1 383 4.0E-65 T 29-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 AM474_RS18605 c19413cae5d527eeba13a6bad10a1750 399 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 398 9.0E-155 T 29-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 2.3E-152 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 Pfam PF01235 Sodium:alanine symporter family 53 448 1.9E-160 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 210 229 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 406 426 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 345 367 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 182 200 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 91 113 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS07565 25e7bd0908dec60807b7b23ca29e5615 471 PRINTS PR00175 Sodium/alanine symporter signature 303 321 9.2E-59 T 29-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM474_RS28770 69f7c17b8834f2c6aa40b3f3bbb54264 230 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 133 219 5.5E-10 T 29-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AM474_RS28770 69f7c17b8834f2c6aa40b3f3bbb54264 230 Gene3D G3DSA:2.60.120.620 52 230 1.6E-19 T 29-03-2018 AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 Pfam PF03466 LysR substrate binding domain 88 289 3.0E-45 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 Gene3D G3DSA:3.40.190.10 89 173 1.0E-11 T 29-03-2018 AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 Gene3D G3DSA:1.10.10.10 3 84 4.7E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 SUPERFAMILY SSF46785 5 87 1.87E-20 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 2.4E-18 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 SUPERFAMILY SSF53850 90 291 4.16E-46 T 29-03-2018 AM474_RS31190 6e1dcb6ce5a89db5d6087c0081f1412e 297 Gene3D G3DSA:3.40.190.10 174 261 1.0E-24 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82693 142 187 3.92E-15 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82693 273 328 3.92E-15 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 9.3E-18 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 9.3E-18 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.3E-18 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 9.3E-18 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.3E-18 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:3.30.70.1430 558 660 4.4E-14 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:3.30.70.1430 45 149 1.0E-23 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:1.20.1640.10 822 1014 1.8E-31 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82714 710 795 2.22E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82693 557 645 7.15E-6 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82714 190 271 5.1E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 8.7E-147 T 29-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:1.20.1640.10 299 503 3.3E-34 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82866 795 1016 1.24E-40 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82693 45 139 1.22E-14 T 29-03-2018 AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:3.30.2090.10 708 798 1.6E-13 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 Gene3D G3DSA:3.30.2090.10 186 272 5.1E-16 T 29-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM474_RS25940 bd4eb2a88ca4a67424944826fb72856e 1029 SUPERFAMILY SSF82866 298 493 1.1E-36 T 29-03-2018 AM474_RS22925 e0ab4b09eb55b31d866093c3c22e56fc 389 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 207 2.2E-45 T 29-03-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal AM474_RS22925 e0ab4b09eb55b31d866093c3c22e56fc 389 Gene3D G3DSA:2.70.50.50 26 210 1.3E-62 T 29-03-2018 AM474_RS22925 e0ab4b09eb55b31d866093c3c22e56fc 389 Gene3D G3DSA:2.10.10.20 337 389 9.7E-4 T 29-03-2018 AM474_RS22925 e0ab4b09eb55b31d866093c3c22e56fc 389 SUPERFAMILY SSF81296 26 210 1.01E-54 T 29-03-2018 IPR014756 Immunoglobulin E-set AM474_RS27900 ae939ccde6b9b2fa955444aa7c084380 295 Pfam PF03547 Membrane transport protein 134 285 2.5E-14 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM474_RS09925 4257ac29872cab3768e9217564ed9b58 437 Pfam PF01569 PAP2 superfamily 285 397 5.0E-21 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS09925 4257ac29872cab3768e9217564ed9b58 437 Gene3D G3DSA:1.20.144.10 230 404 2.7E-29 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS09925 4257ac29872cab3768e9217564ed9b58 437 SMART SM00014 281 391 5.4E-16 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS09925 4257ac29872cab3768e9217564ed9b58 437 SUPERFAMILY SSF48317 207 418 1.96E-44 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS09925 4257ac29872cab3768e9217564ed9b58 437 Pfam PF09335 SNARE associated Golgi protein 37 160 2.6E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS01910 139e2f26923ac1568950eb073ccb3e00 337 PIRSF PIRSF029120 3 336 4.3E-87 T 29-03-2018 IPR011226 ATP-grasp family AM474_RS01910 139e2f26923ac1568950eb073ccb3e00 337 Pfam PF15632 ATP-grasp in the biosynthetic pathway with Ter operon 7 333 7.6E-102 T 29-03-2018 IPR011226 ATP-grasp family AM474_RS01910 139e2f26923ac1568950eb073ccb3e00 337 Gene3D G3DSA:3.30.470.20 108 336 2.4E-25 T 29-03-2018 AM474_RS01910 139e2f26923ac1568950eb073ccb3e00 337 SUPERFAMILY SSF56059 113 316 2.65E-21 T 29-03-2018 AM474_RS11670 d8f99861a3429e5a4e910672b8d4c49b 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 34.651 T 29-03-2018 IPR023065 Uncharacterised protein family ApaG AM474_RS11670 d8f99861a3429e5a4e910672b8d4c49b 126 Gene3D G3DSA:2.60.40.1470 1 126 1.9E-45 T 29-03-2018 IPR007474 ApaG domain AM474_RS11670 d8f99861a3429e5a4e910672b8d4c49b 126 Pfam PF04379 ApaG domain 18 102 6.3E-36 T 29-03-2018 IPR007474 ApaG domain AM474_RS11670 d8f99861a3429e5a4e910672b8d4c49b 126 SUPERFAMILY SSF110069 4 126 3.01E-50 T 29-03-2018 IPR007474 ApaG domain AM474_RS12795 e0bbd7434033d17551dcd0fd6beb440c 448 Gene3D G3DSA:2.50.20.10 156 445 1.8E-51 T 29-03-2018 AM474_RS12795 e0bbd7434033d17551dcd0fd6beb440c 448 Pfam PF07044 Protein of unknown function (DUF1329) 82 444 1.4E-138 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS17365 692f72fe92ca29aaad21b6071ca0255d 265 SUPERFAMILY SSF53850 55 221 1.63E-8 T 29-03-2018 AM474_RS17365 692f72fe92ca29aaad21b6071ca0255d 265 Gene3D G3DSA:3.40.190.10 91 197 1.2E-9 T 29-03-2018 AM474_RS17365 692f72fe92ca29aaad21b6071ca0255d 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 55 245 3.9E-15 T 29-03-2018 AM474_RS30800 6c4ec2d32234735f00657b355550343b 402 Pfam PF13579 Glycosyl transferase 4-like domain 16 206 1.4E-24 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS30800 6c4ec2d32234735f00657b355550343b 402 Gene3D G3DSA:3.40.50.2000 226 386 3.2E-21 T 29-03-2018 AM474_RS30800 6c4ec2d32234735f00657b355550343b 402 SUPERFAMILY SSF53756 1 395 6.98E-49 T 29-03-2018 AM474_RS30800 6c4ec2d32234735f00657b355550343b 402 Gene3D G3DSA:3.40.50.2000 7 225 7.4E-14 T 29-03-2018 AM474_RS30800 6c4ec2d32234735f00657b355550343b 402 Pfam PF13692 Glycosyl transferases group 1 222 359 5.2E-20 T 29-03-2018 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 SUPERFAMILY SSF88659 117 174 1.18E-11 T 29-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 SUPERFAMILY SSF88946 27 87 3.49E-5 T 29-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 Pfam PF08281 Sigma-70, region 4 122 173 3.7E-12 T 29-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 Pfam PF04542 Sigma-70 region 2 29 88 1.3E-4 T 29-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 173 2.3E-12 T 29-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 Gene3D G3DSA:1.10.1740.10 27 94 5.8E-6 T 29-03-2018 AM474_RS01470 2196bb27585f6c7942a0bd21f86cd2db 179 Gene3D G3DSA:1.10.10.10 114 174 3.3E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04410 212c544d287f7bafce0a4d924f35e74d 421 Pfam PF03573 outer membrane porin, OprD family 28 419 7.4E-166 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS04410 212c544d287f7bafce0a4d924f35e74d 421 Gene3D G3DSA:2.40.160.10 1 421 8.2E-134 T 29-03-2018 AM474_RS20150 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 Pfam PF02586 SOS response associated peptidase (SRAP) 1 191 1.2E-33 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM474_RS20150 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 Gene3D G3DSA:3.90.1680.10 1 204 9.7E-43 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM474_RS20150 62a7bfc1ade7f8c3f89021b3b93c1cd7 204 SUPERFAMILY SSF143081 3 199 1.05E-43 T 29-03-2018 IPR003738 SOS response associated peptidase (SRAP) AM474_RS18215 106d4d26ac544b085948b78784428868 391 Gene3D G3DSA:3.50.50.60 6 329 8.6E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18215 106d4d26ac544b085948b78784428868 391 Pfam PF01266 FAD dependent oxidoreductase 8 314 2.3E-19 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS18215 106d4d26ac544b085948b78784428868 391 SUPERFAMILY SSF51905 7 222 5.83E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS18215 106d4d26ac544b085948b78784428868 391 SUPERFAMILY SSF51905 252 289 5.83E-21 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 Pfam PF07690 Major Facilitator Superfamily 17 270 1.4E-16 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 SUPERFAMILY SSF103473 12 401 1.07E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 Gene3D G3DSA:1.20.1250.20 10 201 2.3E-22 T 29-03-2018 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.5E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 PRINTS PR01035 Tetracycline resistance protein signature 318 338 1.5E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 PRINTS PR01035 Tetracycline resistance protein signature 50 69 1.5E-5 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS13050 27a78f7bc8328d3d0797aa276f5c2b82 413 Gene3D G3DSA:1.20.1250.20 211 408 1.7E-10 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 Pfam PF00691 OmpA family 178 273 7.4E-19 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS06955 1681538648886e370c2786f3261a0b48 321 SUPERFAMILY SSF103088 149 278 4.58E-30 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS06955 1681538648886e370c2786f3261a0b48 321 Gene3D G3DSA:3.30.1330.60 91 304 1.8E-30 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 242 261 3.9E-20 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 77 95 3.9E-20 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 224 241 3.9E-20 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 39 57 3.9E-20 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 116 138 3.9E-20 T 29-03-2018 AM474_RS06955 1681538648886e370c2786f3261a0b48 321 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 262 282 3.9E-20 T 29-03-2018 AM474_RS15520 2017d48f929be9d08d9529105c6ef5a8 381 SUPERFAMILY SSF53756 1 368 4.32E-74 T 29-03-2018 AM474_RS15520 2017d48f929be9d08d9529105c6ef5a8 381 Pfam PF13439 Glycosyltransferase Family 4 15 173 6.8E-15 T 29-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 AM474_RS15520 2017d48f929be9d08d9529105c6ef5a8 381 Pfam PF00534 Glycosyl transferases group 1 189 345 2.1E-32 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS15520 2017d48f929be9d08d9529105c6ef5a8 381 Gene3D G3DSA:3.40.50.2000 14 184 1.0E-5 T 29-03-2018 AM474_RS15520 2017d48f929be9d08d9529105c6ef5a8 381 Gene3D G3DSA:3.40.50.2000 185 351 2.8E-37 T 29-03-2018 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 Gene3D G3DSA:3.40.50.1820 3 298 2.7E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 Pfam PF00561 alpha/beta hydrolase fold 31 145 1.5E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 PRINTS PR00412 Epoxide hydrolase signature 269 291 1.5E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 PRINTS PR00412 Epoxide hydrolase signature 37 55 1.5E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.5E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 PRINTS PR00412 Epoxide hydrolase signature 117 130 1.5E-7 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS29765 cb880d902d526377954a1c4b2421f2f8 300 SUPERFAMILY SSF53474 4 295 2.91E-64 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 1.3E-13 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 1.3E-13 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 1.3E-13 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 1.3E-13 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 Pfam PF00482 Type II secretion system (T2SS), protein F 266 385 8.0E-22 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS01230 e32c366ca585fff1312652f5e0daa8b1 395 Pfam PF00482 Type II secretion system (T2SS), protein F 63 185 4.3E-28 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS21270 63b79d749b4984934213dca7b0cb438d 604 Gene3D G3DSA:3.40.50.2300 249 430 1.7E-20 T 29-03-2018 AM474_RS21270 63b79d749b4984934213dca7b0cb438d 604 Gene3D G3DSA:3.40.50.2300 431 587 4.8E-23 T 29-03-2018 AM474_RS21270 63b79d749b4984934213dca7b0cb438d 604 SUPERFAMILY SSF53822 251 419 2.75E-82 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS21270 63b79d749b4984934213dca7b0cb438d 604 SUPERFAMILY SSF53822 447 599 2.75E-82 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS21270 63b79d749b4984934213dca7b0cb438d 604 Pfam PF04348 LppC putative lipoprotein 33 594 2.3E-221 T 29-03-2018 IPR007443 Penicillin-binding protein activator LpoA AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 SUPERFAMILY SSF47188 1 125 5.89E-32 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 Hamap MF_00556 Bacteriohemerythrin. 3 125 24.613 T 29-03-2018 IPR023504 Bacteriohemerythrin-like protein AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 Pfam PF01814 Hemerythrin HHE cation binding domain 13 125 5.9E-14 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 29-03-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 6 125 1.3E-35 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AM474_RS27580 99ae7ea37c9644ba7773854b4c2ce082 153 Gene3D G3DSA:1.20.120.50 1 127 1.6E-34 T 29-03-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 AM474_RS21920 a176cbfb5273ebbd19ccffc4e4fde840 245 SUPERFAMILY SSF48452 53 202 3.45E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS21920 a176cbfb5273ebbd19ccffc4e4fde840 245 PIRSF PIRSF029658 1 245 6.6E-74 T 29-03-2018 IPR016931 Uncharacterised conserved protein UCP029658, TPR AM474_RS21920 a176cbfb5273ebbd19ccffc4e4fde840 245 Gene3D G3DSA:1.25.40.10 43 214 2.3E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS27225 98c8393825506dc495d9f23416708f3c 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 4.6E-98 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS27225 98c8393825506dc495d9f23416708f3c 171 Gene3D G3DSA:3.10.129.10 1 171 6.5E-51 T 29-03-2018 AM474_RS27225 98c8393825506dc495d9f23416708f3c 171 SUPERFAMILY SSF54637 2 168 4.97E-58 T 29-03-2018 IPR029069 HotDog domain AM474_RS27225 98c8393825506dc495d9f23416708f3c 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 51.643 T 29-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS27225 98c8393825506dc495d9f23416708f3c 171 Pfam PF07977 FabA-like domain 28 158 1.3E-52 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS05760 eb3d81cd93b42f914f44e0e0c148cdef 893 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 278 422 4.7E-16 T 29-03-2018 IPR018712 Domain of unknown function DUF2235 AM474_RS05760 eb3d81cd93b42f914f44e0e0c148cdef 893 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 78 262 1.8E-8 T 29-03-2018 IPR018712 Domain of unknown function DUF2235 AM474_RS29850 c9353f71935174caa31b4b84f2cb8e28 313 SUPERFAMILY SSF50891 200 294 6.07E-6 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS29850 c9353f71935174caa31b4b84f2cb8e28 313 SMART SM00797 30 311 1.9E-119 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS29850 c9353f71935174caa31b4b84f2cb8e28 313 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 31 292 3.5E-74 T 29-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B AM474_RS00315 913de441f95b042f5f74fb17330dc2b7 284 Gene3D G3DSA:3.90.850.10 48 284 9.9E-64 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00315 913de441f95b042f5f74fb17330dc2b7 284 Pfam PF10370 Domain of unknown function (DUF2437) 1 65 1.6E-5 T 29-03-2018 IPR018833 Domain of unknown function DUF2437 AM474_RS00315 913de441f95b042f5f74fb17330dc2b7 284 SUPERFAMILY SSF56529 59 278 1.18E-63 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS00315 913de441f95b042f5f74fb17330dc2b7 284 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 1.1E-53 T 29-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 TIGRFAM TIGR00861 MIP: MIP family channel proteins 16 252 6.4E-68 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 Pfam PF00230 Major intrinsic protein 9 251 9.6E-66 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 ProSitePatterns PS00221 MIP family signature. 69 77 - T 29-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 SUPERFAMILY SSF81338 10 260 5.49E-78 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 Gene3D G3DSA:1.20.1080.10 4 262 4.4E-79 T 29-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 51 75 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 154 172 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 187 209 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 12 31 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 237 257 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS07250 804d987aec6e423920bf04a6f666297a 279 PRINTS PR00783 Major intrinsic protein family signature 88 107 1.1E-49 T 29-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 AM474_RS01665 86c16257453cb7f1c98f45481c39796e 95 Pfam PF12021 Protein of unknown function (DUF3509) 4 87 1.8E-32 T 29-03-2018 IPR021898 Protein of unknown function DUF3509 AM474_RS10890 de7a64c24ece364cc0a5f73a3925f72f 487 Pfam PF02321 Outer membrane efflux protein 285 464 3.0E-21 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS10890 de7a64c24ece364cc0a5f73a3925f72f 487 Pfam PF02321 Outer membrane efflux protein 68 253 1.8E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS10890 de7a64c24ece364cc0a5f73a3925f72f 487 SUPERFAMILY SSF56954 5 466 1.83E-94 T 29-03-2018 AM474_RS10890 de7a64c24ece364cc0a5f73a3925f72f 487 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 466 1.3E-94 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS10890 de7a64c24ece364cc0a5f73a3925f72f 487 Gene3D G3DSA:1.20.1600.10 24 468 4.3E-91 T 29-03-2018 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PIRSF PIRSF006060 320 414 4.8 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PIRSF PIRSF006060 3 310 2.3E-11 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 17 398 3.4E-150 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 Pfam PF03222 Tryptophan/tyrosine permease family 12 405 1.6E-146 T 29-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 20 43 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 92 112 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 330 348 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 296 315 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 158 178 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 196 218 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 235 254 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 47 66 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS15595 71a717a4eae10c407e3415830ef4b01e 417 PRINTS PR00166 Aromatic amino acid permease signature 351 370 3.9E-99 T 29-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 AM474_RS13060 b81e78158b88fb19b218d22bf88c1628 423 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 192 5.8E-9 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS13060 b81e78158b88fb19b218d22bf88c1628 423 Gene3D G3DSA:3.40.50.720 1 302 2.6E-34 T 29-03-2018 AM474_RS13060 b81e78158b88fb19b218d22bf88c1628 423 Pfam PF13781 DoxX-like family 308 409 1.6E-23 T 29-03-2018 IPR025695 DoxX-like family AM474_RS13060 b81e78158b88fb19b218d22bf88c1628 423 SUPERFAMILY SSF51735 1 259 3.03E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10515 ba5da04e561b039d4c8813459d4ca84b 162 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 159 1.1E-38 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AM474_RS10515 ba5da04e561b039d4c8813459d4ca84b 162 PIRSF PIRSF030820 1 162 4.5E-62 T 29-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 AM474_RS00090 cf824ca01cc5e5cc6d6b1754b1d7d7cc 180 Pfam PF16304 Domain of unknown function (DUF4946) 26 179 6.6E-65 T 29-03-2018 IPR032543 Protein of unknown function DUF4946 AM474_RS00090 cf824ca01cc5e5cc6d6b1754b1d7d7cc 180 Gene3D G3DSA:3.40.1000.10 21 180 7.1E-4 T 29-03-2018 AM474_RS03305 4a712ca95bb158dc4af57416af43ae96 163 Gene3D G3DSA:1.10.10.10 18 149 2.5E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03305 4a712ca95bb158dc4af57416af43ae96 163 SMART SM00347 40 143 1.5E-13 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS03305 4a712ca95bb158dc4af57416af43ae96 163 SUPERFAMILY SSF46785 15 155 3.54E-29 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03305 4a712ca95bb158dc4af57416af43ae96 163 Pfam PF01047 MarR family 47 110 3.5E-11 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 209 1.2E-88 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 Gene3D G3DSA:3.40.30.10 1 97 8.0E-28 T 29-03-2018 AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 Gene3D G3DSA:1.20.1050.10 98 212 4.1E-24 T 29-03-2018 AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 SUPERFAMILY SSF52833 1 92 6.73E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 Pfam PF13410 Glutathione S-transferase, C-terminal domain 138 196 1.3E-6 T 29-03-2018 AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 SUPERFAMILY SSF47616 84 210 5.99E-29 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS29350 f58e31a5e05fdbd60364db992e134410 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 82 1.6E-17 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS06110 725e6d74514eaee4a412dab2c92a3aea 203 SUPERFAMILY SSF53448 16 200 1.13E-26 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS06110 725e6d74514eaee4a412dab2c92a3aea 203 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 45 159 4.5E-29 T 29-03-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated AM474_RS06110 725e6d74514eaee4a412dab2c92a3aea 203 Gene3D G3DSA:3.90.550.10 22 186 6.7E-14 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS06110 725e6d74514eaee4a412dab2c92a3aea 203 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 8 193 2.0E-40 T 29-03-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated AM474_RS05520 9e3edf50dc2a9226b1c355990effc9ee 183 Pfam PF13302 Acetyltransferase (GNAT) domain 20 150 8.7E-19 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS05520 9e3edf50dc2a9226b1c355990effc9ee 183 Gene3D G3DSA:3.40.630.30 6 182 2.3E-25 T 29-03-2018 AM474_RS05520 9e3edf50dc2a9226b1c355990effc9ee 183 SUPERFAMILY SSF55729 5 174 1.23E-37 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS09945 d62c52b732e804be69728c5a214be916 151 SUPERFAMILY SSF54637 9 146 5.08E-37 T 29-03-2018 IPR029069 HotDog domain AM474_RS09945 d62c52b732e804be69728c5a214be916 151 Gene3D G3DSA:3.10.129.10 2 151 2.5E-32 T 29-03-2018 AM474_RS09945 d62c52b732e804be69728c5a214be916 151 Pfam PF01575 MaoC like domain 13 116 8.2E-26 T 29-03-2018 IPR002539 MaoC-like domain AM474_RS06285 740062ae963038aed0a7a06e2cd0f728 264 Gene3D G3DSA:1.10.3720.10 17 263 3.3E-29 T 29-03-2018 AM474_RS06285 740062ae963038aed0a7a06e2cd0f728 264 SUPERFAMILY SSF161098 67 258 1.13E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06285 740062ae963038aed0a7a06e2cd0f728 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 263 7.1E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06285 740062ae963038aed0a7a06e2cd0f728 264 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 263 1.5E-92 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 9.8E-48 T 29-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 78 89 2.4E-14 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.4E-14 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 51 60 2.4E-14 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 Pfam PF00117 Glutamine amidotransferase class-I 5 186 9.8E-45 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 94 6.2E-8 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 48 62 6.2E-8 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 Gene3D G3DSA:3.40.50.880 1 192 2.5E-49 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 SUPERFAMILY SSF52317 1 189 1.83E-47 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.4E-32 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.4E-32 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 51 60 2.4E-32 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 123 135 2.4E-32 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 78 89 2.4E-32 T 29-03-2018 AM474_RS23850 5cda5919292ece316a2690d35f4b8600 200 PRINTS PR00097 Anthranilate synthase component II signature 103 111 2.4E-32 T 29-03-2018 AM474_RS21200 9cb7fd31b0800587fd887823378b397d 320 Gene3D G3DSA:1.25.40.10 82 314 9.4E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS25385 6bf2c5c8fa7e1d53041896db6b3eec60 300 SUPERFAMILY SSF103481 50 147 1.96E-11 T 29-03-2018 AM474_RS25385 6bf2c5c8fa7e1d53041896db6b3eec60 300 SUPERFAMILY SSF103481 214 298 4.18E-8 T 29-03-2018 AM474_RS25385 6bf2c5c8fa7e1d53041896db6b3eec60 300 Pfam PF00892 EamA-like transporter family 22 146 5.6E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS25385 6bf2c5c8fa7e1d53041896db6b3eec60 300 Pfam PF00892 EamA-like transporter family 162 294 2.8E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS01315 2a0a527696c2ec8817989b3be5885bb2 166 Gene3D G3DSA:3.10.129.10 1 151 4.7E-48 T 29-03-2018 AM474_RS01315 2a0a527696c2ec8817989b3be5885bb2 166 Pfam PF03061 Thioesterase superfamily 23 95 1.8E-17 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS01315 2a0a527696c2ec8817989b3be5885bb2 166 SUPERFAMILY SSF54637 5 156 9.1E-45 T 29-03-2018 IPR029069 HotDog domain AM474_RS16770 a2f6744c59b397f77c6ed6e71cab90fe 109 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 100 5.9E-34 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS16770 a2f6744c59b397f77c6ed6e71cab90fe 109 Pfam PF09498 Protein of unknown function (DUF2388) 31 100 3.2E-32 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS10945 41da8bbe337608305f290f0954211273 414 Gene3D G3DSA:1.20.1250.20 210 412 3.6E-10 T 29-03-2018 AM474_RS10945 41da8bbe337608305f290f0954211273 414 Pfam PF13000 Acetyl-coenzyme A transporter 1 14 93 1.6E-19 T 29-03-2018 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 Reactome: R-HSA-425397 AM474_RS10945 41da8bbe337608305f290f0954211273 414 SUPERFAMILY SSF103473 5 399 3.27E-30 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10945 41da8bbe337608305f290f0954211273 414 Gene3D G3DSA:1.20.1250.20 1 198 2.1E-15 T 29-03-2018 AM474_RS10945 41da8bbe337608305f290f0954211273 414 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 9 398 7.8E-208 T 29-03-2018 IPR014090 Siderophore transporter, RhtX/FptX family AM474_RS06005 12c7720a30e28de54656955779d0fb81 79 SUPERFAMILY SSF47336 3 77 3.01E-13 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS06005 12c7720a30e28de54656955779d0fb81 79 Gene3D G3DSA:1.10.1200.10 2 79 1.8E-14 T 29-03-2018 AM474_RS06005 12c7720a30e28de54656955779d0fb81 79 Pfam PF00550 Phosphopantetheine attachment site 9 72 1.1E-7 T 29-03-2018 IPR009081 Phosphopantetheine binding ACP domain AM474_RS01500 1b923f9c200bd0edd765708de00a0bea 212 Pfam PF13353 4Fe-4S single cluster domain 16 144 9.2E-23 T 29-03-2018 AM474_RS01500 1b923f9c200bd0edd765708de00a0bea 212 SUPERFAMILY SSF102114 26 113 5.69E-6 T 29-03-2018 AM474_RS01500 1b923f9c200bd0edd765708de00a0bea 212 Gene3D G3DSA:3.20.20.70 25 156 4.5E-9 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS18815 5401c63ffa02ff3b0058ade8276d89e4 135 Pfam PF07498 Rho termination factor, N-terminal domain 102 133 1.1E-7 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM474_RS18815 5401c63ffa02ff3b0058ade8276d89e4 135 Gene3D G3DSA:1.10.720.10 98 135 3.6E-11 T 29-03-2018 AM474_RS18815 5401c63ffa02ff3b0058ade8276d89e4 135 SUPERFAMILY SSF68912 100 133 5.89E-5 T 29-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM474_RS20040 9e91c467c2e1334779d8898da4209666 457 Pfam PF07690 Major Facilitator Superfamily 21 381 2.1E-45 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS20040 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 228 438 1.0E-19 T 29-03-2018 AM474_RS20040 9e91c467c2e1334779d8898da4209666 457 Gene3D G3DSA:1.20.1250.20 10 214 2.6E-31 T 29-03-2018 AM474_RS20040 9e91c467c2e1334779d8898da4209666 457 SUPERFAMILY SSF103473 9 436 6.15E-64 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS01440 49e8b4b5e975518c0fbe7ad131485f4d 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 338 3.7E-49 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS01440 49e8b4b5e975518c0fbe7ad131485f4d 411 Gene3D G3DSA:3.20.20.70 1 367 4.4E-112 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS01440 49e8b4b5e975518c0fbe7ad131485f4d 411 SUPERFAMILY SSF51395 2 348 1.18E-102 T 29-03-2018 AM474_RS16255 5a41c10a4e06ca649e17caf0f6640590 387 SUPERFAMILY SSF103473 3 369 1.7E-37 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS16255 5a41c10a4e06ca649e17caf0f6640590 387 Pfam PF07690 Major Facilitator Superfamily 11 238 2.2E-14 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS16255 5a41c10a4e06ca649e17caf0f6640590 387 Gene3D G3DSA:1.20.1250.20 195 375 8.5E-14 T 29-03-2018 AM474_RS16255 5a41c10a4e06ca649e17caf0f6640590 387 Gene3D G3DSA:1.20.1250.20 1 177 6.5E-16 T 29-03-2018 AM474_RS19475 69531ab9627fcc8148a496ee600c1943 207 Pfam PF01728 FtsJ-like methyltransferase 28 204 2.0E-56 T 29-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM474_RS19475 69531ab9627fcc8148a496ee600c1943 207 PIRSF PIRSF005461 1 207 1.6E-80 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM474_RS19475 69531ab9627fcc8148a496ee600c1943 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 12 205 30.614 T 29-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 AM474_RS19475 69531ab9627fcc8148a496ee600c1943 207 Gene3D G3DSA:3.40.50.150 1 207 1.3E-56 T 29-03-2018 AM474_RS19475 69531ab9627fcc8148a496ee600c1943 207 SUPERFAMILY SSF53335 27 205 6.1E-43 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02240 d49bdb466b3d0c1147e5b0e325d10ae3 115 Pfam PF09498 Protein of unknown function (DUF2388) 50 109 3.3E-12 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS25520 448a9d67c93fdbc745d2acbc6eda5979 279 Gene3D G3DSA:3.40.50.1820 5 276 4.9E-22 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25520 448a9d67c93fdbc745d2acbc6eda5979 279 PIRSF PIRSF037442 1 279 6.0E-77 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AM474_RS25520 448a9d67c93fdbc745d2acbc6eda5979 279 Pfam PF12697 Alpha/beta hydrolase family 37 263 5.7E-10 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS25520 448a9d67c93fdbc745d2acbc6eda5979 279 SUPERFAMILY SSF53474 5 275 4.23E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15500 edc540381de5edd97f110cf426d5b898 265 Pfam PF01061 ABC-2 type transporter 20 225 8.1E-29 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM474_RS15500 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 35 56 4.6E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS15500 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 4.6E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS15500 edc540381de5edd97f110cf426d5b898 265 PRINTS PR00164 ABC-2 type transport system membrane protein signature 146 170 4.6E-6 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS16355 807a955b1a1451be2f5b628f8e89f3bb 668 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 22 503 4.2E-200 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS16355 807a955b1a1451be2f5b628f8e89f3bb 668 ProSitePatterns PS01303 BCCT family of transporters signature. 322 331 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS16355 807a955b1a1451be2f5b628f8e89f3bb 668 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 60 504 2.3E-163 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS08890 59a7228d915e6b20ecc57cfb6f4832ec 296 Gene3D G3DSA:1.10.3470.10 1 290 1.2E-38 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS08890 59a7228d915e6b20ecc57cfb6f4832ec 296 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 2.5E-31 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS07380 621550d4bafd5908216eeb37154c45a4 308 SUPERFAMILY SSF103481 52 155 1.2E-8 T 29-03-2018 AM474_RS07380 621550d4bafd5908216eeb37154c45a4 308 SUPERFAMILY SSF103481 202 299 8.24E-12 T 29-03-2018 AM474_RS07380 621550d4bafd5908216eeb37154c45a4 308 Pfam PF00892 EamA-like transporter family 19 152 7.4E-18 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS07380 621550d4bafd5908216eeb37154c45a4 308 Pfam PF00892 EamA-like transporter family 161 293 1.7E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS31870 9ed0a1ee3d9421fd3170aba0d62aba64 283 Pfam PF13649 Methyltransferase domain 55 151 3.7E-11 T 29-03-2018 AM474_RS31870 9ed0a1ee3d9421fd3170aba0d62aba64 283 SUPERFAMILY SSF53335 31 248 3.98E-31 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS31870 9ed0a1ee3d9421fd3170aba0d62aba64 283 Gene3D G3DSA:3.40.50.150 36 280 2.1E-25 T 29-03-2018 AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00267 239 411 1.1E-43 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 409 6.2E-29 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 SMART SM00052 421 667 2.8E-122 T 29-03-2018 IPR001633 EAL domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF141868 426 676 4.71E-93 T 29-03-2018 IPR001633 EAL domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 SUPERFAMILY SSF55073 255 411 2.2E-38 T 29-03-2018 IPR029787 Nucleotide cyclase AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.30.70.270 238 412 1.8E-48 T 29-03-2018 AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 Gene3D G3DSA:3.20.20.450 413 681 3.7E-102 T 29-03-2018 IPR001633 EAL domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 407 4.0E-38 T 29-03-2018 IPR000160 GGDEF domain AM474_RS21565 bea7401e252f6b02d578cdf6e60edaa0 687 Pfam PF00563 EAL domain 427 662 2.7E-75 T 29-03-2018 IPR001633 EAL domain AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 3.8E-19 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 SMART SM00421 150 207 1.1E-23 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 SMART SM00448 4 119 2.2E-19 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 SUPERFAMILY SSF52172 3 180 5.69E-26 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 Gene3D G3DSA:3.40.50.2300 1 124 5.2E-27 T 29-03-2018 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 Pfam PF00072 Response regulator receiver domain 6 120 8.0E-22 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 Gene3D G3DSA:1.10.10.10 125 217 1.9E-26 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS07375 97f2eabbbc87fc447916a662505090eb 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.5E-11 T 29-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AM474_RS13920 5b3c372cb533d77754f810470b6da396 126 Pfam PF09345 Domain of unknown function (DUF1987) 6 122 2.5E-39 T 29-03-2018 IPR018530 Domain of unknown function DUF1987 AM474_RS04320 918b206da732cd89b2299ce78b26080b 128 Pfam PF07007 Lysozyme inhibitor LprI 37 111 5.6E-14 T 29-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AM474_RS07585 a9c7790e5cafa0a47c4ae5cecdff8410 146 SUPERFAMILY SSF54637 1 142 3.67E-53 T 29-03-2018 IPR029069 HotDog domain AM474_RS07585 a9c7790e5cafa0a47c4ae5cecdff8410 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 4.7E-65 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS07585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 36.125 T 29-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS07585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Pfam PF07977 FabA-like domain 11 137 1.2E-38 T 29-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM474_RS07585 a9c7790e5cafa0a47c4ae5cecdff8410 146 Gene3D G3DSA:3.10.129.10 1 145 3.7E-57 T 29-03-2018 AM474_RS27455 f59f76de7127d694313029088580d81a 388 Pfam PF00155 Aminotransferase class I and II 51 375 2.8E-29 T 29-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM474_RS27455 f59f76de7127d694313029088580d81a 388 Gene3D G3DSA:3.40.640.10 42 284 5.9E-46 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS27455 f59f76de7127d694313029088580d81a 388 SUPERFAMILY SSF53383 2 381 3.8E-93 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS27455 f59f76de7127d694313029088580d81a 388 Gene3D G3DSA:3.90.1150.10 285 383 1.1E-30 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 Pfam PF02397 Bacterial sugar transferase 284 472 1.3E-67 T 29-03-2018 IPR003362 Bacterial sugar transferase AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 SUPERFAMILY SSF51735 151 267 3.46E-9 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 46 478 4.0E-148 T 29-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 Pfam PF13727 CoA-binding domain 70 248 1.1E-27 T 29-03-2018 AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 Gene3D G3DSA:3.40.50.720 150 271 1.3E-19 T 29-03-2018 AM474_RS30765 6abafe36a7138d962bdf7a8061468f66 478 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 34 477 1.3E-136 T 29-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AM474_RS21595 91edd6774f8b9cfeb803151ed8b58082 329 Gene3D G3DSA:3.40.50.720 1 328 9.4E-63 T 29-03-2018 AM474_RS21595 91edd6774f8b9cfeb803151ed8b58082 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 227 2.2E-33 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS21595 91edd6774f8b9cfeb803151ed8b58082 329 SUPERFAMILY SSF51735 1 263 1.33E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS21595 91edd6774f8b9cfeb803151ed8b58082 329 SUPERFAMILY SSF51735 293 327 1.33E-68 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 SUPERFAMILY SSF46689 191 242 6.53E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 26 179 9.7E-44 T 29-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 Gene3D G3DSA:1.10.10.60 191 246 1.0E-12 T 29-03-2018 AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 SUPERFAMILY SSF46689 244 291 3.67E-10 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 SMART SM00342 208 291 7.7E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 Pfam PF12833 Helix-turn-helix domain 214 289 8.9E-20 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS30995 0ab713f159fcd2baf4b1cea49a4e434c 296 Gene3D G3DSA:1.10.10.60 247 296 2.5E-12 T 29-03-2018 AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 Pfam PF00994 Probable molybdopterin binding domain 15 157 4.7E-34 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 PIRSF PIRSF006443 1 167 5.2E-66 T 29-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 SUPERFAMILY SSF53218 8 169 2.09E-47 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 29-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 SMART SM00852 15 159 6.2E-33 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 Gene3D G3DSA:3.40.980.10 4 173 3.2E-32 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 4.1E-86 T 29-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AM474_RS04360 094fb52c4eaa843f04ada84da052f0d6 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 1.7E-33 T 29-03-2018 IPR001453 MoaB/Mog domain AM474_RS10235 95cca77bf92ab98e001d481284ff3617 496 PIRSF PIRSF006060 1 488 2.1E-65 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS10235 95cca77bf92ab98e001d481284ff3617 496 Pfam PF13520 Amino acid permease 16 427 1.6E-31 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 29-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 SMART SM00490 262 343 1.8E-31 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 SMART SM00487 24 225 3.4E-54 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 Gene3D G3DSA:3.40.50.300 6 225 9.2E-57 T 29-03-2018 AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 Pfam PF00271 Helicase conserved C-terminal domain 238 343 1.4E-28 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 SUPERFAMILY SSF52540 78 360 5.48E-67 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 Pfam PF00270 DEAD/DEAH box helicase 29 192 2.0E-46 T 29-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM474_RS06735 4e6e01b735dd1ec6fe1a73f4a21ce984 446 Gene3D G3DSA:3.40.50.300 226 436 2.7E-44 T 29-03-2018 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 Pfam PF01197 Ribosomal protein L31 1 65 1.0E-30 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 SUPERFAMILY SSF143800 1 67 5.49E-28 T 29-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.851 T 29-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.0E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.0E-21 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-33 T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS17635 2728aa6aa959f51dfa169f7dfbbf72b1 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 29-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM474_RS26835 845a7143cf128ffbfd4f4c5561493ea2 122 SUPERFAMILY SSF103481 5 105 3.66E-16 T 29-03-2018 AM474_RS26835 845a7143cf128ffbfd4f4c5561493ea2 122 Pfam PF00893 Small Multidrug Resistance protein 3 93 2.4E-23 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS05395 4805642c5563889e2236c3fcf159ffc7 213 SUPERFAMILY SSF52218 1 199 1.19E-58 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05395 4805642c5563889e2236c3fcf159ffc7 213 Pfam PF02525 Flavodoxin-like fold 3 198 1.2E-49 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS05395 4805642c5563889e2236c3fcf159ffc7 213 Gene3D G3DSA:3.40.50.360 3 206 4.0E-45 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05395 4805642c5563889e2236c3fcf159ffc7 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.754 T 29-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 303 8.3E-87 T 29-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 147.251 T 29-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 SUPERFAMILY SSF56112 5 306 3.06E-68 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 Gene3D G3DSA:3.90.1200.10 105 315 4.0E-26 T 29-03-2018 AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 Pfam PF01636 Phosphotransferase enzyme family 28 254 1.2E-36 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS15270 b960b86bf818bcb29047131d2dd091d7 316 Gene3D G3DSA:3.30.200.20 1 102 8.4E-20 T 29-03-2018 AM474_RS22890 5d58a7de6d1326a2395c845b10756a68 670 Pfam PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal 29 501 5.4E-175 T 29-03-2018 IPR031329 Neutral/alkaline non-lysosomal ceramidase, N-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119|Reactome: R-HSA-1660662 AM474_RS22890 5d58a7de6d1326a2395c845b10756a68 670 Pfam PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal 505 665 3.9E-47 T 29-03-2018 IPR031331 Neutral/alkaline non-lysosomal ceramidase, C-terminal KEGG: 00600+3.5.1.23|MetaCyc: PWY-6483|MetaCyc: PWY-7119 AM474_RS17795 632d0f07fbfb3e45b33994ef5ffb6f95 416 Pfam PF04233 Phage Mu protein F like protein 56 169 2.0E-17 T 29-03-2018 IPR006528 Phage head morphogenesis domain AM474_RS03085 2d35cfe88c284dab7fddc362d44bb02a 960 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 67 340 8.2E-73 T 29-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AM474_RS03085 2d35cfe88c284dab7fddc362d44bb02a 960 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 56 951 0.0 T 29-03-2018 IPR022303 Conjugative transfer ATPase AM474_RS03085 2d35cfe88c284dab7fddc362d44bb02a 960 SUPERFAMILY SSF52540 486 611 2.34E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03085 2d35cfe88c284dab7fddc362d44bb02a 960 SUPERFAMILY SSF52540 647 879 2.34E-38 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03085 2d35cfe88c284dab7fddc362d44bb02a 960 Gene3D G3DSA:3.40.50.300 530 895 2.4E-16 T 29-03-2018 AM474_RS31790 2a56e1096989a26f8e96b5f6ca4761e4 349 SUPERFAMILY SSF117892 95 238 2.09E-13 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31790 2a56e1096989a26f8e96b5f6ca4761e4 349 PIRSF PIRSF005651 37 341 4.2E-90 T 29-03-2018 IPR010200 HflC GO:0016021|GO:0052547 AM474_RS31790 2a56e1096989a26f8e96b5f6ca4761e4 349 Pfam PF01145 SPFH domain / Band 7 family 63 248 7.1E-30 T 29-03-2018 IPR001107 Band 7 domain AM474_RS31790 2a56e1096989a26f8e96b5f6ca4761e4 349 Gene3D G3DSA:1.10.880.10 5 284 1.1E-4 T 29-03-2018 AM474_RS31790 2a56e1096989a26f8e96b5f6ca4761e4 349 SMART SM00244 59 233 3.4E-9 T 29-03-2018 IPR001107 Band 7 domain AM474_RS09310 c2e87b80dbc7175007bb15be503aeea5 150 SUPERFAMILY SSF54690 3 148 5.1E-51 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09310 c2e87b80dbc7175007bb15be503aeea5 150 Pfam PF02391 MoaE protein 6 119 2.5E-34 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS09310 c2e87b80dbc7175007bb15be503aeea5 150 Gene3D G3DSA:3.90.1170.40 1 148 3.2E-55 T 29-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AM474_RS05530 b986a04cf5f681245341bacedd089806 352 Pfam PF13343 Bacterial extracellular solute-binding protein 89 313 1.3E-34 T 29-03-2018 AM474_RS05530 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 170 350 8.5E-20 T 29-03-2018 AM474_RS05530 b986a04cf5f681245341bacedd089806 352 SUPERFAMILY SSF53850 36 345 6.73E-52 T 29-03-2018 AM474_RS05530 b986a04cf5f681245341bacedd089806 352 Gene3D G3DSA:3.40.190.10 38 169 5.4E-12 T 29-03-2018 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Gene3D G3DSA:3.40.30.10 476 588 1.6E-15 T 29-03-2018 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 ProSitePatterns PS00194 Thioredoxin family active site. 494 512 - T 29-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 586 38.358 T 29-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Pfam PF13899 Thioredoxin-like 478 549 4.1E-12 T 29-03-2018 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Gene3D G3DSA:2.60.40.1250 28 150 8.4E-36 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 SUPERFAMILY SSF74863 31 141 9.68E-35 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Pfam PF11412 Disulphide bond corrector protein DsbC 32 138 8.5E-31 T 29-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 179 357 3.2E-10 T 29-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM474_RS32035 16834f77507abbf6c464bc3e44a32961 589 SUPERFAMILY SSF52833 482 580 5.76E-20 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS16705 9499d903aa76bf393c017881a7c69f12 184 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 172 2.3E-30 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS16705 9499d903aa76bf393c017881a7c69f12 184 SUPERFAMILY SSF101327 7 171 2.09E-40 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS16705 9499d903aa76bf393c017881a7c69f12 184 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 4 182 31.486 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 Pfam PF00717 Peptidase S24-like 85 168 9.9E-22 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 29-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 29-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 SUPERFAMILY SSF51306 77 271 1.02E-64 T 29-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 Gene3D G3DSA:2.10.109.10 75 279 5.9E-56 T 29-03-2018 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 5.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 5.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 5.4E-26 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 266 2.2E-49 T 29-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM474_RS22485 f809a6b13d9c0ba79dc94b9d68e3b512 284 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 29-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM474_RS04405 b84525bb4037581a774a22c96d1c4ddc 288 Gene3D G3DSA:3.60.15.10 20 283 1.4E-37 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04405 b84525bb4037581a774a22c96d1c4ddc 288 SMART SM00849 54 272 7.9E-28 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04405 b84525bb4037581a774a22c96d1c4ddc 288 Pfam PF00753 Metallo-beta-lactamase superfamily 51 272 1.3E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS04405 b84525bb4037581a774a22c96d1c4ddc 288 SUPERFAMILY SSF56281 48 276 2.49E-34 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS03080 61d58d500653416874964b4617db9978 146 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 12 142 2.6E-53 T 29-03-2018 IPR022262 Lipoprotein, putative AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 SUPERFAMILY SSF118215 10 402 1.03E-122 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 3.2E-28 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 29-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 3 429 38.22 T 29-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 Gene3D G3DSA:1.10.3860.10 2 409 6.6E-119 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS24860 78defffdc394122a42cf03abd1d28dbd 436 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 1.4E-113 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS23110 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 PIRSF PIRSF006066 1 427 1.5E-155 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS23110 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 4.7E-148 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS23110 89f08e4a87fc26e87cb4e2d42cb9c0b3 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 2.1E-123 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM474_RS06560 ad1fd0cd594759a79383270f16b315c4 129 Pfam PF03788 LrgA family 23 115 1.2E-24 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-21 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF53850 91 291 9.93E-34 T 29-03-2018 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 Pfam PF03466 LysR substrate binding domain 88 288 2.1E-38 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:1.10.10.10 1 83 1.3E-23 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:3.40.190.10 87 175 5.4E-21 T 29-03-2018 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 Gene3D G3DSA:3.40.190.10 176 262 5.3E-14 T 29-03-2018 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS12050 5666a5a2055b728413c74514b47d1296 292 SUPERFAMILY SSF46785 1 82 9.62E-24 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS04150 90d39231c4f402901fcc5192bf567770 199 Gene3D G3DSA:2.40.10.220 2 191 6.1E-20 T 29-03-2018 AM474_RS04150 90d39231c4f402901fcc5192bf567770 199 Pfam PF07238 PilZ domain 78 174 1.6E-11 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS20525 20fced965b743a415db2e18619d1b52c 154 PIRSF PIRSF003174 1 154 9.3E-70 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AM474_RS20525 20fced965b743a415db2e18619d1b52c 154 Pfam PF05981 CreA protein 23 150 3.8E-59 T 29-03-2018 IPR010292 Uncharacterised protein family CreA AM474_RS27195 3db1a55bfc0aff6f51ecfae944eb666e 301 Gene3D G3DSA:3.40.190.10 46 271 2.2E-9 T 29-03-2018 AM474_RS27195 3db1a55bfc0aff6f51ecfae944eb666e 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 136 265 1.8E-7 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS27195 3db1a55bfc0aff6f51ecfae944eb666e 301 SUPERFAMILY SSF53850 52 266 6.95E-20 T 29-03-2018 AM474_RS19910 adcdc37346100db5f9d39e883bc36f1f 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 29-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS19910 adcdc37346100db5f9d39e883bc36f1f 215 Gene3D G3DSA:3.40.1050.10 1 208 2.8E-69 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS19910 adcdc37346100db5f9d39e883bc36f1f 215 SMART SM00947 30 193 3.6E-65 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS19910 adcdc37346100db5f9d39e883bc36f1f 215 SUPERFAMILY SSF53056 1 202 4.32E-73 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS19910 adcdc37346100db5f9d39e883bc36f1f 215 Pfam PF00484 Carbonic anhydrase 37 187 7.5E-50 T 29-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM474_RS30235 47320ac7f0c42b619d0b6f3b11a56d6c 202 Pfam PF06930 Protein of unknown function (DUF1282) 8 177 2.2E-20 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 6.7E-8 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 237 255 6.7E-8 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 81 6.7E-8 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 Gene3D G3DSA:3.40.50.2300 132 309 5.7E-30 T 29-03-2018 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 Pfam PF13433 Periplasmic binding protein domain 10 369 2.9E-114 T 29-03-2018 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 Gene3D G3DSA:3.40.50.2300 9 131 2.1E-13 T 29-03-2018 AM474_RS06160 1179b2b13891ccea4beca0826aa2e692 385 SUPERFAMILY SSF53822 10 375 7.4E-88 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS07080 d8271356d198452abffaeb37b2936a6c 216 Pfam PF11182 Alginate O-acetyl transferase AlgF 16 194 1.5E-85 T 29-03-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 AM474_RS07080 d8271356d198452abffaeb37b2936a6c 216 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 13 216 3.0E-113 T 29-03-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 AM474_RS21925 cc0b087cbee4c7e20e5234f83da86a54 94 Pfam PF12266 Protein of unknown function (DUF3613) 21 87 1.9E-30 T 29-03-2018 IPR022053 Protein of unknown function DUF3613 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 Gene3D G3DSA:3.90.1150.10 278 393 7.9E-20 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 SUPERFAMILY SSF53383 15 384 2.61E-101 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 PIRSF PIRSF000521 146 385 1.5E-27 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 PIRSF PIRSF000521 3 142 1.0E-5 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 Pfam PF00202 Aminotransferase class-III 19 382 4.1E-80 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 Gene3D G3DSA:3.90.1150.10 4 164 1.0E-36 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 210 247 - T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS12035 bd6d00800bace787148f1ae1b1e89757 393 Gene3D G3DSA:3.40.640.10 165 277 1.9E-34 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS29790 fbaf0dd4915963eba31c2c2b8f3f93d5 426 Gene3D G3DSA:1.20.1250.20 225 414 2.9E-18 T 29-03-2018 AM474_RS29790 fbaf0dd4915963eba31c2c2b8f3f93d5 426 Pfam PF07690 Major Facilitator Superfamily 42 374 2.0E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS29790 fbaf0dd4915963eba31c2c2b8f3f93d5 426 SUPERFAMILY SSF103473 32 414 4.32E-52 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29790 fbaf0dd4915963eba31c2c2b8f3f93d5 426 Gene3D G3DSA:1.20.1250.20 25 217 3.7E-25 T 29-03-2018 AM474_RS03555 671f6e92cefaac2b563df249af0ae61c 317 Pfam PF01882 Protein of unknown function DUF58 213 258 6.0E-11 T 29-03-2018 IPR002881 Domain of unknown function DUF58 AM474_RS01850 7ca876a6ecb6b26da7e8940bb0c1fc2b 192 Pfam PF02342 TerD domain 1 186 9.6E-82 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS01850 7ca876a6ecb6b26da7e8940bb0c1fc2b 192 Gene3D G3DSA:2.60.60.30 19 186 1.8E-60 T 29-03-2018 AM474_RS08280 5df866452c97223be1afe0e9820e4561 154 Gene3D G3DSA:1.10.1220.10 4 69 7.2E-7 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS08280 5df866452c97223be1afe0e9820e4561 154 SUPERFAMILY SSF47598 4 42 5.5E-6 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM474_RS02345 7009349875352b65cb93135570b9d5b5 126 Pfam PF08748 Phage tail assembly chaperone 1 126 4.7E-42 T 29-03-2018 IPR014859 Phage tail assembly chaperone AM474_RS15985 8e45ca884d6d797964edce40de3682a4 300 Pfam PF00072 Response regulator receiver domain 7 120 5.0E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15985 8e45ca884d6d797964edce40de3682a4 300 SUPERFAMILY SSF52172 1 132 6.26E-37 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS15985 8e45ca884d6d797964edce40de3682a4 300 SMART SM00448 4 119 9.1E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS15985 8e45ca884d6d797964edce40de3682a4 300 Gene3D G3DSA:3.40.50.2300 1 294 2.3E-37 T 29-03-2018 AM474_RS13660 116496cd760589f65591207f175615ba 179 SUPERFAMILY SSF51182 67 175 5.63E-24 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS13660 116496cd760589f65591207f175615ba 179 Gene3D G3DSA:2.60.120.10 54 179 4.1E-14 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS13660 116496cd760589f65591207f175615ba 179 Pfam PF01381 Helix-turn-helix 5 59 1.5E-16 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS13660 116496cd760589f65591207f175615ba 179 Gene3D G3DSA:1.10.260.40 1 53 2.5E-18 T 29-03-2018 AM474_RS13660 116496cd760589f65591207f175615ba 179 SMART SM00530 4 59 2.2E-17 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS13660 116496cd760589f65591207f175615ba 179 Pfam PF07883 Cupin domain 118 174 1.3E-13 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS13660 116496cd760589f65591207f175615ba 179 SUPERFAMILY SSF47413 3 66 2.95E-18 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS14250 9da076514e60de6fc56a96ebe0bfbe9a 184 PIRSF PIRSF005413 1 182 6.4E-64 T 29-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14250 9da076514e60de6fc56a96ebe0bfbe9a 184 Gene3D G3DSA:2.60.370.10 55 176 1.1E-43 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14250 9da076514e60de6fc56a96ebe0bfbe9a 184 SUPERFAMILY SSF110111 54 174 1.12E-46 T 29-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14250 9da076514e60de6fc56a96ebe0bfbe9a 184 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 171 1.6E-49 T 29-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 Gene3D G3DSA:3.30.1300.30 51 121 2.1E-16 T 29-03-2018 AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR01707 gspI: type II secretion system protein I 9 107 1.2E-36 T 29-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.6E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.8E-9 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 Gene3D G3DSA:3.30.700.10 10 50 1.6E-4 T 29-03-2018 AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 Pfam PF02501 Type II secretion system (T2SS), protein I 43 120 6.4E-19 T 29-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 AM474_RS22095 34a0f8f21836bb3f008df9bf1400324b 124 SUPERFAMILY SSF54523 41 120 2.04E-13 T 29-03-2018 AM474_RS24165 afe8e43408b9e8dfe8c711d728bcd62c 115 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 17 105 8.2E-27 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AM474_RS24165 afe8e43408b9e8dfe8c711d728bcd62c 115 Pfam PF03334 Na+/H+ antiporter subunit 17 97 3.1E-27 T 29-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 AM474_RS14460 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.10 455 681 2.8E-66 T 29-03-2018 AM474_RS14460 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.10.1370.10 142 448 2.1E-56 T 29-03-2018 AM474_RS14460 c7c21e281c74ef01a575645d552f9853 681 Pfam PF01432 Peptidase family M3 224 675 1.6E-150 T 29-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AM474_RS14460 c7c21e281c74ef01a575645d552f9853 681 Gene3D G3DSA:1.20.1050.40 5 140 2.6E-40 T 29-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal AM474_RS14460 c7c21e281c74ef01a575645d552f9853 681 SUPERFAMILY SSF55486 4 675 2.2E-208 T 29-03-2018 AM474_RS07410 84eac3b6f77dbef7a9bd614763e0a594 136 Pfam PF13652 Putative quorum-sensing-regulated virulence factor 20 131 3.4E-64 T 29-03-2018 IPR025203 Putative quorum-sensing-regulated virulence factor, QSregVF AM474_RS29660 95050583bd2f2283b89acf721504962d 387 PIRSF PIRSF004925 1 384 6.9E-116 T 29-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter AM474_RS29660 95050583bd2f2283b89acf721504962d 387 SUPERFAMILY SSF103473 2 374 8.37E-43 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29660 95050583bd2f2283b89acf721504962d 387 Pfam PF12832 MFS_1 like family 8 347 1.6E-38 T 29-03-2018 IPR024989 Major facilitator superfamily associated domain AM474_RS29660 95050583bd2f2283b89acf721504962d 387 Gene3D G3DSA:1.20.1250.20 186 380 3.6E-19 T 29-03-2018 AM474_RS29660 95050583bd2f2283b89acf721504962d 387 Gene3D G3DSA:1.20.1250.20 1 179 2.5E-14 T 29-03-2018 AM474_RS17485 7052ac878880fc61d82f82aa91959fe1 861 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 72 748 52.273 T 29-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 AM474_RS17485 7052ac878880fc61d82f82aa91959fe1 861 Pfam PF00535 Glycosyl transferase family 2 249 431 1.6E-23 T 29-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AM474_RS17485 7052ac878880fc61d82f82aa91959fe1 861 Gene3D G3DSA:3.90.550.10 219 505 2.5E-21 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS17485 7052ac878880fc61d82f82aa91959fe1 861 SUPERFAMILY SSF53448 247 533 8.06E-29 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS09550 d22255dec2047cb3246c645958b72f40 379 SUPERFAMILY SSF56219 73 375 4.19E-27 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09550 d22255dec2047cb3246c645958b72f40 379 Gene3D G3DSA:3.60.10.10 61 376 1.9E-26 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS09550 d22255dec2047cb3246c645958b72f40 379 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 357 6.4E-11 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS05900 45bac3e881337a1fe4aa15d8420c623c 267 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS05900 45bac3e881337a1fe4aa15d8420c623c 267 Pfam PF00005 ABC transporter 19 174 2.0E-27 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS05900 45bac3e881337a1fe4aa15d8420c623c 267 SUPERFAMILY SSF52540 4 234 5.23E-47 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05900 45bac3e881337a1fe4aa15d8420c623c 267 SMART SM00382 28 224 3.2E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS05900 45bac3e881337a1fe4aa15d8420c623c 267 Gene3D G3DSA:3.40.50.300 1 261 7.2E-44 T 29-03-2018 AM474_RS03635 ec3f5878a00a4660e1d39968481947a2 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 2.0E-52 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS03635 ec3f5878a00a4660e1d39968481947a2 264 SUPERFAMILY SSF52096 5 263 1.38E-69 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS03635 ec3f5878a00a4660e1d39968481947a2 264 Gene3D G3DSA:3.90.226.10 4 264 8.1E-67 T 29-03-2018 AM474_RS24980 4fbcf690082afaae37baf0efa3cd7204 220 Pfam PF01596 O-methyltransferase 22 219 1.3E-62 T 29-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AM474_RS24980 4fbcf690082afaae37baf0efa3cd7204 220 SUPERFAMILY SSF53335 8 220 5.19E-47 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS24980 4fbcf690082afaae37baf0efa3cd7204 220 Gene3D G3DSA:3.40.50.150 2 220 1.9E-38 T 29-03-2018 AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 SUPERFAMILY SSF46785 5 83 1.76E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 Gene3D G3DSA:3.40.190.10 92 184 2.4E-18 T 29-03-2018 AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 Pfam PF03466 LysR substrate binding domain 92 294 2.5E-37 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 Gene3D G3DSA:1.10.10.10 3 85 7.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.4E-16 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 Gene3D G3DSA:3.40.190.10 185 262 1.7E-6 T 29-03-2018 AM474_RS26170 50d7b29e9f337b2b331d5a31e172e4ad 297 SUPERFAMILY SSF53850 93 294 4.5E-35 T 29-03-2018 AM474_RS21475 0a06b93826055567140ba382d3ded94c 228 SUPERFAMILY SSF110849 29 225 7.32E-58 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS21475 0a06b93826055567140ba382d3ded94c 228 PIRSF PIRSF029669 15 228 3.2E-82 T 29-03-2018 IPR016932 Uncharacterised conserved protein UCP029669 AM474_RS21475 0a06b93826055567140ba382d3ded94c 228 Gene3D G3DSA:1.10.8.10 155 216 1.1E-13 T 29-03-2018 AM474_RS21475 0a06b93826055567140ba382d3ded94c 228 Pfam PF08857 Putative ParB-like nuclease 32 187 1.1E-46 T 29-03-2018 IPR014956 Putative ParB-like nuclease AM474_RS21475 0a06b93826055567140ba382d3ded94c 228 Gene3D G3DSA:3.90.1530.10 25 154 6.5E-39 T 29-03-2018 AM474_RS17800 b41f7d34743ec06a2acc5f15aa95d86c 492 Pfam PF06074 Protein of unknown function (DUF935) 51 480 1.9E-79 T 29-03-2018 IPR009279 Protein of unknown function DUF935 AM474_RS23590 fc045ec51491c97b4007babc34125b59 347 Gene3D G3DSA:3.30.1150.10 238 343 1.6E-19 T 29-03-2018 AM474_RS23590 fc045ec51491c97b4007babc34125b59 347 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 266 342 2.4E-14 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS23590 fc045ec51491c97b4007babc34125b59 347 Pfam PF13103 TonB C terminal 258 322 1.1E-11 T 29-03-2018 IPR006260 TonB, C-terminal GO:0006810 AM474_RS23590 fc045ec51491c97b4007babc34125b59 347 SUPERFAMILY SSF74653 229 344 2.26E-25 T 29-03-2018 AM474_RS23590 fc045ec51491c97b4007babc34125b59 347 TIGRFAM TIGR02794 tolA_full: protein TolA 15 342 4.3E-61 T 29-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.5E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.5E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.5E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 PRINTS PR00069 Aldo-keto reductase signature 125 142 4.5E-17 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 Pfam PF00248 Aldo/keto reductase family 15 260 3.5E-54 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 Gene3D G3DSA:3.20.20.100 1 273 5.9E-81 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 PIRSF PIRSF000097 1 261 5.2E-37 T 29-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AM474_RS22675 e3ada14e23e33a47a723f48df19065e6 273 SUPERFAMILY SSF51430 8 263 5.24E-79 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS03730 638214ea482e8e912c96426e248cd319 242 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 236 2.0E-56 T 29-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AM474_RS03730 638214ea482e8e912c96426e248cd319 242 Gene3D G3DSA:3.40.50.2300 59 238 9.3E-17 T 29-03-2018 AM474_RS05185 37531d42b71f4556013fbdb561dcd929 310 Gene3D G3DSA:1.10.3720.10 30 309 3.5E-42 T 29-03-2018 AM474_RS05185 37531d42b71f4556013fbdb561dcd929 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 301 1.3E-11 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05185 37531d42b71f4556013fbdb561dcd929 310 SUPERFAMILY SSF161098 70 296 3.27E-49 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS18165 8baf497f0a87bdb915c84bc0c4876064 318 Gene3D G3DSA:3.40.50.2000 15 295 2.1E-12 T 29-03-2018 AM474_RS18165 8baf497f0a87bdb915c84bc0c4876064 318 Pfam PF13524 Glycosyl transferases group 1 212 287 2.2E-8 T 29-03-2018 AM474_RS18165 8baf497f0a87bdb915c84bc0c4876064 318 SUPERFAMILY SSF53756 45 295 1.51E-9 T 29-03-2018 AM474_RS04785 1e58c04d861f213645e0b7b2beea53bb 219 Pfam PF05036 Sporulation related domain 143 213 1.4E-17 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS04785 1e58c04d861f213645e0b7b2beea53bb 219 SUPERFAMILY SSF110997 143 215 2.09E-18 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS04785 1e58c04d861f213645e0b7b2beea53bb 219 Gene3D G3DSA:3.30.70.1070 144 215 2.7E-16 T 29-03-2018 IPR007730 Sporulation-related domain GO:0042834 AM474_RS27970 d42e8c76318fbfcb2b2ef7f4d69a8a5b 161 Gene3D G3DSA:3.40.630.30 67 160 1.3E-19 T 29-03-2018 AM474_RS27970 d42e8c76318fbfcb2b2ef7f4d69a8a5b 161 SUPERFAMILY SSF55729 74 158 2.3E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS27970 d42e8c76318fbfcb2b2ef7f4d69a8a5b 161 Pfam PF14542 GCN5-related N-acetyl-transferase 82 155 1.9E-22 T 29-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AM474_RS21120 525c346d72a8e5b47a4f6e03a350fbe1 215 Pfam PF05494 MlaC protein 33 195 4.5E-43 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM474_RS21120 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:3.10.450.50 76 169 1.5E-23 T 29-03-2018 AM474_RS21120 525c346d72a8e5b47a4f6e03a350fbe1 215 Gene3D G3DSA:3.10.450.50 25 75 0.003 T 29-03-2018 AM474_RS21120 525c346d72a8e5b47a4f6e03a350fbe1 215 PIRSF PIRSF004649 1 210 2.7E-59 T 29-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM474_RS00615 76f9d63973ac1228663c2504369bca3c 148 SUPERFAMILY SSF54427 8 132 3.27E-22 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS00615 76f9d63973ac1228663c2504369bca3c 148 Pfam PF12680 SnoaL-like domain 10 118 1.1E-11 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS00615 76f9d63973ac1228663c2504369bca3c 148 Gene3D G3DSA:3.10.450.50 5 139 5.4E-19 T 29-03-2018 AM474_RS21725 0d0c1d807aa5083c6cbdd3723b5a7cba 194 SUPERFAMILY SSF52317 5 189 7.02E-53 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21725 0d0c1d807aa5083c6cbdd3723b5a7cba 194 Pfam PF01965 DJ-1/PfpI family 5 186 3.5E-50 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS21725 0d0c1d807aa5083c6cbdd3723b5a7cba 194 Gene3D G3DSA:3.40.50.880 1 191 8.2E-44 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS21725 0d0c1d807aa5083c6cbdd3723b5a7cba 194 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 188 3.5E-56 T 29-03-2018 IPR006286 Peptidase C56, PfpI AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 SUPERFAMILY SSF51182 189 477 6.68E-77 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 Gene3D G3DSA:2.60.120.10 346 457 1.2E-27 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 3.0E-175 T 29-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 Pfam PF00483 Nucleotidyl transferase 4 291 7.8E-54 T 29-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.7E-67 T 29-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 SUPERFAMILY SSF53448 2 286 4.16E-65 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS15495 ee13b2cfc87ba728b198f6502b52eb06 479 Gene3D G3DSA:3.90.550.10 1 345 5.1E-89 T 29-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM474_RS11325 98dc765b54fb37ce41f4e996fd415bf3 140 Pfam PF04519 Polymer-forming cytoskeletal 22 119 6.8E-25 T 29-03-2018 IPR007607 Protein of unknown function DUF583 AM474_RS02115 cd64f24a37389cf917c070a70ca53f79 145 Pfam PF12158 Protein of unknown function (DUF3592) 9 133 1.1E-16 T 29-03-2018 IPR021994 Protein of unknown function DUF3592 AM474_RS07115 4ac1b8500606c5eb9c81ec5e2e96300e 115 Pfam PF00892 EamA-like transporter family 38 111 5.6E-9 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS07115 4ac1b8500606c5eb9c81ec5e2e96300e 115 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 115 28.859 T 29-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE AM474_RS07115 4ac1b8500606c5eb9c81ec5e2e96300e 115 SUPERFAMILY SSF103481 33 113 2.09E-13 T 29-03-2018 AM474_RS01220 7b568d15d5890288c83d40c0c3ddc0be 136 Gene3D G3DSA:3.30.700.10 15 112 2.8E-8 T 29-03-2018 AM474_RS01220 7b568d15d5890288c83d40c0c3ddc0be 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 5.2E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS01220 7b568d15d5890288c83d40c0c3ddc0be 136 SUPERFAMILY SSF54523 15 98 8.63E-11 T 29-03-2018 AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 29-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 2.0E-28 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 8.1E-28 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-35 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.2E-35 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-35 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.2E-35 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS04745 7225cd22d4f4d5036189328937d53be5 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 8.5E-154 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AM474_RS01575 d1905c45c6c8723f8675b700a3a3b985 634 SUPERFAMILY SSF52540 1 203 3.5E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01575 d1905c45c6c8723f8675b700a3a3b985 634 SUPERFAMILY SSF52540 257 379 3.5E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS01575 d1905c45c6c8723f8675b700a3a3b985 634 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 26 358 2.1E-19 T 29-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM474_RS01575 d1905c45c6c8723f8675b700a3a3b985 634 Gene3D G3DSA:3.40.50.300 1 397 2.0E-22 T 29-03-2018 AM474_RS32015 c5e4b6e1515d09cf9ec5c73e1344f8d6 303 Pfam PF13557 Putative MetA-pathway of phenol degradation 55 299 2.0E-56 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 3.7E-14 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 Pfam PF03466 LysR substrate binding domain 99 301 4.2E-27 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 SUPERFAMILY SSF46785 12 97 1.5E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 Gene3D G3DSA:1.10.10.10 8 90 4.6E-18 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 Gene3D G3DSA:3.40.190.10 91 209 2.5E-15 T 29-03-2018 AM474_RS13305 0cf935cfc88f8452bef125c882992728 320 SUPERFAMILY SSF53850 104 306 7.78E-25 T 29-03-2018 AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 Gene3D G3DSA:1.10.530.10 241 361 2.8E-31 T 29-03-2018 AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 Gene3D G3DSA:1.10.8.350 132 235 2.6E-36 T 29-03-2018 AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 Gene3D G3DSA:1.10.8.350 54 131 5.0E-9 T 29-03-2018 AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 63 355 4.7E-116 T 29-03-2018 IPR011757 Lytic transglycosylase MltB AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 Pfam PF13406 Transglycosylase SLT domain 59 352 1.0E-92 T 29-03-2018 IPR031304 Transglycosylase SLT domain 2 AM474_RS21165 e566e3270793003c18a92a04ea401bb3 367 SUPERFAMILY SSF53955 50 354 1.69E-95 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS30390 90abe33446e7cfd8182fbbac836a7570 416 Gene3D G3DSA:2.40.160.10 1 416 3.9E-121 T 29-03-2018 AM474_RS30390 90abe33446e7cfd8182fbbac836a7570 416 Pfam PF03573 outer membrane porin, OprD family 29 414 6.8E-156 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS26925 7932c22b3b5faec40fd0f554c687c049 203 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 4 180 4.9E-85 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS26925 7932c22b3b5faec40fd0f554c687c049 203 SUPERFAMILY SSF46626 16 193 4.04E-31 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26925 7932c22b3b5faec40fd0f554c687c049 203 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 179 4.3E-87 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS26925 7932c22b3b5faec40fd0f554c687c049 203 Gene3D G3DSA:1.10.760.10 36 203 1.7E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS03315 7316100db997fa301212246dcbec6873 132 Pfam PF01641 SelR domain 11 128 2.4E-52 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM474_RS03315 7316100db997fa301212246dcbec6873 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 131 4.0E-54 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM474_RS03315 7316100db997fa301212246dcbec6873 132 SUPERFAMILY SSF51316 7 131 1.08E-56 T 29-03-2018 IPR011057 Mss4-like AM474_RS03315 7316100db997fa301212246dcbec6873 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.608 T 29-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AM474_RS03315 7316100db997fa301212246dcbec6873 132 Gene3D G3DSA:2.170.150.20 1 132 6.7E-58 T 29-03-2018 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 Gene3D G3DSA:2.40.50.140 285 339 5.2E-7 T 29-03-2018 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 Gene3D G3DSA:2.40.50.100 248 284 0.0018 T 29-03-2018 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 Gene3D G3DSA:3.40.50.300 1 247 2.0E-71 T 29-03-2018 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 SUPERFAMILY SSF50331 241 347 2.93E-14 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 347 1.4E-107 T 29-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 Pfam PF08402 TOBE domain 274 347 4.9E-16 T 29-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 SMART SM00382 33 216 1.9E-18 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 SUPERFAMILY SSF52540 5 245 4.63E-83 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 Pfam PF00005 ABC transporter 24 165 2.6E-33 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS13105 1c01b0ab755dd242d1219607b3b5ec3b 349 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS01765 750462010ec37f29d44241ae8f053eed 116 Gene3D G3DSA:1.10.287.910 16 68 1.2E-19 T 29-03-2018 AM474_RS01765 750462010ec37f29d44241ae8f053eed 116 Pfam PF02411 MerT mercuric transport protein 1 116 1.4E-62 T 29-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM474_RS26260 750462010ec37f29d44241ae8f053eed 116 Gene3D G3DSA:1.10.287.910 16 68 1.2E-19 T 29-03-2018 AM474_RS26260 750462010ec37f29d44241ae8f053eed 116 Pfam PF02411 MerT mercuric transport protein 1 116 1.4E-62 T 29-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 3.8E-54 T 29-03-2018 AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 SUPERFAMILY SSF51735 4 250 9.35E-73 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 182 1.1E-4 T 29-03-2018 AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 Gene3D G3DSA:3.40.50.720 1 40 2.6E-11 T 29-03-2018 AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 Gene3D G3DSA:3.40.50.720 41 260 2.3E-56 T 29-03-2018 AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS00470 4d54c6c61721242db0ad2149b0c35a51 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.1E-29 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 Pfam PF13091 PLD-like domain 24 140 1.9E-14 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 Pfam PF13091 PLD-like domain 206 330 6.4E-25 T 29-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 SUPERFAMILY SSF56024 3 175 7.53E-42 T 29-03-2018 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 Gene3D G3DSA:3.30.870.10 187 353 5.5E-31 T 29-03-2018 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 376 52.906 T 29-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 SUPERFAMILY SSF56024 183 352 9.2E-40 T 29-03-2018 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 SMART SM00155 278 305 2.0 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 SMART SM00155 108 135 0.0013 T 29-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AM474_RS30110 a767ee9baf586c526d5a7f2f0c710891 401 Gene3D G3DSA:3.30.870.10 2 171 1.1E-31 T 29-03-2018 AM474_RS18900 93d173b30f99ad26cfe2f812f3f985b6 232 Gene3D G3DSA:3.40.50.300 1 227 2.2E-56 T 29-03-2018 AM474_RS18900 93d173b30f99ad26cfe2f812f3f985b6 232 Pfam PF00005 ABC transporter 17 161 1.7E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18900 93d173b30f99ad26cfe2f812f3f985b6 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 4.9E-106 T 29-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE AM474_RS18900 93d173b30f99ad26cfe2f812f3f985b6 232 SMART SM00382 26 211 1.4E-9 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18900 93d173b30f99ad26cfe2f812f3f985b6 232 SUPERFAMILY SSF52540 2 221 2.55E-59 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PIRSF PIRSF006356 1 416 3.2E-148 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 Pfam PF02274 Amidinotransferase 22 413 1.9E-118 T 29-03-2018 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 TIGRFAM TIGR01078 arcA: arginine deiminase 10 416 4.7E-178 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 Gene3D G3DSA:3.75.10.10 7 414 1.9E-102 T 29-03-2018 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 Hamap MF_00242 Arginine deiminase [arcA]. 5 416 49.544 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 352 369 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 157 175 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 372 386 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 185 200 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 PRINTS PR01466 Bacterial arginine deiminase signature 395 413 3.6E-52 T 29-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 AM474_RS16985 c733b34a75dffbca6d9bbe47ad38ee9b 418 SUPERFAMILY SSF55909 7 416 1.54E-143 T 29-03-2018 AM474_RS13365 bafc0ed73d47f97f5903914ddfec4ddd 252 Gene3D G3DSA:3.30.2010.10 32 148 7.7E-19 T 29-03-2018 AM474_RS13365 bafc0ed73d47f97f5903914ddfec4ddd 252 Pfam PF01435 Peptidase family M48 73 246 1.3E-25 T 29-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM474_RS06300 c262e2ba9ae710c86af2bfb531827c04 108 Pfam PF03869 Arc-like DNA binding domain 13 62 1.4E-28 T 29-03-2018 IPR005569 Arc-like DNA binding domain GO:0003677 AM474_RS06300 c262e2ba9ae710c86af2bfb531827c04 108 SUPERFAMILY SSF47598 14 59 1.04E-13 T 29-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 AM474_RS06300 c262e2ba9ae710c86af2bfb531827c04 108 Gene3D G3DSA:1.10.1220.10 3 107 1.5E-24 T 29-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 SUPERFAMILY SSF55120 13 342 2.01E-94 T 29-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 23 172 7.8E-38 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 191 340 1.8E-17 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 9 345 27.054 T 29-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 Gene3D G3DSA:3.30.2340.10 172 304 2.9E-25 T 29-03-2018 AM474_RS07490 3ab22cbbd84a76b4c1ba3fa04fe08be5 355 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 81 94 - T 29-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 AM474_RS08975 fb60c5bbdb3994de4aeeb0897b1537cd 250 Pfam PF01988 VIT family 32 242 5.2E-58 T 29-03-2018 IPR008217 Ccc1 family AM474_RS02785 bf29e8b790e170fbabafebf96934f23f 559 Gene3D G3DSA:3.90.1530.10 31 144 1.7E-13 T 29-03-2018 AM474_RS02785 bf29e8b790e170fbabafebf96934f23f 559 SUPERFAMILY SSF110849 37 140 5.23E-10 T 29-03-2018 IPR003115 ParB/Sulfiredoxin AM474_RS02785 bf29e8b790e170fbabafebf96934f23f 559 TIGRFAM TIGR03764 ICE_PFGI_1_parB: integrating conjugative element, PFGI_1 class, ParB family protein 28 290 5.4E-119 T 29-03-2018 IPR022304 Integrating conjugative element, PFGI-1, ParB AM474_RS21085 470b791a202dc896224abba07a009687 175 Gene3D G3DSA:2.60.450.10 24 161 5.5E-24 T 29-03-2018 AM474_RS21085 470b791a202dc896224abba07a009687 175 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 171 1.9E-46 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM474_RS21085 470b791a202dc896224abba07a009687 175 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 2 171 23.831 T 29-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 AM474_RS21085 470b791a202dc896224abba07a009687 175 Pfam PF03968 OstA-like protein 35 145 3.7E-26 T 29-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal AM474_RS04860 e8afef23e957f30075b4da66df1943af 442 Gene3D G3DSA:3.40.50.1110 206 428 1.7E-31 T 29-03-2018 AM474_RS04860 e8afef23e957f30075b4da66df1943af 442 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 218 413 2.6E-26 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS04860 e8afef23e957f30075b4da66df1943af 442 SUPERFAMILY SSF52266 212 419 1.18E-50 T 29-03-2018 IPR013830 SGNH hydrolase-type esterase domain AM474_RS02350 b92b81b43000a7737d654b856b48fe46 217 Gene3D G3DSA:2.40.30.20 20 100 7.1E-13 T 29-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM474_RS02350 b92b81b43000a7737d654b856b48fe46 217 Pfam PF08813 Phage tail tube protein, TTP 51 214 3.2E-58 T 29-03-2018 IPR014918 Phage tail tube protein 3 AM474_RS25530 66b2bc9a9f310dcff509e0e62fd449a4 353 SUPERFAMILY SSF63829 300 350 5.67E-58 T 29-03-2018 AM474_RS25530 66b2bc9a9f310dcff509e0e62fd449a4 353 SUPERFAMILY SSF63829 41 267 5.67E-58 T 29-03-2018 AM474_RS25530 66b2bc9a9f310dcff509e0e62fd449a4 353 Pfam PF03088 Strictosidine synthase 147 234 2.2E-30 T 29-03-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 AM474_RS25530 66b2bc9a9f310dcff509e0e62fd449a4 353 Gene3D G3DSA:2.120.10.30 46 352 1.3E-45 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS09155 2c9b6541d88d2dcd24cbefcfd84890c3 424 Pfam PF00999 Sodium/hydrogen exchanger family 8 409 1.6E-74 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS09405 19b5839ab3153430c29cd405e1c61df4 488 PIRSF PIRSF006446 2 464 1.4E-233 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM474_RS09405 19b5839ab3153430c29cd405e1c61df4 488 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 439 1.8E-168 T 29-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AM474_RS20600 974ec33c7d9781fab4a9a1435b2783af 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.4E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20600 974ec33c7d9781fab4a9a1435b2783af 166 Pfam PF12019 Type II transport protein GspH 44 146 1.1E-6 T 29-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 AM474_RS20600 974ec33c7d9781fab4a9a1435b2783af 166 Gene3D G3DSA:3.30.700.10 6 159 5.4E-6 T 29-03-2018 AM474_RS20600 974ec33c7d9781fab4a9a1435b2783af 166 SUPERFAMILY SSF54523 6 140 4.87E-14 T 29-03-2018 AM474_RS20335 682e56cd29a54aeb5a218dcdb40801d3 187 ProSitePatterns PS00356 LacI-type HTH domain signature. 26 44 - T 29-03-2018 AM474_RS20335 682e56cd29a54aeb5a218dcdb40801d3 187 Gene3D G3DSA:1.10.357.10 6 187 1.0E-17 T 29-03-2018 AM474_RS20335 682e56cd29a54aeb5a218dcdb40801d3 187 SUPERFAMILY SSF48498 81 172 1.13E-12 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS20335 682e56cd29a54aeb5a218dcdb40801d3 187 SUPERFAMILY SSF46689 23 79 2.84E-6 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS19450 635a2daa3d6bcdee300298461a88c43e 216 PIRSF PIRSF006324 4 215 4.5E-57 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS19450 635a2daa3d6bcdee300298461a88c43e 216 Pfam PF01810 LysE type translocator 17 212 4.9E-57 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS19450 635a2daa3d6bcdee300298461a88c43e 216 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 23 210 2.0E-64 T 29-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 AM474_RS20060 2f6f6bde5373447143e41cef96285658 180 Gene3D G3DSA:2.60.40.1090 43 180 2.1E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS20060 2f6f6bde5373447143e41cef96285658 180 SMART SM00972 119 177 7.4E-22 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20060 2f6f6bde5373447143e41cef96285658 180 Pfam PF05229 Spore Coat Protein U domain 31 177 2.6E-36 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS29160 23074cb94f74db8ab3fa3f8520418487 130 Pfam PF11720 Peptidase inhibitor I78 family 66 130 1.2E-16 T 29-03-2018 IPR021719 Proteinase inhibitor I78 AM474_RS29160 23074cb94f74db8ab3fa3f8520418487 130 Gene3D G3DSA:3.40.190.10 20 121 1.3E-4 T 29-03-2018 AM474_RS31310 2d864f3c293c714b072aa7625b0f65f1 310 SUPERFAMILY SSF53613 3 305 1.71E-57 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS31310 2d864f3c293c714b072aa7625b0f65f1 310 Gene3D G3DSA:3.40.1190.20 2 310 6.8E-52 T 29-03-2018 IPR029056 Ribokinase-like AM474_RS31310 2d864f3c293c714b072aa7625b0f65f1 310 Pfam PF00294 pfkB family carbohydrate kinase 4 304 8.9E-29 T 29-03-2018 IPR011611 Carbohydrate kinase PfkB AM474_RS22045 ce965d046f078364d4d93545c12ee2ea 471 SUPERFAMILY SSF56672 2 228 5.0E-33 T 29-03-2018 AM474_RS22045 ce965d046f078364d4d93545c12ee2ea 471 Pfam PF00817 impB/mucB/samB family 24 150 4.8E-6 T 29-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AM474_RS14935 97969fabd03a4c16b9ea0b0ec88ef3d5 126 Pfam PF03899 ATP synthase I chain 9 105 2.3E-24 T 29-03-2018 IPR005598 ATP synthase protein I AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 Gene3D G3DSA:3.10.129.10 163 280 3.1E-25 T 29-03-2018 AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 Pfam PF13452 N-terminal half of MaoC dehydratase 51 130 6.5E-8 T 29-03-2018 AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 SUPERFAMILY SSF54637 163 277 1.14E-27 T 29-03-2018 IPR029069 HotDog domain AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 Pfam PF01575 MaoC like domain 165 272 4.0E-26 T 29-03-2018 IPR002539 MaoC-like domain AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 SUPERFAMILY SSF54637 9 160 3.55E-37 T 29-03-2018 IPR029069 HotDog domain AM474_RS23940 ef05374e8444e4107e41fd8b0739fa56 288 Gene3D G3DSA:3.10.129.10 14 162 4.5E-33 T 29-03-2018 AM474_RS17805 18f9f1b2ba022537dbed185fd2c74e21 567 PIRSF PIRSF007056 20 556 6.9E-228 T 29-03-2018 IPR012036 Bacteriophage Mu, Gp28 AM474_RS08200 2b035eccfcf5fb54a06d1743e7f5e158 194 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 9 189 5.8E-81 T 29-03-2018 IPR018715 Protein of unknown function DUF2239 AM474_RS28325 951179b12eed382f1c4cf7dd92da0064 360 Gene3D G3DSA:1.10.3720.10 3 344 7.7E-35 T 29-03-2018 AM474_RS28325 951179b12eed382f1c4cf7dd92da0064 360 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 2.4E-36 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS28325 951179b12eed382f1c4cf7dd92da0064 360 SUPERFAMILY SSF161098 123 339 6.28E-14 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 7.6E-180 T 29-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 Pfam PF13433 Periplasmic binding protein domain 31 407 1.6E-174 T 29-03-2018 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.2E-5 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 5.2E-5 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.2E-5 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 Gene3D G3DSA:3.40.50.2300 24 155 2.1E-25 T 29-03-2018 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 Gene3D G3DSA:3.40.50.2300 156 345 5.2E-28 T 29-03-2018 AM474_RS18920 8bc4d7650a5c043e9230edca1bb7cc11 421 SUPERFAMILY SSF53822 30 408 2.56E-93 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 Gene3D G3DSA:3.40.50.300 164 662 1.4E-27 T 29-03-2018 AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 7 657 2.0E-264 T 29-03-2018 IPR022458 Conjugative coupling factor TraG/TraD AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 7 657 0.0 T 29-03-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 Pfam PF12696 TraM recognition site of TraD and TraG 509 636 2.8E-10 T 29-03-2018 IPR032689 TraD/TraG, TraM recognition site AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 SUPERFAMILY SSF52540 399 659 4.78E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS03015 175257419ab1f80a74d4447ff8356857 728 SUPERFAMILY SSF52540 148 344 4.78E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 Gene3D G3DSA:2.70.40.10 3 115 1.4E-39 T 29-03-2018 AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 Pfam PF00692 dUTPase 17 149 1.8E-40 T 29-03-2018 IPR029054 dUTPase-like AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.336 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 4.7E-48 T 29-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 SUPERFAMILY SSF51283 2 149 4.19E-53 T 29-03-2018 IPR029054 dUTPase-like AM474_RS16205 e3ed2bd10feed59ba339d8824da74464 151 Gene3D G3DSA:2.70.40.10 116 150 2.5E-14 T 29-03-2018 AM474_RS29540 345486049d445d26a9ed513eadf95340 86 SMART SM01234 1 68 3.1E-48 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM474_RS29540 345486049d445d26a9ed513eadf95340 86 Pfam PF01809 Haemolytic domain 4 68 5.3E-31 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM474_RS29540 345486049d445d26a9ed513eadf95340 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.888 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM474_RS29540 345486049d445d26a9ed513eadf95340 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-15 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM474_RS29540 345486049d445d26a9ed513eadf95340 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 74 2.5E-30 T 29-03-2018 IPR002696 Putative membrane protein insertion efficiency factor AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.9E-35 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 69.373 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 29-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 29-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 286 9.8E-116 T 29-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 PIRSF PIRSF001365 1 292 2.3E-100 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.6E-109 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 SMART SM01130 1 289 1.5E-151 T 29-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 Gene3D G3DSA:3.20.20.70 1 292 1.8E-103 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS23890 a690f3e6c6bcced61a82ee4278ce937e 292 SUPERFAMILY SSF51569 2 289 3.87E-107 T 29-03-2018 AM474_RS04645 28e4a4f78843da2ac6d2ce917af693a5 87 Pfam PF07023 Protein of unknown function (DUF1315) 6 67 8.4E-29 T 29-03-2018 IPR009749 Protein of unknown function DUF1315 AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 Gene3D G3DSA:3.40.630.30 74 217 4.4E-8 T 29-03-2018 AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 2.0E-40 T 29-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 PIRSF PIRSF037208 1 235 1.5E-94 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 7.8E-19 T 29-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 SUPERFAMILY SSF55729 78 233 1.69E-25 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS00930 eb0218393ada957c605e945c1b5558e3 235 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 235 45.06 T 29-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 AM474_RS15475 bac33d5b82e1d07421b169fe59a14f6b 433 SUPERFAMILY SSF53756 82 161 2.67E-19 T 29-03-2018 AM474_RS15475 bac33d5b82e1d07421b169fe59a14f6b 433 SUPERFAMILY SSF53756 197 420 2.67E-19 T 29-03-2018 AM474_RS15475 bac33d5b82e1d07421b169fe59a14f6b 433 Pfam PF13692 Glycosyl transferases group 1 224 346 4.4E-6 T 29-03-2018 AM474_RS15475 bac33d5b82e1d07421b169fe59a14f6b 433 Gene3D G3DSA:3.40.50.2000 194 403 6.5E-24 T 29-03-2018 AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 PIRSF PIRSF039137 1 233 3.7E-104 T 29-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 SUPERFAMILY SSF52540 2 231 2.02E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 Pfam PF00005 ABC transporter 17 161 3.1E-34 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 SMART SM00382 26 212 3.9E-7 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS24220 8d747360fbc9aafe721718c73b011817 233 Gene3D G3DSA:3.40.50.300 1 232 6.1E-60 T 29-03-2018 AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 SUPERFAMILY SSF53850 114 323 8.87E-37 T 29-03-2018 AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 Gene3D G3DSA:3.40.190.10 106 203 1.8E-15 T 29-03-2018 AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 Pfam PF03466 LysR substrate binding domain 113 322 4.3E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 SUPERFAMILY SSF46785 31 136 6.69E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 Gene3D G3DSA:3.40.190.10 204 289 3.0E-24 T 29-03-2018 AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 86 2.3E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03420 cafdfa8a3c3281d4601d5b2ad0185b91 339 Gene3D G3DSA:1.10.10.10 8 105 5.7E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 Pfam PF00005 ABC transporter 349 496 1.8E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 558 5.9E-253 T 29-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 Gene3D G3DSA:1.20.1560.10 8 318 1.9E-23 T 29-03-2018 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 SMART SM00382 358 544 2.6E-14 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 SUPERFAMILY SSF52540 322 556 1.84E-62 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 SUPERFAMILY SSF90123 19 320 5.62E-45 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 Gene3D G3DSA:3.40.50.300 332 577 4.8E-61 T 29-03-2018 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 Pfam PF00664 ABC transporter transmembrane region 34 282 2.2E-12 T 29-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AM474_RS25275 006051cb1ab183253100fb8743fbd8ca 593 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS31185 d866cef971fa8e992302fe554b558407 391 Pfam PF00144 Beta-lactamase 16 376 1.9E-72 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS31185 d866cef971fa8e992302fe554b558407 391 Gene3D G3DSA:3.40.710.10 5 387 2.0E-87 T 29-03-2018 AM474_RS31185 d866cef971fa8e992302fe554b558407 391 SUPERFAMILY SSF56601 12 385 2.11E-90 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS14560 6492dd3145835ecb7f2e743840edb562 127 Gene3D G3DSA:1.10.260.40 1 111 4.2E-15 T 29-03-2018 AM474_RS14560 6492dd3145835ecb7f2e743840edb562 127 SMART SM00530 6 61 6.6E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS14560 6492dd3145835ecb7f2e743840edb562 127 Pfam PF01381 Helix-turn-helix 9 61 6.2E-12 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS14560 6492dd3145835ecb7f2e743840edb562 127 SUPERFAMILY SSF47413 1 65 8.73E-14 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 SUPERFAMILY SSF52540 5 235 5.75E-61 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 Gene3D G3DSA:3.40.50.300 2 237 2.0E-55 T 29-03-2018 AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 Pfam PF00005 ABC transporter 21 165 4.0E-32 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 SMART SM00382 30 221 6.0E-5 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS18655 4fd27d286117689be0e232fdecef9595 238 PIRSF PIRSF039137 1 238 2.8E-101 T 29-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:3.40.50.720 1 172 1.1E-20 T 29-03-2018 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 292 1.0E-31 T 29-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 Gene3D G3DSA:1.10.1040.10 174 299 1.0E-32 T 29-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 296 4.4E-86 T 29-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF51735 1 169 3.57E-30 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 SUPERFAMILY SSF48179 174 293 4.42E-32 T 29-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AM474_RS21410 efe3a0005cef433b72fafa9f31c9c652 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.5E-34 T 29-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 AM474_RS31590 adb4d4294b4f5159b13e468354b2ab8a 321 Pfam PF07859 alpha/beta hydrolase fold 88 295 5.8E-70 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM474_RS31590 adb4d4294b4f5159b13e468354b2ab8a 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 88 104 - T 29-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 AM474_RS31590 adb4d4294b4f5159b13e468354b2ab8a 321 Gene3D G3DSA:3.40.50.1820 2 321 8.4E-61 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS31590 adb4d4294b4f5159b13e468354b2ab8a 321 SUPERFAMILY SSF53474 43 315 1.62E-73 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS19555 ed6cb0d3e417c58befec829429760ef5 114 Pfam PF04972 BON domain 45 107 2.4E-18 T 29-03-2018 IPR007055 BON domain AM474_RS19555 ed6cb0d3e417c58befec829429760ef5 114 SMART SM00749 50 113 7.1E-10 T 29-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM474_RS14095 d0887cf734f09d401f3c86a6f1110bf9 308 Gene3D G3DSA:1.10.3470.10 3 292 8.7E-36 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS14095 d0887cf734f09d401f3c86a6f1110bf9 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 282 8.9E-38 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS26700 8e5562d96fb9042b6c4a70e1c5399fed 171 Gene3D G3DSA:1.10.3330.10 17 171 1.0E-49 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM474_RS26700 8e5562d96fb9042b6c4a70e1c5399fed 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 171 6.6E-69 T 29-03-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM474_RS26700 8e5562d96fb9042b6c4a70e1c5399fed 171 SUPERFAMILY SSF158694 11 171 1.44E-52 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM474_RS26700 8e5562d96fb9042b6c4a70e1c5399fed 171 Pfam PF09349 OHCU decarboxylase 11 169 9.6E-46 T 29-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 Gene3D G3DSA:2.40.50.100 67 278 1.6E-17 T 29-03-2018 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 Pfam PF13437 HlyD family secretion protein 249 356 5.8E-17 T 29-03-2018 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 Pfam PF13533 Biotin-lipoyl like 67 109 3.3E-6 T 29-03-2018 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 395 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 294 318 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 341 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS28685 6c7f2eedf40899c2219d1be9d50cc0ed 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 282 2.6E-39 T 29-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM474_RS29015 fbb5c76114599d364ab5d01184eaef23 631 Gene3D G3DSA:1.10.760.10 350 613 8.8E-28 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29015 fbb5c76114599d364ab5d01184eaef23 631 SUPERFAMILY SSF46626 480 524 9.72E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29015 fbb5c76114599d364ab5d01184eaef23 631 SUPERFAMILY SSF46626 576 599 9.72E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29015 fbb5c76114599d364ab5d01184eaef23 631 SUPERFAMILY SSF46626 350 409 9.72E-18 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS29015 fbb5c76114599d364ab5d01184eaef23 631 Gene3D G3DSA:1.10.760.10 98 293 0.018 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 SUPERFAMILY SSF53335 9 493 3.06E-135 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 278 284 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 172 188 1.7E-15 T 29-03-2018 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 210 1.7E-15 T 29-03-2018 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 275 287 1.7E-15 T 29-03-2018 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 Pfam PF12161 HsdM N-terminal domain 11 137 2.1E-22 T 29-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 Pfam PF02384 N-6 DNA Methylase 148 457 4.6E-96 T 29-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 AM474_RS01585 8fdd1a0814fb39eb1ea84e9a98283173 498 Gene3D G3DSA:3.40.50.150 170 456 1.2E-63 T 29-03-2018 AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 192 2.0E-8 T 29-03-2018 IPR004046 Glutathione S-transferase, C-terminal AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 SUPERFAMILY SSF52833 1 80 9.87E-25 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 SUPERFAMILY SSF47616 74 197 1.53E-32 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 Gene3D G3DSA:3.40.30.10 1 89 1.5E-28 T 29-03-2018 AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 Gene3D G3DSA:1.20.1050.10 142 196 8.1E-14 T 29-03-2018 AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 Gene3D G3DSA:1.20.1050.10 90 141 3.7E-15 T 29-03-2018 AM474_RS27290 34147e4d7c107e054115099f508a26b9 220 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 7.2E-17 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.534 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 SUPERFAMILY SSF55194 1 185 4.71E-70 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 Gene3D G3DSA:1.10.132.20 74 184 6.8E-39 T 29-03-2018 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 Gene3D G3DSA:1.10.132.20 2 73 1.0E-9 T 29-03-2018 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.7E-70 T 29-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM474_RS07625 e5dce18c9f5be27837de0c012fcb3caa 185 Pfam PF01765 Ribosome recycling factor 22 183 5.1E-62 T 29-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM474_RS18565 179966710cb1503c4a116c4e6ecb1add 832 SUPERFAMILY SSF56059 23 219 8.12E-24 T 29-03-2018 AM474_RS18565 179966710cb1503c4a116c4e6ecb1add 832 SUPERFAMILY SSF56059 326 433 8.12E-24 T 29-03-2018 AM474_RS18565 179966710cb1503c4a116c4e6ecb1add 832 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 511 819 1.6E-72 T 29-03-2018 IPR007296 Domain of unknown function DUF403 AM474_RS18565 179966710cb1503c4a116c4e6ecb1add 832 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 462 7.6E-156 T 29-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.880 285 542 1.6E-72 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 Pfam PF00117 Glutamine amidotransferase class-I 300 533 9.3E-59 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 Pfam PF06418 CTP synthase N-terminus 3 265 9.8E-125 T 29-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 Gene3D G3DSA:3.40.50.300 1 283 6.4E-128 T 29-03-2018 AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.562 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52317 287 538 2.22E-88 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 SUPERFAMILY SSF52540 1 267 1.52E-121 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07545 9c609c5ee078836afc904ffc096c6562 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 5.5E-253 T 29-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 Pfam PF00106 short chain dehydrogenase 3 192 2.0E-38 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 SUPERFAMILY SSF51735 2 211 4.48E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 Gene3D G3DSA:3.40.50.720 2 286 5.8E-53 T 29-03-2018 AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.3E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS23675 797c1f1bdafb5220e21b06cd1e6c00f2 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-17 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS17355 14a059e611d9ba4ecbcca01fa55c9216 340 SUPERFAMILY SSF53850 27 334 4.13E-77 T 29-03-2018 AM474_RS17355 14a059e611d9ba4ecbcca01fa55c9216 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 318 6.6E-61 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS17355 14a059e611d9ba4ecbcca01fa55c9216 340 Gene3D G3DSA:3.40.190.10 171 330 9.3E-29 T 29-03-2018 AM474_RS17355 14a059e611d9ba4ecbcca01fa55c9216 340 Gene3D G3DSA:3.40.190.10 24 170 9.5E-14 T 29-03-2018 AM474_RS28365 2257d68c4907c15f5fcdf80c9e13f169 129 Pfam PF12680 SnoaL-like domain 8 114 7.0E-17 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS28365 2257d68c4907c15f5fcdf80c9e13f169 129 SUPERFAMILY SSF54427 1 127 1.29E-37 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS28365 2257d68c4907c15f5fcdf80c9e13f169 129 Gene3D G3DSA:3.10.450.50 2 129 4.8E-23 T 29-03-2018 AM474_RS24770 5d242e311199d1e41032072d626fab68 262 Gene3D G3DSA:3.40.50.1820 17 257 2.5E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS24770 5d242e311199d1e41032072d626fab68 262 SUPERFAMILY SSF53474 21 258 1.35E-43 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS24770 5d242e311199d1e41032072d626fab68 262 Pfam PF01738 Dienelactone hydrolase family 46 258 7.8E-46 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM474_RS05945 58e53bed2cf733e44a39f8e70fb433ab 240 SMART SM00422 1 64 6.2E-5 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS05945 58e53bed2cf733e44a39f8e70fb433ab 240 Gene3D G3DSA:1.10.1660.10 51 107 4.6E-4 T 29-03-2018 AM474_RS05945 58e53bed2cf733e44a39f8e70fb433ab 240 SUPERFAMILY SSF46955 1 68 4.76E-13 T 29-03-2018 IPR009061 Putative DNA-binding domain AM474_RS05945 58e53bed2cf733e44a39f8e70fb433ab 240 Pfam PF13411 MerR HTH family regulatory protein 1 63 1.8E-15 T 29-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM474_RS05945 58e53bed2cf733e44a39f8e70fb433ab 240 Gene3D G3DSA:1.10.1660.10 1 50 9.1E-14 T 29-03-2018 AM474_RS03455 1078828c5afc16a5c07e83aa83d22dd6 323 Gene3D G3DSA:2.40.440.10 92 232 9.3E-30 T 29-03-2018 AM474_RS03455 1078828c5afc16a5c07e83aa83d22dd6 323 Pfam PF03734 L,D-transpeptidase catalytic domain 98 230 9.1E-16 T 29-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AM474_RS03455 1078828c5afc16a5c07e83aa83d22dd6 323 Gene3D G3DSA:3.10.350.10 38 86 0.001 T 29-03-2018 AM474_RS03455 1078828c5afc16a5c07e83aa83d22dd6 323 SUPERFAMILY SSF141523 96 230 4.32E-31 T 29-03-2018 AM474_RS05715 6d81413cacbefa402f57c67bbc25fc99 244 Pfam PF09836 Putative DNA-binding domain 6 90 1.1E-27 T 29-03-2018 IPR018640 Putative DNA-binding domain, bacteria AM474_RS04470 8161027cbe1f72041dbf2b1510093ce1 70 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.689 T 29-03-2018 IPR007040 Ribosome modulation factor AM474_RS04470 8161027cbe1f72041dbf2b1510093ce1 70 Gene3D G3DSA:1.10.10.620 3 54 4.7E-23 T 29-03-2018 AM474_RS04470 8161027cbe1f72041dbf2b1510093ce1 70 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 50 2.0E-23 T 29-03-2018 IPR007040 Ribosome modulation factor AM474_RS04470 8161027cbe1f72041dbf2b1510093ce1 70 Pfam PF04957 Ribosome modulation factor 1 54 7.1E-27 T 29-03-2018 IPR007040 Ribosome modulation factor AM474_RS10195 e064fb5a1db3b6096b0d7fdc07646611 421 Pfam PF12704 MacB-like periplasmic core domain 19 261 1.1E-12 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM474_RS10195 e064fb5a1db3b6096b0d7fdc07646611 421 Pfam PF02687 FtsX-like permease family 319 412 7.4E-13 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM474_RS15850 288ffca928be06d2ba37bb1dfec6428e 159 Pfam PF13279 Thioesterase-like superfamily 12 126 2.0E-18 T 29-03-2018 AM474_RS15850 288ffca928be06d2ba37bb1dfec6428e 159 Gene3D G3DSA:3.10.129.10 1 140 1.7E-21 T 29-03-2018 AM474_RS15850 288ffca928be06d2ba37bb1dfec6428e 159 SUPERFAMILY SSF54637 6 156 1.46E-45 T 29-03-2018 IPR029069 HotDog domain AM474_RS13385 ce485da563c5d5027bf8c13394847def 404 SUPERFAMILY SSF103473 7 386 1.24E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS13385 ce485da563c5d5027bf8c13394847def 404 Gene3D G3DSA:1.20.1250.20 4 195 2.5E-13 T 29-03-2018 AM474_RS13385 ce485da563c5d5027bf8c13394847def 404 Pfam PF07690 Major Facilitator Superfamily 27 347 7.5E-24 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS13385 ce485da563c5d5027bf8c13394847def 404 Gene3D G3DSA:1.20.1250.20 196 387 3.8E-26 T 29-03-2018 AM474_RS32315 64769f408e3fec0ee79e61a07a131ac2 477 Gene3D G3DSA:3.30.2290.10 5 224 1.9E-34 T 29-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain AM474_RS32315 64769f408e3fec0ee79e61a07a131ac2 477 SUPERFAMILY SSF111283 3 472 7.85E-95 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS32315 64769f408e3fec0ee79e61a07a131ac2 477 Pfam PF01523 Putative modulator of DNA gyrase 21 321 8.9E-43 T 29-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 SUPERFAMILY SSF51735 4 228 3.51E-45 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 Gene3D G3DSA:3.40.50.720 3 232 1.1E-38 T 29-03-2018 AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 Pfam PF00106 short chain dehydrogenase 5 194 6.8E-35 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS14200 caac0153f1c4d04aa2f29a8bbeaad2c5 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-11 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 Pfam PF00765 Autoinducer synthase 13 179 9.7E-21 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 115 136 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 137 158 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 159 176 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 2.7E-25 T 29-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 SUPERFAMILY SSF55729 1 193 1.82E-31 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 Gene3D G3DSA:3.40.630.30 1 191 2.1E-26 T 29-03-2018 AM474_RS06790 706ffa985546d4d7efc90b493612c911 201 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 51 - T 29-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 AM474_RS17455 200f0a4e9ccfc69585945cfec8052f5a 116 Pfam PF01042 Endoribonuclease L-PSP 5 114 1.8E-25 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS17455 200f0a4e9ccfc69585945cfec8052f5a 116 Gene3D G3DSA:3.30.1330.40 4 116 3.3E-27 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS17455 200f0a4e9ccfc69585945cfec8052f5a 116 SUPERFAMILY SSF55298 4 115 6.6E-31 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS18890 bfe9099ed0a0c113601cc8f82e60c23c 280 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 264 28.46 T 29-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM474_RS18890 bfe9099ed0a0c113601cc8f82e60c23c 280 Pfam PF01774 UreD urease accessory protein 57 253 2.7E-49 T 29-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 AM474_RS01890 a1379539f4c71d9a61d9e92f35a8230d 364 Pfam PF11202 Phosphoribosyl transferase (PRTase) 14 255 2.2E-90 T 29-03-2018 IPR011215 Phosphoribosyl transferase AM474_RS01890 a1379539f4c71d9a61d9e92f35a8230d 364 PIRSF PIRSF020979 5 364 3.5E-143 T 29-03-2018 IPR011215 Phosphoribosyl transferase AM474_RS01890 a1379539f4c71d9a61d9e92f35a8230d 364 Pfam PF15608 PELOTA RNA binding domain 282 361 1.5E-26 T 29-03-2018 IPR028157 PELOTA RNA-binding domain AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF53850 97 297 5.43E-28 T 29-03-2018 AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF03466 LysR substrate binding domain 96 297 3.0E-35 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 SUPERFAMILY SSF46785 7 85 5.8E-12 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:3.40.190.10 185 271 8.0E-23 T 29-03-2018 AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:3.40.190.10 94 184 3.2E-11 T 29-03-2018 AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 7.7E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS13705 eadf80ad184c48c81da7ba8ea9fc7793 309 Gene3D G3DSA:1.10.10.10 2 93 3.7E-13 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 29-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 Gene3D G3DSA:1.10.357.10 67 211 3.6E-15 T 29-03-2018 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 4.7E-12 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 SUPERFAMILY SSF46689 10 78 7.48E-16 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 Gene3D G3DSA:1.10.10.60 5 66 3.3E-16 T 29-03-2018 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-5 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS09740 f5083bbdeaf805d9009e1bc4ccf080be 215 SUPERFAMILY SSF48498 91 177 7.71E-6 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 Pfam PF02321 Outer membrane efflux protein 296 472 4.1E-18 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 Pfam PF02321 Outer membrane efflux protein 73 263 6.2E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 Gene3D G3DSA:1.20.1600.10 29 480 3.8E-86 T 29-03-2018 AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 474 2.5E-125 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 SUPERFAMILY SSF56954 64 478 8.89E-97 T 29-03-2018 AM474_RS17055 275a6ca9008c9a22d626f5388754c349 492 SUPERFAMILY SSF56954 8 39 8.89E-97 T 29-03-2018 AM474_RS31285 618922e87eb2a5663a95ac49507998a2 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 306 6.6E-17 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31285 618922e87eb2a5663a95ac49507998a2 310 SUPERFAMILY SSF161098 70 295 1.7E-48 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS31285 618922e87eb2a5663a95ac49507998a2 310 Gene3D G3DSA:1.20.58.370 14 58 6.5E-4 T 29-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain AM474_RS31285 618922e87eb2a5663a95ac49507998a2 310 Gene3D G3DSA:1.10.3720.10 77 307 1.8E-41 T 29-03-2018 AM474_RS06860 25043fd0c648609064df9ee2db973160 194 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 192 1.5E-82 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM474_RS06860 25043fd0c648609064df9ee2db973160 194 PIRSF PIRSF006102 1 193 1.7E-60 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS06860 25043fd0c648609064df9ee2db973160 194 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 192 24.554 T 29-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AM474_RS06860 25043fd0c648609064df9ee2db973160 194 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 191 7.6E-61 T 29-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AM474_RS02050 ddd3605cc747ca8beb2a998526bf60f4 231 Pfam PF12697 Alpha/beta hydrolase family 7 220 9.2E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS02050 ddd3605cc747ca8beb2a998526bf60f4 231 SUPERFAMILY SSF53474 2 224 2.1E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS02050 ddd3605cc747ca8beb2a998526bf60f4 231 Gene3D G3DSA:3.40.50.1820 2 226 2.8E-23 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS30690 753150346148aa2232279f82c6c275f0 1004 Pfam PF13700 Domain of unknown function (DUF4158) 5 163 8.9E-35 T 29-03-2018 IPR025296 Domain of unknown function DUF4158 AM474_RS30690 753150346148aa2232279f82c6c275f0 1004 Pfam PF01526 Tn3 transposase DDE domain 580 966 4.2E-140 T 29-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 SUPERFAMILY SSF52768 2 355 4.56E-105 T 29-03-2018 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 PRINTS PR01270 Histone deacetylase superfamily signature 140 163 8.9E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 PRINTS PR01270 Histone deacetylase superfamily signature 259 269 8.9E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 PRINTS PR01270 Histone deacetylase superfamily signature 174 189 8.9E-15 T 29-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 Pfam PF00850 Histone deacetylase domain 42 328 6.5E-78 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS08565 856ec3654826e1cef3edd81d4bf0e733 380 Gene3D G3DSA:3.40.800.20 32 367 1.9E-103 T 29-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AM474_RS26545 ec8cdbc833e756d36699ab3e1d6bdf7c 455 Pfam PF13520 Amino acid permease 15 423 5.0E-36 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS26545 ec8cdbc833e756d36699ab3e1d6bdf7c 455 PIRSF PIRSF006060 1 453 1.4E-55 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 Pfam PF01979 Amidohydrolase family 64 412 1.9E-68 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 SUPERFAMILY SSF51556 66 365 1.77E-94 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 SUPERFAMILY SSF51338 9 66 3.38E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 SUPERFAMILY SSF51338 364 438 3.38E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 Gene3D G3DSA:2.30.40.10 3 78 1.2E-10 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS05080 90ced376993022f571b94c57a2b69bb9 444 Gene3D G3DSA:3.20.20.140 79 364 5.1E-59 T 29-03-2018 AM474_RS16960 9dd0f07f794d904695c5e3f3ca6a8717 188 Gene3D G3DSA:3.90.79.10 5 188 1.5E-31 T 29-03-2018 AM474_RS16960 9dd0f07f794d904695c5e3f3ca6a8717 188 Pfam PF00293 NUDIX domain 48 164 1.5E-13 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS16960 9dd0f07f794d904695c5e3f3ca6a8717 188 SUPERFAMILY SSF55811 5 179 3.11E-36 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS16960 9dd0f07f794d904695c5e3f3ca6a8717 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS17695 0faa89f718bf1cf3cd4192941d60136e 382 Gene3D G3DSA:1.20.5.320 100 145 3.5E-12 T 29-03-2018 AM474_RS23335 3a15ffd8a91c2d05a56b933d295200bb 135 Pfam PF03724 META domain 28 129 2.9E-27 T 29-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AM474_RS01700 d57370af1df057af3ffa55922f07aa9e 196 Gene3D G3DSA:1.10.10.10 9 196 4.5E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS20380 6cfe3ecfaa6aaafc3bad882640be3026 493 Gene3D G3DSA:1.20.1600.10 39 490 7.9E-75 T 29-03-2018 AM474_RS20380 6cfe3ecfaa6aaafc3bad882640be3026 493 Pfam PF02321 Outer membrane efflux protein 294 480 4.7E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS20380 6cfe3ecfaa6aaafc3bad882640be3026 493 Pfam PF02321 Outer membrane efflux protein 51 270 1.3E-17 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS20380 6cfe3ecfaa6aaafc3bad882640be3026 493 SUPERFAMILY SSF56954 4 102 3.66E-64 T 29-03-2018 AM474_RS20380 6cfe3ecfaa6aaafc3bad882640be3026 493 SUPERFAMILY SSF56954 131 484 3.66E-64 T 29-03-2018 AM474_RS25570 1d9e8e3b2c8f42b132dca599cbfe8684 327 Pfam PF16220 Domain of unknown function (DUF4880) 22 63 9.2E-12 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS25570 1d9e8e3b2c8f42b132dca599cbfe8684 327 Pfam PF16344 Domain of unknown function (DUF4974) 227 305 2.6E-8 T 29-03-2018 IPR032508 Protein FecR, C-terminal AM474_RS25570 1d9e8e3b2c8f42b132dca599cbfe8684 327 Pfam PF04773 FecR protein 119 209 6.9E-19 T 29-03-2018 IPR006860 FecR protein AM474_RS25570 1d9e8e3b2c8f42b132dca599cbfe8684 327 PIRSF PIRSF018266 12 327 2.0E-90 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS22145 d95f89912edc9aec260d68829b49f241 200 Gene3D G3DSA:3.40.1620.10 5 54 8.8E-6 T 29-03-2018 AM474_RS22145 d95f89912edc9aec260d68829b49f241 200 Pfam PF05598 Transposase domain (DUF772) 93 143 5.3E-11 T 29-03-2018 IPR008490 Transposase InsH, N-terminal AM474_RS22145 d95f89912edc9aec260d68829b49f241 200 SUPERFAMILY SSF143120 8 51 3.01E-5 T 29-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AM474_RS03440 ba8b05dd8906d1bd307922a371b4c4f2 376 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 4 372 3.8E-152 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AM474_RS03440 ba8b05dd8906d1bd307922a371b4c4f2 376 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 4 372 4.4E-161 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AM474_RS03440 ba8b05dd8906d1bd307922a371b4c4f2 376 PIRSF PIRSF015557 1 376 2.7E-170 T 29-03-2018 IPR016633 Uncharacterised conserved protein UCP015557 AM474_RS27400 10c0eface90a32f8ef8c5cb50815992a 202 Gene3D G3DSA:2.30.110.10 13 191 2.7E-45 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS27400 10c0eface90a32f8ef8c5cb50815992a 202 SUPERFAMILY SSF50475 2 198 1.71E-43 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS27400 10c0eface90a32f8ef8c5cb50815992a 202 Pfam PF01613 Flavin reductase like domain 22 165 4.4E-18 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM474_RS27400 10c0eface90a32f8ef8c5cb50815992a 202 SMART SM00903 19 174 4.4E-16 T 29-03-2018 IPR002563 Flavin reductase like domain GO:0010181 AM474_RS20990 301d59a6aca6860fae0e2438b38218e6 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 1.5E-36 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM474_RS20990 301d59a6aca6860fae0e2438b38218e6 164 PIRSF PIRSF018472 2 164 7.6E-55 T 29-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type AM474_RS20990 301d59a6aca6860fae0e2438b38218e6 164 Pfam PF04093 rod shape-determining protein MreD 8 156 4.4E-40 T 29-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AM474_RS18615 957835d665c4a0f54fd4e21126257d3a 200 Gene3D G3DSA:3.40.50.620 25 162 6.8E-17 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18615 957835d665c4a0f54fd4e21126257d3a 200 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 61 4.9E-7 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS18615 957835d665c4a0f54fd4e21126257d3a 200 SUPERFAMILY SSF52374 27 177 8.13E-22 T 29-03-2018 AM474_RS18615 957835d665c4a0f54fd4e21126257d3a 200 Gene3D G3DSA:3.40.50.620 163 198 0.02 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS18615 957835d665c4a0f54fd4e21126257d3a 200 Pfam PF01467 Cytidylyltransferase-like 28 156 4.9E-6 T 29-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM474_RS23450 888050685b598e7589bb78ef08fc9d0f 345 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 20 247 6.9E-68 T 29-03-2018 IPR018642 Protein of unknown function DUF2066 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 Gene3D G3DSA:1.25.40.10 137 224 6.3E-9 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 Pfam PF07219 HemY protein N-terminus 27 131 1.2E-25 T 29-03-2018 IPR010817 HemY, N-terminal AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 SUPERFAMILY SSF48452 270 365 4.67E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 SUPERFAMILY SSF48452 92 187 4.67E-17 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 Gene3D G3DSA:1.25.40.10 227 401 4.0E-15 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 5 393 4.8E-107 T 29-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 AM474_RS16535 3fbb99c45f8402b6d22f0072347eeede 412 Gene3D G3DSA:1.25.40.10 31 136 3.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS18220 a9b28ffa75ac2dcc6d12d9fb96153074 110 SUPERFAMILY SSF103481 5 106 6.67E-20 T 29-03-2018 AM474_RS18220 a9b28ffa75ac2dcc6d12d9fb96153074 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.3E-25 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 ProSitePatterns PS00123 Alkaline phosphatase active site. 125 133 - T 29-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 SMART SM00098 69 475 2.1E-186 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 125 140 3.8E-47 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 225 235 3.8E-47 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 324 353 3.8E-47 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 68 88 3.8E-47 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 PRINTS PR00113 Alkaline phosphatase signature 162 182 3.8E-47 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 Gene3D G3DSA:3.40.720.10 30 476 5.8E-129 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 SUPERFAMILY SSF53649 40 474 2.45E-134 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 Pfam PF00245 Alkaline phosphatase 68 433 9.6E-118 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS05795 b080cf82cb8a0a8b2648e58ce670262b 476 Pfam PF00245 Alkaline phosphatase 435 473 5.7E-7 T 29-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AM474_RS20445 179f3dd3763c851417d90383821ad50c 184 Pfam PF08719 Domain of unknown function (DUF1768) 25 182 2.5E-52 T 29-03-2018 IPR012816 NADAR AM474_RS20445 179f3dd3763c851417d90383821ad50c 184 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 23 182 1.4E-49 T 29-03-2018 IPR012816 NADAR AM474_RS20445 179f3dd3763c851417d90383821ad50c 184 SUPERFAMILY SSF143990 19 183 1.57E-50 T 29-03-2018 AM474_RS19175 798e6e4f687a3eef33912d7c9b772b73 208 Gene3D G3DSA:1.20.950.20 1 208 5.1E-48 T 29-03-2018 AM474_RS19175 798e6e4f687a3eef33912d7c9b772b73 208 Pfam PF01292 Prokaryotic cytochrome b561 7 175 5.6E-21 T 29-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM474_RS19175 798e6e4f687a3eef33912d7c9b772b73 208 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 5 203 1.2E-60 T 29-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 AM474_RS19175 798e6e4f687a3eef33912d7c9b772b73 208 SUPERFAMILY SSF81342 3 206 1.41E-51 T 29-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM474_RS22075 59bd22079acb328c6403f46b487eaefb 319 PIRSF PIRSF018266 5 318 3.6E-71 T 29-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component AM474_RS22075 59bd22079acb328c6403f46b487eaefb 319 Pfam PF16220 Domain of unknown function (DUF4880) 17 57 1.5E-11 T 29-03-2018 IPR032623 FecR, N-terminal AM474_RS22075 59bd22079acb328c6403f46b487eaefb 319 Pfam PF04773 FecR protein 115 208 2.5E-14 T 29-03-2018 IPR006860 FecR protein AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 ProSitePatterns PS00483 Dihydroorotase signature 2. 307 318 - T 29-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 Pfam PF01979 Amidohydrolase family 231 425 3.6E-6 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 Pfam PF01979 Amidohydrolase family 51 125 6.0E-6 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 Gene3D G3DSA:3.20.20.140 71 389 1.7E-93 T 29-03-2018 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 Gene3D G3DSA:2.30.40.10 1 70 1.7E-16 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 SUPERFAMILY SSF51556 55 371 2.96E-91 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 SUPERFAMILY SSF51338 1 54 6.81E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS15035 fdd7d62ab617d24f8287b14a413d311c 445 SUPERFAMILY SSF51338 371 433 6.81E-25 T 29-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AM474_RS21895 31e6fba7a27dca3a9f1d3675c63f5601 416 Pfam PF13629 Pilus formation protein N terminal region 39 108 1.8E-19 T 29-03-2018 IPR032789 Pilus formation protein, N-terminal AM474_RS21895 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 353 8.9E-11 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS21895 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 358 372 8.9E-11 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS21895 31e6fba7a27dca3a9f1d3675c63f5601 416 PRINTS PR00811 Bacterial general secretion pathway protein D signature 205 229 8.9E-11 T 29-03-2018 IPR001775 GspD/PilQ family AM474_RS21895 31e6fba7a27dca3a9f1d3675c63f5601 416 Pfam PF00263 Bacterial type II and III secretion system protein 209 371 1.9E-43 T 29-03-2018 IPR004846 Type II/III secretion system GO:0009306 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 Pfam PF02974 Protease inhibitor Inh 31 128 2.3E-22 T 29-03-2018 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 ProDom PD015804 INHIBITOR PROTEASE METALLOPROTEASE PROTEINASE PRECURSOR SIGNAL PERIPLASMIC METALLOENZYME ALKALINE PRTA-SPECIFIC 38 125 7.0E-35 T 29-03-2018 IPR003086 Metalloprotease inhibitor I38 GO:0004866|GO:0030288 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 PRINTS PR01274 Metalloprotease inhibitor signature 26 42 5.9E-17 T 29-03-2018 IPR022815 Protease inhibitor I38 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 PRINTS PR01274 Metalloprotease inhibitor signature 68 79 5.9E-17 T 29-03-2018 IPR022815 Protease inhibitor I38 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 PRINTS PR01274 Metalloprotease inhibitor signature 90 103 5.9E-17 T 29-03-2018 IPR022815 Protease inhibitor I38 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 PRINTS PR01274 Metalloprotease inhibitor signature 107 120 5.9E-17 T 29-03-2018 IPR022815 Protease inhibitor I38 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 SUPERFAMILY SSF50882 26 128 3.14E-26 T 29-03-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 AM474_RS25305 d6b4256f6a28974b8744213ae741fe03 131 Gene3D G3DSA:2.40.128.10 32 128 2.1E-26 T 29-03-2018 AM474_RS31515 4d756d06b33931c371e95f2fbc889168 107 Gene3D G3DSA:1.10.10.10 2 81 3.1E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS31515 4d756d06b33931c371e95f2fbc889168 107 PIRSF PIRSF029502 1 98 1.8E-50 T 29-03-2018 IPR016921 Uncharacterised conserved protein UCP029502 AM474_RS31515 4d756d06b33931c371e95f2fbc889168 107 SUPERFAMILY SSF46785 6 74 2.66E-10 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12030 cd92d3cca96153096beeef67b38279cc 238 Gene3D G3DSA:3.40.50.880 1 217 2.0E-33 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS12030 cd92d3cca96153096beeef67b38279cc 238 Pfam PF00117 Glutamine amidotransferase class-I 41 181 2.6E-13 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS12030 cd92d3cca96153096beeef67b38279cc 238 SUPERFAMILY SSF52317 1 187 5.88E-51 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS28045 217175d01e9bcf3979553bcde32259dc 253 Gene3D G3DSA:3.90.70.10 57 205 4.1E-29 T 29-03-2018 AM474_RS28045 217175d01e9bcf3979553bcde32259dc 253 Pfam PF03412 Peptidase C39 family 57 192 2.5E-20 T 29-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 AM474_RS30655 a51cf3d189162d1c4ed6a66ad281df1f 247 Pfam PF07505 Protein of unknown function (DUF5131) 4 242 3.7E-99 T 29-03-2018 IPR011101 Protein of unknown function DUF5131 AM474_RS00625 c78f53dcbbe64b86bfa4838a03c97604 450 Pfam PF07044 Protein of unknown function (DUF1329) 82 423 7.9E-103 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS00625 c78f53dcbbe64b86bfa4838a03c97604 450 Gene3D G3DSA:2.50.20.10 160 441 8.2E-37 T 29-03-2018 AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 PRINTS PR01021 OMPA domain signature 95 110 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 PRINTS PR01021 OMPA domain signature 65 87 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 PRINTS PR01021 OMPA domain signature 110 126 1.6E-11 T 29-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 SUPERFAMILY SSF103088 52 165 3.79E-33 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 Pfam PF00691 OmpA family 65 159 1.3E-20 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24515 94798e883fe5bcc75e9a9ac9614a4dcb 168 Gene3D G3DSA:3.30.1330.60 31 168 2.4E-34 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 413 9.4E-118 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 SMART SM01329 30 414 1.7E-180 T 29-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 418 4.4E-225 T 29-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 29-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 SUPERFAMILY SSF53659 4 418 2.11E-147 T 29-03-2018 AM474_RS00955 828a72de93b4d9b6c49651aa56dd5585 418 Gene3D G3DSA:3.40.718.10 10 418 1.3E-132 T 29-03-2018 AM474_RS28520 3c2609fa20e51dc552e3f5b79ea1c739 762 Gene3D G3DSA:1.10.760.10 32 210 6.0E-4 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS28520 3c2609fa20e51dc552e3f5b79ea1c739 762 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 79 761 1.5E-288 T 29-03-2018 IPR010706 Fatty acid cis-trans isomerase AM474_RS04250 8f873f4603257b381908671416a89ad2 161 Gene3D G3DSA:3.40.50.300 43 161 1.5E-17 T 29-03-2018 AM474_RS04250 8f873f4603257b381908671416a89ad2 161 SUPERFAMILY SSF52540 45 159 1.59E-29 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04250 8f873f4603257b381908671416a89ad2 161 Pfam PF03846 Cell division inhibitor SulA 47 133 2.3E-8 T 29-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SMART SM00347 25 125 7.7E-24 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 SUPERFAMILY SSF46785 7 137 8.85E-31 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 7 136 1.5E-61 T 29-03-2018 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Pfam PF01047 MarR family 32 90 1.5E-15 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.6E-5 T 29-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AM474_RS10545 2c54ecfd0cd8260a5d79acda80ea9c5f 140 Gene3D G3DSA:1.10.10.10 1 140 2.0E-25 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS16605 5f797f6bec9ce3208ddc48b846ea1901 196 Pfam PF09335 SNARE associated Golgi protein 23 139 3.6E-18 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 SUPERFAMILY SSF53756 10 811 5.02E-301 T 29-03-2018 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 29-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 12 812 0.0 T 29-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 PIRSF PIRSF000460 3 812 3.9E-216 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 Gene3D G3DSA:3.40.50.2000 4 478 5.6E-187 T 29-03-2018 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 Pfam PF00343 Carbohydrate phosphorylase 100 812 3.3E-296 T 29-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 AM474_RS30050 6dda4af5a352b01c2791fc39d3d6202b 812 Gene3D G3DSA:3.40.50.2000 479 797 4.9E-115 T 29-03-2018 AM474_RS03060 5ff3d669d6a1edb7f1efafcbcad416d0 136 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 14 129 2.6E-42 T 29-03-2018 IPR021877 Protein of unknown function DUF3487 AM474_RS03060 5ff3d669d6a1edb7f1efafcbcad416d0 136 Gene3D G3DSA:1.20.1070.10 11 124 3.0E-4 T 29-03-2018 AM474_RS03060 5ff3d669d6a1edb7f1efafcbcad416d0 136 Pfam PF11990 Protein of unknown function (DUF3487) 12 130 1.2E-41 T 29-03-2018 IPR021877 Protein of unknown function DUF3487 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 Pfam PF00486 Transcriptional regulatory protein, C terminal 227 299 9.8E-17 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 Pfam PF00072 Response regulator receiver domain 81 187 4.3E-24 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 Gene3D G3DSA:1.10.10.10 200 305 3.8E-17 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 SMART SM00862 223 299 2.1E-13 T 29-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 Gene3D G3DSA:3.40.50.2300 64 199 1.2E-33 T 29-03-2018 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 SUPERFAMILY SSF52172 70 206 3.13E-35 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 SUPERFAMILY SSF46894 209 300 2.75E-19 T 29-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AM474_RS01285 a584e3fa7e308be968f01239d2d5c0b5 305 SMART SM00448 78 188 4.7E-35 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS11975 c0047c0cea17c48d9458016f4fc2ff0b 152 PIRSF PIRSF000027 7 152 6.8E-47 T 29-03-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 AM474_RS11975 c0047c0cea17c48d9458016f4fc2ff0b 152 SUPERFAMILY SSF47175 23 150 5.89E-33 T 29-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 AM474_RS11975 c0047c0cea17c48d9458016f4fc2ff0b 152 Pfam PF01322 Cytochrome C' 30 150 1.0E-31 T 29-03-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 AM474_RS11975 c0047c0cea17c48d9458016f4fc2ff0b 152 Gene3D G3DSA:1.20.120.10 26 152 1.6E-30 T 29-03-2018 AM474_RS06130 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 196 291 4.05E-16 T 29-03-2018 AM474_RS06130 ecad8bdf07de865f5e26470b660f87a8 292 SUPERFAMILY SSF103481 41 145 5.49E-15 T 29-03-2018 AM474_RS06130 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 154 286 1.1E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS06130 ecad8bdf07de865f5e26470b660f87a8 292 Pfam PF00892 EamA-like transporter family 13 141 1.1E-15 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 Gene3D G3DSA:1.10.287.950 176 254 7.3E-8 T 29-03-2018 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 456 5.7E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 SUPERFAMILY SSF58104 181 490 1.31E-77 T 29-03-2018 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 SMART SM00304 160 213 6.4E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 Pfam PF00672 HAMP domain 162 205 6.2E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 SMART SM00283 228 489 6.3E-72 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS03520 70988e75f7e4529dca6cd67e2f3ca0dd 490 Gene3D G3DSA:1.10.287.950 255 458 1.3E-53 T 29-03-2018 AM474_RS30815 aac0c679a3964adeec197ec4bfd08ab4 469 Pfam PF03023 MviN-like protein 30 443 1.9E-42 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS30815 aac0c679a3964adeec197ec4bfd08ab4 469 PRINTS PR01806 Virulence factor MviN signature 50 66 2.0E-10 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS30815 aac0c679a3964adeec197ec4bfd08ab4 469 PRINTS PR01806 Virulence factor MviN signature 248 274 2.0E-10 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS30815 aac0c679a3964adeec197ec4bfd08ab4 469 PRINTS PR01806 Virulence factor MviN signature 419 436 2.0E-10 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS30815 aac0c679a3964adeec197ec4bfd08ab4 469 PRINTS PR01806 Virulence factor MviN signature 31 50 2.0E-10 T 29-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM474_RS01840 7729388433337550c1fe802e9b919c53 397 Pfam PF14020 Protein of unknown function (DUF4236) 3 56 3.4E-22 T 29-03-2018 IPR025330 Domain of unknown function DUF4236 AM474_RS04525 ee72dd374ba3a5f532e4e6ffba15fd75 329 Gene3D G3DSA:1.25.40.10 212 308 1.9E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS04525 ee72dd374ba3a5f532e4e6ffba15fd75 329 Gene3D G3DSA:1.25.40.70 126 199 4.5E-4 T 29-03-2018 AM474_RS30205 6369f3d74099dcc5b75edc360bd907f7 116 Pfam PF11127 Protein of unknown function (DUF2892) 15 70 8.9E-8 T 29-03-2018 IPR021309 Protein of unknown function DUF2892 AM474_RS19240 a55ecc4debab994d958bdd6b9bba9191 242 Pfam PF04229 GrpB protein 22 182 5.8E-49 T 29-03-2018 IPR007344 GrpB/Dephospho-CoA kinase AM474_RS19240 a55ecc4debab994d958bdd6b9bba9191 242 SUPERFAMILY SSF81301 24 186 5.23E-46 T 29-03-2018 AM474_RS19240 a55ecc4debab994d958bdd6b9bba9191 242 Gene3D G3DSA:3.30.460.10 17 190 3.2E-51 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 Gene3D G3DSA:3.50.50.60 138 351 4.9E-32 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.8E-7 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.8E-7 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.8E-7 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 SUPERFAMILY SSF51905 2 319 3.98E-29 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 341 4.4E-60 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 Gene3D G3DSA:3.40.50.720 2 137 1.8E-12 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.9E-14 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 1.9E-14 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.9E-14 T 29-03-2018 AM474_RS20680 cd08265166fd4331af01d0814f0b7063 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 1.9E-14 T 29-03-2018 AM474_RS04270 33a0dc92cc54cefdac279e15357ed172 124 Pfam PF07866 Protein of unknown function (DUF1653) 44 103 4.6E-30 T 29-03-2018 IPR023387 DUF1653-like domain AM474_RS04270 33a0dc92cc54cefdac279e15357ed172 124 Gene3D G3DSA:2.30.30.320 33 117 3.3E-29 T 29-03-2018 IPR023387 DUF1653-like domain AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 336 2.1E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 2.1E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 490 2.1E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 2.1E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 2.1E-24 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 347 514 8.8E-32 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 Gene3D G3DSA:1.10.287.1060 248 325 0.044 T 29-03-2018 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 SUPERFAMILY SSF58104 239 548 1.06E-56 T 29-03-2018 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 Gene3D G3DSA:1.10.287.950 326 551 8.8E-42 T 29-03-2018 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 SMART SM00304 219 271 1.4E-10 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 Pfam PF00672 HAMP domain 220 266 2.8E-11 T 29-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 Gene3D G3DSA:1.20.120.30 25 191 2.0E-6 T 29-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain AM474_RS00405 0d602bd99655dbb1d1469fa12115cd75 552 SMART SM00283 286 547 5.8E-39 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 SUPERFAMILY SSF53850 23 523 7.06E-137 T 29-03-2018 AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 442 1.6E-87 T 29-03-2018 IPR000914 Solute-binding protein family 5 domain AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 Gene3D G3DSA:3.10.105.10 293 496 1.1E-53 T 29-03-2018 AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 PIRSF PIRSF002741 16 525 6.1E-102 T 29-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 Gene3D G3DSA:3.40.190.10 197 292 7.2E-25 T 29-03-2018 AM474_RS16225 aaddde34ac046f4f96ac8f59c7388e42 526 Gene3D G3DSA:3.90.76.10 31 196 2.2E-32 T 29-03-2018 AM474_RS21810 51ada6ab40ac544b67a7e892d9f7943e 326 Pfam PF01944 Stage II sporulation protein M 110 290 8.3E-36 T 29-03-2018 IPR002798 Stage II sporulation protein M-like AM474_RS29950 423df69b00916ee003ad1a83aa849713 170 Gene3D G3DSA:3.40.630.30 6 142 2.1E-9 T 29-03-2018 AM474_RS29950 423df69b00916ee003ad1a83aa849713 170 SUPERFAMILY SSF55729 34 137 7.39E-10 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS07200 2c55f1e2c6c94fe58d8482cd8b6e5f75 392 Gene3D G3DSA:1.20.1250.20 2 189 2.6E-29 T 29-03-2018 AM474_RS07200 2c55f1e2c6c94fe58d8482cd8b6e5f75 392 SUPERFAMILY SSF103473 3 389 3.4E-58 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS07200 2c55f1e2c6c94fe58d8482cd8b6e5f75 392 Pfam PF07690 Major Facilitator Superfamily 15 348 8.8E-37 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS07200 2c55f1e2c6c94fe58d8482cd8b6e5f75 392 Gene3D G3DSA:1.20.1250.20 196 391 3.3E-13 T 29-03-2018 AM474_RS07200 2c55f1e2c6c94fe58d8482cd8b6e5f75 392 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 380 1.4E-89 T 29-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 SUPERFAMILY SSF53850 24 260 2.48E-86 T 29-03-2018 AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 PIRSF PIRSF002854 1 260 3.4E-107 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 Pfam PF03180 NLPA lipoprotein 25 260 2.6E-102 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 Gene3D G3DSA:3.40.190.10 21 118 8.0E-27 T 29-03-2018 AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 Gene3D G3DSA:3.40.190.10 119 260 1.8E-57 T 29-03-2018 AM474_RS15220 c9bfda0e1c04096674c2c95f00bea88a 260 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 46 259 3.4E-69 T 29-03-2018 IPR004872 Lipoprotein NlpA family AM474_RS28940 21dcecb93ff72b9dd1db70ed9e426689 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 14 101 2.9E-26 T 29-03-2018 IPR018676 Protein of unknown function DUF2149 AM474_RS28055 9ff999ea237c57e0856a52572a614814 532 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 532 1.0E-150 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM474_RS28055 9ff999ea237c57e0856a52572a614814 532 Gene3D G3DSA:2.40.160.60 28 532 3.5E-64 T 29-03-2018 AM474_RS28055 9ff999ea237c57e0856a52572a614814 532 SUPERFAMILY SSF56935 130 532 7.33E-60 T 29-03-2018 AM474_RS28055 9ff999ea237c57e0856a52572a614814 532 SUPERFAMILY SSF56935 35 100 7.33E-60 T 29-03-2018 AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 SUPERFAMILY SSF47823 4 96 5.3E-19 T 29-03-2018 IPR010998 Integrase, Lambda-type, N-terminal AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 Gene3D G3DSA:1.10.150.130 2 109 3.0E-21 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 1.4E-23 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 SUPERFAMILY SSF56349 104 289 7.06E-52 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 291 57.648 T 29-03-2018 IPR023009 Tyrosine recombinase XerC/XerD AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 293 7.4E-109 T 29-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 Pfam PF00589 Phage integrase family 111 277 2.4E-42 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS16415 d097ea6dca9e0d0d69e6485369fd1946 303 Gene3D G3DSA:1.10.443.10 110 285 1.1E-44 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS07155 382e2586a745caa8c06a8491be6a5aed 100 Pfam PF01337 Barstar (barnase inhibitor) 13 90 5.0E-17 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS07155 382e2586a745caa8c06a8491be6a5aed 100 Gene3D G3DSA:3.30.370.10 9 97 1.0E-20 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS07155 382e2586a745caa8c06a8491be6a5aed 100 SUPERFAMILY SSF52038 11 94 4.05E-24 T 29-03-2018 IPR000468 Barstar (barnase inhibitor) AM474_RS29170 881604a873e0d15e7d297c48dbb1fffc 437 Pfam PF05525 Branched-chain amino acid transport protein 7 427 6.6E-157 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM474_RS29170 881604a873e0d15e7d297c48dbb1fffc 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 4.0E-164 T 29-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AM474_RS13625 624ed817f14cdeb5df6accf94e82eacc 133 SUPERFAMILY SSF69118 4 127 2.64E-38 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS13625 624ed817f14cdeb5df6accf94e82eacc 133 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 124 3.9E-59 T 29-03-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 AM474_RS13625 624ed817f14cdeb5df6accf94e82eacc 133 Gene3D G3DSA:1.20.1290.10 7 133 3.6E-37 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS13625 624ed817f14cdeb5df6accf94e82eacc 133 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 3.9E-24 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS12425 86df30bb3756ff04ec9b3a5e82fd38e6 733 Gene3D G3DSA:1.25.40.10 107 709 1.2E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS12425 86df30bb3756ff04ec9b3a5e82fd38e6 733 Pfam PF13515 Fusaric acid resistance protein-like 412 529 2.1E-21 T 29-03-2018 AM474_RS12425 86df30bb3756ff04ec9b3a5e82fd38e6 733 Pfam PF12805 FUSC-like inner membrane protein yccS 71 354 1.3E-114 T 29-03-2018 IPR032692 Integral membrane protein YccS, N-terminal AM474_RS12425 86df30bb3756ff04ec9b3a5e82fd38e6 733 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 715 3.1E-235 T 29-03-2018 IPR010019 Integral membrane protein, YccS AM474_RS12425 86df30bb3756ff04ec9b3a5e82fd38e6 733 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 717 0.0 T 29-03-2018 IPR010020 Integral membrane protein, YccS/YhfK AM474_RS26320 f4093488933362b2887723b91c1ed416 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 7 179 8.6E-44 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS26320 f4093488933362b2887723b91c1ed416 195 SUPERFAMILY SSF101327 9 181 2.48E-19 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS26320 f4093488933362b2887723b91c1ed416 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 181 2.3E-32 T 29-03-2018 IPR011978 Uncharacterised protein family UPF0149 AM474_RS24235 3cbd73cc73c643a2d3d774a501642052 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 2.6E-54 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS24235 3cbd73cc73c643a2d3d774a501642052 307 Gene3D G3DSA:1.10.3470.10 4 296 1.2E-48 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS07340 14db849b327a9e00f35bd9bd222e68d0 440 Pfam PF00324 Amino acid permease 13 361 1.9E-38 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS07340 14db849b327a9e00f35bd9bd222e68d0 440 PIRSF PIRSF006060 1 435 9.2E-69 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS19560 81075996d791d34250ee46b1137f5ce9 65 Pfam PF05532 CsbD-like 4 55 4.1E-20 T 29-03-2018 IPR008462 CsbD-like domain AM474_RS19560 81075996d791d34250ee46b1137f5ce9 65 Gene3D G3DSA:1.10.1470.10 1 65 3.6E-20 T 29-03-2018 IPR008462 CsbD-like domain AM474_RS19560 81075996d791d34250ee46b1137f5ce9 65 PIRSF PIRSF039008 1 65 4.2E-32 T 29-03-2018 IPR026042 Stress response protein YjbJ AM474_RS19560 81075996d791d34250ee46b1137f5ce9 65 SUPERFAMILY SSF69047 1 64 3.79E-25 T 29-03-2018 IPR008462 CsbD-like domain AM474_RS09670 ec9ef918c9b63adb78138d1cbdb2a714 488 Gene3D G3DSA:1.10.150.130 76 207 8.9E-4 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS09670 ec9ef918c9b63adb78138d1cbdb2a714 488 Pfam PF00589 Phage integrase family 232 457 4.3E-8 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS09670 ec9ef918c9b63adb78138d1cbdb2a714 488 Gene3D G3DSA:1.10.443.10 222 474 1.9E-21 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS09670 ec9ef918c9b63adb78138d1cbdb2a714 488 SUPERFAMILY SSF56349 131 463 1.68E-15 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 Gene3D G3DSA:3.30.700.10 7 179 2.7E-35 T 29-03-2018 AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.9E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 SUPERFAMILY SSF54523 7 178 1.78E-23 T 29-03-2018 AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 Pfam PF00114 Pilin (bacterial filament) 36 179 1.1E-13 T 29-03-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 AM474_RS20745 a3d65ffce1685588eb6ec0ee2be8cb54 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 1.4E-10 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS24625 da8bdb32621162081d376489cc62a711 278 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 6.8E-117 T 29-03-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS24625 da8bdb32621162081d376489cc62a711 278 Gene3D G3DSA:2.60.120.10 9 272 7.5E-50 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS24625 da8bdb32621162081d376489cc62a711 278 SUPERFAMILY SSF51182 10 272 7.89E-86 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS24625 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 195 252 1.5E-7 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS24625 da8bdb32621162081d376489cc62a711 278 Pfam PF07883 Cupin domain 72 141 9.4E-13 T 29-03-2018 IPR013096 Cupin 2, conserved barrel AM474_RS17195 5f18d1a974ae4e9a95cf87b9f46ed0dd 428 Gene3D G3DSA:1.20.5.730 24 107 1.0E-7 T 29-03-2018 AM474_RS17195 5f18d1a974ae4e9a95cf87b9f46ed0dd 428 SUPERFAMILY SSF51261 239 424 9.42E-47 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS17195 5f18d1a974ae4e9a95cf87b9f46ed0dd 428 Gene3D G3DSA:2.70.70.10 171 428 3.6E-35 T 29-03-2018 AM474_RS17195 5f18d1a974ae4e9a95cf87b9f46ed0dd 428 Pfam PF01551 Peptidase family M23 327 420 4.1E-25 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS24465 5ffc733f70126d1719019e5e55319ca9 382 Gene3D G3DSA:2.120.10.30 22 284 6.2E-48 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS24465 5ffc733f70126d1719019e5e55319ca9 382 Gene3D G3DSA:2.120.10.30 285 374 2.2E-16 T 29-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM474_RS24465 5ffc733f70126d1719019e5e55319ca9 382 Pfam PF07995 Glucose / Sorbosone dehydrogenase 46 377 8.7E-138 T 29-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase AM474_RS24465 5ffc733f70126d1719019e5e55319ca9 382 SUPERFAMILY SSF50952 37 379 2.75E-45 T 29-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 3.4E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 360 382 3.4E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 3.4E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 3.4E-9 T 29-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 Pfam PF00361 Proton-conducting membrane transporter 136 427 1.4E-90 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 5.6E-22 T 29-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 5.7E-55 T 29-03-2018 AM474_RS01080 f16df82f3a59b29614bf2fbb59cb80a1 615 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 612 1.0E-229 T 29-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS31455 5e2a46f66b8a8c33835b12605aeb4fe2 355 Pfam PF14891 Effector protein 239 325 7.4E-8 T 29-03-2018 IPR028208 Effector protein NleD-like AM474_RS31455 5e2a46f66b8a8c33835b12605aeb4fe2 355 Gene3D G3DSA:3.90.1240.10 26 308 2.6E-39 T 29-03-2018 AM474_RS17165 441e4340d31d66c3f3c176b22162d459 248 SUPERFAMILY SSF53850 25 248 3.1E-37 T 29-03-2018 AM474_RS17165 441e4340d31d66c3f3c176b22162d459 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 248 7.2E-21 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS17165 441e4340d31d66c3f3c176b22162d459 248 Gene3D G3DSA:3.40.190.10 19 172 3.4E-17 T 29-03-2018 AM474_RS17165 441e4340d31d66c3f3c176b22162d459 248 Gene3D G3DSA:3.40.190.10 173 248 1.8E-5 T 29-03-2018 AM474_RS20070 fada1355f725b71ce41c4410b2adf356 180 Pfam PF05229 Spore Coat Protein U domain 29 177 6.2E-33 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20070 fada1355f725b71ce41c4410b2adf356 180 SMART SM00972 116 177 1.7E-18 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20070 fada1355f725b71ce41c4410b2adf356 180 Gene3D G3DSA:2.60.40.1090 30 180 7.9E-7 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS01550 424ffc98b6a7ad2bb41350421b7621bc 286 Pfam PF13280 WYL domain 117 187 1.3E-9 T 29-03-2018 IPR026881 WYL domain AM474_RS01550 424ffc98b6a7ad2bb41350421b7621bc 286 PIRSF PIRSF015558 1 282 2.5E-72 T 29-03-2018 IPR016634 WYL domain protein, s026 type AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 SUPERFAMILY SSF46626 54 124 2.4E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 Gene3D G3DSA:1.10.760.10 53 128 4.9E-10 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 PRINTS PR00607 Class IE cytochrome C signature 59 70 4.3E-7 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 PRINTS PR00607 Class IE cytochrome C signature 113 124 4.3E-7 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 PRINTS PR00607 Class IE cytochrome C signature 70 80 4.3E-7 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 PRINTS PR00607 Class IE cytochrome C signature 98 110 4.3E-7 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16170 ce2cb4990e84209c3374f3c5e5ee7eb8 129 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 51 123 4.5E-15 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS14575 5dd897a539f32cd4d401de6d3b22870a 228 SUPERFAMILY SSF52964 49 146 6.02E-10 T 29-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM474_RS14575 5dd897a539f32cd4d401de6d3b22870a 228 Pfam PF03783 Curli production assembly/transport component CsgG 48 225 1.2E-30 T 29-03-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 AM474_RS14575 5dd897a539f32cd4d401de6d3b22870a 228 Gene3D G3DSA:3.40.50.10070 43 185 2.7E-20 T 29-03-2018 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 39.239 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 Pfam PF01227 GTP cyclohydrolase I 6 182 5.6E-76 T 29-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 SUPERFAMILY SSF55620 5 183 9.64E-79 T 29-03-2018 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 Gene3D G3DSA:1.10.286.10 3 51 1.4E-20 T 29-03-2018 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 1.8E-77 T 29-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 110 120 - T 29-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM474_RS06585 aec38e6dd15db2fcc1d17f681e767d7a 186 Gene3D G3DSA:3.30.1130.10 53 185 1.1E-63 T 29-03-2018 AM474_RS01380 b3cc4567cdec2fa02c23d411c6673899 393 Pfam PF05762 VWA domain containing CoxE-like protein 187 272 2.4E-9 T 29-03-2018 IPR008912 Uncharacterised protein family CoxE-like AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 Gene3D G3DSA:1.10.10.60 251 296 4.8E-14 T 29-03-2018 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 SMART SM00342 214 296 2.6E-30 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 292 - T 29-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 SUPERFAMILY SSF46689 250 296 3.05E-9 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 SUPERFAMILY SSF46689 198 248 5.29E-8 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 Pfam PF12833 Helix-turn-helix domain 220 296 1.1E-21 T 29-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AM474_RS10990 c28af269655c9cc260abb5c342803b73 296 Gene3D G3DSA:1.10.10.60 195 250 2.8E-10 T 29-03-2018 AM474_RS15105 b20479557005c914587e70b6a5cc4a1a 285 SUPERFAMILY SSF54427 159 283 1.58E-5 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS15105 b20479557005c914587e70b6a5cc4a1a 285 SMART SM00978 153 284 2.0E-19 T 29-03-2018 IPR007379 Tim44-like domain AM474_RS15105 b20479557005c914587e70b6a5cc4a1a 285 Pfam PF04280 Tim44-like domain 162 283 4.8E-8 T 29-03-2018 IPR007379 Tim44-like domain AM474_RS16950 f42976a0d8f0e49d7d56c3b8903e4320 145 SMART SM00257 95 144 5.6E-10 T 29-03-2018 IPR018392 LysM domain AM474_RS16950 f42976a0d8f0e49d7d56c3b8903e4320 145 SUPERFAMILY SSF54106 94 144 9.16E-7 T 29-03-2018 IPR018392 LysM domain AM474_RS16950 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF01476 LysM domain 96 144 1.1E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS16950 f42976a0d8f0e49d7d56c3b8903e4320 145 Gene3D G3DSA:3.10.350.10 89 145 4.3E-15 T 29-03-2018 AM474_RS16950 f42976a0d8f0e49d7d56c3b8903e4320 145 Pfam PF04972 BON domain 22 87 5.5E-13 T 29-03-2018 IPR007055 BON domain AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 1.5E-82 T 29-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.0E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS26360 a330790c31a5e4dcbb607e204d52a949 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 7.8E-68 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS07925 c26378261871623d3e0a365bd16fcdda 620 Pfam PF13450 NAD(P)-binding Rossmann-like domain 78 137 8.8E-13 T 29-03-2018 AM474_RS07925 c26378261871623d3e0a365bd16fcdda 620 Gene3D G3DSA:3.50.50.60 70 620 3.6E-23 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07925 c26378261871623d3e0a365bd16fcdda 620 SUPERFAMILY SSF51905 67 160 8.3E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS07925 c26378261871623d3e0a365bd16fcdda 620 SUPERFAMILY SSF51905 350 441 8.3E-24 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS09215 ac499d51e4590e2b24aee5effaadb9dd 300 SUPERFAMILY SSF103481 184 288 3.92E-11 T 29-03-2018 AM474_RS09215 ac499d51e4590e2b24aee5effaadb9dd 300 Pfam PF00892 EamA-like transporter family 150 285 1.2E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS09215 ac499d51e4590e2b24aee5effaadb9dd 300 Pfam PF00892 EamA-like transporter family 5 134 1.9E-11 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS09215 ac499d51e4590e2b24aee5effaadb9dd 300 SUPERFAMILY SSF103481 35 137 3.47E-13 T 29-03-2018 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 SUPERFAMILY SSF46785 4 87 2.06E-15 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 Pfam PF03466 LysR substrate binding domain 87 282 2.2E-14 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 Gene3D G3DSA:1.10.10.10 1 85 1.2E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 SUPERFAMILY SSF53850 88 283 5.79E-17 T 29-03-2018 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-5 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.6E-13 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS03230 c21b8856ac8e8e75ceb957b107b6b4e8 313 Gene3D G3DSA:3.40.190.10 86 196 1.6E-10 T 29-03-2018 AM474_RS12985 8b8cff69ba41d16566967324e7a8faf6 383 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 60 374 1.1E-50 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM474_RS12985 8b8cff69ba41d16566967324e7a8faf6 383 SUPERFAMILY SSF51695 55 380 6.8E-77 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS12985 8b8cff69ba41d16566967324e7a8faf6 383 Gene3D G3DSA:3.20.20.190 39 383 3.1E-69 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS04450 e5442117c9c1700bb6b15fab40186e85 114 Pfam PF04320 Protein with unknown function (DUF469) 7 105 3.3E-36 T 29-03-2018 IPR007416 Protein of unknown function DUF469 AM474_RS28160 787f31e590fe7ea257c42f5f291aae53 231 SUPERFAMILY SSF49899 2 230 7.91E-74 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM474_RS28160 787f31e590fe7ea257c42f5f291aae53 231 Pfam PF08787 Alginate lyase 2 230 4.9E-61 T 29-03-2018 IPR014895 Alginate lyase 2 AM474_RS28160 787f31e590fe7ea257c42f5f291aae53 231 Gene3D G3DSA:2.60.120.200 2 231 4.0E-63 T 29-03-2018 AM474_RS04895 0829b5f29f23c47b99e56e7450562125 285 Gene3D G3DSA:3.40.50.1820 46 285 8.0E-32 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS04895 0829b5f29f23c47b99e56e7450562125 285 Pfam PF12146 Serine aminopeptidase, S33 68 177 9.0E-12 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS04895 0829b5f29f23c47b99e56e7450562125 285 SUPERFAMILY SSF53474 58 252 2.8E-33 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15175 5d4d81c6840cdee9ce8adf2ecb92a902 262 Gene3D G3DSA:3.40.710.10 19 257 1.5E-27 T 29-03-2018 AM474_RS15175 5d4d81c6840cdee9ce8adf2ecb92a902 262 SUPERFAMILY SSF56601 34 251 7.7E-36 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS15175 5d4d81c6840cdee9ce8adf2ecb92a902 262 Pfam PF00905 Penicillin binding protein transpeptidase domain 55 249 6.6E-25 T 29-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM474_RS27865 5fdf294a3d87cec98182cf4645218598 232 SUPERFAMILY SSF52317 4 193 2.06E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS27865 5fdf294a3d87cec98182cf4645218598 232 Gene3D G3DSA:3.40.50.880 2 230 3.0E-45 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS27865 5fdf294a3d87cec98182cf4645218598 232 Pfam PF00117 Glutamine amidotransferase class-I 24 178 2.7E-16 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS01155 75199ee739f06017818ceb95cd4b75f8 88 ProDom PD031420 YFEK EXPORTED PRECURSOR SIGNAL PERIPLASMIC ECS3291 XCC0326 1 68 5.0E-18 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AM474_RS01155 75199ee739f06017818ceb95cd4b75f8 88 Pfam PF17263 Family of unknown function (DUF5329) 1 85 5.6E-33 T 29-03-2018 IPR035242 Protein of unknown function DUF5329 AM474_RS09515 c66535535e1005efa870161cf3f674c3 167 Pfam PF01936 NYN domain 11 159 5.0E-35 T 29-03-2018 IPR021139 NYN domain, limkain-b1-type AM474_RS09515 c66535535e1005efa870161cf3f674c3 167 Gene3D G3DSA:3.40.50.1010 2 165 5.2E-33 T 29-03-2018 IPR029060 PIN domain-like AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 273 6.4E-74 T 29-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 477 655 5.0E-50 T 29-03-2018 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 8 726 0.0 T 29-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 165 284 4.0E-33 T 29-03-2018 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 7 153 1.7E-28 T 29-03-2018 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Gene3D G3DSA:3.40.50.300 285 386 1.7E-28 T 29-03-2018 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 2.2E-75 T 29-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM474_RS15540 67085dc386538c302a490c08e3b375ca 728 SUPERFAMILY SSF52540 9 644 3.46E-184 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS12875 9eee3c65a8903cc45b5486f0d11731af 136 Pfam PF00583 Acetyltransferase (GNAT) family 40 119 7.1E-8 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS12875 9eee3c65a8903cc45b5486f0d11731af 136 Gene3D G3DSA:3.40.630.30 10 131 1.8E-18 T 29-03-2018 AM474_RS12875 9eee3c65a8903cc45b5486f0d11731af 136 SUPERFAMILY SSF55729 12 119 1.06E-16 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS14710 4a408434e71a5c5602376290f26e81cd 307 SUPERFAMILY SSF53850 22 295 9.45E-81 T 29-03-2018 AM474_RS14710 4a408434e71a5c5602376290f26e81cd 307 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 279 3.7E-55 T 29-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AM474_RS14710 4a408434e71a5c5602376290f26e81cd 307 Gene3D G3DSA:3.40.190.100 124 239 1.7E-34 T 29-03-2018 AM474_RS14710 4a408434e71a5c5602376290f26e81cd 307 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 305 2.0E-127 T 29-03-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 AM474_RS14710 4a408434e71a5c5602376290f26e81cd 307 Gene3D G3DSA:3.40.190.10 16 123 5.5E-11 T 29-03-2018 AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 Gene3D G3DSA:2.40.100.10 17 187 1.3E-50 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 2.4E-8 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 2.4E-8 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 2.4E-8 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 185 1.2E-47 T 29-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 SUPERFAMILY SSF50891 25 185 9.06E-57 T 29-03-2018 IPR029000 Cyclophilin-like domain AM474_RS05415 3772181c9567c67c5e7c11d603147db1 187 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 29-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AM474_RS07045 e079fd0b4b1ab007c83369a0b52242ea 490 Gene3D G3DSA:2.40.160.20 38 417 0.0038 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS07045 e079fd0b4b1ab007c83369a0b52242ea 490 Pfam PF13372 Alginate export 39 485 2.7E-117 T 29-03-2018 IPR025388 Alginate export domain AM474_RS22945 6a2d8107503f83561f39d3b5ba7b694e 182 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 101 158 4.8E-21 T 29-03-2018 IPR018637 Domain of unknown function DUF2059 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 SUPERFAMILY SSF47203 232 385 9.18E-53 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Gene3D G3DSA:2.40.110.10 129 223 1.5E-29 T 29-03-2018 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 4.6E-15 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 221 3.1E-16 T 29-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Gene3D G3DSA:1.20.140.10 224 390 3.4E-53 T 29-03-2018 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 SUPERFAMILY SSF56645 1 245 2.23E-57 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.6E-44 T 29-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 29-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AM474_RS30445 58d4aae81bf7826fe668527e35476025 390 Gene3D G3DSA:1.10.540.10 1 128 2.0E-25 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS02670 35415cd9956167d4ef06a302b862ec5f 259 PIRSF PIRSF006648 2 255 4.3E-23 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS02670 35415cd9956167d4ef06a302b862ec5f 259 Pfam PF01061 ABC-2 type transporter 13 221 2.2E-39 T 29-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AM474_RS02670 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 5.6E-9 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS02670 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.6E-9 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS02670 35415cd9956167d4ef06a302b862ec5f 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 5.6E-9 T 29-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AM474_RS03990 af553133af67f33c3b8be1f179b2e740 377 Gene3D G3DSA:3.90.1150.10 270 377 1.6E-22 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS03990 af553133af67f33c3b8be1f179b2e740 377 Pfam PF00266 Aminotransferase class-V 16 348 5.7E-52 T 29-03-2018 IPR000192 Aminotransferase class V domain AM474_RS03990 af553133af67f33c3b8be1f179b2e740 377 SUPERFAMILY SSF53383 7 374 1.89E-80 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS03990 af553133af67f33c3b8be1f179b2e740 377 Gene3D G3DSA:3.40.640.10 26 269 1.2E-41 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS15615 26893143945bd87a293f355c412e6dd0 404 Pfam PF04143 Sulphur transport 54 380 1.0E-79 T 29-03-2018 IPR007272 Sulphur transport domain AM474_RS10010 53aa5ab28db4fb797f7fcd4cd76444ea 527 Gene3D G3DSA:1.10.510.10 320 497 1.4E-7 T 29-03-2018 AM474_RS10010 53aa5ab28db4fb797f7fcd4cd76444ea 527 SUPERFAMILY SSF56112 282 490 3.92E-11 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS30130 41e585346795f233936b277ae92f32cf 138 SUPERFAMILY SSF54631 1 117 8.09E-30 T 29-03-2018 AM474_RS30130 41e585346795f233936b277ae92f32cf 138 Gene3D G3DSA:3.20.20.70 1 128 7.7E-24 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS30130 41e585346795f233936b277ae92f32cf 138 SMART SM00116 74 122 0.0016 T 29-03-2018 IPR000644 CBS domain AM474_RS30130 41e585346795f233936b277ae92f32cf 138 SMART SM00116 10 57 0.0019 T 29-03-2018 IPR000644 CBS domain AM474_RS30130 41e585346795f233936b277ae92f32cf 138 Pfam PF00571 CBS domain 3 53 1.2E-10 T 29-03-2018 IPR000644 CBS domain AM474_RS30130 41e585346795f233936b277ae92f32cf 138 Pfam PF00571 CBS domain 68 119 4.5E-8 T 29-03-2018 IPR000644 CBS domain AM474_RS28185 e09c8ce7ff404370850209cb3630360c 155 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 3.9E-15 T 29-03-2018 IPR010710 Protein of unknown function DUF1289 AM474_RS15745 ed19d0d9c30b956bce255f16bb009346 110 Gene3D G3DSA:1.20.1170.10 12 109 4.2E-5 T 29-03-2018 AM474_RS22255 8afa5413d41995d1d415601b0e5e3396 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 8.9E-10 T 29-03-2018 AM474_RS22255 8afa5413d41995d1d415601b0e5e3396 168 Gene3D G3DSA:3.40.630.30 1 156 1.7E-21 T 29-03-2018 AM474_RS22255 8afa5413d41995d1d415601b0e5e3396 168 SUPERFAMILY SSF55729 1 148 8.41E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS02925 8b96403dffd72dcf81b233a7cdb62b2a 275 Pfam PF06067 Domain of unknown function (DUF932) 37 264 2.0E-61 T 29-03-2018 IPR026325 Protein of unknown function DUF932 AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 10 248 1.3E-98 T 29-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 Gene3D G3DSA:3.40.50.300 6 263 3.8E-57 T 29-03-2018 AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 SUPERFAMILY SSF52540 10 241 2.2E-55 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 SMART SM00382 36 236 1.6E-8 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS09590 b2d092635abfd0ed2034e6eb570c2b7f 275 Pfam PF00005 ABC transporter 27 180 3.2E-28 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS11390 4b5237f9907f2f6750c9cc80a66d93f1 278 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 265 36.629 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM474_RS11390 4b5237f9907f2f6750c9cc80a66d93f1 278 Gene3D G3DSA:3.20.20.70 13 266 4.0E-71 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS11390 4b5237f9907f2f6750c9cc80a66d93f1 278 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 29-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AM474_RS11390 4b5237f9907f2f6750c9cc80a66d93f1 278 SUPERFAMILY SSF51366 14 265 2.0E-86 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS11390 4b5237f9907f2f6750c9cc80a66d93f1 278 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 263 4.5E-101 T 29-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AM474_RS19220 1edafbaafa40d48d54aa95619256ef0b 240 Gene3D G3DSA:3.60.110.10 2 238 6.1E-48 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS19220 1edafbaafa40d48d54aa95619256ef0b 240 SUPERFAMILY SSF56317 4 234 1.31E-46 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS19220 1edafbaafa40d48d54aa95619256ef0b 240 Pfam PF00795 Carbon-nitrogen hydrolase 4 231 1.0E-23 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 366 375 - T 29-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 Gene3D G3DSA:1.10.630.10 4 424 6.3E-65 T 29-03-2018 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 SUPERFAMILY SSF48264 25 423 4.71E-78 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 343 358 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 373 384 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 298 309 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 103 114 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 167 182 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 315 342 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00359 B-class P450 signature 364 373 2.0E-25 T 29-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 Pfam PF00067 Cytochrome P450 61 391 5.4E-33 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00385 P450 superfamily signature 263 280 6.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00385 P450 superfamily signature 298 309 6.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00385 P450 superfamily signature 373 384 6.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS00295 ab4501bdebc635f7f426fdbcfc3b8099 424 PRINTS PR00385 P450 superfamily signature 364 373 6.3E-5 T 29-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Gene3D G3DSA:3.40.50.980 41 219 4.9E-31 T 29-03-2018 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Pfam PF00501 AMP-binding enzyme 48 475 1.1E-57 T 29-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Gene3D G3DSA:2.30.38.10 379 458 0.0014 T 29-03-2018 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Gene3D G3DSA:3.40.50.980 220 377 1.4E-32 T 29-03-2018 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 SUPERFAMILY SSF56801 18 572 2.62E-96 T 29-03-2018 AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 29-03-2018 IPR020845 AMP-binding, conserved site AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 560 2.0E-10 T 29-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain AM474_RS03650 c89c1b9501daf7844768139efea7e705 608 Gene3D G3DSA:3.30.300.30 470 579 5.0E-16 T 29-03-2018 AM474_RS07765 75b5b68891a009d8a644b4d7b9446843 231 Pfam PF06904 Extensin-like protein C-terminus 60 231 4.4E-60 T 29-03-2018 IPR009683 Extensin-like, C-terminal AM474_RS19135 e194db4865be5c4fb9f44b84d0f0340b 164 Pfam PF03692 Putative zinc- or iron-chelating domain 59 155 7.6E-16 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 47 59 1.3E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 PRINTS PR00618 DksA/TraR zinc finger signature 35 46 1.3E-5 T 29-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 33 65 1.2E-13 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 6.2E-17 T 29-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS11565 7c3409f527b9c1f2ec8bb6c18745363b 66 SUPERFAMILY SSF57716 35 65 3.42E-7 T 29-03-2018 AM474_RS24660 d3be43b7f2f88d874acb0c7b28f64679 496 PIRSF PIRSF006060 9 487 2.9E-54 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS24660 d3be43b7f2f88d874acb0c7b28f64679 496 Pfam PF13520 Amino acid permease 27 463 1.9E-40 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS18015 8357f7c1d6d4fd8fd6f2568ec46ad55f 255 Pfam PF13614 AAA domain 5 183 2.7E-37 T 29-03-2018 IPR025669 AAA domain AM474_RS18015 8357f7c1d6d4fd8fd6f2568ec46ad55f 255 SUPERFAMILY SSF52540 1 254 1.72E-50 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS18015 8357f7c1d6d4fd8fd6f2568ec46ad55f 255 Gene3D G3DSA:3.40.50.300 2 255 7.9E-50 T 29-03-2018 AM474_RS02460 eede35b3c5e9da26d8566a804ee35f49 190 Gene3D G3DSA:1.10.3600.10 9 120 2.7E-22 T 29-03-2018 IPR009364 Putative bacterial toxin ydaT AM474_RS16045 e96ab0c7d565ec651f19659a98f9353f 133 Pfam PF03928 Haem-degrading 10 129 4.8E-30 T 29-03-2018 IPR005624 Haem-degrading AM474_RS16045 e96ab0c7d565ec651f19659a98f9353f 133 SUPERFAMILY SSF143744 2 131 1.18E-34 T 29-03-2018 AM474_RS15405 20425480fc748a266c296d11ba0fa5ff 204 SUPERFAMILY SSF75620 3 196 6.15E-43 T 29-03-2018 AM474_RS15405 20425480fc748a266c296d11ba0fa5ff 204 TIGRFAM TIGR03072 release_prfH: putative peptide chain release factor H 2 201 7.4E-98 T 29-03-2018 IPR017509 Putative peptide chain release factor H AM474_RS15405 20425480fc748a266c296d11ba0fa5ff 204 Pfam PF00472 RF-1 domain 107 191 1.4E-22 T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS15405 20425480fc748a266c296d11ba0fa5ff 204 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 115 131 - T 29-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM474_RS15405 20425480fc748a266c296d11ba0fa5ff 204 Gene3D G3DSA:3.30.160.20 102 182 2.3E-23 T 29-03-2018 AM474_RS27295 01780305c437c45b317ff18ba28b8eae 268 Pfam PF16234 Domain of unknown function (DUF4892) 20 201 4.0E-98 T 29-03-2018 IPR032608 Protein of unknown function DUF4892 AM474_RS30500 ac92e42938ba863a8d13ebab8699cebe 291 Pfam PF00561 alpha/beta hydrolase fold 26 273 2.8E-20 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS30500 ac92e42938ba863a8d13ebab8699cebe 291 SUPERFAMILY SSF53474 8 276 6.68E-53 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS30500 ac92e42938ba863a8d13ebab8699cebe 291 Gene3D G3DSA:3.40.50.1820 9 283 4.7E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS06530 2261e3df34201f6109a9f5968da033bc 256 Gene3D G3DSA:3.90.226.10 1 256 1.9E-65 T 29-03-2018 AM474_RS06530 2261e3df34201f6109a9f5968da033bc 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 29-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 AM474_RS06530 2261e3df34201f6109a9f5968da033bc 256 SUPERFAMILY SSF52096 3 252 1.53E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS06530 2261e3df34201f6109a9f5968da033bc 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 246 9.3E-41 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS10370 99ff47a9754041447ea6046bdf1124d4 419 Pfam PF07690 Major Facilitator Superfamily 18 362 1.7E-47 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS10370 99ff47a9754041447ea6046bdf1124d4 419 Gene3D G3DSA:1.20.1250.20 208 401 9.1E-28 T 29-03-2018 AM474_RS10370 99ff47a9754041447ea6046bdf1124d4 419 SUPERFAMILY SSF103473 9 400 2.75E-74 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS10370 99ff47a9754041447ea6046bdf1124d4 419 Gene3D G3DSA:1.20.1250.20 4 207 1.8E-37 T 29-03-2018 AM474_RS28380 b436edddca6e03cc03debeaebb0e9fec 500 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 5 497 1.9E-227 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM474_RS28380 b436edddca6e03cc03debeaebb0e9fec 500 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 500 320.843 T 29-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 AM474_RS18860 e05d4c546adf3c4a0a06a99f97cdde57 220 Pfam PF01844 HNH endonuclease 60 104 5.4E-6 T 29-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AM474_RS18860 e05d4c546adf3c4a0a06a99f97cdde57 220 SMART SM00507 49 103 0.0086 T 29-03-2018 IPR003615 HNH nuclease AM474_RS18860 e05d4c546adf3c4a0a06a99f97cdde57 220 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 44 167 1.2E-16 T 29-03-2018 IPR013467 Conserved hypothetical protein CHP02646 AM474_RS18860 e05d4c546adf3c4a0a06a99f97cdde57 220 Gene3D G3DSA:3.40.1800.10 38 112 3.0E-12 T 29-03-2018 AM474_RS04105 7b60f349e2edc62aff1b7b793a8b2503 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.286 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM474_RS04105 7b60f349e2edc62aff1b7b793a8b2503 61 Gene3D G3DSA:2.20.25.10 8 61 4.9E-21 T 29-03-2018 AM474_RS04105 7b60f349e2edc62aff1b7b793a8b2503 61 SUPERFAMILY SSF158997 1 54 1.05E-20 T 29-03-2018 AM474_RS04105 7b60f349e2edc62aff1b7b793a8b2503 61 Pfam PF03966 Trm112p-like protein 2 41 4.1E-10 T 29-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 208 2.4E-62 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 221 56.246 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 PIRSF PIRSF006293 2 224 3.1E-79 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Pfam PF06508 Queuosine biosynthesis protein QueC 5 215 5.9E-80 T 29-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 SUPERFAMILY SSF52402 4 223 3.97E-64 T 29-03-2018 AM474_RS23615 311bb5ec4c213fbcc0a5b392e4ae3bf2 224 Gene3D G3DSA:3.40.50.620 2 224 4.7E-51 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS23580 837454363ec04cbb9713d3f1c6e376c8 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 4.3E-44 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS23580 837454363ec04cbb9713d3f1c6e376c8 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 5.0E-91 T 29-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 AM474_RS17605 219f1b5db22fa4910ebfc45316e57a74 123 Pfam PF06155 Protein of unknown function (DUF971) 7 88 2.3E-23 T 29-03-2018 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 AM474_RS08380 954b6b5729b9c9ce1c9b009b03e8928b 398 SUPERFAMILY SSF103473 5 387 5.36E-40 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS08380 954b6b5729b9c9ce1c9b009b03e8928b 398 Gene3D G3DSA:1.20.1250.20 202 395 3.1E-21 T 29-03-2018 AM474_RS08380 954b6b5729b9c9ce1c9b009b03e8928b 398 Pfam PF07690 Major Facilitator Superfamily 220 391 3.5E-13 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS08380 954b6b5729b9c9ce1c9b009b03e8928b 398 Gene3D G3DSA:1.20.1250.20 4 201 4.6E-17 T 29-03-2018 AM474_RS27370 7c942c88f9a8969762cb8236487c3e39 201 Pfam PF16233 Domain of unknown function (DUF4893) 67 176 9.7E-22 T 29-03-2018 IPR032609 Protein of unknown function DUF4893 AM474_RS02140 a7337a5713352270f9154eb02276252d 292 SUPERFAMILY SSF48452 164 264 3.57E-10 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS02140 a7337a5713352270f9154eb02276252d 292 Gene3D G3DSA:3.90.70.10 14 144 5.1E-16 T 29-03-2018 AM474_RS02140 a7337a5713352270f9154eb02276252d 292 Gene3D G3DSA:1.25.40.10 145 275 1.3E-12 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS02140 a7337a5713352270f9154eb02276252d 292 Pfam PF13529 Peptidase_C39 like family 9 117 1.3E-7 T 29-03-2018 AM474_RS14445 9bae234b3f3f0ff2bac471194a2ec32e 304 Pfam PF13488 Glycine zipper 71 116 6.7E-7 T 29-03-2018 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 3.3E-62 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 SUPERFAMILY SSF54506 1 260 9.89E-86 T 29-03-2018 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 259 8.0E-42 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 Gene3D G3DSA:3.10.310.10 1 123 1.7E-30 T 29-03-2018 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 PIRSF PIRSF016184 1 260 1.5E-61 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS07235 1e366be7aecaad19b922237fb5127ad7 261 Gene3D G3DSA:3.10.310.10 124 248 7.4E-41 T 29-03-2018 AM474_RS22955 575dab71e2bd77c5274b7916a45365b8 312 Pfam PF00581 Rhodanese-like domain 115 210 5.5E-7 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS22955 575dab71e2bd77c5274b7916a45365b8 312 Gene3D G3DSA:3.40.250.10 107 218 1.8E-25 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS22955 575dab71e2bd77c5274b7916a45365b8 312 SUPERFAMILY SSF52821 90 225 3.98E-29 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS22955 575dab71e2bd77c5274b7916a45365b8 312 SMART SM00450 113 214 7.0E-16 T 29-03-2018 IPR001763 Rhodanese-like domain AM474_RS22955 575dab71e2bd77c5274b7916a45365b8 312 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 46.704 T 29-03-2018 IPR020936 Uncharacterised protein family UPF0176 AM474_RS17670 f01c2bd282731cc602621051a8fbf56b 207 Pfam PF04350 Pilus assembly protein, PilO 58 202 5.6E-57 T 29-03-2018 IPR007445 Pilus assembly protein, PilO AM474_RS17670 f01c2bd282731cc602621051a8fbf56b 207 Gene3D G3DSA:1.10.287.540 67 102 2.7E-19 T 29-03-2018 AM474_RS17670 f01c2bd282731cc602621051a8fbf56b 207 PIRSF PIRSF016482 1 206 1.6E-88 T 29-03-2018 IPR007445 Pilus assembly protein, PilO AM474_RS17670 f01c2bd282731cc602621051a8fbf56b 207 Gene3D G3DSA:3.30.70.60 103 207 1.8E-26 T 29-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM474_RS09800 d6541582194c0a2ceade3731a3fbed45 253 Pfam PF02698 DUF218 domain 81 243 1.4E-26 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM474_RS09800 d6541582194c0a2ceade3731a3fbed45 253 Gene3D G3DSA:3.40.50.620 75 215 1.4E-31 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS12835 e667c065fcbf385370f4db841f3527ba 335 PIRSF PIRSF003097 37 331 6.2E-64 T 29-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 AM474_RS01210 97ed81fb5f28279ef939476c3138fa8a 196 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 3.3E-5 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS01210 97ed81fb5f28279ef939476c3138fa8a 196 Gene3D G3DSA:2.10.70.20 138 183 3.1E-7 T 29-03-2018 AM474_RS23420 147e954a40a99554b42cab23c0b35beb 77 Gene3D G3DSA:3.40.30.10 4 68 1.2E-9 T 29-03-2018 AM474_RS23420 147e954a40a99554b42cab23c0b35beb 77 Pfam PF13192 Thioredoxin domain 5 66 1.9E-7 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS23420 147e954a40a99554b42cab23c0b35beb 77 SUPERFAMILY SSF52833 2 76 2.11E-9 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS24255 32a6065d0ceb19264a2ce618ef14f79b 120 Pfam PF16703 Domain of unknown function (DUF5064) 1 116 6.7E-52 T 29-03-2018 IPR032024 Protein of unknown function DUF5064 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 Gene3D G3DSA:1.10.287.950 330 447 2.1E-7 T 29-03-2018 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 Gene3D G3DSA:1.10.287.950 46 307 0.008 T 29-03-2018 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 Gene3D G3DSA:1.10.287.950 448 678 1.7E-52 T 29-03-2018 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 SMART SM00283 413 674 2.0E-96 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 642 1.0E-43 T 29-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 SUPERFAMILY SSF58104 374 675 2.09E-67 T 29-03-2018 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 148 9.4E-26 T 29-03-2018 IPR029095 NarX-like, N-terminal AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 538 4.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 4.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS12650 5797163efe7734cd5454190d8b7d54e7 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 540 569 4.2E-20 T 29-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 AM474_RS30535 4215d1b8f6a4e3bd5c4fb6fcd842fd1b 528 Pfam PF06980 Protein of unknown function (DUF1302) 5 527 1.7E-141 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 Gene3D G3DSA:3.40.190.10 93 179 8.8E-15 T 29-03-2018 AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 Gene3D G3DSA:3.40.190.10 180 267 1.4E-29 T 29-03-2018 AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 SUPERFAMILY SSF53850 91 297 3.08E-47 T 29-03-2018 AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-19 T 29-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 Pfam PF03466 LysR substrate binding domain 90 295 1.1E-47 T 29-03-2018 IPR005119 LysR, substrate-binding AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 SUPERFAMILY SSF46785 7 114 2.09E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS00025 1346890187b8f6299fecbde9e1a2f0cb 304 Gene3D G3DSA:1.10.10.10 6 92 2.9E-21 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS22845 02130290e5d65f81d5609a9c9d59ed83 112 Pfam PF12088 Protein of unknown function (DUF3565) 48 104 6.6E-29 T 29-03-2018 IPR021948 Protein of unknown function DUF3565 AM474_RS22435 a647e30ef622b8c1510cd6e31cbd57d3 314 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 171 235 9.2E-26 T 29-03-2018 IPR017703 YgfZ/GcvT conserved site AM474_RS22435 a647e30ef622b8c1510cd6e31cbd57d3 314 SUPERFAMILY SSF101790 228 307 1.11E-14 T 29-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain AM474_RS22435 a647e30ef622b8c1510cd6e31cbd57d3 314 SUPERFAMILY SSF103025 4 225 9.1E-54 T 29-03-2018 AM474_RS22435 a647e30ef622b8c1510cd6e31cbd57d3 314 Gene3D G3DSA:3.30.70.1400 14 223 7.3E-24 T 29-03-2018 AM474_RS04385 641f4860ee3b9f58a8b23ebc00e9da9d 92 Pfam PF05768 Glutaredoxin-like domain (DUF836) 18 90 1.3E-16 T 29-03-2018 IPR008554 Glutaredoxin-like AM474_RS04385 641f4860ee3b9f58a8b23ebc00e9da9d 92 SUPERFAMILY SSF52833 7 91 3.58E-14 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS04385 641f4860ee3b9f58a8b23ebc00e9da9d 92 Gene3D G3DSA:3.40.30.10 16 92 1.2E-8 T 29-03-2018 AM474_RS17405 15d2a33cf8017e31522b7274e0a48927 510 SUPERFAMILY SSF48557 7 494 1.73E-162 T 29-03-2018 IPR008948 L-Aspartase-like GO:0003824 AM474_RS17405 15d2a33cf8017e31522b7274e0a48927 510 Pfam PF00221 Aromatic amino acid lyase 14 470 1.4E-160 T 29-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 AM474_RS17405 15d2a33cf8017e31522b7274e0a48927 510 Gene3D G3DSA:1.10.275.10 6 198 5.0E-54 T 29-03-2018 IPR024083 Fumarase/histidase, N-terminal AM474_RS17405 15d2a33cf8017e31522b7274e0a48927 510 Gene3D G3DSA:1.20.200.10 199 507 7.7E-116 T 29-03-2018 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 SUPERFAMILY SSF46626 55 135 1.14E-16 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 133 2.0E-13 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 Gene3D G3DSA:1.10.760.10 54 136 1.1E-9 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 PRINTS PR00607 Class IE cytochrome C signature 108 120 1.5E-19 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 PRINTS PR00607 Class IE cytochrome C signature 67 78 1.5E-19 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 PRINTS PR00607 Class IE cytochrome C signature 123 134 1.5E-19 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS16310 ddf28a033736e5547718d0645b4f0a68 136 PRINTS PR00607 Class IE cytochrome C signature 78 88 1.5E-19 T 29-03-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 AM474_RS01455 9f5b12ed116c5fdff91245a9070d875c 228 Gene3D G3DSA:3.40.50.880 1 228 8.6E-52 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS01455 9f5b12ed116c5fdff91245a9070d875c 228 SUPERFAMILY SSF52317 1 227 6.6E-68 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS01455 9f5b12ed116c5fdff91245a9070d875c 228 Pfam PF01965 DJ-1/PfpI family 28 224 3.0E-13 T 29-03-2018 IPR002818 DJ-1/PfpI AM474_RS02890 f0c09eb7b894e9c09336441a75f03c24 116 Pfam PF02411 MerT mercuric transport protein 1 116 1.0E-59 T 29-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 AM474_RS02890 f0c09eb7b894e9c09336441a75f03c24 116 Gene3D G3DSA:1.10.287.910 16 68 7.5E-19 T 29-03-2018 AM474_RS26430 4685bde8b60744c54ea80a64c89dd426 262 Pfam PF13614 AAA domain 1 179 1.2E-41 T 29-03-2018 IPR025669 AAA domain AM474_RS26430 4685bde8b60744c54ea80a64c89dd426 262 Gene3D G3DSA:3.40.50.300 1 261 3.8E-50 T 29-03-2018 AM474_RS26430 4685bde8b60744c54ea80a64c89dd426 262 SUPERFAMILY SSF52540 1 255 7.15E-51 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS04115 d0585b42beea8db0c7c5b16edf4b406b 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 138 1.6E-26 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 29-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.8E-66 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 Gene3D G3DSA:3.20.20.70 1 251 1.9E-94 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 SUPERFAMILY SSF51351 1 248 2.36E-86 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.187 T 29-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS19495 07cf39b60741969229bcbc36ef439cd2 251 Pfam PF00121 Triosephosphate isomerase 5 246 1.6E-82 T 29-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM474_RS25415 309e63144e7ea943ca11768269d67dde 679 Pfam PF04632 Fusaric acid resistance protein family 23 660 6.3E-187 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS25415 309e63144e7ea943ca11768269d67dde 679 Gene3D G3DSA:1.25.40.10 172 632 1.0E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS08570 433e9e1a8b0f06c34173384be3fa555f 260 Pfam PF01925 Sulfite exporter TauE/SafE 25 252 1.4E-29 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS02610 937d5361786290e99e0924d5799723ca 99 Gene3D G3DSA:2.40.10.220 4 99 6.2E-16 T 29-03-2018 AM474_RS02610 937d5361786290e99e0924d5799723ca 99 SUPERFAMILY SSF141371 6 94 2.35E-16 T 29-03-2018 AM474_RS02610 937d5361786290e99e0924d5799723ca 99 Pfam PF07238 PilZ domain 10 95 3.2E-13 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS22765 d79a532b9f0b266db54e06584511a1f5 362 Pfam PF11876 Protein of unknown function (DUF3396) 125 331 4.4E-64 T 29-03-2018 IPR021815 Protein of unknown function DUF3396 AM474_RS07245 484b3a72f9800b64304e3cdb00042f90 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 142 4.9E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS07245 484b3a72f9800b64304e3cdb00042f90 156 SUPERFAMILY SSF55826 2 153 1.16E-40 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS07245 484b3a72f9800b64304e3cdb00042f90 156 Gene3D G3DSA:3.90.960.10 1 156 2.2E-37 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS07245 484b3a72f9800b64304e3cdb00042f90 156 PIRSF PIRSF006181 1 156 4.3E-54 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM474_RS07245 484b3a72f9800b64304e3cdb00042f90 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 8.8E-55 T 29-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AM474_RS29955 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 79 8.5E-6 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM474_RS29955 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 158 245 3.2E-7 T 29-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 AM474_RS29955 974d7a29887cfda5d4c02328e2ac9288 408 Pfam PF11922 Domain of unknown function (DUF3440) 247 348 8.8E-26 T 29-03-2018 IPR021845 Protein of unknown function DUF3440 AM474_RS29955 974d7a29887cfda5d4c02328e2ac9288 408 Gene3D G3DSA:3.40.50.620 9 243 4.9E-25 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS29955 974d7a29887cfda5d4c02328e2ac9288 408 SUPERFAMILY SSF52402 5 243 3.77E-39 T 29-03-2018 AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 476 627 7.1E-32 T 29-03-2018 IPR008023 Protein of unknown function DUF748 AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 140 291 2.4E-33 T 29-03-2018 IPR008023 Protein of unknown function DUF748 AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 Pfam PF05359 Domain of Unknown Function (DUF748) 692 837 7.0E-41 T 29-03-2018 IPR008023 Protein of unknown function DUF748 AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 SUPERFAMILY SSF103088 904 945 1.7E-5 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 Gene3D G3DSA:3.30.1330.60 384 1075 9.2E-18 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS19575 8d53be12cb05fae5839e15cdd4a2a068 1088 Pfam PF00691 OmpA family 907 946 1.9E-4 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS22810 a19533a5a9d9274d1a19d27451405161 277 Gene3D G3DSA:1.20.1260.10 35 203 5.6E-6 T 29-03-2018 IPR012347 Ferritin-related AM474_RS22810 a19533a5a9d9274d1a19d27451405161 277 Pfam PF10118 Predicted metal-dependent hydrolase 13 257 9.8E-89 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS22810 a19533a5a9d9274d1a19d27451405161 277 PIRSF PIRSF007580 1 277 1.8E-100 T 29-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 AM474_RS28450 df2b1c59e2710edb1f28e2c7de102d45 291 SUPERFAMILY SSF53474 3 265 1.53E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28450 df2b1c59e2710edb1f28e2c7de102d45 291 Pfam PF12146 Serine aminopeptidase, S33 27 118 4.6E-12 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS28450 df2b1c59e2710edb1f28e2c7de102d45 291 Gene3D G3DSA:3.40.50.1820 2 273 9.2E-21 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28450 df2b1c59e2710edb1f28e2c7de102d45 291 PIRSF PIRSF037442 2 287 1.6E-95 T 29-03-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 Gene3D G3DSA:2.30.30.180 88 148 1.5E-14 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.6E-20 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF74942 84 151 1.02E-17 T 29-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 Pfam PF02576 RimP N-terminal domain 11 83 1.8E-31 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 Gene3D G3DSA:3.30.300.70 1 80 4.1E-31 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 SUPERFAMILY SSF75420 3 83 4.18E-27 T 29-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AM474_RS19515 5ee64c2c3e08d22c2eb9b9754d891288 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 25.859 T 29-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 Gene3D G3DSA:3.40.50.300 251 496 5.4E-83 T 29-03-2018 AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 Gene3D G3DSA:3.40.50.300 2 250 1.1E-72 T 29-03-2018 AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 SUPERFAMILY SSF52540 302 489 1.21E-24 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 SUPERFAMILY SSF52540 41 216 2.02E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 234 1.5E-53 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 495 3.1E-99 T 29-03-2018 IPR022488 Polyphosphate kinase-2-related AM474_RS06675 eb6c241d5544a13451176181e2b71428 496 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 491 8.8E-236 T 29-03-2018 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 AM474_RS22310 b4a51e2674ad3916a340e8fb5a934d2a 358 Pfam PF09925 Predicted membrane protein (DUF2157) 64 181 1.6E-15 T 29-03-2018 IPR018677 Domain of unknown function DUF2157 AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 Pfam PF05048 Periplasmic copper-binding protein (NosD) 144 383 1.1E-68 T 29-03-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00722 38 187 3.9E-23 T 29-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00722 193 367 1.6E-29 T 29-03-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 41 420 4.9E-140 T 29-03-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 Gene3D G3DSA:2.160.20.10 37 268 5.2E-28 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 Gene3D G3DSA:2.160.20.10 269 379 3.2E-9 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 233 255 340.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 211 232 3900.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 137 166 1000.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 115 136 170.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 189 210 1500.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 292 313 400.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 85 113 31.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 315 353 4000.0 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SMART SM00710 167 188 1.5 T 29-03-2018 IPR006626 Parallel beta-helix repeat AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 SUPERFAMILY SSF51126 37 407 3.03E-56 T 29-03-2018 IPR011050 Pectin lyase fold/virulence factor AM474_RS06340 faadd1f1b62fdd7565f1cd7db9e03e6f 428 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 288 329 1.6E-5 T 29-03-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS16750 af7c0ee738cf3554e2f74afff9e2c73a 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 253 8.2E-16 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS16750 af7c0ee738cf3554e2f74afff9e2c73a 539 SUPERFAMILY SSF161098 281 531 3.79E-34 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS16750 af7c0ee738cf3554e2f74afff9e2c73a 539 Gene3D G3DSA:1.10.3720.10 313 539 8.5E-23 T 29-03-2018 AM474_RS16750 af7c0ee738cf3554e2f74afff9e2c73a 539 SUPERFAMILY SSF161098 8 252 5.45E-46 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS16750 af7c0ee738cf3554e2f74afff9e2c73a 539 Gene3D G3DSA:1.10.3720.10 40 261 2.0E-32 T 29-03-2018 AM474_RS02190 d7034cf0eced3091517c01cc694c447e 155 Pfam PF13185 GAF domain 60 142 2.9E-7 T 29-03-2018 IPR003018 GAF domain GO:0005515 AM474_RS02190 d7034cf0eced3091517c01cc694c447e 155 SUPERFAMILY SSF55781 12 146 4.77E-13 T 29-03-2018 IPR029016 GAF domain-like AM474_RS02190 d7034cf0eced3091517c01cc694c447e 155 Gene3D G3DSA:3.30.450.40 1 153 7.9E-16 T 29-03-2018 IPR029016 GAF domain-like AM474_RS09450 3b0e0ddf3ae80169fb1c2bfd27ed1100 306 SUPERFAMILY SSF56645 13 197 1.31E-14 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS09450 3b0e0ddf3ae80169fb1c2bfd27ed1100 306 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 93 1.3E-4 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS09450 3b0e0ddf3ae80169fb1c2bfd27ed1100 306 Gene3D G3DSA:1.10.540.10 2 98 1.5E-8 T 29-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AM474_RS19045 b0e59308da399a0338e83f227ad0c21c 284 SUPERFAMILY SSF103481 182 282 1.83E-15 T 29-03-2018 AM474_RS19045 b0e59308da399a0338e83f227ad0c21c 284 Pfam PF00892 EamA-like transporter family 151 279 3.0E-13 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19045 b0e59308da399a0338e83f227ad0c21c 284 Pfam PF00892 EamA-like transporter family 8 138 9.2E-17 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS19045 b0e59308da399a0338e83f227ad0c21c 284 SUPERFAMILY SSF103481 42 139 5.1E-13 T 29-03-2018 AM474_RS29985 e8e229f9455f4659df64cc4ecb0fa177 285 SUPERFAMILY SSF141868 29 264 3.01E-39 T 29-03-2018 IPR001633 EAL domain AM474_RS29985 e8e229f9455f4659df64cc4ecb0fa177 285 Gene3D G3DSA:3.20.20.450 12 273 9.4E-44 T 29-03-2018 IPR001633 EAL domain AM474_RS29985 e8e229f9455f4659df64cc4ecb0fa177 285 Pfam PF00563 EAL domain 28 259 6.7E-41 T 29-03-2018 IPR001633 EAL domain AM474_RS29985 e8e229f9455f4659df64cc4ecb0fa177 285 SMART SM00052 22 264 5.9E-13 T 29-03-2018 IPR001633 EAL domain AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 SUPERFAMILY SSF51230 3 126 1.44E-40 T 29-03-2018 IPR011053 Single hybrid motif AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 Gene3D G3DSA:2.40.50.100 6 129 2.7E-43 T 29-03-2018 AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 Pfam PF01597 Glycine cleavage H-protein 8 125 1.2E-42 T 29-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 29-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 5.0E-46 T 29-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM474_RS16760 4c0539e3dd946356988e70ad65d94090 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 39.116 T 29-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AM474_RS12475 247239d471cfc1fd34a6ef8d48537d51 496 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 38 455 7.2E-92 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM474_RS05465 72b1692138093c6e467f4e807a46aeaf 73 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 7.7E-22 T 29-03-2018 IPR018638 Domain of unknown function DUF2061, membrane AM474_RS16395 9145323569c5ccb8b857b6312604d9c9 304 Gene3D G3DSA:2.60.40.1090 155 304 1.3E-23 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS16395 9145323569c5ccb8b857b6312604d9c9 304 Pfam PF00419 Fimbrial protein 159 304 1.3E-13 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS16395 9145323569c5ccb8b857b6312604d9c9 304 SUPERFAMILY SSF49401 168 304 2.54E-20 T 29-03-2018 IPR008966 Adhesion domain AM474_RS31575 ed86a0103fdc7e6e97ae0c339a91e6a1 275 Gene3D G3DSA:3.40.50.170 33 275 3.4E-19 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS31575 ed86a0103fdc7e6e97ae0c339a91e6a1 275 SUPERFAMILY SSF53328 123 274 1.31E-16 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS31575 ed86a0103fdc7e6e97ae0c339a91e6a1 275 SUPERFAMILY SSF53328 47 93 1.31E-16 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS31575 ed86a0103fdc7e6e97ae0c339a91e6a1 275 Pfam PF00551 Formyl transferase 121 251 5.6E-5 T 29-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM474_RS24460 28a23e4d39e47e50e9ada580e626ace2 207 Gene3D G3DSA:3.90.70.10 35 201 4.1E-6 T 29-03-2018 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 Pfam PF00593 TonB dependent receptor 366 879 2.1E-54 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 SUPERFAMILY SSF56935 43 241 2.9E-107 T 29-03-2018 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 SUPERFAMILY SSF56935 299 347 2.9E-107 T 29-03-2018 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 SUPERFAMILY SSF56935 381 880 2.9E-107 T 29-03-2018 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 Gene3D G3DSA:2.40.170.20 172 880 3.3E-81 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 Gene3D G3DSA:2.170.130.10 35 171 6.7E-31 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS29675 6833b29408068bddae9f3e61c1d0ec99 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 170 1.9E-24 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 4 256 1.8E-88 T 29-03-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.8E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.8E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.8E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 1.8E-27 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS27675 7caa4df95eea9c6adcddbba3f8e46bd5 262 Pfam PF01311 Bacterial export proteins, family 1 11 243 4.4E-51 T 29-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 Gene3D G3DSA:3.10.20.30 1 106 6.1E-30 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 SUPERFAMILY SSF54292 3 102 8.73E-32 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 PRINTS PR00355 Adrenodoxin signature 59 73 9.5E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 PRINTS PR00355 Adrenodoxin signature 82 90 9.5E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 PRINTS PR00355 Adrenodoxin signature 40 50 9.5E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 90 1.6E-12 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS00415 3d99ca047f2b211e713dc1432810c35a 106 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS03575 113870abf4bd96b867283b70952639d9 213 SUPERFAMILY SSF48452 39 209 6.07E-59 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS03575 113870abf4bd96b867283b70952639d9 213 Pfam PF06041 Bacterial protein of unknown function (DUF924) 45 210 6.0E-49 T 29-03-2018 IPR010323 Protein of unknown function DUF924 AM474_RS03575 113870abf4bd96b867283b70952639d9 213 Gene3D G3DSA:1.20.58.320 35 113 5.8E-17 T 29-03-2018 AM474_RS03575 113870abf4bd96b867283b70952639d9 213 Gene3D G3DSA:1.25.40.10 114 212 1.1E-31 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS30435 cbdcddc459cec060764e5427757e3009 351 Gene3D G3DSA:3.90.1200.10 138 329 3.8E-25 T 29-03-2018 AM474_RS30435 cbdcddc459cec060764e5427757e3009 351 SUPERFAMILY SSF56112 37 322 1.08E-40 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS30435 cbdcddc459cec060764e5427757e3009 351 Pfam PF01636 Phosphotransferase enzyme family 41 288 4.7E-37 T 29-03-2018 IPR002575 Aminoglycoside phosphotransferase AM474_RS30435 cbdcddc459cec060764e5427757e3009 351 Gene3D G3DSA:3.30.200.20 18 125 2.8E-15 T 29-03-2018 AM474_RS23255 62b0902cc15f7e3ecc9893115189ef44 171 Gene3D G3DSA:3.30.1450.10 100 162 5.8E-5 T 29-03-2018 AM474_RS23255 62b0902cc15f7e3ecc9893115189ef44 171 Pfam PF13511 Domain of unknown function (DUF4124) 8 56 6.7E-10 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS29185 34812ef0dc97ca635d7498785c29cc54 399 SUPERFAMILY SSF56935 34 398 2.75E-28 T 29-03-2018 AM474_RS29185 34812ef0dc97ca635d7498785c29cc54 399 Pfam PF13609 Gram-negative porin 27 378 2.2E-24 T 29-03-2018 AM474_RS29185 34812ef0dc97ca635d7498785c29cc54 399 Gene3D G3DSA:2.40.160.10 19 398 9.0E-24 T 29-03-2018 AM474_RS25990 22cd6b3a61861c5a1a3e57ed1b303a79 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 10 569 3.3E-240 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM474_RS25990 22cd6b3a61861c5a1a3e57ed1b303a79 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 10 566 0.0 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM474_RS25990 22cd6b3a61861c5a1a3e57ed1b303a79 577 PIRSF PIRSF000719 1 577 1.7E-299 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM474_RS25990 22cd6b3a61861c5a1a3e57ed1b303a79 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 2 573 44.505 T 29-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 AM474_RS16460 a36ed211a7aadc9228dbc619a685af66 950 Pfam PF01295 Adenylate cyclase, class-I 244 844 3.5E-120 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM474_RS16460 a36ed211a7aadc9228dbc619a685af66 950 Pfam PF12633 Adenylate cyclase NT domain 21 217 1.7E-71 T 29-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 AM474_RS16460 a36ed211a7aadc9228dbc619a685af66 950 PIRSF PIRSF001444 16 931 0.0 T 29-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 AM474_RS31160 74de4735f9cd4b9e52febcb95c9734e8 295 Gene3D G3DSA:3.60.130.10 11 295 7.9E-71 T 29-03-2018 AM474_RS31160 74de4735f9cd4b9e52febcb95c9734e8 295 SUPERFAMILY SSF51197 15 295 7.78E-88 T 29-03-2018 AM474_RS31160 74de4735f9cd4b9e52febcb95c9734e8 295 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 17 288 5.7E-66 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS27565 c79216d9dfeaf1d5f1911c49198bb561 242 Pfam PF13672 Protein phosphatase 2C 18 202 2.3E-15 T 29-03-2018 AM474_RS27565 c79216d9dfeaf1d5f1911c49198bb561 242 SMART SM00332 4 240 4.8E-29 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS27565 c79216d9dfeaf1d5f1911c49198bb561 242 SMART SM00331 13 242 2.4E-27 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS27565 c79216d9dfeaf1d5f1911c49198bb561 242 Gene3D G3DSA:3.60.40.10 1 241 5.2E-42 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS27565 c79216d9dfeaf1d5f1911c49198bb561 242 SUPERFAMILY SSF81606 7 241 2.09E-60 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS04145 8bf8e01a5e3f6778e8fc77ce3bdf8859 416 Pfam PF02687 FtsX-like permease family 301 409 4.4E-14 T 29-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM474_RS04145 8bf8e01a5e3f6778e8fc77ce3bdf8859 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 1.1E-161 T 29-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM474_RS04145 8bf8e01a5e3f6778e8fc77ce3bdf8859 416 Pfam PF12704 MacB-like periplasmic core domain 27 232 1.1E-16 T 29-03-2018 IPR025857 MacB-like periplasmic core domain AM474_RS05240 b0c832b3140b7145fd1872ab21032725 250 Pfam PF02616 Segregation and condensation protein ScpA 160 228 5.5E-8 T 29-03-2018 IPR003768 Segregation and condensation protein A AM474_RS05240 b0c832b3140b7145fd1872ab21032725 250 Pfam PF02616 Segregation and condensation protein ScpA 18 109 1.3E-21 T 29-03-2018 IPR003768 Segregation and condensation protein A AM474_RS05240 b0c832b3140b7145fd1872ab21032725 250 Hamap MF_01805 Segregation and condensation protein A [scpA]. 1 231 22.335 T 29-03-2018 IPR003768 Segregation and condensation protein A AM474_RS05240 b0c832b3140b7145fd1872ab21032725 250 Gene3D G3DSA:1.10.10.580 162 229 2.3E-14 T 29-03-2018 AM474_RS22655 a8e09e4a731f1f2a684dbb36fe7ca26b 177 Pfam PF12365 Protein of unknown function (DUF3649) 143 169 4.9E-7 T 29-03-2018 IPR022109 Protein of unknown function DUF3649 AM474_RS11835 28493b14a8e7da4a3320989c7df934f5 115 Gene3D G3DSA:3.40.1580.10 2 109 2.2E-13 T 29-03-2018 AM474_RS11835 28493b14a8e7da4a3320989c7df934f5 115 SUPERFAMILY SSF160631 4 108 1.96E-10 T 29-03-2018 AM474_RS30020 965bf62aed6ede46ed6086581d665835 71 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 53 1.5E-6 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal AM474_RS27810 8d4e3f7b5ba9b4dbaca47e9c350b3d91 67 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 2 67 2.6E-23 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AM474_RS27810 8d4e3f7b5ba9b4dbaca47e9c350b3d91 67 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 2 67 3.0E-20 T 29-03-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 AM474_RS18325 cda5d64202ba65c7fb956ff3318506a1 152 Pfam PF06853 Protein of unknown function (DUF1249) 27 145 1.2E-43 T 29-03-2018 IPR009659 Protein of unknown function DUF1249 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 PRINTS PR01217 Proline rich extensin signature 140 156 6.1E-9 T 29-03-2018 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 PRINTS PR01217 Proline rich extensin signature 236 261 6.1E-9 T 29-03-2018 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 PRINTS PR01217 Proline rich extensin signature 177 198 6.1E-9 T 29-03-2018 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 PRINTS PR01217 Proline rich extensin signature 215 232 6.1E-9 T 29-03-2018 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 Gene3D G3DSA:1.20.1170.10 11 297 2.9E-5 T 29-03-2018 AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 8 134 3.6E-45 T 29-03-2018 IPR008769 Poly granule associated AM474_RS17570 5cb67a1badd239b9ac2c5497ff45d715 309 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 17 134 5.4E-43 T 29-03-2018 IPR008769 Poly granule associated AM474_RS14455 b896da09e0ed331c49a8d53b17fc00d8 91 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 54 2.4E-25 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM474_RS14455 b896da09e0ed331c49a8d53b17fc00d8 91 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 80 1.2E-36 T 29-03-2018 IPR012658 Conserved hypothetical protein CHP02443 AM474_RS14455 b896da09e0ed331c49a8d53b17fc00d8 91 Gene3D G3DSA:2.20.25.10 6 53 0.001 T 29-03-2018 AM474_RS16010 bb4acbc957c14dc42a988bd8bdf22140 151 PIRSF PIRSF029720 19 148 2.0E-56 T 29-03-2018 IPR014558 Uncharacterised conserved lipoprotein AM474_RS16010 bb4acbc957c14dc42a988bd8bdf22140 151 Pfam PF03640 Secreted repeat of unknown function 105 146 3.8E-19 T 29-03-2018 IPR005297 Lipoprotein repeat AM474_RS16010 bb4acbc957c14dc42a988bd8bdf22140 151 Pfam PF03640 Secreted repeat of unknown function 53 91 7.6E-14 T 29-03-2018 IPR005297 Lipoprotein repeat AM474_RS08645 8e7507a91f14fa576d7390cc1030b55d 482 Pfam PF03929 PepSY-associated TM region 16 421 4.1E-72 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS08645 8e7507a91f14fa576d7390cc1030b55d 482 Gene3D G3DSA:1.20.950.20 150 259 5.0E-4 T 29-03-2018 AM474_RS08645 8e7507a91f14fa576d7390cc1030b55d 482 Gene3D G3DSA:1.20.950.20 3 87 0.25 T 29-03-2018 AM474_RS08645 8e7507a91f14fa576d7390cc1030b55d 482 Pfam PF03413 Peptidase propeptide and YPEB domain 310 366 7.3E-4 T 29-03-2018 IPR025711 PepSY domain AM474_RS26200 3baf52806eec5b305fc8255f81bf7910 143 Pfam PF13673 Acetyltransferase (GNAT) domain 50 130 1.4E-16 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS26200 3baf52806eec5b305fc8255f81bf7910 143 SUPERFAMILY SSF55729 1 142 1.46E-27 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS26200 3baf52806eec5b305fc8255f81bf7910 143 Gene3D G3DSA:3.40.630.30 1 143 3.6E-26 T 29-03-2018 AM474_RS23460 a2ab1d4f2e5a5a7a605549d8244a3113 139 Pfam PF09842 Predicted membrane protein (DUF2069) 24 128 4.1E-31 T 29-03-2018 IPR018643 Protein of unknown function DUF2069, membrane AM474_RS32350 236233394ffe45eae6949cf81e847df9 331 Gene3D G3DSA:3.20.20.100 1 329 1.7E-111 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS32350 236233394ffe45eae6949cf81e847df9 331 Pfam PF00248 Aldo/keto reductase family 16 310 3.9E-81 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS32350 236233394ffe45eae6949cf81e847df9 331 SUPERFAMILY SSF51430 1 312 6.15E-104 T 29-03-2018 IPR023210 NADP-dependent oxidoreductase domain AM474_RS04160 b94396d1432290675fd5e7d0bfd563b4 240 SUPERFAMILY SSF51695 2 237 1.15E-61 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS04160 b94396d1432290675fd5e7d0bfd563b4 240 Gene3D G3DSA:3.20.20.190 1 240 6.3E-58 T 29-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 AM474_RS04160 b94396d1432290675fd5e7d0bfd563b4 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 7.1E-34 T 29-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AM474_RS02760 da14ef3eb119495394a04d637302f52d 166 Pfam PF03713 Domain of unknown function (DUF305) 110 161 4.0E-11 T 29-03-2018 IPR005183 Domain of unknown function DUF305 AM474_RS02760 da14ef3eb119495394a04d637302f52d 166 Gene3D G3DSA:1.20.1260.10 1 165 1.4E-21 T 29-03-2018 IPR012347 Ferritin-related AM474_RS21440 26826630deb09b7d728b19508dfa75be 333 Pfam PF04338 Protein of unknown function, DUF481 131 333 1.1E-31 T 29-03-2018 IPR007433 Protein of unknown function DUF481 AM474_RS16420 47a1853ded0fde3717333bebeb6f30e3 233 Pfam PF04340 Protein of unknown function, DUF484 8 227 1.5E-87 T 29-03-2018 IPR007435 Protein of unknown function DUF484 AM474_RS16420 47a1853ded0fde3717333bebeb6f30e3 233 Gene3D G3DSA:3.30.450.40 46 224 2.6E-18 T 29-03-2018 IPR029016 GAF domain-like AM474_RS10280 9f52c937b3f1b7ec0623050dbbe1ebef 381 Pfam PF00419 Fimbrial protein 241 380 2.9E-6 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS10280 9f52c937b3f1b7ec0623050dbbe1ebef 381 Gene3D G3DSA:2.60.40.1090 240 381 6.9E-20 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS10280 9f52c937b3f1b7ec0623050dbbe1ebef 381 SUPERFAMILY SSF49401 242 380 2.39E-17 T 29-03-2018 IPR008966 Adhesion domain AM474_RS28350 1e7654f2fba477385067e6905122e522 253 Gene3D G3DSA:3.40.50.150 34 222 3.2E-13 T 29-03-2018 AM474_RS28350 1e7654f2fba477385067e6905122e522 253 SUPERFAMILY SSF53335 90 178 1.44E-14 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS28350 1e7654f2fba477385067e6905122e522 253 Pfam PF08241 Methyltransferase domain 82 131 1.8E-6 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS10450 37e9c0b8da58347af8192764b30b1c27 195 Pfam PF01126 Heme oxygenase 9 192 4.0E-34 T 29-03-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS10450 37e9c0b8da58347af8192764b30b1c27 195 Gene3D G3DSA:1.20.910.10 2 193 5.6E-22 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS10450 37e9c0b8da58347af8192764b30b1c27 195 SUPERFAMILY SSF48613 7 191 9.39E-42 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS25150 a5c6f207195ae0b077c88e4bc1c269b6 65 Pfam PF07869 Protein of unknown function (DUF1656) 7 59 2.7E-11 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM474_RS28910 11f490315dedbddfdb3c8e9e3ec56b83 48 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 11 44 2.9E-9 T 29-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 AM474_RS28675 ff1a3f848606187c87d0b60c5827b8e2 425 Gene3D G3DSA:1.20.1600.10 26 413 5.2E-54 T 29-03-2018 AM474_RS28675 ff1a3f848606187c87d0b60c5827b8e2 425 SUPERFAMILY SSF56954 15 413 1.83E-66 T 29-03-2018 AM474_RS28675 ff1a3f848606187c87d0b60c5827b8e2 425 Pfam PF02321 Outer membrane efflux protein 245 401 2.1E-17 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS28675 ff1a3f848606187c87d0b60c5827b8e2 425 Pfam PF02321 Outer membrane efflux protein 35 211 1.0E-22 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS05315 e6f0f1da7c225615063cafd1fa53db9a 312 SUPERFAMILY SSF58104 159 295 4.45E-5 T 29-03-2018 AM474_RS05315 e6f0f1da7c225615063cafd1fa53db9a 312 Pfam PF02470 MlaD protein 39 116 4.8E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS05315 e6f0f1da7c225615063cafd1fa53db9a 312 Gene3D G3DSA:1.20.1170.10 96 298 2.6E-8 T 29-03-2018 AM474_RS07105 2966f83e9fe773721a1c73a459f1c79b 295 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 65.695 T 29-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 AM474_RS07105 2966f83e9fe773721a1c73a459f1c79b 295 SUPERFAMILY SSF88713 85 266 2.78E-30 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS07105 2966f83e9fe773721a1c73a459f1c79b 295 SUPERFAMILY SSF88713 14 41 2.78E-30 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS07105 2966f83e9fe773721a1c73a459f1c79b 295 Pfam PF01522 Polysaccharide deacetylase 15 170 1.0E-13 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM474_RS07105 2966f83e9fe773721a1c73a459f1c79b 295 Gene3D G3DSA:3.20.20.370 6 274 3.5E-29 T 29-03-2018 AM474_RS23510 e592c886509a5638cc18f50471e54688 135 SUPERFAMILY SSF54637 2 133 9.61E-27 T 29-03-2018 IPR029069 HotDog domain AM474_RS23510 e592c886509a5638cc18f50471e54688 135 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 132 2.6E-14 T 29-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AM474_RS23510 e592c886509a5638cc18f50471e54688 135 Gene3D G3DSA:3.10.129.10 1 134 2.8E-29 T 29-03-2018 AM474_RS23510 e592c886509a5638cc18f50471e54688 135 Pfam PF03061 Thioesterase superfamily 46 120 7.3E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS03525 5a03e99b87eb0dbee8084c33261a1f9d 119 Pfam PF06127 Protein of unknown function (DUF962) 11 85 1.4E-7 T 29-03-2018 IPR009305 Protein of unknown function DUF962 AM474_RS01075 a3270687efb81d0b45651a0b900fee97 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.323 T 29-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM474_RS01075 a3270687efb81d0b45651a0b900fee97 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 96 4.4E-22 T 29-03-2018 AM474_RS12510 28704e1ce7c27a53532e17b8150561d1 416 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 8.9E-60 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM474_RS01140 42500bdd922b972d40696b9b59b7a585 102 Pfam PF03413 Peptidase propeptide and YPEB domain 41 98 1.4E-13 T 29-03-2018 IPR025711 PepSY domain AM474_RS01140 42500bdd922b972d40696b9b59b7a585 102 Gene3D G3DSA:3.10.450.40 9 101 6.1E-13 T 29-03-2018 AM474_RS21110 ea6704317e9c17d62d63c13d47b2e99c 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 15 262 8.8E-93 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM474_RS21110 ea6704317e9c17d62d63c13d47b2e99c 265 Pfam PF02405 Permease MlaE 49 260 3.7E-77 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AM474_RS08625 09f2f75e54a80e869b589b96ce7c04c6 158 Pfam PF04314 Copper chaperone PCu(A)C 30 138 3.8E-38 T 29-03-2018 IPR007410 Copper chaperone PCuAC AM474_RS08625 09f2f75e54a80e869b589b96ce7c04c6 158 SUPERFAMILY SSF110087 1 146 4.32E-51 T 29-03-2018 IPR007410 Copper chaperone PCuAC AM474_RS08600 dadd70bb4756120466cc825a34faf5d0 426 PIRSF PIRSF006066 1 426 5.9E-140 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS08600 dadd70bb4756120466cc825a34faf5d0 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 4.0E-116 T 29-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 AM474_RS08600 dadd70bb4756120466cc825a34faf5d0 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 416 9.7E-102 T 29-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 PIRSF PIRSF000903 1 276 5.8E-121 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 SUPERFAMILY SSF56300 1 257 8.55E-58 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 1.7E-96 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 Gene3D G3DSA:3.60.21.10 1 281 9.3E-50 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 49.983 T 29-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 AM474_RS11675 4a1ffbb2d222ae871208faf3d903cedb 283 Pfam PF00149 Calcineurin-like phosphoesterase 2 150 1.4E-13 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS12130 22bde135cfc76473fe5ba13c9dbf58f7 171 Gene3D G3DSA:3.30.70.920 62 162 1.9E-12 T 29-03-2018 AM474_RS12130 22bde135cfc76473fe5ba13c9dbf58f7 171 Gene3D G3DSA:1.10.10.10 9 61 5.9E-5 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS29440 84797f0db772d3651a40f5f814a16b1b 140 Gene3D G3DSA:3.10.180.10 3 135 1.1E-24 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS29440 84797f0db772d3651a40f5f814a16b1b 140 SUPERFAMILY SSF54593 5 130 3.62E-27 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS29440 84797f0db772d3651a40f5f814a16b1b 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 3.9E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS28575 c356d73bd433291b0be70af56611e0ba 307 PIRSF PIRSF016660 1 305 2.3E-123 T 29-03-2018 IPR008526 Inner membrane protein YedI AM474_RS28575 c356d73bd433291b0be70af56611e0ba 307 Gene3D G3DSA:1.20.5.510 272 296 3.7E-4 T 29-03-2018 AM474_RS28575 c356d73bd433291b0be70af56611e0ba 307 Pfam PF05661 Protein of unknown function (DUF808) 4 291 3.9E-118 T 29-03-2018 IPR008526 Inner membrane protein YedI AM474_RS00035 434aa68ee974d781cdc84aff7ad97883 347 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 16 321 8.7E-125 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM474_RS00035 434aa68ee974d781cdc84aff7ad97883 347 Pfam PF03741 Integral membrane protein TerC family 82 290 2.2E-60 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS21945 1ab98afdc5529718ac1e027ea7e8a876 168 Pfam PF07811 TadE-like protein 26 68 3.7E-6 T 29-03-2018 IPR012495 TadE-like AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 8.2E-20 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 8.2E-20 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 8.2E-20 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 108 8.9E-27 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 109 8.9E-32 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS24405 375055ea9080dde4b51e8f1662876d14 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 109 18.671 T 29-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 5.6E-54 T 29-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 Pfam PF13365 Trypsin-like peptidase domain 107 241 1.9E-30 T 29-03-2018 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 SUPERFAMILY SSF50494 51 272 6.4E-63 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 Gene3D G3DSA:2.30.42.10 275 383 1.2E-23 T 29-03-2018 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 SMART SM00228 280 362 1.3E-12 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 SUPERFAMILY SSF50156 238 363 1.71E-22 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 Gene3D G3DSA:2.40.10.10 52 157 1.9E-29 T 29-03-2018 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 Pfam PF13180 PDZ domain 280 370 2.4E-15 T 29-03-2018 IPR001478 PDZ domain GO:0005515 AM474_RS21155 63ccb1845528db280eef180a0726c05a 389 Gene3D G3DSA:2.40.10.10 158 269 6.0E-42 T 29-03-2018 AM474_RS16680 1bd6f30a676931e37d5a2141453ed56f 152 SUPERFAMILY SSF88697 3 151 1.82E-58 T 29-03-2018 IPR015947 PUA-like domain AM474_RS16680 1bd6f30a676931e37d5a2141453ed56f 152 Gene3D G3DSA:3.10.590.10 1 152 3.2E-58 T 29-03-2018 AM474_RS16680 1bd6f30a676931e37d5a2141453ed56f 152 Pfam PF01878 EVE domain 3 147 3.8E-53 T 29-03-2018 IPR002740 EVE domain AM474_RS22395 1f154bb22787ad51fc93806b771c0530 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 340 5.5E-38 T 29-03-2018 IPR017516 AbrB duplication AM474_RS22395 1f154bb22787ad51fc93806b771c0530 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 164 3.9E-37 T 29-03-2018 IPR017516 AbrB duplication AM474_RS22395 1f154bb22787ad51fc93806b771c0530 345 Pfam PF05145 Transition state regulatory protein AbrB 33 340 3.1E-83 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM474_RS22395 1f154bb22787ad51fc93806b771c0530 345 PIRSF PIRSF038991 3 345 2.3E-67 T 29-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 Gene3D G3DSA:1.20.245.10 369 685 1.1E-86 T 29-03-2018 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 SUPERFAMILY SSF48484 198 685 3.27E-137 T 29-03-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 ProSitePatterns PS00711 Lipoxygenases iron-binding region signature 1. 372 386 - T 29-03-2018 IPR020833 Lipoxygenase, iron binding site GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 ProSitePatterns PS00081 Lipoxygenases iron-binding region signature 2. 399 409 - T 29-03-2018 IPR020834 Lipoxygenase, conserved site GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 Pfam PF00305 Lipoxygenase 226 667 6.1E-60 T 29-03-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 Gene3D G3DSA:3.10.450.60 245 368 7.4E-23 T 29-03-2018 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 PRINTS PR00087 Lipoxygenase signature 392 412 4.5E-8 T 29-03-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 PRINTS PR00087 Lipoxygenase signature 354 371 4.5E-8 T 29-03-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 AM474_RS24785 fe8d4e4e6146c8149494cda0455437d3 685 PRINTS PR00087 Lipoxygenase signature 372 389 4.5E-8 T 29-03-2018 IPR013819 Lipoxygenase, C-terminal GO:0016702|GO:0046872|GO:0055114 AM474_RS10060 0888e8ab092494249ac3e8709117b85d 244 Pfam PF12698 ABC-2 family transporter protein 54 214 9.4E-10 T 29-03-2018 AM474_RS28805 de12a2ddb5b6ee1db02fd44e646ff8ab 405 Pfam PF01474 Class-II DAHP synthetase family 160 384 5.3E-78 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS28805 de12a2ddb5b6ee1db02fd44e646ff8ab 405 SUPERFAMILY SSF51569 4 390 7.32E-144 T 29-03-2018 AM474_RS05835 b56a8e34fc6c2222daeace22231b29ef 391 SUPERFAMILY SSF103473 5 372 6.28E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS05835 b56a8e34fc6c2222daeace22231b29ef 391 Pfam PF07690 Major Facilitator Superfamily 8 318 2.3E-42 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS05835 b56a8e34fc6c2222daeace22231b29ef 391 Gene3D G3DSA:1.20.1250.20 2 186 5.6E-30 T 29-03-2018 AM474_RS05835 b56a8e34fc6c2222daeace22231b29ef 391 Gene3D G3DSA:1.20.1250.20 189 375 9.2E-17 T 29-03-2018 AM474_RS19770 39439c62f5b2421017372f65915d1729 109 Gene3D G3DSA:1.20.1440.40 5 105 1.2E-32 T 29-03-2018 IPR023376 YqcC-like domain AM474_RS19770 39439c62f5b2421017372f65915d1729 109 PIRSF PIRSF006257 2 109 4.8E-40 T 29-03-2018 IPR007384 Protein of unknown function UCP006257 AM474_RS19770 39439c62f5b2421017372f65915d1729 109 SUPERFAMILY SSF158452 7 107 2.88E-34 T 29-03-2018 IPR023376 YqcC-like domain AM474_RS19770 39439c62f5b2421017372f65915d1729 109 Pfam PF04287 tRNA pseudouridine synthase C 8 104 3.2E-33 T 29-03-2018 IPR023376 YqcC-like domain AM474_RS05320 23930ceb8674e973e75a5c5aaf1651e3 214 SUPERFAMILY SSF159594 36 205 4.97E-44 T 29-03-2018 AM474_RS05320 23930ceb8674e973e75a5c5aaf1651e3 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 38 198 6.7E-26 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM474_RS05320 23930ceb8674e973e75a5c5aaf1651e3 214 Gene3D G3DSA:3.40.50.10610 22 214 2.9E-42 T 29-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AM474_RS17505 233ce495932b93372cbf65315a8087ef 153 Pfam PF03682 Uncharacterised protein family (UPF0158) 1 152 1.9E-56 T 29-03-2018 IPR005361 Uncharacterised protein family UPF0158 AM474_RS30195 166893e342d8fa0a59e84184e5057662 156 Gene3D G3DSA:1.20.120.520 1 146 5.3E-21 T 29-03-2018 AM474_RS30195 166893e342d8fa0a59e84184e5057662 156 Pfam PF01814 Hemerythrin HHE cation binding domain 3 124 7.3E-18 T 29-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AM474_RS20985 98f67bcc81c246582b8ae6201cb1d600 346 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 5 277 6.3E-64 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM474_RS20985 98f67bcc81c246582b8ae6201cb1d600 346 PIRSF PIRSF038471 2 284 2.2E-76 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM474_RS20985 98f67bcc81c246582b8ae6201cb1d600 346 Pfam PF04085 rod shape-determining protein MreC 124 269 5.6E-38 T 29-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM474_RS11515 3a2b227c1f343c683b437543613ae900 386 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 106 272 4.1E-33 T 29-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain AM474_RS11515 3a2b227c1f343c683b437543613ae900 386 Pfam PF17482 Phage tail sheath C-terminal domain 273 375 2.7E-20 T 29-03-2018 IPR020287 Tail sheath protein, C-terminal domain AM474_RS03220 2bebbe1c695a24371bf9c6f2347ebdd1 423 SUPERFAMILY SSF53098 26 324 2.43E-20 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS03220 2bebbe1c695a24371bf9c6f2347ebdd1 423 Pfam PF01609 Transposase DDE domain 109 326 1.1E-17 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM474_RS03220 2bebbe1c695a24371bf9c6f2347ebdd1 423 Gene3D G3DSA:3.90.350.10 168 317 9.1E-16 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AM474_RS05020 2bebbe1c695a24371bf9c6f2347ebdd1 423 SUPERFAMILY SSF53098 26 324 2.43E-20 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS05020 2bebbe1c695a24371bf9c6f2347ebdd1 423 Pfam PF01609 Transposase DDE domain 109 326 1.1E-17 T 29-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 AM474_RS05020 2bebbe1c695a24371bf9c6f2347ebdd1 423 Gene3D G3DSA:3.90.350.10 168 317 9.1E-16 T 29-03-2018 IPR014736 Transposase, Tn5-like, core AM474_RS20790 49c16bfeeb0f9f8e8860af37a24a7f2b 141 SUPERFAMILY SSF54593 4 134 2.2E-25 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS20790 49c16bfeeb0f9f8e8860af37a24a7f2b 141 Gene3D G3DSA:3.10.180.10 4 135 1.8E-23 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS20790 49c16bfeeb0f9f8e8860af37a24a7f2b 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.2E-6 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS15555 2c2db7e53acae488c6046671f0e26417 241 Pfam PF11340 Protein of unknown function (DUF3142) 99 184 2.9E-16 T 29-03-2018 IPR021488 Protein of unknown function DUF3142 AM474_RS15555 2c2db7e53acae488c6046671f0e26417 241 Gene3D G3DSA:3.20.20.80 82 228 3.2E-7 T 29-03-2018 AM474_RS15555 2c2db7e53acae488c6046671f0e26417 241 SUPERFAMILY SSF51445 102 200 3.76E-7 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS08025 4ae355f483567d72cc6cfd2a4580cf33 409 Gene3D G3DSA:3.40.50.10540 12 409 8.1E-139 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS08025 4ae355f483567d72cc6cfd2a4580cf33 409 SUPERFAMILY SSF89796 16 409 2.09E-135 T 29-03-2018 IPR023606 CoA-transferase family III domain AM474_RS08025 4ae355f483567d72cc6cfd2a4580cf33 409 Pfam PF02515 CoA-transferase family III 18 386 2.9E-121 T 29-03-2018 IPR003673 CoA-transferase family III GO:0003824 AM474_RS03615 25ed43c35551a14143575f47cb855135 600 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 348 3.0E-127 T 29-03-2018 IPR010839 Acyclic terpene utilisation AM474_RS27935 36d30b03a2fa9489ebc15fee6915c34a 240 Gene3D G3DSA:3.40.50.880 13 237 1.5E-29 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS27935 36d30b03a2fa9489ebc15fee6915c34a 240 SUPERFAMILY SSF52317 3 229 4.43E-40 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS27935 36d30b03a2fa9489ebc15fee6915c34a 240 Pfam PF00117 Glutamine amidotransferase class-I 92 191 3.5E-10 T 29-03-2018 IPR017926 Glutamine amidotransferase AM474_RS24130 77462f223b16f4ff0a085f40d6a4923d 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 2.0E-7 T 29-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AM474_RS24130 77462f223b16f4ff0a085f40d6a4923d 154 Gene3D G3DSA:3.40.190.10 1 151 7.1E-4 T 29-03-2018 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 65 5.7E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 73 96 5.7E-7 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 SUPERFAMILY SSF46689 41 108 2.6E-14 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 Gene3D G3DSA:1.10.10.60 19 86 4.0E-16 T 29-03-2018 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 Gene3D G3DSA:1.10.10.60 87 187 5.8E-10 T 29-03-2018 AM474_RS00325 df4469f34f96dd4ee5e08f9dbe5b8acf 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 52 96 4.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS04865 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Pfam PF00011 Hsp20/alpha crystallin family 44 140 3.3E-17 T 29-03-2018 IPR002068 Alpha crystallin/Hsp20 domain AM474_RS04865 bcf5bb6b7b5d8d3e70c8b696b6733364 149 Gene3D G3DSA:2.60.40.790 10 140 3.1E-22 T 29-03-2018 IPR008978 HSP20-like chaperone AM474_RS04865 bcf5bb6b7b5d8d3e70c8b696b6733364 149 SUPERFAMILY SSF49764 11 141 2.51E-21 T 29-03-2018 IPR008978 HSP20-like chaperone AM474_RS05625 81d4615a567f617086a2eea49513b5b7 104 SUPERFAMILY SSF103481 5 103 2.48E-19 T 29-03-2018 AM474_RS05625 81d4615a567f617086a2eea49513b5b7 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.4E-28 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS15030 e73b87c004f61124e7bcd9e671440e50 414 Pfam PF00144 Beta-lactamase 95 408 1.9E-56 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS15030 e73b87c004f61124e7bcd9e671440e50 414 Gene3D G3DSA:3.40.710.10 91 410 1.3E-56 T 29-03-2018 AM474_RS15030 e73b87c004f61124e7bcd9e671440e50 414 SUPERFAMILY SSF56601 43 413 1.79E-88 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS29490 954356aef494e6e05be8ea071fec3b86 224 SUPERFAMILY SSF53335 7 221 1.66E-30 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS29490 954356aef494e6e05be8ea071fec3b86 224 Pfam PF13649 Methyltransferase domain 45 140 6.4E-13 T 29-03-2018 AM474_RS29490 954356aef494e6e05be8ea071fec3b86 224 Gene3D G3DSA:3.40.50.150 3 224 1.6E-28 T 29-03-2018 AM474_RS30485 ed5d45d2155fd665146f227848876b68 474 Pfam PF00171 Aldehyde dehydrogenase family 14 470 2.9E-159 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS30485 ed5d45d2155fd665146f227848876b68 474 SUPERFAMILY SSF53720 2 473 6.02E-151 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS30485 ed5d45d2155fd665146f227848876b68 474 Gene3D G3DSA:3.40.309.10 261 456 2.3E-68 T 29-03-2018 AM474_RS30485 ed5d45d2155fd665146f227848876b68 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS30485 ed5d45d2155fd665146f227848876b68 474 Gene3D G3DSA:3.40.605.10 1 260 5.5E-88 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS28155 c2a22e73fcd365ed4e27df1278bc8626 403 TIGRFAM TIGR00886 2A0108: nitrite transporter 13 347 2.7E-100 T 29-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AM474_RS28155 c2a22e73fcd365ed4e27df1278bc8626 403 Gene3D G3DSA:1.20.1250.20 203 393 9.3E-25 T 29-03-2018 AM474_RS28155 c2a22e73fcd365ed4e27df1278bc8626 403 SUPERFAMILY SSF103473 6 390 9.16E-56 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS28155 c2a22e73fcd365ed4e27df1278bc8626 403 Pfam PF07690 Major Facilitator Superfamily 23 348 3.2E-38 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS28155 c2a22e73fcd365ed4e27df1278bc8626 403 Gene3D G3DSA:1.20.1250.20 2 202 1.2E-23 T 29-03-2018 AM474_RS21670 78e9bd7850bcb5a667c44a1f7a1100cb 384 SUPERFAMILY SSF56601 23 373 2.71E-78 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS21670 78e9bd7850bcb5a667c44a1f7a1100cb 384 Gene3D G3DSA:3.40.710.10 45 383 5.4E-53 T 29-03-2018 AM474_RS21670 78e9bd7850bcb5a667c44a1f7a1100cb 384 Pfam PF00144 Beta-lactamase 71 363 9.9E-46 T 29-03-2018 IPR001466 Beta-lactamase-related AM474_RS14235 2a0039a8b88bd61a8dc76f43e72d449d 264 Pfam PF02104 SURF1 family 40 237 1.4E-31 T 29-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS21625 049d37399c3c49e26633f4ad330f637a 350 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 6.5E-85 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS21625 049d37399c3c49e26633f4ad330f637a 350 Gene3D G3DSA:3.20.20.70 1 350 6.6E-126 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS21625 049d37399c3c49e26633f4ad330f637a 350 SUPERFAMILY SSF51395 1 349 3.91E-122 T 29-03-2018 AM474_RS30260 fec251e208c239f60c89e7ca1a1b54ae 404 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 404 77.83 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS30260 fec251e208c239f60c89e7ca1a1b54ae 404 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 12 290 3.6E-88 T 29-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS30260 fec251e208c239f60c89e7ca1a1b54ae 404 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 11 295 3.3E-114 T 29-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AM474_RS30260 fec251e208c239f60c89e7ca1a1b54ae 404 SUPERFAMILY SSF55931 8 368 5.89E-86 T 29-03-2018 AM474_RS12305 c26d911cb90e4ebeca2079d7ea109dbc 575 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 109 530 3.4E-78 T 29-03-2018 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AM474_RS17790 4c160940ad641adc69484ebf2b3b987c 190 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 119 3.0E-13 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM474_RS17790 4c160940ad641adc69484ebf2b3b987c 190 Pfam PF05069 Phage virion morphogenesis family 11 182 4.4E-32 T 29-03-2018 IPR006522 Phage virion morphogensis protein AM474_RS07345 9252e87c36c01bf7a25f99685ba93cca 271 Pfam PF00795 Carbon-nitrogen hydrolase 5 242 4.7E-49 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS07345 9252e87c36c01bf7a25f99685ba93cca 271 SUPERFAMILY SSF56317 1 251 5.62E-70 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS07345 9252e87c36c01bf7a25f99685ba93cca 271 Gene3D G3DSA:3.60.110.10 1 254 9.7E-69 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS06260 bdc39ee6899ba8a25a7c4f8222b5aca2 294 Pfam PF06007 Phosphonate metabolism protein PhnJ 14 285 5.9E-145 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS06260 bdc39ee6899ba8a25a7c4f8222b5aca2 294 PIRSF PIRSF011468 5 294 1.0E-158 T 29-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM474_RS30750 d5f326a1b9a552277d3be889290323e8 239 Gene3D G3DSA:2.40.33.20 8 237 4.4E-56 T 29-03-2018 AM474_RS30750 d5f326a1b9a552277d3be889290323e8 239 Pfam PF03473 MOSC domain 51 164 2.1E-25 T 29-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AM474_RS30750 d5f326a1b9a552277d3be889290323e8 239 SUPERFAMILY SSF50800 8 228 5.75E-76 T 29-03-2018 IPR011037 Pyruvate kinase-like, insert domain AM474_RS30750 d5f326a1b9a552277d3be889290323e8 239 Pfam PF03475 3-alpha domain 175 217 2.4E-13 T 29-03-2018 IPR005163 3-alpha domain AM474_RS20455 d17292f615b53c88f678b6f0b0892cd5 162 Pfam PF11220 Protein of unknown function (DUF3015) 19 158 4.7E-56 T 29-03-2018 IPR021383 Protein of unknown function DUF3015 AM474_RS07710 fc91c3429bf02086db31030824c12a6e 615 Pfam PF09822 ABC-type uncharacterized transport system 33 300 4.5E-69 T 29-03-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 AM474_RS07710 fc91c3429bf02086db31030824c12a6e 615 Gene3D G3DSA:3.40.50.880 174 390 1.0E-4 T 29-03-2018 IPR029062 Class I glutamine amidotransferase-like AM474_RS08965 16469a546cde57517afd20a916a0ebbf 334 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 3.6E-88 T 29-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 SUPERFAMILY SSF51735 4 247 9.53E-77 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 247 3.8E-63 T 29-03-2018 AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.5E-13 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 Gene3D G3DSA:3.40.50.720 40 248 2.6E-65 T 29-03-2018 AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 Gene3D G3DSA:3.40.50.720 1 39 2.5E-7 T 29-03-2018 AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS04875 b4a98a2ebe1f914c1c03e9c969728413 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.9E-43 T 29-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM474_RS13005 c89522991f9bf1b6edb7147599976672 265 Pfam PF05050 Methyltransferase FkbM domain 29 176 8.4E-19 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS13005 c89522991f9bf1b6edb7147599976672 265 SUPERFAMILY SSF53335 17 191 3.32E-22 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS13005 c89522991f9bf1b6edb7147599976672 265 Gene3D G3DSA:3.40.50.150 8 196 1.8E-21 T 29-03-2018 AM474_RS13005 c89522991f9bf1b6edb7147599976672 265 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 27 164 2.2E-25 T 29-03-2018 IPR006342 Methyltransferase FkbM AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 Pfam PF07690 Major Facilitator Superfamily 25 370 2.8E-44 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 Gene3D G3DSA:1.20.1250.20 17 214 5.1E-31 T 29-03-2018 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 Gene3D G3DSA:1.20.1250.20 215 417 2.4E-21 T 29-03-2018 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 354 377 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 150 172 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 120 141 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 266 286 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 31 47 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 319 339 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 93 117 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 178 198 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 PRINTS PR01035 Tetracycline resistance protein signature 294 315 9.9E-56 T 29-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AM474_RS24580 26e14e34d1a1288a018cc9a95ee4e8ad 422 SUPERFAMILY SSF103473 19 416 2.49E-61 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00255 cd3c4210b81d426cc3a4839f4a91e14b 339 Gene3D G3DSA:3.20.20.140 1 338 6.8E-48 T 29-03-2018 AM474_RS00255 cd3c4210b81d426cc3a4839f4a91e14b 339 SUPERFAMILY SSF51556 2 334 2.16E-69 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS00255 cd3c4210b81d426cc3a4839f4a91e14b 339 Pfam PF04909 Amidohydrolase 3 333 3.0E-28 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS05275 aec2e2893aae6146b3cf1f750e8ccd75 146 Pfam PF07813 LTXXQ motif family protein 43 123 5.7E-7 T 29-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 AM474_RS05910 385f902cc19544918938f951d5c3d728 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 250 3.1E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05910 385f902cc19544918938f951d5c3d728 256 Gene3D G3DSA:1.10.3720.10 4 256 6.7E-27 T 29-03-2018 AM474_RS05910 385f902cc19544918938f951d5c3d728 256 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 9 253 9.6E-74 T 29-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 AM474_RS05910 385f902cc19544918938f951d5c3d728 256 SUPERFAMILY SSF161098 61 243 1.18E-29 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS16470 8a21fbf5fdec2335acc79c63beb61825 293 Gene3D G3DSA:3.40.190.10 57 291 5.8E-16 T 29-03-2018 AM474_RS16470 8a21fbf5fdec2335acc79c63beb61825 293 SUPERFAMILY SSF53850 64 285 3.48E-31 T 29-03-2018 AM474_RS16470 8a21fbf5fdec2335acc79c63beb61825 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 285 1.8E-15 T 29-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AM474_RS28050 f4043cb47a34e3ea9b3d9b8cde26de5f 341 Gene3D G3DSA:2.40.160.20 67 305 6.9E-5 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 SMART SM00345 8 65 3.3E-9 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 Pfam PF07729 FCD domain 77 211 1.0E-17 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 SMART SM00895 75 212 3.0E-22 T 29-03-2018 IPR011711 GntR, C-terminal AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 SUPERFAMILY SSF46785 6 94 5.16E-14 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 SUPERFAMILY SSF48008 71 214 1.7E-17 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 Gene3D G3DSA:1.10.10.10 2 73 5.4E-16 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 63 6.3E-12 T 29-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AM474_RS18670 c9d9571520ea49129b1e2735f8edb666 237 Gene3D G3DSA:1.20.120.530 74 219 2.0E-27 T 29-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal AM474_RS32270 e4e3e6599580022b9717e352cd3322a9 428 Gene3D G3DSA:1.20.1600.10 24 425 5.1E-66 T 29-03-2018 AM474_RS32270 e4e3e6599580022b9717e352cd3322a9 428 Pfam PF02321 Outer membrane efflux protein 43 213 6.8E-26 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32270 e4e3e6599580022b9717e352cd3322a9 428 Pfam PF02321 Outer membrane efflux protein 246 420 4.6E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS32270 e4e3e6599580022b9717e352cd3322a9 428 SUPERFAMILY SSF56954 11 422 8.63E-80 T 29-03-2018 AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 Gene3D G3DSA:3.10.350.10 18 93 1.1E-14 T 29-03-2018 AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 SUPERFAMILY SSF51261 36 228 2.04E-45 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 Pfam PF01476 LysM domain 36 76 3.1E-14 T 29-03-2018 IPR018392 LysM domain AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 SMART SM00257 35 79 3.5E-11 T 29-03-2018 IPR018392 LysM domain AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 Gene3D G3DSA:2.70.70.10 94 230 5.6E-34 T 29-03-2018 AM474_RS18580 04df5e6187f32b81922140b3213cc99c 231 Pfam PF01551 Peptidase family M23 131 224 7.8E-28 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS30330 fc5e1fd34f804b5fe328bfbc0833baf2 294 Gene3D G3DSA:1.20.1440.70 8 129 3.5E-61 T 29-03-2018 IPR028997 PA2201-like, N-terminal AM474_RS30330 fc5e1fd34f804b5fe328bfbc0833baf2 294 Pfam PF08929 Domain of unknown function (DUF1911) 177 284 3.2E-23 T 29-03-2018 IPR015025 Domain of unknown function DUF1911 AM474_RS30330 fc5e1fd34f804b5fe328bfbc0833baf2 294 SUPERFAMILY SSF140486 6 129 1.27E-60 T 29-03-2018 IPR028997 PA2201-like, N-terminal AM474_RS30330 fc5e1fd34f804b5fe328bfbc0833baf2 294 SUPERFAMILY SSF140731 137 291 4.71E-44 T 29-03-2018 IPR028983 PA2201-like, C-terminal AM474_RS30330 fc5e1fd34f804b5fe328bfbc0833baf2 294 Gene3D G3DSA:1.10.3920.10 137 292 1.4E-30 T 29-03-2018 IPR028983 PA2201-like, C-terminal AM474_RS21555 b1890bbc84f5eefd09bb1ac704f70578 190 Pfam PF04011 LemA family 9 185 5.1E-57 T 29-03-2018 IPR007156 LemA AM474_RS21555 b1890bbc84f5eefd09bb1ac704f70578 190 SUPERFAMILY SSF140478 26 177 3.01E-45 T 29-03-2018 IPR023353 LemA-like domain AM474_RS21555 b1890bbc84f5eefd09bb1ac704f70578 190 Gene3D G3DSA:1.20.1440.20 14 186 1.4E-47 T 29-03-2018 AM474_RS08850 d51d2ad6e32259837d28c99976f03a9e 307 Gene3D G3DSA:3.40.50.1820 2 295 2.5E-41 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS08850 d51d2ad6e32259837d28c99976f03a9e 307 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 12 160 1.4E-14 T 29-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AM474_RS08850 d51d2ad6e32259837d28c99976f03a9e 307 SUPERFAMILY SSF53474 5 175 5.5E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS08850 d51d2ad6e32259837d28c99976f03a9e 307 SUPERFAMILY SSF53474 217 296 5.5E-50 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS22325 c8ee9337d83cb7695c24ed821169febe 81 Pfam PF06611 Protein of unknown function (DUF1145) 4 58 7.7E-14 T 29-03-2018 IPR009525 Protein of unknown function DUF1145 AM474_RS24895 a441fb16cf0ec1c7bad2dc191d099e24 199 Pfam PF06930 Protein of unknown function (DUF1282) 8 179 8.0E-57 T 29-03-2018 IPR009698 Protein of unknown function DUF1282 AM474_RS18180 92bf0aff624cba14ba9e2114e6ff5989 216 SUPERFAMILY SSF56112 15 157 2.51E-15 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS18180 92bf0aff624cba14ba9e2114e6ff5989 216 Gene3D G3DSA:3.90.1200.10 28 215 9.9E-7 T 29-03-2018 AM474_RS02775 ed30cb29ee768be120b58ef48dc85982 291 Pfam PF13614 AAA domain 1 168 1.1E-25 T 29-03-2018 IPR025669 AAA domain AM474_RS02775 ed30cb29ee768be120b58ef48dc85982 291 SUPERFAMILY SSF52540 1 266 6.82E-44 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02775 ed30cb29ee768be120b58ef48dc85982 291 Gene3D G3DSA:3.40.50.300 1 277 2.5E-47 T 29-03-2018 AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF101821 78 190 1.1E-24 T 29-03-2018 AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 8 349 1.8E-171 T 29-03-2018 IPR017537 Peptidase M42, hydrolase AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 Pfam PF05343 M42 glutamyl aminopeptidase 53 341 8.9E-74 T 29-03-2018 IPR008007 Peptidase M42 AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 Gene3D G3DSA:3.40.630.10 6 348 1.6E-38 T 29-03-2018 AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF53187 13 88 1.37E-44 T 29-03-2018 AM474_RS06710 0678df4490dc2a64903bf5d86c525e69 398 SUPERFAMILY SSF53187 182 348 1.37E-44 T 29-03-2018 AM474_RS03260 63359710a67510adf915eeb5d1fcc040 322 SUPERFAMILY SSF54909 13 316 2.68E-95 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS03260 63359710a67510adf915eeb5d1fcc040 322 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 14 309 3.9E-79 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM474_RS03260 63359710a67510adf915eeb5d1fcc040 322 Pfam PF04261 Dyp-type peroxidase family 14 309 9.4E-87 T 29-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 AM474_RS16700 801e7f77996d56b1e156f376246ea866 103 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 39 103 5.2E-32 T 29-03-2018 IPR012662 Conserved hypothetical protein CHP02449 AM474_RS02790 a12e0943b8d5b0c3648dc52c6a6dd446 186 Pfam PF11198 Protein of unknown function (DUF2857) 8 182 4.6E-63 T 29-03-2018 IPR021364 Protein of unknown function DUF2857 AM474_RS03335 e8550e542fe42758355d950f61902b58 375 Gene3D G3DSA:3.40.630.10 101 368 1.3E-39 T 29-03-2018 AM474_RS03335 e8550e542fe42758355d950f61902b58 375 Pfam PF00246 Zinc carboxypeptidase 134 339 4.4E-18 T 29-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AM474_RS03335 e8550e542fe42758355d950f61902b58 375 SUPERFAMILY SSF53187 107 373 2.14E-52 T 29-03-2018 AM474_RS26945 1776b5d56bb0b0baa8c165a2b0241b2b 202 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 178 8.2E-86 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS26945 1776b5d56bb0b0baa8c165a2b0241b2b 202 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 179 5.2E-84 T 29-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AM474_RS26945 1776b5d56bb0b0baa8c165a2b0241b2b 202 SUPERFAMILY SSF46626 15 192 7.07E-31 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26945 1776b5d56bb0b0baa8c165a2b0241b2b 202 Gene3D G3DSA:1.10.760.10 35 202 1.7E-26 T 29-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM474_RS26615 8d1975b40e3a5bbab3d869b8578ef0e7 421 SUPERFAMILY SSF82544 4 418 5.75E-147 T 29-03-2018 AM474_RS26615 8d1975b40e3a5bbab3d869b8578ef0e7 421 Pfam PF05161 MOFRL family 307 412 1.9E-35 T 29-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 AM474_RS26615 8d1975b40e3a5bbab3d869b8578ef0e7 421 Gene3D G3DSA:3.40.50.10180 11 242 3.9E-83 T 29-03-2018 AM474_RS26615 8d1975b40e3a5bbab3d869b8578ef0e7 421 Gene3D G3DSA:3.40.1480.10 243 421 9.0E-62 T 29-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 AM474_RS26615 8d1975b40e3a5bbab3d869b8578ef0e7 421 Pfam PF13660 Domain of unknown function (DUF4147) 9 228 1.7E-79 T 29-03-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 AM474_RS16315 5994d136031f197dda57f924e213b853 619 SUPERFAMILY SSF100950 279 527 3.52E-46 T 29-03-2018 AM474_RS16315 5994d136031f197dda57f924e213b853 619 SUPERFAMILY SSF100950 202 244 3.52E-46 T 29-03-2018 AM474_RS16315 5994d136031f197dda57f924e213b853 619 Gene3D G3DSA:3.40.1080.10 207 540 1.0E-73 T 29-03-2018 AM474_RS16315 5994d136031f197dda57f924e213b853 619 Gene3D G3DSA:3.40.1080.10 1 196 4.9E-17 T 29-03-2018 AM474_RS16315 5994d136031f197dda57f924e213b853 619 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 341 500 5.6E-45 T 29-03-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain AM474_RS21955 172336d328560322caeb0920afb71a7e 489 Pfam PF01384 Phosphate transporter family 30 478 1.7E-85 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM474_RS25685 2ed90014999ce20ee8b6aa3b61d05dbd 110 Gene3D G3DSA:1.20.120.20 2 91 2.4E-4 T 29-03-2018 AM474_RS25685 2ed90014999ce20ee8b6aa3b61d05dbd 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 19 109 1.2E-24 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM474_RS12870 ba10126147c184f74c48b1c15af73615 332 Gene3D G3DSA:3.40.50.1820 31 328 7.2E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12870 ba10126147c184f74c48b1c15af73615 332 Pfam PF00561 alpha/beta hydrolase fold 60 308 2.2E-17 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS12870 ba10126147c184f74c48b1c15af73615 332 SUPERFAMILY SSF53474 24 310 1.67E-44 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS12870 ba10126147c184f74c48b1c15af73615 332 PIRSF PIRSF005211 1 332 2.4E-113 T 29-03-2018 IPR012020 AB hydrolase 4 family AM474_RS12870 ba10126147c184f74c48b1c15af73615 332 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 233 274 - T 29-03-2018 IPR000952 AB hydrolase 4, conserved site AM474_RS01975 e85f14787e089b35cccddb2c9b35a6f5 124 Pfam PF16703 Domain of unknown function (DUF5064) 1 115 5.4E-46 T 29-03-2018 IPR032024 Protein of unknown function DUF5064 AM474_RS19675 61335bac7a38688e5aec3bf526e2070b 297 Pfam PF04228 Putative neutral zinc metallopeptidase 1 292 2.1E-136 T 29-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 SUPERFAMILY SSF52833 3 194 1.25E-66 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 PIRSF PIRSF000239 1 199 3.0E-59 T 29-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 Gene3D G3DSA:3.40.30.10 4 161 1.2E-38 T 29-03-2018 AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 Gene3D G3DSA:3.30.1020.10 162 199 7.9E-18 T 29-03-2018 AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF00578 AhpC/TSA family 5 139 4.0E-33 T 29-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS06970 4753120b7a07a97bcafd8db12c3c6536 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 2.9E-14 T 29-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM474_RS25245 509ea7025eae9345e9fd8d0fd90f9bcc 220 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 208 1.6E-53 T 29-03-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 AM474_RS25245 509ea7025eae9345e9fd8d0fd90f9bcc 220 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 202 1.8E-58 T 29-03-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 AM474_RS25245 509ea7025eae9345e9fd8d0fd90f9bcc 220 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 45 2.0E-12 T 29-03-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 43 68 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 7.5E-18 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 9.3E-62 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 SUPERFAMILY SSF118215 17 398 4.32E-95 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 Gene3D G3DSA:1.10.3860.10 6 406 7.9E-74 T 29-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM474_RS29525 e06452945fadf276e7e9ba5b38ea2efe 409 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 36.604 T 29-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 AM474_RS27300 048bfaf465b76b03b151557fc47bf559 355 Pfam PF01594 AI-2E family transporter 11 338 1.1E-39 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM474_RS21065 9c96050bcb591bc4db01df1bf5eb0666 154 SUPERFAMILY SSF55804 1 147 1.29E-41 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS21065 9c96050bcb591bc4db01df1bf5eb0666 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 147 1.0E-34 T 29-03-2018 IPR002178 PTS EIIA type-2 domain AM474_RS21065 9c96050bcb591bc4db01df1bf5eb0666 154 Gene3D G3DSA:3.40.930.10 2 151 4.5E-40 T 29-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 AM474_RS21065 9c96050bcb591bc4db01df1bf5eb0666 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 149 8.8E-61 T 29-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 AM474_RS09115 56ee0c3dff1fdad7a2861dbe6328a0df 131 PIRSF PIRSF037181 1 130 5.6E-53 T 29-03-2018 IPR014958 DGC AM474_RS09115 56ee0c3dff1fdad7a2861dbe6328a0df 131 Pfam PF08859 DGC domain 13 115 8.2E-31 T 29-03-2018 IPR014958 DGC AM474_RS26405 83d5dbc190d12218af8c67335fa64e60 262 Pfam PF04344 Chemotaxis phosphatase, CheZ 50 262 3.0E-75 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM474_RS26405 83d5dbc190d12218af8c67335fa64e60 262 PIRSF PIRSF002884 26 262 3.5E-94 T 29-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 AM474_RS26405 83d5dbc190d12218af8c67335fa64e60 262 SUPERFAMILY SSF75708 38 261 1.18E-61 T 29-03-2018 AM474_RS26405 83d5dbc190d12218af8c67335fa64e60 262 Gene3D G3DSA:1.10.287.500 75 203 4.2E-18 T 29-03-2018 AM474_RS16540 2f5f4f856f1048ee8db01a6971a0dd0a 163 SUPERFAMILY SSF158442 10 158 3.01E-38 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM474_RS16540 2f5f4f856f1048ee8db01a6971a0dd0a 163 Pfam PF02600 Disulfide bond formation protein DsbB 7 157 4.7E-39 T 29-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM474_RS16540 2f5f4f856f1048ee8db01a6971a0dd0a 163 Gene3D G3DSA:1.20.1550.10 1 163 3.2E-43 T 29-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain AM474_RS16540 2f5f4f856f1048ee8db01a6971a0dd0a 163 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 2 163 22.314 T 29-03-2018 IPR022920 Disulphide bond formation protein DsbB AM474_RS01920 e988d85fcbb0a20776f4398d5e602117 135 Gene3D G3DSA:1.10.10.60 4 43 6.1E-5 T 29-03-2018 AM474_RS01920 e988d85fcbb0a20776f4398d5e602117 135 Gene3D G3DSA:1.10.260.40 44 123 4.3E-5 T 29-03-2018 AM474_RS28875 dda3deae263e830ff22023f3bfdd5dea 408 Pfam PF10783 Protein of unknown function (DUF2599) 302 408 2.4E-27 T 29-03-2018 IPR019719 Protein of unknown function DUF2599 AM474_RS27280 6379d59b23983a664ec681375c7b0693 270 Pfam PF12697 Alpha/beta hydrolase family 5 252 1.4E-12 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS27280 6379d59b23983a664ec681375c7b0693 270 Gene3D G3DSA:3.40.50.1820 3 270 2.1E-28 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27280 6379d59b23983a664ec681375c7b0693 270 SUPERFAMILY SSF53474 5 258 4.32E-31 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10555 e07e93c2bcfbc1dcc4e2cddd293d35eb 418 Gene3D G3DSA:2.40.160.10 14 418 3.6E-119 T 29-03-2018 AM474_RS10555 e07e93c2bcfbc1dcc4e2cddd293d35eb 418 Pfam PF03573 outer membrane porin, OprD family 28 416 1.6E-149 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS31945 da832ecfb782224ca992a15819e342c8 381 Pfam PF14436 Bacterial EndoU nuclease 254 380 9.9E-6 T 29-03-2018 IPR029501 Bacterial EndoU nuclease AM474_RS30925 c209027b3bc9711ccd3017c047a9cee8 435 SUPERFAMILY SSF103473 5 417 5.23E-86 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS30925 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 221 425 5.6E-34 T 29-03-2018 AM474_RS30925 c209027b3bc9711ccd3017c047a9cee8 435 Gene3D G3DSA:1.20.1250.20 2 207 2.9E-32 T 29-03-2018 AM474_RS30925 c209027b3bc9711ccd3017c047a9cee8 435 Pfam PF07690 Major Facilitator Superfamily 18 375 3.4E-56 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS30925 c209027b3bc9711ccd3017c047a9cee8 435 PIRSF PIRSF002808 3 428 1.6E-35 T 29-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AM474_RS11710 52774d007bf861e9c727dd59e555c360 180 SUPERFAMILY SSF55083 5 152 5.36E-38 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS11710 52774d007bf861e9c727dd59e555c360 180 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 130 3.8E-22 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS11710 52774d007bf861e9c727dd59e555c360 180 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 130 6.7E-23 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS11710 52774d007bf861e9c727dd59e555c360 180 Gene3D G3DSA:3.30.70.560 3 155 1.3E-35 T 29-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM474_RS02630 fddc76f6cd9633914f68fa1b935e4a6e 247 SUPERFAMILY SSF56784 11 236 2.57E-28 T 29-03-2018 IPR023214 HAD-like domain AM474_RS02630 fddc76f6cd9633914f68fa1b935e4a6e 247 Gene3D G3DSA:3.40.50.1000 5 247 2.1E-10 T 29-03-2018 IPR023214 HAD-like domain AM474_RS12895 4dac2fbe8f6e07626118c1ce17fb96f4 531 Gene3D G3DSA:3.50.50.60 14 531 3.6E-59 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12895 4dac2fbe8f6e07626118c1ce17fb96f4 531 Pfam PF05199 GMC oxidoreductase 384 518 4.7E-22 T 29-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AM474_RS12895 4dac2fbe8f6e07626118c1ce17fb96f4 531 SUPERFAMILY SSF51905 22 295 1.22E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12895 4dac2fbe8f6e07626118c1ce17fb96f4 531 SUPERFAMILY SSF51905 465 528 1.22E-56 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS12895 4dac2fbe8f6e07626118c1ce17fb96f4 531 Pfam PF00732 GMC oxidoreductase 32 296 1.7E-49 T 29-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AM474_RS12610 b330a25f88af24817bc759b466da568c 240 Pfam PF04452 RNA methyltransferase 19 233 4.9E-71 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS12610 b330a25f88af24817bc759b466da568c 240 Gene3D G3DSA:3.40.1280.10 73 240 2.1E-61 T 29-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM474_RS12610 b330a25f88af24817bc759b466da568c 240 SUPERFAMILY SSF75217 74 239 4.8E-54 T 29-03-2018 IPR029028 Alpha/beta knot methyltransferases AM474_RS12610 b330a25f88af24817bc759b466da568c 240 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 237 1.6E-61 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS12610 b330a25f88af24817bc759b466da568c 240 Gene3D G3DSA:2.40.240.20 1 71 8.7E-20 T 29-03-2018 AM474_RS12610 b330a25f88af24817bc759b466da568c 240 PIRSF PIRSF015601 3 238 1.3E-58 T 29-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AM474_RS12610 b330a25f88af24817bc759b466da568c 240 SUPERFAMILY SSF88697 3 69 7.46E-16 T 29-03-2018 IPR015947 PUA-like domain AM474_RS26465 484b6f0c63c05f7317dc5e5fff0c8537 240 Gene3D G3DSA:3.60.140.10 6 240 2.2E-53 T 29-03-2018 AM474_RS26465 484b6f0c63c05f7317dc5e5fff0c8537 240 SUPERFAMILY SSF64438 26 224 3.11E-47 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM474_RS26465 484b6f0c63c05f7317dc5e5fff0c8537 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 226 5.7E-46 T 29-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 42 52 7.6E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 60 74 7.6E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 PRINTS PR00355 Adrenodoxin signature 83 91 7.6E-10 T 29-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 SUPERFAMILY SSF54292 4 106 1.39E-34 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.2E-58 T 29-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 Gene3D G3DSA:3.10.20.30 5 111 1.5E-33 T 29-03-2018 IPR012675 Beta-grasp domain AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 29-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM474_RS08745 0d83393a0151cdca5df4206f9281d85d 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 5.4E-17 T 29-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM474_RS06975 62b7e4add30efee3d1f783f2f85cd2e7 73 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 1.1E-11 T 29-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain AM474_RS07735 8ec80803b414ad96b6001767a13a1d1b 226 Pfam PF13852 Protein of unknown function (DUF4197) 25 223 6.5E-76 T 29-03-2018 IPR025245 Protein of unknown function DUF4197 AM474_RS21490 e68ebd8e0100c9352ec631ae186aa7bf 264 Gene3D G3DSA:1.20.144.10 8 245 6.2E-12 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS21490 e68ebd8e0100c9352ec631ae186aa7bf 264 SUPERFAMILY SSF48317 19 232 1.96E-11 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS21490 e68ebd8e0100c9352ec631ae186aa7bf 264 Pfam PF01569 PAP2 superfamily 100 229 1.2E-14 T 29-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AM474_RS29515 40be66e21af4e490c5b82a5c04b53fd5 456 PIRSF PIRSF006060 1 454 3.2E-78 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS29515 40be66e21af4e490c5b82a5c04b53fd5 456 Pfam PF00324 Amino acid permease 22 380 8.0E-39 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS10510 a2d18888d55216da9f3d1165d9a79c75 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 6.6E-62 T 29-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AM474_RS10510 a2d18888d55216da9f3d1165d9a79c75 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.2E-129 T 29-03-2018 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 AM474_RS10510 a2d18888d55216da9f3d1165d9a79c75 268 Gene3D G3DSA:3.20.20.60 3 250 7.7E-53 T 29-03-2018 AM474_RS10510 a2d18888d55216da9f3d1165d9a79c75 268 SUPERFAMILY SSF51621 3 254 5.58E-85 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 SUPERFAMILY SSF53659 5 334 1.32E-101 T 29-03-2018 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 Pfam PF02504 Fatty acid synthesis protein 6 325 3.5E-96 T 29-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 336 140.598 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 PIRSF PIRSF002465 3 335 1.3E-121 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 333 5.7E-100 T 29-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM474_RS04045 d76682d2ac9749f7dce41b5e1599eaab 336 Gene3D G3DSA:3.40.718.10 2 335 2.3E-108 T 29-03-2018 AM474_RS12340 0c846cb9d6aca292a22c2ff46ff5dd92 285 Pfam PF13672 Protein phosphatase 2C 8 253 4.3E-42 T 29-03-2018 AM474_RS12340 0c846cb9d6aca292a22c2ff46ff5dd92 285 SUPERFAMILY SSF81606 203 223 3.14E-7 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS12340 0c846cb9d6aca292a22c2ff46ff5dd92 285 SUPERFAMILY SSF81606 15 158 3.14E-7 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS12340 0c846cb9d6aca292a22c2ff46ff5dd92 285 Gene3D G3DSA:3.60.40.10 6 284 7.5E-8 T 29-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 AM474_RS14215 f5c9f15e6896c9d4b9ed553ac4c76c17 211 SUPERFAMILY SSF52833 50 207 2.43E-49 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS14215 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Pfam PF02630 SCO1/SenC 48 185 3.2E-37 T 29-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM474_RS14215 f5c9f15e6896c9d4b9ed553ac4c76c17 211 Gene3D G3DSA:3.40.30.10 46 207 9.7E-32 T 29-03-2018 AM474_RS01520 34772a94579636859074fa931c040421 284 Pfam PF14267 Domain of unknown function (DUF4357) 224 277 1.3E-21 T 29-03-2018 IPR025579 Domain of unknown function DUF4357 AM474_RS01520 34772a94579636859074fa931c040421 284 Gene3D G3DSA:3.40.1440.10 43 145 4.2E-4 T 29-03-2018 IPR000305 GIY-YIG nuclease superfamily AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SUPERFAMILY SSF50249 1 70 1.44E-28 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 29-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SMART SM00316 4 72 1.7E-6 T 29-03-2018 IPR022967 RNA-binding domain, S1 AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.7E-27 T 29-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM474_RS00935 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Gene3D G3DSA:2.40.50.140 1 72 9.4E-36 T 29-03-2018 AM474_RS21130 c0b82c26858270dedeab9e498ba386cd 79 PIRSF PIRSF003113 1 79 5.8E-16 T 29-03-2018 IPR002634 BolA protein AM474_RS21130 c0b82c26858270dedeab9e498ba386cd 79 Pfam PF01722 BolA-like protein 22 70 9.5E-8 T 29-03-2018 IPR002634 BolA protein AM474_RS21130 c0b82c26858270dedeab9e498ba386cd 79 SUPERFAMILY SSF82657 1 78 1.22E-21 T 29-03-2018 IPR002634 BolA protein AM474_RS21130 c0b82c26858270dedeab9e498ba386cd 79 Gene3D G3DSA:3.30.300.90 1 79 7.4E-18 T 29-03-2018 AM474_RS17065 7de455c5dfcf37fac128083755f7c763 406 Gene3D G3DSA:3.40.50.150 40 274 2.8E-6 T 29-03-2018 AM474_RS17065 7de455c5dfcf37fac128083755f7c763 406 Pfam PF13679 Methyltransferase domain 131 236 1.1E-12 T 29-03-2018 IPR025714 Methyltransferase domain AM474_RS17065 7de455c5dfcf37fac128083755f7c763 406 SUPERFAMILY SSF53335 124 191 2.69E-6 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS14810 87d6fc3cb1d2c1437a80ccbe4973ff4d 183 SUPERFAMILY SSF48150 1 181 1.02E-75 T 29-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM474_RS14810 87d6fc3cb1d2c1437a80ccbe4973ff4d 183 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 8.0E-89 T 29-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 AM474_RS14810 87d6fc3cb1d2c1437a80ccbe4973ff4d 183 Gene3D G3DSA:1.10.340.30 1 178 7.8E-75 T 29-03-2018 AM474_RS14810 87d6fc3cb1d2c1437a80ccbe4973ff4d 183 Pfam PF03352 Methyladenine glycosylase 6 177 4.8E-71 T 29-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AM474_RS28200 61a3e6540a6532be613dffa9f9ffc506 443 Pfam PF01145 SPFH domain / Band 7 family 33 287 1.4E-38 T 29-03-2018 IPR001107 Band 7 domain AM474_RS30285 feca6038fce26182b14ae343698e0386 88 Pfam PF00128 Alpha amylase, catalytic domain 28 58 5.0E-5 T 29-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AM474_RS30285 feca6038fce26182b14ae343698e0386 88 Gene3D G3DSA:3.20.20.80 2 83 3.3E-18 T 29-03-2018 AM474_RS30285 feca6038fce26182b14ae343698e0386 88 SUPERFAMILY SSF51445 5 57 2.94E-17 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 Pfam PF02867 Ribonucleotide reductase, barrel domain 122 670 4.0E-141 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 412 434 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 197 216 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 374 397 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 336 347 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 440 463 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 PRINTS PR01183 Ribonucleotide reductase large chain signature 528 555 2.6E-18 T 29-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 Gene3D G3DSA:3.20.70.20 22 676 1.4E-150 T 29-03-2018 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 SUPERFAMILY SSF51998 302 460 6.71E-177 T 29-03-2018 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 SUPERFAMILY SSF51998 35 239 6.71E-177 T 29-03-2018 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 SUPERFAMILY SSF51998 528 710 6.71E-177 T 29-03-2018 AM474_RS15260 a349c5c9f4c658321cd5cc987228431b 734 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 43 678 1.8E-182 T 29-03-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM474_RS10875 065eafd9f15f218b5788e01cd02a4a0d 148 Pfam PF07681 DoxX 15 95 2.6E-15 T 29-03-2018 IPR032808 DoxX family AM474_RS15970 a25ba2295316593eaacb6926553fffe4 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 326 551 6.5E-18 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS15970 a25ba2295316593eaacb6926553fffe4 558 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 290 550 2.0E-74 T 29-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM474_RS15970 a25ba2295316593eaacb6926553fffe4 558 Gene3D G3DSA:1.10.3720.10 227 555 4.0E-39 T 29-03-2018 AM474_RS15970 a25ba2295316593eaacb6926553fffe4 558 SUPERFAMILY SSF161098 285 540 2.75E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 Pfam PF13356 Arm DNA-binding domain 2 89 1.0E-16 T 29-03-2018 IPR025166 Integrase, DNA-binding domain AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 151 3.5E-8 T 29-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 Gene3D G3DSA:1.10.150.130 87 199 2.5E-16 T 29-03-2018 IPR023109 Integrase/recombinase, N-terminal AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 Pfam PF00589 Phage integrase family 214 375 1.5E-20 T 29-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 SUPERFAMILY SSF56349 98 385 2.15E-58 T 29-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM474_RS08535 682b264751d686dbd4a5170bc604ab28 418 Gene3D G3DSA:1.10.443.10 202 384 3.6E-26 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS32305 2dbb8996ee5b69853d1951ed270df309 426 Pfam PF13437 HlyD family secretion protein 200 302 6.2E-9 T 29-03-2018 AM474_RS32305 2dbb8996ee5b69853d1951ed270df309 426 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 392 4.2E-81 T 29-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM474_RS32305 2dbb8996ee5b69853d1951ed270df309 426 SUPERFAMILY SSF111369 78 315 1.57E-60 T 29-03-2018 AM474_RS32305 2dbb8996ee5b69853d1951ed270df309 426 Gene3D G3DSA:1.20.1600.10 61 306 5.6E-27 T 29-03-2018 AM474_RS32305 2dbb8996ee5b69853d1951ed270df309 426 Pfam PF13533 Biotin-lipoyl like 89 136 4.4E-15 T 29-03-2018 AM474_RS01335 e57edfa844130623fab8923e51619897 93 TIGRFAM TIGR03510 XapX: XapX domain 4 48 3.6E-19 T 29-03-2018 IPR020017 XapX domain AM474_RS01335 e57edfa844130623fab8923e51619897 93 Pfam PF07235 Protein of unknown function (DUF1427) 2 83 1.8E-36 T 29-03-2018 IPR009872 Protein of unknown function DUF1427 AM474_RS29640 c6c2ece73e8f89288dedda361676c20d 351 Gene3D G3DSA:2.40.128.130 229 349 3.1E-6 T 29-03-2018 AM474_RS29640 c6c2ece73e8f89288dedda361676c20d 351 Pfam PF05275 Copper resistance protein B precursor (CopB) 147 351 8.7E-93 T 29-03-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AM474_RS03375 24d96df789cdb3dc10b6f51f97c41b35 256 PIRSF PIRSF006157 1 256 1.3E-92 T 29-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AM474_RS03375 24d96df789cdb3dc10b6f51f97c41b35 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 255 6.6E-50 T 29-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AM474_RS03375 24d96df789cdb3dc10b6f51f97c41b35 256 Gene3D G3DSA:3.40.830.10 1 256 3.4E-90 T 29-03-2018 AM474_RS03375 24d96df789cdb3dc10b6f51f97c41b35 256 SUPERFAMILY SSF53213 1 256 2.62E-93 T 29-03-2018 AM474_RS08635 08fb7efa57598dacfe86be9acb9a73e1 282 Pfam PF01551 Peptidase family M23 179 273 9.1E-29 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS08635 08fb7efa57598dacfe86be9acb9a73e1 282 SUPERFAMILY SSF51261 85 277 2.62E-49 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS08635 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.60.40.1590 31 123 8.4E-35 T 29-03-2018 AM474_RS08635 08fb7efa57598dacfe86be9acb9a73e1 282 Gene3D G3DSA:2.70.70.10 124 282 5.3E-43 T 29-03-2018 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 Pfam PF01420 Type I restriction modification DNA specificity domain 194 356 2.5E-18 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 Pfam PF01420 Type I restriction modification DNA specificity domain 63 167 4.9E-9 T 29-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 SUPERFAMILY SSF116734 6 192 9.65E-27 T 29-03-2018 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 Gene3D G3DSA:3.90.220.20 175 362 1.7E-28 T 29-03-2018 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 Gene3D G3DSA:3.90.220.20 1 171 6.8E-21 T 29-03-2018 AM474_RS01565 28df7eab739bb7272023cabce288f595 383 SUPERFAMILY SSF116734 193 374 9.32E-33 T 29-03-2018 AM474_RS29650 31b674f249422f884120a332f6588794 212 Gene3D G3DSA:3.40.50.620 18 139 1.4E-16 T 29-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM474_RS29650 31b674f249422f884120a332f6588794 212 Pfam PF02698 DUF218 domain 27 131 1.7E-14 T 29-03-2018 IPR003848 Domain of unknown function DUF218 AM474_RS26580 4be7f8f3885a4e1e2019931ddd166ebc 118 Pfam PF09152 Domain of unknown function (DUF1937) 2 112 4.3E-49 T 29-03-2018 IPR015235 Domain of unknown function DUF1937 AM474_RS26580 4be7f8f3885a4e1e2019931ddd166ebc 118 Gene3D G3DSA:3.40.50.10400 1 118 4.5E-24 T 29-03-2018 IPR027269 Hypothetical PA1492 domain AM474_RS26580 4be7f8f3885a4e1e2019931ddd166ebc 118 SUPERFAMILY SSF52309 1 117 2.38E-42 T 29-03-2018 AM474_RS13615 72319c5464e65262f7990b7ed8f6875a 277 Gene3D G3DSA:2.40.230.20 18 276 4.1E-58 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS13615 72319c5464e65262f7990b7ed8f6875a 277 SUPERFAMILY SSF111364 23 276 1.7E-51 T 29-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 AM474_RS01150 a205915bbf47e9b3fe26e43c4c8fe224 297 Gene3D G3DSA:3.40.50.1820 2 274 3.6E-10 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS01150 a205915bbf47e9b3fe26e43c4c8fe224 297 SUPERFAMILY SSF53474 88 231 2.55E-7 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS07070 185e1a98eab8ef662ae37f105eb1e1b2 520 PIRSF PIRSF500217 1 520 6.1E-164 T 29-03-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 AM474_RS07070 185e1a98eab8ef662ae37f105eb1e1b2 520 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 148 355 8.4E-27 T 29-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AM474_RS07070 185e1a98eab8ef662ae37f105eb1e1b2 520 PIRSF PIRSF016636 474 520 0.084 T 29-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AM474_RS07070 185e1a98eab8ef662ae37f105eb1e1b2 520 PIRSF PIRSF016636 1 446 6.4E-159 T 29-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB AM474_RS18115 85d36f67aff361c91a9e30153d423f1d 354 Gene3D G3DSA:3.40.50.2000 1 163 8.8E-41 T 29-03-2018 AM474_RS18115 85d36f67aff361c91a9e30153d423f1d 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 314 1.1E-84 T 29-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AM474_RS18115 85d36f67aff361c91a9e30153d423f1d 354 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 296 2.9E-113 T 29-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 AM474_RS18115 85d36f67aff361c91a9e30153d423f1d 354 SUPERFAMILY SSF53756 1 348 3.3E-84 T 29-03-2018 AM474_RS18115 85d36f67aff361c91a9e30153d423f1d 354 Gene3D G3DSA:3.40.50.2000 166 353 5.6E-43 T 29-03-2018 AM474_RS31210 5174a07e7468b83eaac064c22f7bc159 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 168 1.5E-65 T 29-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 AM474_RS31210 5174a07e7468b83eaac064c22f7bc159 173 SUPERFAMILY SSF52540 7 167 1.75E-25 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS31210 5174a07e7468b83eaac064c22f7bc159 173 Gene3D G3DSA:3.40.50.300 4 173 8.9E-30 T 29-03-2018 AM474_RS31210 5174a07e7468b83eaac064c22f7bc159 173 Pfam PF13671 AAA domain 9 139 2.3E-10 T 29-03-2018 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 Gene3D G3DSA:1.10.3720.10 305 508 3.1E-23 T 29-03-2018 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 SUPERFAMILY SSF161098 8 250 3.01E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 Gene3D G3DSA:1.10.3720.10 12 250 1.9E-30 T 29-03-2018 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 SUPERFAMILY SSF161098 270 503 1.44E-31 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 333 496 4.9E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS19850 7f12225021fa2f4ae739362077010399 512 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 240 1.2E-13 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06525 ffc004f325f70cdcf9deb5fc0761256a 114 SUPERFAMILY SSF51182 19 112 3.43E-17 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS06525 ffc004f325f70cdcf9deb5fc0761256a 114 Gene3D G3DSA:2.60.120.10 6 114 4.6E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS06525 ffc004f325f70cdcf9deb5fc0761256a 114 Pfam PF05899 Protein of unknown function (DUF861) 37 109 6.2E-29 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS00870 af7cf248c264793a1eff95529b3eab1a 119 SUPERFAMILY SSF75169 4 118 5.72E-35 T 29-03-2018 IPR027396 DsrEFH-like AM474_RS00870 af7cf248c264793a1eff95529b3eab1a 119 Pfam PF02635 DsrE/DsrF-like family 4 118 2.0E-20 T 29-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein AM474_RS00870 af7cf248c264793a1eff95529b3eab1a 119 Gene3D G3DSA:3.40.1260.10 5 117 1.5E-21 T 29-03-2018 AM474_RS00870 af7cf248c264793a1eff95529b3eab1a 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 118 2.1E-40 T 29-03-2018 IPR017462 Sulphur relay, TusC/DsrF AM474_RS24150 56257b04611f8b52c8813ed0048bd070 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 1.2E-12 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24150 56257b04611f8b52c8813ed0048bd070 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 159 183 1.2E-12 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24150 56257b04611f8b52c8813ed0048bd070 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 129 148 1.2E-12 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24150 56257b04611f8b52c8813ed0048bd070 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 1.2E-12 T 29-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS24150 56257b04611f8b52c8813ed0048bd070 499 Pfam PF00361 Proton-conducting membrane transporter 124 417 6.3E-41 T 29-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS25095 46272d53886d5a4624c2b196668c7ed1 125 SUPERFAMILY SSF53850 40 96 5.43E-6 T 29-03-2018 AM474_RS25095 46272d53886d5a4624c2b196668c7ed1 125 Gene3D G3DSA:3.40.190.10 40 112 1.1E-10 T 29-03-2018 AM474_RS21070 a845a9808bd6253b683a15ea92535c19 102 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 1.2E-36 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM474_RS21070 a845a9808bd6253b683a15ea92535c19 102 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 1.1E-28 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM474_RS21070 a845a9808bd6253b683a15ea92535c19 102 SUPERFAMILY SSF69754 1 95 2.09E-35 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM474_RS21070 a845a9808bd6253b683a15ea92535c19 102 Gene3D G3DSA:3.30.160.100 1 96 6.5E-33 T 29-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AM474_RS07720 5c2ffce2784e724226ef5547bd00fe60 307 SUPERFAMILY SSF52540 2 229 4.37E-57 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS07720 5c2ffce2784e724226ef5547bd00fe60 307 Pfam PF00005 ABC transporter 18 160 5.2E-26 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS07720 5c2ffce2784e724226ef5547bd00fe60 307 SMART SM00382 26 216 3.0E-12 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS07720 5c2ffce2784e724226ef5547bd00fe60 307 Gene3D G3DSA:3.40.50.300 1 240 1.8E-60 T 29-03-2018 AM474_RS22915 8e0dceccd66c24c04e436402d4de1b47 139 Gene3D G3DSA:1.20.120.550 7 139 1.7E-14 T 29-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain AM474_RS22915 8e0dceccd66c24c04e436402d4de1b47 139 Pfam PF01124 MAPEG family 6 136 2.3E-21 T 29-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AM474_RS22915 8e0dceccd66c24c04e436402d4de1b47 139 SUPERFAMILY SSF161084 11 136 1.27E-16 T 29-03-2018 AM474_RS10230 dc619de539f05a35709e571a4bb0cdf7 192 Pfam PF11354 Protein of unknown function (DUF3156) 31 189 2.6E-55 T 29-03-2018 IPR021500 Protein of unknown function DUF3156 AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 SUPERFAMILY SSF53335 63 280 1.66E-46 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 34.188 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 4.6E-101 T 29-03-2018 AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 PIRSF PIRSF000401 1 293 7.4E-91 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 Gene3D G3DSA:3.40.50.150 100 294 1.4E-38 T 29-03-2018 AM474_RS18960 4fffba61575e11313c3e6dcb8ab3f455 294 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 2.7E-92 T 29-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AM474_RS17700 9148dbf3a08a3c2f981b3377f3e33152 735 Pfam PF13550 Putative phage tail protein 203 370 4.3E-13 T 29-03-2018 IPR032876 Tip attachment protein J AM474_RS13835 3e7bf2200b1e30bb08ccc08c9d9d3d5e 271 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 251 6.4E-35 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS13835 3e7bf2200b1e30bb08ccc08c9d9d3d5e 271 SUPERFAMILY SSF51197 9 253 2.52E-41 T 29-03-2018 AM474_RS13835 3e7bf2200b1e30bb08ccc08c9d9d3d5e 271 Gene3D G3DSA:3.60.130.10 4 261 4.0E-36 T 29-03-2018 AM474_RS10595 6844d108e053ec599eb937ff291f4188 471 SUPERFAMILY SSF56954 50 465 6.15E-83 T 29-03-2018 AM474_RS10595 6844d108e053ec599eb937ff291f4188 471 Gene3D G3DSA:1.20.1600.10 53 466 5.1E-78 T 29-03-2018 AM474_RS10595 6844d108e053ec599eb937ff291f4188 471 PIRSF PIRSF001892 1 471 1.4E-165 T 29-03-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 AM474_RS10595 6844d108e053ec599eb937ff291f4188 471 Pfam PF02321 Outer membrane efflux protein 276 463 2.1E-25 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS10595 6844d108e053ec599eb937ff291f4188 471 Pfam PF02321 Outer membrane efflux protein 58 240 8.5E-27 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS22175 53099b1fc12bc793337fcadcb2c442a6 220 Gene3D G3DSA:1.20.5.1000 36 113 1.5E-4 T 29-03-2018 AM474_RS25505 f1045b6674915ec11696af2f5b4cd1d5 424 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 424 4.6E-135 T 29-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM474_RS25505 f1045b6674915ec11696af2f5b4cd1d5 424 SUPERFAMILY SSF56935 24 424 8.55E-92 T 29-03-2018 AM474_RS25505 f1045b6674915ec11696af2f5b4cd1d5 424 Gene3D G3DSA:2.40.160.60 24 424 1.4E-82 T 29-03-2018 AM474_RS05500 76f5f09aed02de3068fb05a54fd47f1c 271 PIRSF PIRSF003092 1 271 1.1E-91 T 29-03-2018 IPR025501 ATP binding protein MinD AM474_RS05500 76f5f09aed02de3068fb05a54fd47f1c 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 1.3E-115 T 29-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 AM474_RS05500 76f5f09aed02de3068fb05a54fd47f1c 271 Gene3D G3DSA:3.40.50.300 1 255 8.9E-53 T 29-03-2018 AM474_RS05500 76f5f09aed02de3068fb05a54fd47f1c 271 SUPERFAMILY SSF52540 2 268 6.11E-52 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS05500 76f5f09aed02de3068fb05a54fd47f1c 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 226 8.2E-20 T 29-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AM474_RS23835 6073d5a58a9998f43c8fcfa33dc04a19 337 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 188 4.6E-23 T 29-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS23835 6073d5a58a9998f43c8fcfa33dc04a19 337 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 244 328 9.6E-27 T 29-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM474_RS23835 6073d5a58a9998f43c8fcfa33dc04a19 337 Gene3D G3DSA:3.40.47.10 221 329 3.8E-27 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23835 6073d5a58a9998f43c8fcfa33dc04a19 337 Gene3D G3DSA:3.40.47.10 5 220 7.7E-42 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS23835 6073d5a58a9998f43c8fcfa33dc04a19 337 SUPERFAMILY SSF53901 8 329 2.31E-56 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS29290 15e6a4380bda7d9de21c4c092a31727f 118 Pfam PF04237 YjbR 11 101 1.4E-13 T 29-03-2018 IPR007351 Uncharacterised protein YjbR AM474_RS29290 15e6a4380bda7d9de21c4c092a31727f 118 SUPERFAMILY SSF142906 1 114 1.03E-28 T 29-03-2018 AM474_RS07530 c81cbaed0ca34733f9baac241f94407b 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 94 32.351 T 29-03-2018 IPR023081 Cell division protein FtsB AM474_RS07530 c81cbaed0ca34733f9baac241f94407b 94 Gene3D G3DSA:1.20.5.340 28 78 3.2E-5 T 29-03-2018 AM474_RS07530 c81cbaed0ca34733f9baac241f94407b 94 Pfam PF04977 Septum formation initiator 17 92 2.7E-23 T 29-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 Gene3D G3DSA:2.60.40.1180 343 470 9.2E-15 T 29-03-2018 AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 Gene3D G3DSA:2.60.40.1180 299 342 5.4E-6 T 29-03-2018 AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 SUPERFAMILY SSF81901 256 449 7.19E-19 T 29-03-2018 AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 Gene3D G3DSA:1.25.40.10 34 150 1.4E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 SMART SM00671 62 96 26.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 SMART SM00671 345 380 1.7E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 SMART SM00671 381 416 3.3 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 SMART SM00671 310 344 0.018 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS07040 dbfed851e4ca67d3dde47a7ae02e65f1 475 Gene3D G3DSA:1.25.40.10 203 298 1.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 SMART SM00905 4 114 1.2E-50 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 115 9.3E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 SUPERFAMILY SSF55620 2 115 1.72E-35 T 29-03-2018 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 5.1E-32 T 29-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 5.9E-25 T 29-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM474_RS11715 82d630343f0451bffb467118d42bb260 117 Gene3D G3DSA:3.30.1130.10 1 117 7.2E-36 T 29-03-2018 AM474_RS02475 ca9663213715fffa8c44f6c16367fa63 216 SUPERFAMILY SSF52113 127 206 1.8E-5 T 29-03-2018 IPR001357 BRCT domain AM474_RS02475 ca9663213715fffa8c44f6c16367fa63 216 Gene3D G3DSA:1.10.3680.10 17 70 0.021 T 29-03-2018 IPR029024 TerB-like AM474_RS02475 ca9663213715fffa8c44f6c16367fa63 216 Gene3D G3DSA:3.40.50.10190 132 213 1.6E-6 T 29-03-2018 IPR001357 BRCT domain AM474_RS30885 c0169717934dfd4fe13827787f9ddc49 328 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 48 301 1.1E-78 T 29-03-2018 IPR007817 Pyoverdine biosynthesis AM474_RS30885 c0169717934dfd4fe13827787f9ddc49 328 PIRSF PIRSF037196 2 325 1.8E-167 T 29-03-2018 IPR017133 Pyoverdine chromophore biosynthesis protein PvcA AM474_RS08495 5df2507eb9ff49528148dc98d23df193 720 Gene3D G3DSA:3.30.565.10 2 398 2.4E-22 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS08495 5df2507eb9ff49528148dc98d23df193 720 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 144 5.7E-22 T 29-03-2018 AM474_RS08495 5df2507eb9ff49528148dc98d23df193 720 SUPERFAMILY SSF55874 8 131 5.24E-17 T 29-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain AM474_RS15510 a663a6a613a846b2e98b4d632a7a175b 460 Pfam PF00534 Glycosyl transferases group 1 268 415 1.3E-21 T 29-03-2018 IPR001296 Glycosyl transferase, family 1 AM474_RS15510 a663a6a613a846b2e98b4d632a7a175b 460 Gene3D G3DSA:3.40.50.2000 258 420 1.6E-25 T 29-03-2018 AM474_RS15510 a663a6a613a846b2e98b4d632a7a175b 460 SUPERFAMILY SSF53756 14 411 2.04E-40 T 29-03-2018 AM474_RS30155 b750cedf9c79e83111f74935755be9d7 684 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 116 672 5.1E-85 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM474_RS30155 b750cedf9c79e83111f74935755be9d7 684 Pfam PF02446 4-alpha-glucanotransferase 156 652 9.0E-103 T 29-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AM474_RS30155 b750cedf9c79e83111f74935755be9d7 684 SUPERFAMILY SSF51445 143 671 3.0E-130 T 29-03-2018 IPR017853 Glycoside hydrolase superfamily AM474_RS30155 b750cedf9c79e83111f74935755be9d7 684 Gene3D G3DSA:3.20.20.80 145 676 4.1E-149 T 29-03-2018 AM474_RS22605 d13c22ce609be68f564b3e58d005ba93 271 Pfam PF01925 Sulfite exporter TauE/SafE 6 268 3.6E-37 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS22975 ed47151e58482d41fcbc1083031df74e 260 Pfam PF14518 Iron-containing redox enzyme 56 232 1.1E-14 T 29-03-2018 IPR028201 PqqC-like protein AM474_RS22975 ed47151e58482d41fcbc1083031df74e 260 Gene3D G3DSA:1.20.910.10 1 258 3.1E-34 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS22975 ed47151e58482d41fcbc1083031df74e 260 SUPERFAMILY SSF48613 19 243 5.44E-44 T 29-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AM474_RS04400 c8e852847557abada7b2f0faedf68e7d 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 167 262 2.7E-12 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS04400 c8e852847557abada7b2f0faedf68e7d 310 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 37 123 3.4E-10 T 29-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM474_RS04400 c8e852847557abada7b2f0faedf68e7d 310 SUPERFAMILY SSF50475 168 264 1.09E-6 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS04400 c8e852847557abada7b2f0faedf68e7d 310 Gene3D G3DSA:2.30.110.10 162 302 1.8E-13 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS04400 c8e852847557abada7b2f0faedf68e7d 310 Gene3D G3DSA:2.30.110.10 29 152 3.7E-9 T 29-03-2018 IPR012349 FMN-binding split barrel GO:0048037 AM474_RS31115 d9c9a98c18095af4415b55269139a09e 180 Gene3D G3DSA:3.90.960.10 18 179 9.4E-25 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS31115 d9c9a98c18095af4415b55269139a09e 180 Pfam PF04073 Aminoacyl-tRNA editing domain 48 166 6.1E-21 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS31115 d9c9a98c18095af4415b55269139a09e 180 SUPERFAMILY SSF55826 35 176 1.44E-27 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00850 148 246 8.0E-25 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF04397 LytTr DNA-binding domain 149 245 3.4E-21 T 29-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-27 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 SUPERFAMILY SSF52172 1 122 9.11E-34 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 SMART SM00448 1 113 6.8E-32 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:2.40.50.40 138 206 1.0E-10 T 29-03-2018 AM474_RS16515 74b6847b6ad76a43e62e20cf63810008 248 Gene3D G3DSA:3.40.50.2300 1 131 1.7E-33 T 29-03-2018 AM474_RS17255 f89401f9d2c656831bdabb8bec1de0cd 173 Pfam PF13511 Domain of unknown function (DUF4124) 7 57 8.4E-15 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS20620 9b8f227170d408d3cbed92e325922db6 81 Gene3D G3DSA:2.30.170.10 40 80 7.0E-7 T 29-03-2018 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 2.7E-109 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 2.1E-201 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS31005 561d6a91c2a3370927871545bc0ef3e4 427 Pfam PF02040 Arsenical pump membrane protein 4 422 7.0E-150 T 29-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 AM474_RS20460 4a2ef102f63dae56db517cd1a2b08b3d 108 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 78 102 - T 29-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AM474_RS20460 4a2ef102f63dae56db517cd1a2b08b3d 108 SUPERFAMILY SSF57716 75 106 1.24E-7 T 29-03-2018 AM474_RS20460 4a2ef102f63dae56db517cd1a2b08b3d 108 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 73 103 1.9E-9 T 29-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM474_RS19235 da708d1b17b4026acef517467713b73b 192 Gene3D G3DSA:3.40.50.300 27 192 1.5E-13 T 29-03-2018 AM474_RS19235 da708d1b17b4026acef517467713b73b 192 Pfam PF13671 AAA domain 14 57 3.5E-6 T 29-03-2018 AM474_RS19235 da708d1b17b4026acef517467713b73b 192 Gene3D G3DSA:3.40.50.300 4 26 1.9E-4 T 29-03-2018 AM474_RS19235 da708d1b17b4026acef517467713b73b 192 SUPERFAMILY SSF52540 11 114 1.16E-14 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS30550 5fb3144029739ff1d61bae39c5a6ab29 288 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 27 224 6.3E-39 T 29-03-2018 IPR008775 Phytanoyl-CoA dioxygenase AM474_RS30550 5fb3144029739ff1d61bae39c5a6ab29 288 Gene3D G3DSA:2.60.120.620 15 239 2.0E-28 T 29-03-2018 AM474_RS30550 5fb3144029739ff1d61bae39c5a6ab29 288 SUPERFAMILY SSF51197 28 268 1.56E-42 T 29-03-2018 AM474_RS12125 88acb75011eb20b6b5c1992deb7304fa 147 Gene3D G3DSA:1.10.10.10 1 53 1.0E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12125 88acb75011eb20b6b5c1992deb7304fa 147 Gene3D G3DSA:3.30.70.920 54 139 6.6E-9 T 29-03-2018 AM474_RS20280 f1dbc11260e62f354871987fd962ff57 84 Pfam PF04325 Protein of unknown function (DUF465) 29 75 2.8E-12 T 29-03-2018 IPR007420 Protein of unknown function DUF465 AM474_RS23960 f36ab7ac3ca983fb7524eae1e5ada649 253 Gene3D G3DSA:1.10.12.10 215 253 5.8E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS23960 f36ab7ac3ca983fb7524eae1e5ada649 253 SUPERFAMILY SSF52096 4 252 2.75E-68 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS23960 f36ab7ac3ca983fb7524eae1e5ada649 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 252 1.4E-50 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS23960 f36ab7ac3ca983fb7524eae1e5ada649 253 Gene3D G3DSA:3.90.226.10 4 214 6.5E-55 T 29-03-2018 AM474_RS02005 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 3 65 4.1E-17 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AM474_RS02005 d9d4bdb12db35ccadaa129c6f4b6b975 147 Pfam PF05232 Chlorhexidine efflux transporter 71 133 5.3E-23 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AM474_RS22715 89bc3ddf3d320053b7818339f148fa83 431 Pfam PF05853 beta-keto acid cleavage enzyme 44 136 2.6E-6 T 29-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 AM474_RS22715 89bc3ddf3d320053b7818339f148fa83 431 Gene3D G3DSA:3.20.20.70 2 404 8.7E-23 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS24775 b8281ba8a6f88ba146bfef2eeedd1508 223 Pfam PF08787 Alginate lyase 3 222 2.4E-52 T 29-03-2018 IPR014895 Alginate lyase 2 AM474_RS24775 b8281ba8a6f88ba146bfef2eeedd1508 223 Gene3D G3DSA:2.60.120.200 2 223 6.4E-67 T 29-03-2018 AM474_RS24775 b8281ba8a6f88ba146bfef2eeedd1508 223 SUPERFAMILY SSF49899 3 222 7.75E-76 T 29-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain AM474_RS26625 a2c264ab19ac2d8d38dfc1d8c02c0325 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.3E-33 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS26625 a2c264ab19ac2d8d38dfc1d8c02c0325 260 PIRSF PIRSF006241 1 260 2.1E-95 T 29-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 AM474_RS26625 a2c264ab19ac2d8d38dfc1d8c02c0325 260 Gene3D G3DSA:3.20.20.150 1 259 3.9E-59 T 29-03-2018 AM474_RS26625 a2c264ab19ac2d8d38dfc1d8c02c0325 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 2.5E-128 T 29-03-2018 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 AM474_RS26625 a2c264ab19ac2d8d38dfc1d8c02c0325 260 SUPERFAMILY SSF51658 1 256 1.52E-87 T 29-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain AM474_RS21365 e257e692b35143fa508462b203234c2d 153 Pfam PF05258 Protein of unknown function (DUF721) 15 96 1.5E-9 T 29-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AM474_RS22585 5a4c51b231b42c9c93a7294e189fea50 1041 Gene3D G3DSA:3.40.710.10 409 1030 4.1E-63 T 29-03-2018 AM474_RS22585 5a4c51b231b42c9c93a7294e189fea50 1041 SUPERFAMILY SSF53955 171 389 3.09E-9 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS22585 5a4c51b231b42c9c93a7294e189fea50 1041 Gene3D G3DSA:1.10.3810.10 155 391 2.1E-28 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS22585 5a4c51b231b42c9c93a7294e189fea50 1041 Pfam PF00912 Transglycosylase 162 358 3.5E-25 T 29-03-2018 IPR001264 Glycosyl transferase, family 51 AM474_RS22585 5a4c51b231b42c9c93a7294e189fea50 1041 SUPERFAMILY SSF56601 749 1023 1.52E-26 T 29-03-2018 IPR012338 Beta-lactamase/transpeptidase-like AM474_RS15990 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF01551 Peptidase family M23 177 271 2.6E-24 T 29-03-2018 IPR016047 Peptidase M23 AM474_RS15990 77ef3dabcf9509a9d627e8c33e4c0748 299 Pfam PF13511 Domain of unknown function (DUF4124) 11 44 2.1E-10 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS15990 77ef3dabcf9509a9d627e8c33e4c0748 299 Gene3D G3DSA:2.70.70.10 56 294 6.0E-30 T 29-03-2018 AM474_RS15990 77ef3dabcf9509a9d627e8c33e4c0748 299 SUPERFAMILY SSF51261 159 271 5.75E-30 T 29-03-2018 IPR011055 Duplicated hybrid motif AM474_RS15550 ef1f82fab72dc360263c111c55170911 732 Gene3D G3DSA:1.25.40.10 440 689 7.4E-4 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS19270 e0acfaf0aedfab810b77248761202a10 206 Pfam PF13590 Domain of unknown function (DUF4136) 56 205 2.8E-18 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 AM474_RS30315 328fd05b19eee8eb6cd2ef118e9601c3 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 4.2E-20 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS30315 328fd05b19eee8eb6cd2ef118e9601c3 114 SUPERFAMILY SSF54909 1 95 1.93E-29 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS30315 328fd05b19eee8eb6cd2ef118e9601c3 114 Gene3D G3DSA:3.30.70.100 1 101 8.3E-24 T 29-03-2018 AM474_RS29535 507fcefa064024d84d54ff0e0ccec3f6 624 Pfam PF01841 Transglutaminase-like superfamily 265 331 2.0E-6 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS29535 507fcefa064024d84d54ff0e0ccec3f6 624 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 46 205 2.4E-26 T 29-03-2018 IPR024618 Domain of unknown function DUF3857 AM474_RS29535 507fcefa064024d84d54ff0e0ccec3f6 624 SUPERFAMILY SSF54001 266 418 1.03E-11 T 29-03-2018 AM474_RS00210 359260f3095460081f308148b7bd4ace 196 SUPERFAMILY SSF52218 1 193 1.19E-39 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS00210 359260f3095460081f308148b7bd4ace 196 Gene3D G3DSA:3.40.50.360 1 195 2.6E-32 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS00210 359260f3095460081f308148b7bd4ace 196 Pfam PF02525 Flavodoxin-like fold 2 188 4.4E-35 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS11545 5380e72ff0f86d2b40a1122c93d57b9d 185 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 116 2.2E-44 T 29-03-2018 IPR006531 Gp5 N-terminal AM474_RS11545 5380e72ff0f86d2b40a1122c93d57b9d 185 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 185 2.3E-56 T 29-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 AM474_RS18350 6a61747724f0c06f089b485e2b272c68 174 Gene3D G3DSA:2.40.70.10 52 160 3.3E-18 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS18350 6a61747724f0c06f089b485e2b272c68 174 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 55 170 2.4E-32 T 29-03-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AM474_RS18350 6a61747724f0c06f089b485e2b272c68 174 SUPERFAMILY SSF50630 58 160 3.03E-20 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS18350 6a61747724f0c06f089b485e2b272c68 174 Pfam PF13975 gag-polyprotein putative aspartyl protease 68 156 7.0E-24 T 29-03-2018 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 39.575 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 227 2.1E-56 T 29-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 SMART SM00934 7 227 1.3E-99 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 29-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 226 1.4E-50 T 29-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 Gene3D G3DSA:3.20.20.70 2 232 7.0E-69 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS03565 32c0ed00d7eccedb69c54a3ddd3597bd 232 SUPERFAMILY SSF51366 5 230 2.07E-73 T 29-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AM474_RS04425 647f0be76057b411ed207e60bbe866f0 126 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 14 123 2.1E-19 T 29-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III AM474_RS24060 32156e8acd5679301836b221c1fc1476 165 Gene3D G3DSA:3.40.50.150 13 161 7.5E-5 T 29-03-2018 AM474_RS10950 a532b5709d087878f1269752238d5a7c 501 Pfam PF03929 PepSY-associated TM region 9 360 5.7E-38 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS21050 33c76a0c6c3cbbf2d08fafa717e41c3e 310 Pfam PF02535 ZIP Zinc transporter 165 305 3.2E-16 T 29-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM474_RS30545 aeaaf4c45ccb6785ae0d95321b63a922 320 SUPERFAMILY SSF110296 34 288 2.12E-49 T 29-03-2018 AM474_RS30545 aeaaf4c45ccb6785ae0d95321b63a922 320 Gene3D G3DSA:2.130.10.10 17 158 7.1E-16 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS30545 aeaaf4c45ccb6785ae0d95321b63a922 320 Gene3D G3DSA:2.120.10.10 159 314 7.1E-15 T 29-03-2018 AM474_RS30545 aeaaf4c45ccb6785ae0d95321b63a922 320 Pfam PF14870 Photosynthesis system II assembly factor YCF48 77 205 2.3E-16 T 29-03-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AM474_RS17950 088e8ee9c8a606b15ed5bedbb7301775 119 Gene3D G3DSA:1.10.10.60 60 114 7.7E-9 T 29-03-2018 AM474_RS17950 088e8ee9c8a606b15ed5bedbb7301775 119 Pfam PF08765 Mor transcription activator family 11 110 1.3E-15 T 29-03-2018 IPR014875 Mor transcription activator AM474_RS17950 088e8ee9c8a606b15ed5bedbb7301775 119 SUPERFAMILY SSF46689 14 106 1.52E-12 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS24815 11bc2c1ac1f3055e977e590ad83e308e 109 Pfam PF03927 NapD protein 6 78 1.5E-25 T 29-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly AM474_RS14635 211276930b850147d7bd884d5cb19efe 856 Pfam PF04830 Possible hemagglutinin (DUF637) 290 457 7.9E-48 T 29-03-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative AM474_RS19040 c9fc55ea0817264ae5802f2e15ddc23f 433 SUPERFAMILY SSF51735 10 129 7.88E-5 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS19040 c9fc55ea0817264ae5802f2e15ddc23f 433 Pfam PF10100 Staphylopine dehydrogenase 10 429 3.2E-170 T 29-03-2018 IPR016935 Staphylopine dehydrogenase AM474_RS19040 c9fc55ea0817264ae5802f2e15ddc23f 433 Gene3D G3DSA:3.40.50.720 1 281 1.0E-7 T 29-03-2018 AM474_RS19040 c9fc55ea0817264ae5802f2e15ddc23f 433 PIRSF PIRSF029692 5 433 9.6E-193 T 29-03-2018 IPR016935 Staphylopine dehydrogenase AM474_RS31750 6758ecc8957e4e35ce7f484865eaf2ce 724 Pfam PF04632 Fusaric acid resistance protein family 19 699 5.0E-152 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS21660 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 Gene3D G3DSA:2.40.110.10 73 169 4.9E-8 T 29-03-2018 AM474_RS21660 3c6024e92bd36c7e4d4525ac5c6f6c5e 298 SUPERFAMILY SSF56645 50 165 1.57E-11 T 29-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AM474_RS31875 b9e3879fb6c24a1ef14cf40c9d3f0741 178 Pfam PF00583 Acetyltransferase (GNAT) family 47 150 1.2E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS31875 b9e3879fb6c24a1ef14cf40c9d3f0741 178 SUPERFAMILY SSF55729 6 162 4.73E-17 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS31875 b9e3879fb6c24a1ef14cf40c9d3f0741 178 Gene3D G3DSA:3.40.630.30 3 177 9.4E-19 T 29-03-2018 AM474_RS30060 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 1.2E-9 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM474_RS30060 14a172047736140b84ada895cf2cfa37 55 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 4.8E-9 T 29-03-2018 IPR019626 Stress-induced protein, KGG, repeat AM474_RS15335 dc345c349d02eaa2f601eac17913cd50 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 21.504 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM474_RS15335 dc345c349d02eaa2f601eac17913cd50 53 PIRSF PIRSF036466 1 53 5.3E-24 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM474_RS15335 dc345c349d02eaa2f601eac17913cd50 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 9.0E-17 T 29-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 AM474_RS19025 7518a4d5004c8cdbe88160f003c13b20 384 Pfam PF07786 Protein of unknown function (DUF1624) 10 218 4.8E-16 T 29-03-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-6798695 AM474_RS27985 19a40fbeeea46ea19a248a008b09e865 125 Gene3D G3DSA:3.40.30.10 9 115 1.9E-9 T 29-03-2018 AM474_RS27985 19a40fbeeea46ea19a248a008b09e865 125 SUPERFAMILY SSF52833 4 115 8.4E-16 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS15795 6ab01b69bbe57852e6852e9f863dd24b 325 Gene3D G3DSA:3.20.20.140 2 325 2.2E-84 T 29-03-2018 AM474_RS15795 6ab01b69bbe57852e6852e9f863dd24b 325 SUPERFAMILY SSF51556 9 324 1.36E-82 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS15795 6ab01b69bbe57852e6852e9f863dd24b 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 6 320 3.0E-93 T 29-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AM474_RS22345 5e7f9927c6b6c769b81fe4653381bc06 213 Pfam PF13460 NAD(P)H-binding 7 198 4.2E-35 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS22345 5e7f9927c6b6c769b81fe4653381bc06 213 Gene3D G3DSA:3.40.50.720 1 213 3.0E-33 T 29-03-2018 AM474_RS22345 5e7f9927c6b6c769b81fe4653381bc06 213 SUPERFAMILY SSF51735 1 211 3.85E-40 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS29845 9b0117e99697c3e2c2c8164da9edd5c7 158 Pfam PF13628 Domain of unknown function (DUF4142) 24 152 1.6E-21 T 29-03-2018 IPR025419 Domain of unknown function DUF4142 AM474_RS29845 9b0117e99697c3e2c2c8164da9edd5c7 158 Gene3D G3DSA:1.20.1260.10 17 154 3.4E-11 T 29-03-2018 IPR012347 Ferritin-related AM474_RS17560 9a074bb9ba9a8da69edd38438975a1d2 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 4.9E-35 T 29-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein AM474_RS17560 9a074bb9ba9a8da69edd38438975a1d2 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 2.0E-36 T 29-03-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein AM474_RS27160 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Pfam PF01738 Dienelactone hydrolase family 29 239 2.5E-41 T 29-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 AM474_RS27160 ac5e0b5d6cbaf8f24c298a159b88ba04 241 Gene3D G3DSA:3.40.50.1820 1 238 2.6E-25 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS27160 ac5e0b5d6cbaf8f24c298a159b88ba04 241 SUPERFAMILY SSF53474 6 238 4.9E-37 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS10310 3662bb9cbf7f945568595a4964feb3bb 274 Gene3D G3DSA:2.40.128.20 30 122 3.3E-19 T 29-03-2018 IPR012674 Calycin AM474_RS10310 3662bb9cbf7f945568595a4964feb3bb 274 Gene3D G3DSA:2.40.128.20 161 255 7.2E-20 T 29-03-2018 IPR012674 Calycin AM474_RS10310 3662bb9cbf7f945568595a4964feb3bb 274 Pfam PF17409 MoaF C-terminal domain 158 270 7.6E-50 T 29-03-2018 IPR035348 MoaF, C-terminal domain AM474_RS10310 3662bb9cbf7f945568595a4964feb3bb 274 Pfam PF10703 MoaF N-terminal domain 8 116 2.7E-34 T 29-03-2018 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal AM474_RS23000 f1d8a9eea06bc62e6183c693e27ecff5 472 Pfam PF00324 Amino acid permease 19 453 2.1E-114 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS23000 f1d8a9eea06bc62e6183c693e27ecff5 472 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS23000 f1d8a9eea06bc62e6183c693e27ecff5 472 PIRSF PIRSF006060 1 469 2.4E-75 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS07705 15a604fe3c932a349b1ae3752d04c73e 326 Pfam PF14238 Domain of unknown function (DUF4340) 72 246 2.6E-19 T 29-03-2018 IPR025641 Domain of unknown function DUF4340 AM474_RS12865 e4957c3f67bf6cd4a459c6582d5fd996 188 Gene3D G3DSA:3.40.1580.10 6 144 3.8E-4 T 29-03-2018 AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 Gene3D G3DSA:1.20.91.10 239 321 1.8E-7 T 29-03-2018 AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 SUPERFAMILY SSF51735 422 549 1.79E-26 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 1.9E-73 T 29-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 Pfam PF02254 TrkA-N domain 424 537 4.5E-23 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 Gene3D G3DSA:3.40.50.720 416 537 1.5E-18 T 29-03-2018 AM474_RS15155 8bd70b3d772c53dbf6e9f47cf6951d4a 567 Pfam PF00999 Sodium/hydrogen exchanger family 12 384 4.7E-76 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS13760 d5f7655ec3c83af5fcc134e36f8cafe1 70 Pfam PF11278 Protein of unknown function (DUF3079) 1 49 8.2E-34 T 29-03-2018 IPR021430 Protein of unknown function DUF3079 AM474_RS12660 d96f290186cd04b6121a312428ab3a72 121 SMART SM00448 2 115 3.4E-39 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS12660 d96f290186cd04b6121a312428ab3a72 121 Gene3D G3DSA:3.40.50.2300 1 121 1.7E-38 T 29-03-2018 AM474_RS12660 d96f290186cd04b6121a312428ab3a72 121 SUPERFAMILY SSF52172 1 120 9.53E-39 T 29-03-2018 IPR011006 CheY-like superfamily AM474_RS12660 d96f290186cd04b6121a312428ab3a72 121 Pfam PF00072 Response regulator receiver domain 4 116 3.8E-28 T 29-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM474_RS23005 11ea892646418828f5751d37ba9fc154 127 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 49 115 2.2E-21 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM474_RS23005 11ea892646418828f5751d37ba9fc154 127 SUPERFAMILY SSF141488 43 117 1.83E-20 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM474_RS23005 11ea892646418828f5751d37ba9fc154 127 Gene3D G3DSA:3.40.190.10 1 120 0.0011 T 29-03-2018 AM474_RS06605 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 2.1E-18 T 29-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AM474_RS06605 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Pfam PF03459 TOBE domain 8 67 3.8E-16 T 29-03-2018 IPR005116 Transport-associated OB, type 1 AM474_RS06605 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 SUPERFAMILY SSF50331 6 69 3.16E-16 T 29-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM474_RS06605 b75f4ed8d1c66e2cc5586b1f0bdd8166 71 Gene3D G3DSA:2.40.50.100 5 70 7.7E-17 T 29-03-2018 AM474_RS02265 3ab96bccd9785c12c7c7634640563524 209 Gene3D G3DSA:3.30.20.10 95 154 3.1E-19 T 29-03-2018 AM474_RS02265 3ab96bccd9785c12c7c7634640563524 209 Pfam PF00182 Chitinase class I 116 169 6.2E-6 T 29-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 AM474_RS02265 3ab96bccd9785c12c7c7634640563524 209 SUPERFAMILY SSF53955 104 208 5.34E-49 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS02265 3ab96bccd9785c12c7c7634640563524 209 SUPERFAMILY SSF53955 2 76 5.34E-49 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS22400 fc5fdfa2db6b53d2cea01ce2986d1822 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 2.2E-137 T 29-03-2018 IPR002823 Protein of unknown function DUF112, transmembrane AM474_RS00240 414fa51b71c8f43e40f396265d3fdd6d 124 Gene3D G3DSA:3.10.180.10 1 123 2.3E-16 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00240 414fa51b71c8f43e40f396265d3fdd6d 124 SUPERFAMILY SSF54593 2 121 5.5E-19 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS23045 6c0b3d15759ffb390b49e3a16df8e946 88 Pfam PF10976 Protein of unknown function (DUF2790) 8 86 2.9E-34 T 29-03-2018 IPR021245 Protein of unknown function DUF2790 AM474_RS18965 dce497651c59889649b8ef49ec913dab 289 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 22 259 5.0E-15 T 29-03-2018 AM474_RS24335 a0b1d3242fd7f13ddd9fe592e3427754 210 Gene3D G3DSA:3.40.50.20 1 81 4.1E-10 T 29-03-2018 AM474_RS24335 a0b1d3242fd7f13ddd9fe592e3427754 210 Gene3D G3DSA:2.160.10.10 82 206 8.5E-28 T 29-03-2018 AM474_RS24335 a0b1d3242fd7f13ddd9fe592e3427754 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 157 190 1.3E-6 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS24335 a0b1d3242fd7f13ddd9fe592e3427754 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 154 1.0E-5 T 29-03-2018 IPR001451 Hexapeptide repeat AM474_RS24335 a0b1d3242fd7f13ddd9fe592e3427754 210 SUPERFAMILY SSF51161 49 207 6.38E-33 T 29-03-2018 IPR011004 Trimeric LpxA-like AM474_RS03845 a049c5cbb07becd695230578af9845a9 196 Gene3D G3DSA:1.10.10.60 1 61 2.1E-16 T 29-03-2018 AM474_RS03845 a049c5cbb07becd695230578af9845a9 196 SUPERFAMILY SSF46689 2 85 1.9E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS03845 a049c5cbb07becd695230578af9845a9 196 Gene3D G3DSA:1.10.357.10 62 194 5.4E-24 T 29-03-2018 AM474_RS03845 a049c5cbb07becd695230578af9845a9 196 SUPERFAMILY SSF48498 81 196 6.81E-29 T 29-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AM474_RS03845 a049c5cbb07becd695230578af9845a9 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 8.8E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 SUPERFAMILY SSF54506 1 259 1.43E-86 T 29-03-2018 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 Gene3D G3DSA:3.10.310.10 1 120 2.4E-35 T 29-03-2018 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 Gene3D G3DSA:3.10.310.10 121 247 1.2E-37 T 29-03-2018 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 PIRSF PIRSF016184 1 259 1.7E-60 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 257 5.9E-43 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS02080 b4b9537a946f50026a895bd25f6242ed 259 Pfam PF02567 Phenazine biosynthesis-like protein 8 255 6.3E-63 T 29-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AM474_RS15600 3a96b6eb0e405e8f4f62f34ff1dcef36 224 Pfam PF13302 Acetyltransferase (GNAT) domain 47 165 1.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS15600 3a96b6eb0e405e8f4f62f34ff1dcef36 224 SUPERFAMILY SSF55729 15 189 9.25E-36 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS15600 3a96b6eb0e405e8f4f62f34ff1dcef36 224 Gene3D G3DSA:3.40.630.30 5 197 2.2E-28 T 29-03-2018 AM474_RS02995 10e2c3aa91443f6587de4ae88c10dd33 213 Gene3D G3DSA:1.20.1170.10 16 185 3.2E-6 T 29-03-2018 AM474_RS02445 fd7e50b20aeb97695263cfdc24839e7b 147 SUPERFAMILY SSF103084 9 140 1.7E-19 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM474_RS02445 fd7e50b20aeb97695263cfdc24839e7b 147 Gene3D G3DSA:3.30.1330.70 4 145 7.1E-27 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM474_RS02445 fd7e50b20aeb97695263cfdc24839e7b 147 Pfam PF05866 Endodeoxyribonuclease RusA 12 139 1.3E-31 T 29-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 Gene3D G3DSA:3.40.605.10 8 280 2.0E-95 T 29-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 29-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 29-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 2.9E-163 T 29-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 SUPERFAMILY SSF53720 13 497 1.11E-161 T 29-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AM474_RS09980 6ecd21a69f1159823aaa4ca07c064487 506 Gene3D G3DSA:3.40.309.10 281 474 1.4E-61 T 29-03-2018 AM474_RS19930 945d449174059e13bb5124011652699c 101 Pfam PF01381 Helix-turn-helix 20 69 2.1E-6 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS19930 945d449174059e13bb5124011652699c 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 8.9E-33 T 29-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 AM474_RS19930 945d449174059e13bb5124011652699c 101 Gene3D G3DSA:1.10.260.40 1 97 8.0E-12 T 29-03-2018 AM474_RS19930 945d449174059e13bb5124011652699c 101 SMART SM00530 14 70 1.2E-5 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS19930 945d449174059e13bb5124011652699c 101 SUPERFAMILY SSF47413 10 92 4.22E-23 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS31570 c95166107373461259d5931a4797911b 284 Gene3D G3DSA:3.90.1580.10 22 284 5.4E-62 T 29-03-2018 AM474_RS31570 c95166107373461259d5931a4797911b 284 Pfam PF03781 Sulfatase-modifying factor enzyme 1 37 282 2.4E-68 T 29-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AM474_RS31570 c95166107373461259d5931a4797911b 284 SUPERFAMILY SSF56436 36 283 2.83E-65 T 29-03-2018 IPR016187 C-type lectin fold AM474_RS11440 2fd2c568f6433c0e0f112a02b43961c4 113 Pfam PF05939 Phage minor tail protein 5 111 7.8E-32 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AM474_RS12685 a82536b134f190752217618ec5c8626b 144 SMART SM00732 8 108 8.0E-40 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM474_RS12685 a82536b134f190752217618ec5c8626b 144 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 8 143 24.793 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM474_RS12685 a82536b134f190752217618ec5c8626b 144 Pfam PF03652 Holliday junction resolvase 10 140 1.4E-39 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM474_RS12685 a82536b134f190752217618ec5c8626b 144 SUPERFAMILY SSF53098 9 141 1.82E-40 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS12685 a82536b134f190752217618ec5c8626b 144 Gene3D G3DSA:3.30.420.140 7 144 1.7E-40 T 29-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM474_RS12685 a82536b134f190752217618ec5c8626b 144 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 11 139 2.6E-40 T 29-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM474_RS24490 5915e425587a717be3ea55a1ac987b21 111 PIRSF PIRSF037256 1 111 2.1E-55 T 29-03-2018 IPR017160 Uncharacterised conserved protein UCP037256 AM474_RS22755 4556530d5f5a96b6c79cc8e95559b8f8 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 105 1.4E-18 T 29-03-2018 IPR009241 Toxin HigB-like AM474_RS20285 1c8349439b15ae4c65ab37f79578cdc5 144 Pfam PF05425 Copper resistance protein D 44 134 3.7E-11 T 29-03-2018 IPR008457 Copper resistance protein D GO:0016021 AM474_RS14100 f9f9a41bbaf99ba39079742df660c095 365 Gene3D G3DSA:1.10.3470.10 9 341 3.6E-33 T 29-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like AM474_RS14100 f9f9a41bbaf99ba39079742df660c095 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 338 3.2E-47 T 29-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AM474_RS08100 3b2e3244b27a94faf6b6e3fd2f7d0ec5 266 Pfam PF01578 Cytochrome C assembly protein 38 263 2.6E-41 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM474_RS03225 d5c4e557971d2b9569d35721843a1aef 143 Pfam PF04343 Protein of unknown function, DUF488 13 131 1.3E-22 T 29-03-2018 IPR007438 Protein of unknown function DUF488 AM474_RS12445 24ddaecac2f8c3ac3338cf7d21934560 540 Pfam PF01384 Phosphate transporter family 84 529 1.2E-86 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 Pfam PF02321 Outer membrane efflux protein 283 468 3.5E-23 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 Pfam PF02321 Outer membrane efflux protein 65 257 1.5E-19 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 SUPERFAMILY SSF56954 56 470 3.27E-95 T 29-03-2018 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 SUPERFAMILY SSF56954 6 32 3.27E-95 T 29-03-2018 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 470 1.4E-112 T 29-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 AM474_RS09200 3d0adb7baf5bd0f18a5d38d80e4fc199 496 Gene3D G3DSA:1.20.1600.10 18 474 1.4E-85 T 29-03-2018 AM474_RS06575 92453fe0232fdf6b96d7fc766f493368 185 SUPERFAMILY SSF54909 3 103 8.94E-19 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS06575 92453fe0232fdf6b96d7fc766f493368 185 Gene3D G3DSA:3.30.70.100 4 103 1.5E-14 T 29-03-2018 AM474_RS04480 6fbc8010076f8519fd1a3027ee6ed0c4 93 Pfam PF11197 Protein of unknown function (DUF2835) 25 91 1.4E-25 T 29-03-2018 IPR021363 Protein of unknown function DUF2835 AM474_RS22695 0fde941044abccac6426b129f76cb7d5 157 Gene3D G3DSA:3.30.530.20 10 148 2.3E-20 T 29-03-2018 IPR023393 START-like domain AM474_RS22695 0fde941044abccac6426b129f76cb7d5 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 139 1.7E-15 T 29-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 AM474_RS22695 0fde941044abccac6426b129f76cb7d5 157 SUPERFAMILY SSF55961 10 139 3.47E-22 T 29-03-2018 AM474_RS14565 cabf0e00fab0d23b4fa0025efdc2f729 221 Gene3D G3DSA:3.40.50.10070 32 166 3.7E-12 T 29-03-2018 AM474_RS14565 cabf0e00fab0d23b4fa0025efdc2f729 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 15 214 7.5E-95 T 29-03-2018 IPR008517 Protein of unknown function DUF799 AM474_RS31745 1ccd78cca2e785ae37ede1f7facca887 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 4.2E-16 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 PRINTS PR00412 Epoxide hydrolase signature 266 288 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 PRINTS PR00412 Epoxide hydrolase signature 42 60 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 PRINTS PR00412 Epoxide hydrolase signature 107 120 1.4E-6 T 29-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 SUPERFAMILY SSF53474 13 288 5.79E-57 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 Pfam PF12697 Alpha/beta hydrolase family 38 283 1.3E-15 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS06545 d5fa9d4ef1787e6a47456c755a79ecf1 298 Gene3D G3DSA:3.40.50.1820 11 295 6.6E-39 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25000 0de0460f16c07376e88de9af2c2f51e4 185 SUPERFAMILY SSF52218 6 176 1.04E-52 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS25000 0de0460f16c07376e88de9af2c2f51e4 185 Pfam PF03358 NADPH-dependent FMN reductase 6 150 2.8E-39 T 29-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AM474_RS25000 0de0460f16c07376e88de9af2c2f51e4 185 Gene3D G3DSA:3.40.50.360 1 185 8.5E-47 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS05330 34fcf131b7a7fbb12715bbf792b3b28c 105 Pfam PF06127 Protein of unknown function (DUF962) 9 102 1.5E-38 T 29-03-2018 IPR009305 Protein of unknown function DUF962 AM474_RS06355 65a10c61680cfabb33666718e97219fa 178 SUPERFAMILY SSF160387 66 172 3.66E-32 T 29-03-2018 AM474_RS06355 65a10c61680cfabb33666718e97219fa 178 Pfam PF05573 NosL 19 163 3.3E-51 T 29-03-2018 IPR008719 Nitrous oxide reductase accessory protein NosL AM474_RS20140 fc722838f4533248afced06ee678610b 87 Pfam PF09413 Putative prokaryotic signal transducing protein 1 63 1.7E-12 T 29-03-2018 IPR018551 Domain of unknown function DUF2007 AM474_RS20140 fc722838f4533248afced06ee678610b 87 SUPERFAMILY SSF54913 1 68 2.89E-5 T 29-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM474_RS20140 fc722838f4533248afced06ee678610b 87 Gene3D G3DSA:3.30.70.790 1 73 5.1E-19 T 29-03-2018 AM474_RS02955 742af132a8094492082934063e4be047 369 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 104 110 - T 29-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM474_RS02955 742af132a8094492082934063e4be047 369 SUPERFAMILY SSF53335 18 185 1.31E-22 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS02955 742af132a8094492082934063e4be047 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 7.2E-9 T 29-03-2018 AM474_RS02955 742af132a8094492082934063e4be047 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 7.2E-9 T 29-03-2018 AM474_RS02955 742af132a8094492082934063e4be047 369 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 101 113 7.2E-9 T 29-03-2018 AM474_RS02955 742af132a8094492082934063e4be047 369 Gene3D G3DSA:3.40.50.150 9 215 8.0E-19 T 29-03-2018 AM474_RS01385 df9cb733f876d8311421e36bdd38b5fe 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 113 2.8E-21 T 29-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AM474_RS01385 df9cb733f876d8311421e36bdd38b5fe 131 SUPERFAMILY SSF51316 1 130 2.3E-47 T 29-03-2018 IPR011057 Mss4-like AM474_RS01385 df9cb733f876d8311421e36bdd38b5fe 131 Gene3D G3DSA:3.90.1590.10 1 131 1.6E-40 T 29-03-2018 AM474_RS15355 dbbbbf124553b6f914ac8488d6bd1bbe 409 Pfam PF07670 Nucleoside recognition 52 157 1.1E-7 T 29-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AM474_RS15355 dbbbbf124553b6f914ac8488d6bd1bbe 409 PIRSF PIRSF036542 1 409 1.0E-206 T 29-03-2018 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 Gene3D G3DSA:3.40.50.10810 56 541 1.2E-24 T 29-03-2018 AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SUPERFAMILY SSF52540 571 736 3.12E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SUPERFAMILY SSF52540 351 412 3.12E-28 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SMART SM00487 69 413 1.8E-9 T 29-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 Pfam PF00271 Helicase conserved C-terminal domain 585 695 2.8E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SUPERFAMILY SSF52540 69 159 7.04E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SUPERFAMILY SSF52540 187 206 7.04E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 SUPERFAMILY SSF52540 345 411 7.04E-22 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS02970 ad1e56cc4a60974f550720edfeff9080 759 Gene3D G3DSA:3.40.50.300 572 732 2.2E-16 T 29-03-2018 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 3.1E-40 T 29-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 29-03-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 SUPERFAMILY SSF49472 1 117 1.57E-42 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 PRINTS PR00189 Transthyretin signature 95 117 1.1E-7 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 PRINTS PR00189 Transthyretin signature 3 23 1.1E-7 T 29-03-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.5E-35 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 29-03-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS26710 98d4708e9008f7da263f25bc1d059da5 117 Gene3D G3DSA:2.60.40.180 1 117 3.7E-38 T 29-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 AM474_RS29610 caddc5e33c31fa03a66d877e07b28216 357 Gene3D G3DSA:1.10.3720.10 7 351 1.1E-32 T 29-03-2018 AM474_RS29610 caddc5e33c31fa03a66d877e07b28216 357 SUPERFAMILY SSF161098 120 334 1.96E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS29610 caddc5e33c31fa03a66d877e07b28216 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 1.3E-33 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS01860 9a0a2783cbcdf32772ad8f0a89d3af37 344 Pfam PF03741 Integral membrane protein TerC family 73 297 3.5E-42 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS01860 9a0a2783cbcdf32772ad8f0a89d3af37 344 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 335 7.3E-104 T 29-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 AM474_RS12745 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 14 83 2.2E-19 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AM474_RS12745 5628a0e25cd02ffdbac3e72b75ce7565 197 Pfam PF02325 YGGT family 110 179 1.2E-20 T 29-03-2018 IPR003425 CCB3/YggT GO:0016020 AM474_RS02685 927c06e898245e81e94c81ef828808b2 223 Pfam PF01841 Transglutaminase-like superfamily 21 136 9.1E-16 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS02685 927c06e898245e81e94c81ef828808b2 223 SUPERFAMILY SSF54001 16 160 3.08E-21 T 29-03-2018 AM474_RS24595 4844ed0778db91486d403467849d1fec 137 Pfam PF04134 Protein of unknown function, DUF393 14 122 3.4E-21 T 29-03-2018 IPR007263 Protein of unknown function DUF393 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 Pfam PF01817 Chorismate mutase type II 31 101 3.0E-8 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 SMART SM00830 23 103 8.5E-14 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 27 134 7.7E-38 T 29-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 PIRSF PIRSF026640 1 183 2.5E-62 T 29-03-2018 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 SUPERFAMILY SSF48600 30 182 3.5E-30 T 29-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS16915 e833fbf03cb63cc6dfc484291a7c0364 185 Gene3D G3DSA:1.20.59.10 31 108 3.4E-14 T 29-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AM474_RS21970 646014a1c5a1f15aa4d3f79e0fd6ebe0 401 Pfam PF02417 Chromate transporter 228 394 1.2E-40 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AM474_RS21970 646014a1c5a1f15aa4d3f79e0fd6ebe0 401 Pfam PF02417 Chromate transporter 13 177 3.5E-34 T 29-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 AM474_RS21970 646014a1c5a1f15aa4d3f79e0fd6ebe0 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 394 1.3E-102 T 29-03-2018 IPR014047 Chromate transporter, long chain AM474_RS21970 646014a1c5a1f15aa4d3f79e0fd6ebe0 401 PIRSF PIRSF004810 2 400 2.1E-130 T 29-03-2018 IPR014047 Chromate transporter, long chain AM474_RS10070 b8aca34719850834723d7431bd9d098e 335 Pfam PF14238 Domain of unknown function (DUF4340) 70 249 1.8E-13 T 29-03-2018 IPR025641 Domain of unknown function DUF4340 AM474_RS19115 5c8de3ed310dea6365a5434e01d40755 453 Pfam PF01554 MatE 248 406 6.1E-14 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS19115 5c8de3ed310dea6365a5434e01d40755 453 Pfam PF01554 MatE 23 181 3.8E-20 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS19115 5c8de3ed310dea6365a5434e01d40755 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 2.4E-71 T 29-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AM474_RS29065 4a4d1f2bdb96e5c4ea076bfd165fc5c3 421 Gene3D G3DSA:2.40.128.130 85 388 1.6E-12 T 29-03-2018 AM474_RS29065 4a4d1f2bdb96e5c4ea076bfd165fc5c3 421 Pfam PF13557 Putative MetA-pathway of phenol degradation 121 417 4.2E-5 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AM474_RS29065 4a4d1f2bdb96e5c4ea076bfd165fc5c3 421 SUPERFAMILY SSF56935 93 400 4.03E-5 T 29-03-2018 AM474_RS29065 4a4d1f2bdb96e5c4ea076bfd165fc5c3 421 Gene3D G3DSA:1.20.120.330 16 84 6.9E-4 T 29-03-2018 AM474_RS00510 573d88134f49c5766ae900ed6970b3e0 323 Gene3D G3DSA:3.10.180.10 8 198 0.32 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00510 573d88134f49c5766ae900ed6970b3e0 323 Gene3D G3DSA:3.10.180.10 199 321 2.6E-8 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS00510 573d88134f49c5766ae900ed6970b3e0 323 SUPERFAMILY SSF54593 10 287 3.68E-9 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS07775 f7a678fdc882f935e272e614a827a14e 288 Pfam PF01904 Protein of unknown function DUF72 23 261 2.5E-51 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS07775 f7a678fdc882f935e272e614a827a14e 288 Gene3D G3DSA:3.20.20.410 2 267 4.2E-66 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS07775 f7a678fdc882f935e272e614a827a14e 288 SUPERFAMILY SSF117396 5 264 6.93E-69 T 29-03-2018 IPR002763 Protein of unknown function DUF72 AM474_RS30715 4661236d751fac829c284a5880fff8d8 215 SUPERFAMILY SSF53955 4 215 5.29E-115 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS30715 4661236d751fac829c284a5880fff8d8 215 Gene3D G3DSA:1.10.3690.10 1 215 5.4E-109 T 29-03-2018 AM474_RS30715 4661236d751fac829c284a5880fff8d8 215 Pfam PF11508 Protein of unknown function (DUF3218) 3 215 1.2E-145 T 29-03-2018 IPR021593 Protein of unknown function DUF3218 AM474_RS01800 b1b341cd0af8bdf109e5b23936aec792 405 Pfam PF06527 TniQ 8 165 8.8E-26 T 29-03-2018 IPR009492 TniQ AM474_RS26225 b1b341cd0af8bdf109e5b23936aec792 405 Pfam PF06527 TniQ 8 165 8.8E-26 T 29-03-2018 IPR009492 TniQ AM474_RS02325 fdcc660dbbc53857efe25eb1646c328e 249 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 244 1.3E-59 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM474_RS02325 fdcc660dbbc53857efe25eb1646c328e 249 Pfam PF05100 Phage minor tail protein L 25 244 9.4E-71 T 29-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail AM474_RS21115 ec027a4df7f456370ca9619c58b076f9 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 8.6E-54 T 29-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM474_RS21115 ec027a4df7f456370ca9619c58b076f9 157 Pfam PF02470 MlaD protein 38 116 2.1E-20 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS07385 cd81e375f7b752d0b95476db74618325 238 Pfam PF03942 DTW domain 28 214 1.6E-42 T 29-03-2018 IPR005636 DTW AM474_RS07385 cd81e375f7b752d0b95476db74618325 238 SMART SM01144 26 219 4.0E-74 T 29-03-2018 IPR005636 DTW AM474_RS21010 c13bbb5020acaf9b58128b0057f0a1d3 282 Gene3D G3DSA:3.60.110.10 1 271 4.4E-73 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS21010 c13bbb5020acaf9b58128b0057f0a1d3 282 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 29-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AM474_RS21010 c13bbb5020acaf9b58128b0057f0a1d3 282 Pfam PF00795 Carbon-nitrogen hydrolase 3 258 2.1E-51 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS21010 c13bbb5020acaf9b58128b0057f0a1d3 282 SUPERFAMILY SSF56317 1 268 4.84E-76 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS13765 02416dc8074146fff31aa2e071000952 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 132 7.0E-28 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM474_RS17135 9560090e4194ddd0488bf07f1231a4a5 132 Gene3D G3DSA:3.40.630.30 1 129 5.6E-13 T 29-03-2018 AM474_RS17135 9560090e4194ddd0488bf07f1231a4a5 132 SUPERFAMILY SSF55729 7 124 1.28E-12 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS17135 9560090e4194ddd0488bf07f1231a4a5 132 Pfam PF12568 Acetyltransferase (GNAT) domain 2 124 7.4E-32 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS16675 8525ee36edfdcd8cfee0df28dd4b1134 374 Pfam PF12698 ABC-2 family transporter protein 28 363 1.9E-29 T 29-03-2018 AM474_RS16675 8525ee36edfdcd8cfee0df28dd4b1134 374 Gene3D G3DSA:3.40.1710.10 40 190 7.9E-20 T 29-03-2018 AM474_RS21540 2fddb44d62bc068fe5d986ae848f186e 354 Pfam PF09375 Imelysin 36 332 1.1E-56 T 29-03-2018 IPR018976 Peptidase M75, Imelysin AM474_RS15655 36bbc81fd5b5a203ede101292a319d64 81 Pfam PF04226 Transglycosylase associated protein 33 80 3.1E-12 T 29-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AM474_RS28690 bfe5d9ed526a692702b3325a990c9128 192 SUPERFAMILY SSF109604 7 179 3.38E-38 T 29-03-2018 AM474_RS28690 bfe5d9ed526a692702b3325a990c9128 192 Pfam PF13023 HD domain 16 171 5.2E-41 T 29-03-2018 IPR006674 HD domain AM474_RS28690 bfe5d9ed526a692702b3325a990c9128 192 Gene3D G3DSA:1.10.3210.10 2 184 3.0E-40 T 29-03-2018 AM474_RS31915 0e8583ec82603957d927c2e607ae2c67 346 Pfam PF14436 Bacterial EndoU nuclease 236 336 2.2E-16 T 29-03-2018 IPR029501 Bacterial EndoU nuclease AM474_RS01325 587df741874e88a1cb580ac7deecf84f 367 Pfam PF07759 Protein of unknown function (DUF1615) 49 363 2.0E-147 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 AM474_RS01325 587df741874e88a1cb580ac7deecf84f 367 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 14 363 0.0 T 29-03-2018 IPR011673 Protein of unknown function DUF1615 AM474_RS31125 1012d462e031c3e18221281c5d220c7d 339 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 39 330 1.1E-50 T 29-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AM474_RS31125 1012d462e031c3e18221281c5d220c7d 339 SUPERFAMILY SSF51197 27 332 1.83E-84 T 29-03-2018 AM474_RS31125 1012d462e031c3e18221281c5d220c7d 339 Gene3D G3DSA:3.60.130.10 22 333 5.4E-67 T 29-03-2018 AM474_RS06270 5f109a00ad99dad5da1e6a80ce5082c3 209 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 20 200 1.7E-52 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM474_RS06270 5f109a00ad99dad5da1e6a80ce5082c3 209 PIRSF PIRSF020680 10 207 6.7E-63 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM474_RS06270 5f109a00ad99dad5da1e6a80ce5082c3 209 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 18 201 1.2E-57 T 29-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 AM474_RS06270 5f109a00ad99dad5da1e6a80ce5082c3 209 SUPERFAMILY SSF159709 26 202 9.02E-54 T 29-03-2018 AM474_RS30275 25ec30fe1abc153a63dd4cfa1161a413 378 SUPERFAMILY SSF81298 26 378 3.01E-139 T 29-03-2018 IPR035099 Anthrax toxin, edema factor, C-terminal KEGG: 00230+4.6.1.1 AM474_RS30275 25ec30fe1abc153a63dd4cfa1161a413 378 Pfam PF03497 Anthrax toxin LF subunit 40 203 1.2E-67 T 29-03-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 AM474_RS30275 25ec30fe1abc153a63dd4cfa1161a413 378 Gene3D G3DSA:3.90.1760.10 67 211 3.7E-38 T 29-03-2018 IPR005165 Anthrax toxin, edema factor, central GO:0005576|GO:0008294|GO:0009405 KEGG: 00230+4.6.1.1 AM474_RS00300 36b6d16af33b73011bb18cd423b2d059 162 Gene3D G3DSA:1.20.1290.10 6 159 2.5E-23 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS00300 36b6d16af33b73011bb18cd423b2d059 162 SUPERFAMILY SSF69118 30 158 7.98E-23 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS00300 36b6d16af33b73011bb18cd423b2d059 162 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 113 1.2E-6 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS23870 eb7516fd430917af8dd34d6d2b2e97d5 83 SUPERFAMILY SSF64307 6 82 1.07E-22 T 29-03-2018 IPR001455 TusA-like domain AM474_RS23870 eb7516fd430917af8dd34d6d2b2e97d5 83 Pfam PF01206 Sulfurtransferase TusA 14 82 1.1E-21 T 29-03-2018 IPR001455 TusA-like domain AM474_RS23870 eb7516fd430917af8dd34d6d2b2e97d5 83 Gene3D G3DSA:3.30.110.40 6 83 3.1E-25 T 29-03-2018 IPR001455 TusA-like domain AM474_RS23870 eb7516fd430917af8dd34d6d2b2e97d5 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 15 39 - T 29-03-2018 IPR001455 TusA-like domain AM474_RS09665 de4d883b14dd5fd689c5e0f553766ec0 642 Gene3D G3DSA:1.10.443.10 107 491 0.0013 T 29-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM474_RS21785 989604be29848654d878af3457acc016 119 Pfam PF07238 PilZ domain 5 98 2.9E-5 T 29-03-2018 IPR009875 PilZ domain GO:0035438 AM474_RS21785 989604be29848654d878af3457acc016 119 Gene3D G3DSA:2.40.10.220 8 119 1.9E-6 T 29-03-2018 AM474_RS01980 76cc8bf61db0dd3e702d9bbf096a0609 109 Pfam PF05957 Bacterial protein of unknown function (DUF883) 17 109 8.1E-29 T 29-03-2018 IPR010279 Protein of unknown function DUF883, ElaB AM474_RS21665 2e230e8e694d29db61f7f6c7a128dc0d 261 SMART SM00849 29 225 2.0E-21 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS21665 2e230e8e694d29db61f7f6c7a128dc0d 261 Gene3D G3DSA:3.60.15.10 21 245 2.0E-27 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS21665 2e230e8e694d29db61f7f6c7a128dc0d 261 SUPERFAMILY SSF56281 12 243 3.01E-31 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS21665 2e230e8e694d29db61f7f6c7a128dc0d 261 Pfam PF00753 Metallo-beta-lactamase superfamily 27 225 7.6E-23 T 29-03-2018 IPR001279 Metallo-beta-lactamase AM474_RS27645 f3b458e869e09fb4710594a7e17b7de8 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 1.0E-11 T 29-03-2018 IPR027379 Cardiolipin synthase N-terminal AM474_RS09420 225b9d440f4f5dbb46f376332a8c602c 653 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 5 490 3.9E-181 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS09420 225b9d440f4f5dbb46f376332a8c602c 653 ProSitePatterns PS01303 BCCT family of transporters signature. 306 315 - T 29-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS09420 225b9d440f4f5dbb46f376332a8c602c 653 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 43 488 9.1E-156 T 29-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AM474_RS06025 d059711350a6241ac774e5238fea74b1 96 Pfam PF10262 Rdx family 8 80 2.0E-32 T 29-03-2018 IPR011893 Selenoprotein, Rdx type AM474_RS06025 d059711350a6241ac774e5238fea74b1 96 Gene3D G3DSA:3.40.30.10 1 96 5.6E-42 T 29-03-2018 AM474_RS06025 d059711350a6241ac774e5238fea74b1 96 SUPERFAMILY SSF52833 6 89 3.35E-28 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS06025 d059711350a6241ac774e5238fea74b1 96 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 8 79 1.2E-22 T 29-03-2018 IPR011893 Selenoprotein, Rdx type AM474_RS23810 820feffdb079dd19efa4dcd34d81f764 839 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 29-03-2018 IPR018030 Fimbrial membrane usher, conserved site AM474_RS23810 820feffdb079dd19efa4dcd34d81f764 839 Pfam PF13953 PapC C-terminal domain 759 820 4.7E-15 T 29-03-2018 IPR025949 PapC-like, C-terminal domain AM474_RS23810 820feffdb079dd19efa4dcd34d81f764 839 Pfam PF00577 Outer membrane usher protein 199 749 9.4E-166 T 29-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 AM474_RS23810 820feffdb079dd19efa4dcd34d81f764 839 Pfam PF13954 PapC N-terminal domain 36 184 5.9E-41 T 29-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 AM474_RS23810 820feffdb079dd19efa4dcd34d81f764 839 SUPERFAMILY SSF141729 58 176 2.49E-29 T 29-03-2018 AM474_RS02375 6d6bcf0a8f386debc785a271a8021c8f 161 Gene3D G3DSA:1.10.720.40 111 161 0.042 T 29-03-2018 IPR011015 LEM/LEM-like domain AM474_RS08390 dda6946ac32d7c6fffb7bc0d88af5334 88 Pfam PF00462 Glutaredoxin 9 66 1.9E-10 T 29-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM474_RS08390 dda6946ac32d7c6fffb7bc0d88af5334 88 Gene3D G3DSA:3.40.30.10 7 75 2.8E-13 T 29-03-2018 AM474_RS08390 dda6946ac32d7c6fffb7bc0d88af5334 88 SUPERFAMILY SSF52833 4 84 1.96E-13 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32355 07cbd2c2336f34459f28b5efee841085 311 Pfam PF01148 Cytidylyltransferase family 43 307 1.0E-69 T 29-03-2018 AM474_RS28635 77cb91bf5761874d9eca866ad4fbcc12 175 Pfam PF11356 Type II secretion system protein C 38 162 9.5E-13 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal AM474_RS27820 70382faa4ca9eda09ea919cafb887090 115 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 115 5.0E-55 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 AM474_RS27820 70382faa4ca9eda09ea919cafb887090 115 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 114 9.0E-41 T 29-03-2018 IPR013348 Type III secretion system YscG GO:0009405 AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 Gene3D G3DSA:1.20.1050.10 96 213 7.3E-21 T 29-03-2018 AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 SUPERFAMILY SSF52833 1 90 1.17E-23 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 SUPERFAMILY SSF47616 81 211 1.39E-26 T 29-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 4.7E-87 T 29-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 2.1E-13 T 29-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM474_RS32010 c7575cc0da67adfbd26a1c038edd1f30 214 Gene3D G3DSA:3.40.30.10 1 95 2.4E-25 T 29-03-2018 AM474_RS05440 f52df6db99bb3e6b13f0e7b649170122 208 SMART SM00479 31 204 4.1E-25 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS05440 f52df6db99bb3e6b13f0e7b649170122 208 Gene3D G3DSA:1.20.5.140 181 201 9.7E-5 T 29-03-2018 AM474_RS05440 f52df6db99bb3e6b13f0e7b649170122 208 Gene3D G3DSA:3.30.420.10 21 176 3.7E-27 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS05440 f52df6db99bb3e6b13f0e7b649170122 208 Pfam PF00929 Exonuclease 34 194 2.4E-18 T 29-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM474_RS05440 f52df6db99bb3e6b13f0e7b649170122 208 SUPERFAMILY SSF53098 22 201 8.39E-36 T 29-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 AM474_RS27515 0069dce9ecc94dbc4248fdee9f434924 595 PIRSF PIRSF028304 1 595 1.0E-183 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS27515 0069dce9ecc94dbc4248fdee9f434924 595 Pfam PF05947 Type VI secretion system, TssF 5 594 4.7E-179 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS27515 0069dce9ecc94dbc4248fdee9f434924 595 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 3 595 5.5E-181 T 29-03-2018 IPR010272 Type VI secretion system, TssF-like AM474_RS29200 520b93b3f380a4425dac4b26aa56b211 287 Pfam PF00892 EamA-like transporter family 146 275 2.0E-14 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS29200 520b93b3f380a4425dac4b26aa56b211 287 Pfam PF00892 EamA-like transporter family 7 135 8.7E-10 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS29200 520b93b3f380a4425dac4b26aa56b211 287 SUPERFAMILY SSF103481 42 139 2.35E-8 T 29-03-2018 AM474_RS29200 520b93b3f380a4425dac4b26aa56b211 287 SUPERFAMILY SSF103481 182 278 6.41E-9 T 29-03-2018 AM474_RS05355 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 110 3.0E-49 T 29-03-2018 IPR008231 Probable chaperone CsaA AM474_RS05355 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 SUPERFAMILY SSF50249 4 110 5.14E-32 T 29-03-2018 IPR012340 Nucleic acid-binding, OB-fold AM474_RS05355 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 Pfam PF01588 Putative tRNA binding domain 14 108 2.2E-16 T 29-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM474_RS05355 7ecdbcbdfb04b70d052c1fdbe28ac1ee 111 Gene3D G3DSA:2.40.50.140 1 111 2.0E-21 T 29-03-2018 AM474_RS05030 f537ea45bafe056347ea85a640648788 84 Pfam PF06305 Lipopolysaccharide assembly protein A domain 30 80 2.4E-6 T 29-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 AM474_RS22940 34ccf896d23248e045e3eb525b1ca80b 339 Pfam PF10974 Protein of unknown function (DUF2804) 24 338 3.8E-76 T 29-03-2018 IPR021243 Protein of unknown function DUF2804 AM474_RS28495 ec3e30fc70b6a006fca18316999b4260 165 SUPERFAMILY SSF55826 5 164 2.75E-40 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS28495 ec3e30fc70b6a006fca18316999b4260 165 Pfam PF04073 Aminoacyl-tRNA editing domain 26 152 4.8E-26 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS28495 ec3e30fc70b6a006fca18316999b4260 165 Gene3D G3DSA:3.90.960.10 1 165 4.4E-29 T 29-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AM474_RS32385 b2cdf16dc1197084352ca43b317c8d9e 1221 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 900 1221 4.8E-59 T 29-03-2018 IPR007452 Translocation and assembly module TamB AM474_RS32385 b2cdf16dc1197084352ca43b317c8d9e 1221 Gene3D G3DSA:2.160.20.10 212 920 0.037 T 29-03-2018 IPR012334 Pectin lyase fold AM474_RS22780 10d8339b5d7c7ceb608ab36a4d1e1889 111 Pfam PF05154 TM2 domain 17 75 2.6E-18 T 29-03-2018 IPR007829 TM2 domain AM474_RS05695 424c19d293080793d9eafdb1faf17dda 440 Pfam PF07396 Phosphate-selective porin O and P 58 440 1.5E-108 T 29-03-2018 IPR010870 Phosphate-selective porin O/P AM474_RS05695 424c19d293080793d9eafdb1faf17dda 440 Gene3D G3DSA:2.40.160.10 30 440 7.6E-64 T 29-03-2018 AM474_RS05695 424c19d293080793d9eafdb1faf17dda 440 SUPERFAMILY SSF56935 284 440 1.9E-24 T 29-03-2018 AM474_RS05695 424c19d293080793d9eafdb1faf17dda 440 SUPERFAMILY SSF56935 55 250 1.9E-24 T 29-03-2018 AM474_RS11960 9ffa5c932c94592e2c610b60d8c7df85 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 214 9.0E-10 T 29-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM474_RS11960 9ffa5c932c94592e2c610b60d8c7df85 247 SUPERFAMILY SSF56300 150 231 1.58E-24 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS11960 9ffa5c932c94592e2c610b60d8c7df85 247 SUPERFAMILY SSF56300 1 107 1.58E-24 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS11960 9ffa5c932c94592e2c610b60d8c7df85 247 Gene3D G3DSA:3.60.21.10 1 244 4.0E-29 T 29-03-2018 IPR029052 Metallo-dependent phosphatase-like AM474_RS13960 83d26590c36dc527af412aab0b5a6f1b 444 Pfam PF03573 outer membrane porin, OprD family 29 442 2.1E-152 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS13960 83d26590c36dc527af412aab0b5a6f1b 444 Gene3D G3DSA:2.40.160.10 2 444 1.9E-119 T 29-03-2018 AM474_RS11880 829bfb87cb60de57f4c783025b34dba3 162 Pfam PF01863 Protein of unknown function DUF45 93 154 1.1E-12 T 29-03-2018 IPR002725 Protein of unknown function DUF45 AM474_RS06745 937887c589bfbc7218fc730b1ec1524a 442 SUPERFAMILY SSF50182 188 255 1.18E-11 T 29-03-2018 IPR010920 LSM domain AM474_RS06745 937887c589bfbc7218fc730b1ec1524a 442 Gene3D G3DSA:2.30.30.60 205 255 8.9E-11 T 29-03-2018 AM474_RS06745 937887c589bfbc7218fc730b1ec1524a 442 Pfam PF00924 Mechanosensitive ion channel 146 399 3.5E-44 T 29-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AM474_RS07920 8dd9b6c18cf4e83858c5cfd6126b1acd 231 SUPERFAMILY SSF158682 76 227 2.22E-22 T 29-03-2018 AM474_RS07920 8dd9b6c18cf4e83858c5cfd6126b1acd 231 Gene3D G3DSA:1.10.3680.10 83 230 2.6E-12 T 29-03-2018 IPR029024 TerB-like AM474_RS07920 8dd9b6c18cf4e83858c5cfd6126b1acd 231 Pfam PF04391 Protein of unknown function (DUF533) 41 223 2.5E-66 T 29-03-2018 IPR007486 Inner membrane protein YebE AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.0E-29 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.0E-29 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.0E-29 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.0E-29 T 29-03-2018 IPR003004 GspF/PilC family AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 5.0E-173 T 29-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.4E-31 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS22130 9d92a700d479f2fe67ed50dd40063354 404 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.6E-28 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS27575 20ed14a645590ed8130390366a1519c0 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 1.9E-9 T 29-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AM474_RS27575 20ed14a645590ed8130390366a1519c0 126 SUPERFAMILY SSF54593 4 119 1.61E-21 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS27575 20ed14a645590ed8130390366a1519c0 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 6 27 - T 29-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 AM474_RS27575 20ed14a645590ed8130390366a1519c0 126 Gene3D G3DSA:3.10.180.10 1 125 4.8E-18 T 29-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AM474_RS20310 57648571effecb826468a75fad8e8778 67 Gene3D G3DSA:4.10.1050.10 6 51 7.6E-4 T 29-03-2018 AM474_RS20310 57648571effecb826468a75fad8e8778 67 Pfam PF04328 Selenoprotein, putative 5 67 2.4E-30 T 29-03-2018 IPR007423 Selenoprotein, putative AM474_RS15080 83edce0510170e791aa40db96d6f5ed0 322 SMART SM00833 235 318 1.2E-6 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS15080 83edce0510170e791aa40db96d6f5ed0 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 168 2.7E-38 T 29-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AM474_RS15080 83edce0510170e791aa40db96d6f5ed0 322 Gene3D G3DSA:3.40.50.300 5 170 2.3E-22 T 29-03-2018 AM474_RS15080 83edce0510170e791aa40db96d6f5ed0 322 SUPERFAMILY SSF52540 4 165 2.6E-23 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS15080 83edce0510170e791aa40db96d6f5ed0 322 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 237 318 5.8E-8 T 29-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AM474_RS19925 d171b3a87a5eba13a231897830a74205 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 92 2.8E-17 T 29-03-2018 IPR007711 Toxin HigB-1 AM474_RS19925 d171b3a87a5eba13a231897830a74205 92 Gene3D G3DSA:3.30.2310.20 1 92 1.7E-26 T 29-03-2018 AM474_RS19925 d171b3a87a5eba13a231897830a74205 92 SUPERFAMILY SSF143011 1 92 6.08E-15 T 29-03-2018 IPR035095 Toxin RelE-like domain AM474_RS15460 b8775cb1a8677ba400ef0a6e38c670bb 278 Pfam PF08241 Methyltransferase domain 64 158 1.5E-17 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS15460 b8775cb1a8677ba400ef0a6e38c670bb 278 Gene3D G3DSA:3.40.50.150 28 229 6.1E-32 T 29-03-2018 AM474_RS15460 b8775cb1a8677ba400ef0a6e38c670bb 278 SUPERFAMILY SSF53335 49 229 4.56E-34 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS01135 260dfadb4dd743b75b35d36d29fb994d 104 Pfam PF03413 Peptidase propeptide and YPEB domain 43 101 1.6E-10 T 29-03-2018 IPR025711 PepSY domain AM474_RS01135 260dfadb4dd743b75b35d36d29fb994d 104 Gene3D G3DSA:3.10.450.40 43 101 3.2E-14 T 29-03-2018 AM474_RS05730 13cf00c63dcbd80775a28dc3d377ff9a 79 Pfam PF13490 Putative zinc-finger 4 38 3.1E-8 T 29-03-2018 IPR027383 Putative zinc-finger AM474_RS16910 56f9e6ed8c63f26724756ebd8c06e85a 147 Pfam PF03061 Thioesterase superfamily 28 111 7.3E-15 T 29-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AM474_RS16910 56f9e6ed8c63f26724756ebd8c06e85a 147 Gene3D G3DSA:3.10.129.10 8 147 7.7E-39 T 29-03-2018 AM474_RS16910 56f9e6ed8c63f26724756ebd8c06e85a 147 SUPERFAMILY SSF54637 9 142 2.26E-38 T 29-03-2018 IPR029069 HotDog domain AM474_RS09360 3748ca3e1a7eb42f10777e4c630a0221 455 Gene3D G3DSA:2.50.20.10 161 451 4.5E-60 T 29-03-2018 AM474_RS09360 3748ca3e1a7eb42f10777e4c630a0221 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 2.0E-158 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS01730 b9956f15ce69b36917dbea5449e0edee 416 Gene3D G3DSA:2.60.60.30 14 167 1.6E-23 T 29-03-2018 AM474_RS01730 b9956f15ce69b36917dbea5449e0edee 416 Gene3D G3DSA:2.60.60.30 218 381 9.3E-6 T 29-03-2018 AM474_RS01730 b9956f15ce69b36917dbea5449e0edee 416 Pfam PF02342 TerD domain 24 169 6.9E-19 T 29-03-2018 IPR003325 TerD domain GO:0006950 AM474_RS25790 af68daee8d595ffc8847ebac9776021b 152 Gene3D G3DSA:2.40.160.20 13 149 4.3E-35 T 29-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AM474_RS03805 dc2101a1773031c354bee6be022e66e7 229 Gene3D G3DSA:1.10.3720.10 1 225 1.8E-40 T 29-03-2018 AM474_RS03805 dc2101a1773031c354bee6be022e66e7 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 3.0E-26 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS03805 dc2101a1773031c354bee6be022e66e7 229 SUPERFAMILY SSF161098 8 206 1.31E-41 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS03805 dc2101a1773031c354bee6be022e66e7 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 5.4E-18 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS10760 560c02b2b5eaf2e4bc481462d829771a 247 SUPERFAMILY SSF53335 6 246 7.49E-39 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS10760 560c02b2b5eaf2e4bc481462d829771a 247 Pfam PF13649 Methyltransferase domain 45 135 1.8E-11 T 29-03-2018 AM474_RS10760 560c02b2b5eaf2e4bc481462d829771a 247 Gene3D G3DSA:3.40.50.150 22 235 4.1E-24 T 29-03-2018 AM474_RS15210 3e476c70504d8f8e34a47dd07ccaeb38 217 SUPERFAMILY SSF52499 7 209 3.53E-48 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS15210 3e476c70504d8f8e34a47dd07ccaeb38 217 Gene3D G3DSA:3.40.50.850 3 215 2.5E-48 T 29-03-2018 AM474_RS15210 3e476c70504d8f8e34a47dd07ccaeb38 217 Pfam PF00857 Isochorismatase family 19 199 1.9E-34 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS31400 4d9c3ae8d9469ac99dcb7a1c6297565c 252 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 21 233 2.4E-36 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS31400 4d9c3ae8d9469ac99dcb7a1c6297565c 252 Pfam PF09850 Type VI secretion system protein DotU 73 227 2.2E-30 T 29-03-2018 IPR017732 Type IV / VI secretion system, DotU AM474_RS20420 6e261a65639c2331febaa9553669af61 270 Gene3D G3DSA:3.30.460.10 2 168 3.2E-5 T 29-03-2018 AM474_RS20420 6e261a65639c2331febaa9553669af61 270 Pfam PF10127 Predicted nucleotidyltransferase 13 260 3.5E-91 T 29-03-2018 IPR018775 Nucleotidyltransferase, predicted AM474_RS01245 5b4cd1641de8d9931a517fa771ea6c1d 250 Pfam PF08241 Methyltransferase domain 42 130 1.2E-16 T 29-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AM474_RS01245 5b4cd1641de8d9931a517fa771ea6c1d 250 Gene3D G3DSA:3.40.50.150 5 216 8.6E-28 T 29-03-2018 AM474_RS01245 5b4cd1641de8d9931a517fa771ea6c1d 250 SUPERFAMILY SSF53335 1 196 3.62E-32 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS32145 16e4711bb868de473d2ebfeae1a3b659 151 Pfam PF14437 MafB19-like deaminase 2 111 1.4E-21 T 29-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM474_RS32145 16e4711bb868de473d2ebfeae1a3b659 151 Gene3D G3DSA:3.40.140.10 1 151 2.1E-37 T 29-03-2018 AM474_RS32145 16e4711bb868de473d2ebfeae1a3b659 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 29-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM474_RS32145 16e4711bb868de473d2ebfeae1a3b659 151 SUPERFAMILY SSF53927 2 127 2.68E-40 T 29-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM474_RS04965 12b6163f82073d8e4bf843d4f841a031 665 Gene3D G3DSA:3.40.50.720 295 646 9.9E-58 T 29-03-2018 AM474_RS04965 12b6163f82073d8e4bf843d4f841a031 665 Pfam PF02719 Polysaccharide biosynthesis protein 301 608 7.0E-129 T 29-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AM474_RS04965 12b6163f82073d8e4bf843d4f841a031 665 Gene3D G3DSA:3.40.50.720 161 282 2.3E-26 T 29-03-2018 AM474_RS04965 12b6163f82073d8e4bf843d4f841a031 665 SUPERFAMILY SSF53335 159 345 7.47E-17 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS04965 12b6163f82073d8e4bf843d4f841a031 665 SUPERFAMILY SSF51735 299 587 8.32E-51 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS08655 cf1f40351c9d69eb1f21e75e230cdf6f 153 Pfam PF11162 Protein of unknown function (DUF2946) 12 149 2.0E-18 T 29-03-2018 IPR021333 Protein of unknown function DUF2946 AM474_RS03810 944634fcd3b84aae49989bf8cab20294 237 Gene3D G3DSA:1.10.3720.10 2 228 5.6E-31 T 29-03-2018 AM474_RS03810 944634fcd3b84aae49989bf8cab20294 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 207 1.9E-12 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS03810 944634fcd3b84aae49989bf8cab20294 237 SUPERFAMILY SSF161098 17 217 4.19E-37 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS03810 944634fcd3b84aae49989bf8cab20294 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 1.4E-15 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS23690 9b754478a327508a0b43c366b3263fb7 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 9 177 1.9E-51 T 29-03-2018 IPR010323 Protein of unknown function DUF924 AM474_RS23690 9b754478a327508a0b43c366b3263fb7 180 SUPERFAMILY SSF48452 7 176 5.31E-60 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS23690 9b754478a327508a0b43c366b3263fb7 180 Gene3D G3DSA:1.20.58.320 4 80 2.4E-18 T 29-03-2018 AM474_RS23690 9b754478a327508a0b43c366b3263fb7 180 Gene3D G3DSA:1.25.40.10 81 179 1.4E-33 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS14520 c3641bf4249b0cff7cfdd5906774b0ed 168 Gene3D G3DSA:1.20.120.450 2 168 8.6E-72 T 29-03-2018 AM474_RS14520 c3641bf4249b0cff7cfdd5906774b0ed 168 SUPERFAMILY SSF109854 4 166 2.01E-65 T 29-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AM474_RS14520 c3641bf4249b0cff7cfdd5906774b0ed 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 6.2E-66 T 29-03-2018 IPR018531 Domain of unknown function DUF1993 AM474_RS09005 121ac341efe67599f2b671019a91051d 238 PIRSF PIRSF000851 2 238 7.9E-90 T 29-03-2018 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 AM474_RS09005 121ac341efe67599f2b671019a91051d 238 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 68 5.5E-6 T 29-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM474_RS11700 8c63b60d88c1df87905d2289a7e49a74 168 Pfam PF13590 Domain of unknown function (DUF4136) 31 165 6.0E-9 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 AM474_RS11910 a0a8a59b20e3acfa2a48560fc892312d 113 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 36 104 1.4E-12 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM474_RS11910 a0a8a59b20e3acfa2a48560fc892312d 113 Gene3D G3DSA:3.40.190.10 1 104 2.8E-4 T 29-03-2018 AM474_RS11910 a0a8a59b20e3acfa2a48560fc892312d 113 SUPERFAMILY SSF141488 32 111 1.44E-15 T 29-03-2018 IPR018660 C-type lysozyme inhibitor AM474_RS24385 ba2eebbafed23a51cf8dbb3eb86f3c6e 97 Pfam PF05400 Flagellar protein FliT 18 93 5.3E-7 T 29-03-2018 IPR008622 Flagellar protein FliT AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 Pfam PF07690 Major Facilitator Superfamily 35 429 7.2E-32 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 Gene3D G3DSA:1.20.1250.20 277 527 7.2E-15 T 29-03-2018 AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 SUPERFAMILY SSF103473 266 439 1.11E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 SUPERFAMILY SSF103473 17 213 1.11E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 SUPERFAMILY SSF103473 493 517 1.11E-34 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS03355 a5db0b43013da924bd22d70e7e355942 530 Gene3D G3DSA:1.20.1250.20 22 219 2.3E-17 T 29-03-2018 AM474_RS03545 25ef63431cdf206d7591415cd68cae1c 256 Pfam PF05235 CHAD domain 23 214 5.1E-27 T 29-03-2018 IPR007899 CHAD domain AM474_RS03545 25ef63431cdf206d7591415cd68cae1c 256 SMART SM00880 11 253 4.3E-41 T 29-03-2018 IPR007899 CHAD domain AM474_RS29695 dcf5d3ed2d6e802bcff31d5172ee26c9 553 Gene3D G3DSA:1.25.40.120 47 438 8.6E-5 T 29-03-2018 AM474_RS30115 caad487142cb84a643d448ebdcc6d6dd 245 Gene3D G3DSA:3.60.10.10 3 244 2.7E-29 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS30115 caad487142cb84a643d448ebdcc6d6dd 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 236 1.5E-11 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS30115 caad487142cb84a643d448ebdcc6d6dd 245 SUPERFAMILY SSF56219 5 243 7.46E-43 T 29-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM474_RS14360 c190d5a9d9e3504476c172333044c69d 169 Gene3D G3DSA:3.10.450.40 8 156 1.4E-24 T 29-03-2018 AM474_RS14360 c190d5a9d9e3504476c172333044c69d 169 SUPERFAMILY SSF160719 37 152 9.29E-10 T 29-03-2018 AM474_RS14360 c190d5a9d9e3504476c172333044c69d 169 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 161 1.5E-27 T 29-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein AM474_RS14360 c190d5a9d9e3504476c172333044c69d 169 Pfam PF04965 Gene 25-like lysozyme 39 141 1.3E-21 T 29-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD AM474_RS20700 0b0f22b4457e926da839153699d001ff 141 Gene3D G3DSA:3.40.630.30 1 141 1.5E-23 T 29-03-2018 AM474_RS20700 0b0f22b4457e926da839153699d001ff 141 SUPERFAMILY SSF55729 1 127 8.14E-22 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS20700 0b0f22b4457e926da839153699d001ff 141 Pfam PF00583 Acetyltransferase (GNAT) family 23 120 1.6E-11 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS15420 3881b5d64e5daf1383d40c15443e8fac 120 Pfam PF09498 Protein of unknown function (DUF2388) 54 117 2.1E-21 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS15420 3881b5d64e5daf1383d40c15443e8fac 120 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 51 117 9.0E-20 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS08845 34d593df41a0579ed2b519c2551bf28a 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 353 1.1E-118 T 29-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AM474_RS08845 34d593df41a0579ed2b519c2551bf28a 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 352 1.9E-73 T 29-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AM474_RS07815 43a8a3ac84058f13a7a4cc6967c62a42 134 Pfam PF14346 Domain of unknown function (DUF4398) 28 125 3.5E-30 T 29-03-2018 IPR025511 Domain of unknown function DUF4398 AM474_RS02230 7f37d4522fe559974d4c4e5cb246484e 75 Pfam PF15607 Bacterial toxin 44 13 71 3.1E-10 T 29-03-2018 IPR028946 Bacterial toxin 44 AM474_RS26005 2b241992578e27fedb63cdf62d03ebac 205 Pfam PF05076 Suppressor of fused protein (SUFU) 37 196 1.3E-19 T 29-03-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 AM474_RS17250 cf5c113a2f8df4be71dd8c29f30c12f4 190 Pfam PF13511 Domain of unknown function (DUF4124) 9 57 2.4E-14 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS21510 b2a1b62ca21a8dd5c42f773f679a4587 234 SUPERFAMILY SSF56112 18 187 6.83E-10 T 29-03-2018 IPR011009 Protein kinase-like domain AM474_RS21510 b2a1b62ca21a8dd5c42f773f679a4587 234 Gene3D G3DSA:1.10.510.10 32 211 1.6E-4 T 29-03-2018 AM474_RS21510 b2a1b62ca21a8dd5c42f773f679a4587 234 PIRSF PIRSF026326 1 234 4.1E-110 T 29-03-2018 IPR027023 Putative lipopolysaccharide kinase InaA AM474_RS21510 b2a1b62ca21a8dd5c42f773f679a4587 234 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 18 221 4.2E-74 T 29-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 AM474_RS25270 5daa400edb30299036fbb7f456db2de3 414 Gene3D G3DSA:1.20.5.1230 2 388 9.0E-8 T 29-03-2018 AM474_RS30415 dfcd290b19fade373c8b0a6250afd594 206 Pfam PF04403 Paraquat-inducible protein A 44 198 6.9E-56 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM474_RS30530 dbcd1ff6686335d0a5b081706ddf22e1 474 Gene3D G3DSA:2.50.20.10 172 470 1.3E-45 T 29-03-2018 AM474_RS30530 dbcd1ff6686335d0a5b081706ddf22e1 474 Pfam PF07044 Protein of unknown function (DUF1329) 97 469 9.0E-120 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS32175 72bf17eadbf4aff2d873c12c9e80408c 448 Pfam PF03573 outer membrane porin, OprD family 35 446 7.1E-147 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS32175 72bf17eadbf4aff2d873c12c9e80408c 448 Gene3D G3DSA:2.40.160.10 3 448 1.6E-121 T 29-03-2018 AM474_RS20175 66d3938ce389346054971e86aadfb844 192 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 8.1E-22 T 29-03-2018 IPR001727 Gdt1 family AM474_RS20175 66d3938ce389346054971e86aadfb844 192 Pfam PF01169 Uncharacterized protein family UPF0016 9 79 2.3E-19 T 29-03-2018 IPR001727 Gdt1 family AM474_RS05545 327567fab987e6c60e2444af0424acdc 265 Gene3D G3DSA:1.10.3720.10 9 264 4.1E-41 T 29-03-2018 AM474_RS05545 327567fab987e6c60e2444af0424acdc 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 262 1.3E-15 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS05545 327567fab987e6c60e2444af0424acdc 265 SUPERFAMILY SSF161098 6 263 8.5E-43 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS06690 85cf47fd7f6fdccc8755c4b577a1e30e 250 Pfam PF01925 Sulfite exporter TauE/SafE 10 241 1.2E-40 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS21325 cc9a4ef7e24080549f7553173ddecc6c 399 Pfam PF01098 Cell cycle protein 25 380 2.8E-103 T 29-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 AM474_RS21325 cc9a4ef7e24080549f7553173ddecc6c 399 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 29-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 AM474_RS21325 cc9a4ef7e24080549f7553173ddecc6c 399 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 378 4.4E-129 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM474_RS21325 cc9a4ef7e24080549f7553173ddecc6c 399 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 19 388 40.121 T 29-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 AM474_RS26345 99e54ca540bad1572b9a66101b57f9e8 150 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 142 8.6E-20 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM474_RS26345 99e54ca540bad1572b9a66101b57f9e8 150 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 51 118 1.9E-22 T 29-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 SUPERFAMILY SSF53474 79 322 1.9E-29 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 171 184 1.3E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 279 293 1.3E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 137 1.3E-6 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 Pfam PF12146 Serine aminopeptidase, S33 93 323 2.7E-30 T 29-03-2018 IPR022742 Serine aminopeptidase, S33 AM474_RS13195 26ac05d687bdbe1611bee3516669587c 339 Gene3D G3DSA:3.40.50.1820 70 338 6.8E-27 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS16465 8993de498dfad04ad14320ed6368f580 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.6E-44 T 29-03-2018 IPR013468 Conserved hypothetical protein CHP02647 AM474_RS16465 8993de498dfad04ad14320ed6368f580 77 Pfam PF06146 Phosphate-starvation-inducible E 7 71 3.5E-15 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Gene3D G3DSA:2.60.40.1180 125 197 1.5E-14 T 29-03-2018 AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Gene3D G3DSA:2.60.40.1180 198 277 6.1E-10 T 29-03-2018 AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Gene3D G3DSA:2.60.40.1180 31 124 5.6E-13 T 29-03-2018 AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Pfam PF08238 Sel1 repeat 218 251 1.9E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Pfam PF08238 Sel1 repeat 67 91 1.4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Pfam PF08238 Sel1 repeat 200 216 0.02 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Pfam PF08238 Sel1 repeat 129 164 1.8E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 Pfam PF08238 Sel1 repeat 94 128 9.1E-10 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SUPERFAMILY SSF81901 52 260 2.27E-39 T 29-03-2018 AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SMART SM00671 165 216 91.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SMART SM00671 217 252 5.0E-4 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SMART SM00671 93 128 2.9E-10 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SMART SM00671 61 92 20.0 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS12920 149c1379d40c897ab65f6996bd3d6412 328 SMART SM00671 129 164 1.7E-7 T 29-03-2018 IPR006597 Sel1-like repeat AM474_RS13460 90f3dc3541e5b72809830903f6810fe2 598 SUPERFAMILY SSF53474 204 347 2.57E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13460 90f3dc3541e5b72809830903f6810fe2 598 SUPERFAMILY SSF53474 48 65 2.57E-14 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS13460 90f3dc3541e5b72809830903f6810fe2 598 Gene3D G3DSA:3.40.50.1820 43 577 1.7E-26 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS25745 06d5b281adeb124f753b2f05c203c7c1 370 Gene3D G3DSA:3.20.20.70 1 369 2.9E-123 T 29-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM474_RS25745 06d5b281adeb124f753b2f05c203c7c1 370 SUPERFAMILY SSF51395 2 365 3.36E-121 T 29-03-2018 AM474_RS25745 06d5b281adeb124f753b2f05c203c7c1 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 342 3.1E-89 T 29-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AM474_RS15855 90e5b2d6eccdcb27d3d9f63894f346a4 321 Gene3D G3DSA:3.40.50.1820 1 316 6.9E-49 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15855 90e5b2d6eccdcb27d3d9f63894f346a4 321 SUPERFAMILY SSF53474 49 291 1.61E-55 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS15855 90e5b2d6eccdcb27d3d9f63894f346a4 321 Pfam PF07859 alpha/beta hydrolase fold 82 287 8.2E-65 T 29-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AM474_RS15855 90e5b2d6eccdcb27d3d9f63894f346a4 321 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 154 166 - T 29-03-2018 IPR033140 Lipase, GDXG, putative serine active site AM474_RS07715 ca30809410647bf9818202e4f0f55557 244 Pfam PF12679 ABC-2 family transporter protein 67 237 6.7E-9 T 29-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 AM474_RS03765 7396aea5c4d9111bbb8299c3e38b853c 197 Pfam PF01810 LysE type translocator 13 191 8.5E-19 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS01180 1d1b7be7cd6f8c35ee81d0cfcf558547 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 2.0E-34 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM474_RS01180 1d1b7be7cd6f8c35ee81d0cfcf558547 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 1.1E-38 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM474_RS01180 1d1b7be7cd6f8c35ee81d0cfcf558547 118 Gene3D G3DSA:3.30.479.10 1 118 2.2E-43 T 29-03-2018 AM474_RS01180 1d1b7be7cd6f8c35ee81d0cfcf558547 118 SUPERFAMILY SSF55620 2 117 5.34E-43 T 29-03-2018 AM474_RS01180 1d1b7be7cd6f8c35ee81d0cfcf558547 118 PIRSF PIRSF006113 1 118 1.8E-51 T 29-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 Pfam PF02547 Queuosine biosynthesis protein 4 336 9.1E-135 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 1.5E-148 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 47.897 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 SUPERFAMILY SSF111337 1 336 2.22E-137 T 29-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 Gene3D G3DSA:3.40.1780.10 1 121 9.8E-33 T 29-03-2018 AM474_RS08820 07136ab834ca1dc088541bbc1e10f79c 347 Gene3D G3DSA:3.40.1780.10 171 337 4.8E-66 T 29-03-2018 AM474_RS14275 5751017fcc8605aa6f3a351297bfaef0 523 Pfam PF00916 Sulfate permease family 16 386 7.8E-63 T 29-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AM474_RS06415 a348cf8db6bc93aeed6c8c6e4423a2f3 451 Pfam PF02321 Outer membrane efflux protein 239 423 3.0E-28 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS06415 a348cf8db6bc93aeed6c8c6e4423a2f3 451 Pfam PF02321 Outer membrane efflux protein 24 212 3.7E-19 T 29-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AM474_RS06415 a348cf8db6bc93aeed6c8c6e4423a2f3 451 SUPERFAMILY SSF56954 22 437 8.24E-79 T 29-03-2018 AM474_RS06415 a348cf8db6bc93aeed6c8c6e4423a2f3 451 Gene3D G3DSA:1.20.1600.10 15 429 8.7E-62 T 29-03-2018 AM474_RS06415 a348cf8db6bc93aeed6c8c6e4423a2f3 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 437 4.6E-113 T 29-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 AM474_RS29555 d8f6e0dc7c834389c36b52f8407ead17 98 Gene3D G3DSA:3.30.70.100 5 96 6.7E-12 T 29-03-2018 AM474_RS29555 d8f6e0dc7c834389c36b52f8407ead17 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 11 80 2.2E-13 T 29-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AM474_RS29555 d8f6e0dc7c834389c36b52f8407ead17 98 SUPERFAMILY SSF54909 10 89 8.23E-14 T 29-03-2018 IPR011008 Dimeric alpha-beta barrel AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 9.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 9.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 9.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 9.5E-50 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 247 18.347 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 5.6E-76 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 ProSitePatterns PS01218 TatC family signature. 162 181 - T 29-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM474_RS17520 d6b625479a4cfadf9713c04df8ab5205 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 20 229 2.0E-65 T 29-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM474_RS07840 64a01b3ec39e7cb7e320e85ae41c6663 248 Pfam PF01987 Mitochondrial biogenesis AIM24 8 222 1.3E-64 T 29-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 AM474_RS07840 64a01b3ec39e7cb7e320e85ae41c6663 248 Gene3D G3DSA:3.60.160.10 1 248 5.5E-76 T 29-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 AM474_RS07840 64a01b3ec39e7cb7e320e85ae41c6663 248 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 6 224 9.9E-41 T 29-03-2018 IPR002838 Mitochondrial biogenesis protein AIM24 AM474_RS07840 64a01b3ec39e7cb7e320e85ae41c6663 248 SUPERFAMILY SSF51219 6 235 3.4E-84 T 29-03-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain AM474_RS24170 ef155efdd70a56599032c33398f7fdfd 301 SUPERFAMILY SSF103481 42 142 1.06E-17 T 29-03-2018 AM474_RS24170 ef155efdd70a56599032c33398f7fdfd 301 Pfam PF00892 EamA-like transporter family 153 285 8.9E-26 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS24170 ef155efdd70a56599032c33398f7fdfd 301 Pfam PF00892 EamA-like transporter family 9 139 4.5E-26 T 29-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AM474_RS24170 ef155efdd70a56599032c33398f7fdfd 301 SUPERFAMILY SSF103481 190 291 4.32E-15 T 29-03-2018 AM474_RS19580 10133a69f441ffc2c4a179aa206b2f2b 293 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 42 272 2.5E-57 T 29-03-2018 IPR018713 Domain of unknown function DUF2236 AM474_RS21930 b876d2df6999d9be0f9f0b04f5460b65 556 Pfam PF09977 Putative Tad-like Flp pilus-assembly 55 156 2.7E-8 T 29-03-2018 IPR018705 Domain of unknown function DUF2134, membrane AM474_RS27440 d614349d393754799024dcab30124907 398 TIGRFAM TIGR00843 benE: benzoate transporter 18 393 6.8E-129 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM474_RS27440 d614349d393754799024dcab30124907 398 Pfam PF03594 Benzoate membrane transport protein 16 392 4.8E-168 T 29-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:1.20.58.340 259 326 1.3E-19 T 29-03-2018 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF143865 1 265 2.35E-40 T 29-03-2018 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 SUPERFAMILY SSF144083 261 323 8.5E-20 T 29-03-2018 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:3.30.460.20 1 124 4.6E-16 T 29-03-2018 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 Pfam PF01544 CorA-like Mg2+ transporter protein 28 321 5.9E-54 T 29-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AM474_RS16480 47173f8fbd970ce3508496d969e6035e 326 Gene3D G3DSA:1.20.58.340 133 258 1.7E-20 T 29-03-2018 AM474_RS15395 aaaf1c3004b6952232b13fe771877713 266 SUPERFAMILY SSF53850 49 253 7.44E-19 T 29-03-2018 AM474_RS15395 aaaf1c3004b6952232b13fe771877713 266 Gene3D G3DSA:3.40.190.10 23 257 2.6E-10 T 29-03-2018 AM474_RS07515 4d673271c36f7a843df2b904de639bb7 408 Pfam PF04143 Sulphur transport 239 392 1.8E-20 T 29-03-2018 IPR007272 Sulphur transport domain AM474_RS07515 4d673271c36f7a843df2b904de639bb7 408 Pfam PF04143 Sulphur transport 7 162 8.3E-26 T 29-03-2018 IPR007272 Sulphur transport domain AM474_RS08030 17b6b7b20634eb0cc6bb21ce96cf57b6 94 Pfam PF12021 Protein of unknown function (DUF3509) 5 88 4.2E-19 T 29-03-2018 IPR021898 Protein of unknown function DUF3509 AM474_RS06875 94091c77c1018d0e3243be693d2481d3 344 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 333 1.3E-139 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM474_RS06875 94091c77c1018d0e3243be693d2481d3 344 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 334 26.865 T 29-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 AM474_RS06875 94091c77c1018d0e3243be693d2481d3 344 Pfam PF03116 NQR2, RnfD, RnfE family 7 332 6.4E-103 T 29-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AM474_RS03190 af47e004f9931e09041a5d9d23b98871 296 Gene3D G3DSA:3.60.110.10 1 279 5.9E-41 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS03190 af47e004f9931e09041a5d9d23b98871 296 SUPERFAMILY SSF56317 1 269 3.01E-43 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS03190 af47e004f9931e09041a5d9d23b98871 296 Pfam PF00795 Carbon-nitrogen hydrolase 10 223 1.5E-16 T 29-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 AM474_RS19140 88d806f709195c0366383a8b08dd4cfd 411 Pfam PF08874 Domain of unknown function (DUF1835) 89 201 2.0E-14 T 29-03-2018 IPR014973 Protein of unknown function DUF1835 AM474_RS10735 4d74478fcc12d5af144e1fe3e56f5052 132 Gene3D G3DSA:3.30.1330.40 1 131 1.4E-30 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS10735 4d74478fcc12d5af144e1fe3e56f5052 132 Pfam PF01042 Endoribonuclease L-PSP 13 127 2.2E-25 T 29-03-2018 IPR006175 YjgF/YER057c/UK114 family AM474_RS10735 4d74478fcc12d5af144e1fe3e56f5052 132 SUPERFAMILY SSF55298 9 130 1.4E-35 T 29-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AM474_RS05435 ef701dd375b38ca6a5a3dcc6e98e24aa 52 Pfam PF11752 Protein of unknown function (DUF3309) 4 52 3.5E-21 T 29-03-2018 IPR021738 Protein of unknown function DUF3309 AM474_RS03405 868a508aa3d498fc91a69b9e4dfcf017 77 Pfam PF06568 Domain of unknown function (DUF1127) 26 61 5.3E-12 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AM474_RS18040 44086027777a538bf8738af12f2fd170 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 46.265 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM474_RS18040 44086027777a538bf8738af12f2fd170 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 455 2.4E-151 T 29-03-2018 IPR003846 Uncharacterised protein family UPF0061 AM474_RS10915 edeb5f5608a4048e3428d3e05bdaec43 405 SUPERFAMILY SSF51569 4 390 9.52E-144 T 29-03-2018 AM474_RS10915 edeb5f5608a4048e3428d3e05bdaec43 405 Pfam PF01474 Class-II DAHP synthetase family 160 384 1.0E-77 T 29-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AM474_RS13900 412f5063cca4db029dcfebc110d7a494 200 SUPERFAMILY SSF64438 24 169 6.5E-49 T 29-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AM474_RS13900 412f5063cca4db029dcfebc110d7a494 200 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 19 172 28.477 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AM474_RS13900 412f5063cca4db029dcfebc110d7a494 200 Pfam PF03975 CheD chemotactic sensory transduction 66 168 8.7E-32 T 29-03-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 AM474_RS24525 064998c2c933f9116e2508e5d60a55c3 190 Pfam PF13689 Domain of unknown function (DUF4154) 48 185 3.2E-32 T 29-03-2018 IPR025293 Protein of unknown function DUF4154 AM474_RS16435 d0cc80400599e90b2cc02f6a2e2b9ff6 46 PIRSF PIRSF037657 1 46 1.5E-25 T 29-03-2018 IPR017254 Lipoprotein, LppL AM474_RS16435 d0cc80400599e90b2cc02f6a2e2b9ff6 46 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 30 4.9E-8 T 29-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site AM474_RS16435 d0cc80400599e90b2cc02f6a2e2b9ff6 46 Gene3D G3DSA:3.40.190.10 1 39 1.2E-4 T 29-03-2018 AM474_RS30030 83a3f08cdb8c4ec1d4dd8c86da12df0d 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 1.8E-24 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS30030 83a3f08cdb8c4ec1d4dd8c86da12df0d 172 Pfam PF02464 Competence-damaged protein 10 159 6.4E-36 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS30030 83a3f08cdb8c4ec1d4dd8c86da12df0d 172 SUPERFAMILY SSF142433 5 163 9.15E-40 T 29-03-2018 IPR008136 CinA, C-terminal AM474_RS30030 83a3f08cdb8c4ec1d4dd8c86da12df0d 172 Gene3D G3DSA:3.90.950.20 1 167 6.8E-42 T 29-03-2018 AM474_RS00275 c97edeabeb28b5a679e2e5457a2703fd 266 Gene3D G3DSA:1.10.12.10 224 266 6.5E-14 T 29-03-2018 IPR014748 Crontonase, C-terminal AM474_RS00275 c97edeabeb28b5a679e2e5457a2703fd 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 265 2.6E-58 T 29-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 AM474_RS00275 c97edeabeb28b5a679e2e5457a2703fd 266 SUPERFAMILY SSF52096 2 264 5.86E-82 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS00275 c97edeabeb28b5a679e2e5457a2703fd 266 Gene3D G3DSA:3.90.226.10 5 223 1.2E-62 T 29-03-2018 AM474_RS18805 f1c6d88091f0f24319c1332e4b66972b 689 Pfam PF05170 AsmA family 1 575 2.4E-182 T 29-03-2018 IPR007844 AsmA AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 108 127 2.9E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 52 63 2.9E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 83 93 2.9E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 PRINTS PR00369 Flavodoxin signature 4 17 2.9E-5 T 29-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 Gene3D G3DSA:3.40.50.360 1 150 3.1E-29 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 Pfam PF00258 Flavodoxin 5 140 7.9E-20 T 29-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AM474_RS06570 7793a0e52a79c28d57d6fb190949bafd 150 SUPERFAMILY SSF52218 1 148 7.04E-36 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS09000 860e95c5a2fa3c3c218b7217fbce462b 160 Pfam PF12680 SnoaL-like domain 9 110 1.1E-17 T 29-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain AM474_RS09000 860e95c5a2fa3c3c218b7217fbce462b 160 SUPERFAMILY SSF54427 2 133 1.07E-29 T 29-03-2018 IPR032710 NTF2-like domain AM474_RS09000 860e95c5a2fa3c3c218b7217fbce462b 160 Gene3D G3DSA:3.10.450.50 4 130 2.6E-27 T 29-03-2018 AM474_RS03250 144a4ea929710bced431f81d87f1660e 97 Pfam PF13560 Helix-turn-helix domain 24 82 1.4E-11 T 29-03-2018 AM474_RS03250 144a4ea929710bced431f81d87f1660e 97 SUPERFAMILY SSF47413 23 89 7.32E-16 T 29-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AM474_RS03250 144a4ea929710bced431f81d87f1660e 97 Gene3D G3DSA:1.10.260.40 13 97 6.7E-18 T 29-03-2018 AM474_RS03250 144a4ea929710bced431f81d87f1660e 97 SMART SM00530 28 83 1.3E-11 T 29-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM474_RS02770 57be083dfb201f0bd2b803be66ac31c7 70 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 62 3.2E-25 T 29-03-2018 IPR010260 DNA-binding transcriptional activator AlpA AM474_RS12815 ff68ddfdbab3ba9a8332dbfcc84fd5c7 125 Pfam PF04241 Protein of unknown function (DUF423) 19 105 1.7E-29 T 29-03-2018 IPR006696 Protein of unknown function DUF423 AM474_RS15025 8a87bbd76632985420cefc1e8d3a43a0 132 Pfam PF08905 Domain of unknown function (DUF1850) 21 105 1.2E-22 T 29-03-2018 IPR015001 Protein of unknown function DUF1850 AM474_RS22160 967aca3d48e21703f991f1645a7dd62c 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 136 1.1E-28 T 29-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 Gene3D G3DSA:3.90.950.10 2 192 4.8E-57 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.2E-55 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 SUPERFAMILY SSF52972 2 185 7.19E-58 T 29-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.042 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 Pfam PF02545 Maf-like protein 4 185 1.5E-44 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS04060 fa6f807c5e2a222e29df3e013e736df1 192 PIRSF PIRSF006305 1 191 9.2E-45 T 29-03-2018 IPR003697 Maf-like protein GO:0047429 AM474_RS10700 d41eeacd5afbea1937d4f748e40c802c 152 SUPERFAMILY SSF55729 9 137 8.97E-32 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS10700 d41eeacd5afbea1937d4f748e40c802c 152 Gene3D G3DSA:3.40.630.30 5 139 5.8E-26 T 29-03-2018 AM474_RS10700 d41eeacd5afbea1937d4f748e40c802c 152 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 3.5E-17 T 29-03-2018 IPR000182 GNAT domain GO:0008080 AM474_RS11605 6d6aa202ad5ecd9fb5c04ce13aa80e51 348 Pfam PF13416 Bacterial extracellular solute-binding protein 49 303 1.0E-45 T 29-03-2018 AM474_RS11605 6d6aa202ad5ecd9fb5c04ce13aa80e51 348 SUPERFAMILY SSF53850 29 345 1.45E-67 T 29-03-2018 AM474_RS11605 6d6aa202ad5ecd9fb5c04ce13aa80e51 348 Gene3D G3DSA:3.40.190.10 144 301 3.7E-31 T 29-03-2018 AM474_RS11605 6d6aa202ad5ecd9fb5c04ce13aa80e51 348 Gene3D G3DSA:3.40.190.10 29 143 1.1E-11 T 29-03-2018 AM474_RS06495 b5c1ff88c2e0021dd5cd6417ed66d951 270 Pfam PF13369 Transglutaminase-like superfamily 37 184 2.4E-36 T 29-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 AM474_RS28710 507b335de04ca5c3e6bf9b1010eecac4 107 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.4E-29 T 29-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 AM474_RS28710 507b335de04ca5c3e6bf9b1010eecac4 107 SUPERFAMILY SSF103481 4 104 2.48E-22 T 29-03-2018 AM474_RS23800 4c148336c6f3500f2d117b3585bab54b 205 SUPERFAMILY SSF49401 27 205 4.03E-21 T 29-03-2018 IPR008966 Adhesion domain AM474_RS23800 4c148336c6f3500f2d117b3585bab54b 205 Gene3D G3DSA:2.60.40.1090 26 205 2.6E-28 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS23800 4c148336c6f3500f2d117b3585bab54b 205 Pfam PF00419 Fimbrial protein 28 204 1.2E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-24 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 SUPERFAMILY SSF89360 1 96 1.83E-31 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.3E-35 T 29-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.0E-53 T 29-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 29-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AM474_RS08760 5100afeb93346c21ace2586330c8ff7e 107 Gene3D G3DSA:2.60.300.12 2 107 1.1E-36 T 29-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AM474_RS00290 e28612c7b2f12cfcaa629358c3df6d48 435 Gene3D G3DSA:3.20.20.140 1 372 3.4E-61 T 29-03-2018 AM474_RS00290 e28612c7b2f12cfcaa629358c3df6d48 435 SUPERFAMILY SSF51556 9 36 2.33E-77 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS00290 e28612c7b2f12cfcaa629358c3df6d48 435 SUPERFAMILY SSF51556 66 377 2.33E-77 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS00290 e28612c7b2f12cfcaa629358c3df6d48 435 Pfam PF04909 Amidohydrolase 77 369 1.7E-27 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS01060 e01916b27c466b8a9d40dbe88b481452 331 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 329 23.413 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01060 e01916b27c466b8a9d40dbe88b481452 331 Pfam PF00146 NADH dehydrogenase 17 322 7.0E-115 T 29-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01060 e01916b27c466b8a9d40dbe88b481452 331 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 29-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS05880 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Gene3D G3DSA:3.40.720.10 231 533 1.9E-22 T 29-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AM474_RS05880 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 7.6E-49 T 29-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 AM474_RS05880 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 Pfam PF00884 Sulfatase 240 529 2.6E-54 T 29-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 AM474_RS05880 b3b6c6041fb21e1f4e3c2ef2d9d3271f 551 SUPERFAMILY SSF53649 237 532 8.34E-20 T 29-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AM474_RS13065 61077d2bc66051e9472ef3edfe25bc99 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 7 154 1.2E-44 T 29-03-2018 IPR018729 Protein of unknown function DUF2269, transmembrane AM474_RS01070 50059b43a6a948912fea92a729cf202f 166 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 159 5.1E-33 T 29-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS19120 ed3364ff1cb3f49abc0f193d285cbe2b 120 Pfam PF04138 GtrA-like protein 5 119 2.6E-23 T 29-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AM474_RS20935 11e99d5f57718fca43a64d5e146be389 212 Gene3D G3DSA:3.90.1720.10 29 196 3.4E-12 T 29-03-2018 AM474_RS20935 11e99d5f57718fca43a64d5e146be389 212 Pfam PF06672 Protein of unknown function (DUF1175) 24 210 3.3E-77 T 29-03-2018 IPR009558 Protein of unknown function DUF1175 AM474_RS22850 419a6dbe0647294207db5eaf93dd90c3 161 SUPERFAMILY SSF54534 2 141 1.12E-36 T 29-03-2018 AM474_RS22850 419a6dbe0647294207db5eaf93dd90c3 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 8.8E-11 T 29-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM474_RS22850 419a6dbe0647294207db5eaf93dd90c3 161 Gene3D G3DSA:3.10.50.40 1 161 5.1E-28 T 29-03-2018 AM474_RS21780 3f480d2857afb1849dd80c82a45f86bf 140 Pfam PF13511 Domain of unknown function (DUF4124) 8 57 8.6E-15 T 29-03-2018 IPR025392 Domain of unknown function DUF4124 AM474_RS21780 3f480d2857afb1849dd80c82a45f86bf 140 Gene3D G3DSA:1.10.260.40 50 135 1.4E-4 T 29-03-2018 AM474_RS00235 45643a2114ad74ac2cb72d29d791aa7b 351 Pfam PF00419 Fimbrial protein 202 350 5.0E-12 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS00235 45643a2114ad74ac2cb72d29d791aa7b 351 Gene3D G3DSA:2.60.40.1090 209 351 1.2E-19 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS00235 45643a2114ad74ac2cb72d29d791aa7b 351 SUPERFAMILY SSF49401 211 351 3.63E-15 T 29-03-2018 IPR008966 Adhesion domain AM474_RS14365 2bee242c2b8e7b1f01adaaf34424e8fe 281 Gene3D G3DSA:1.25.40.10 18 154 1.0E-7 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS14365 2bee242c2b8e7b1f01adaaf34424e8fe 281 SUPERFAMILY SSF144059 23 278 4.32E-91 T 29-03-2018 AM474_RS14365 2bee242c2b8e7b1f01adaaf34424e8fe 281 Pfam PF07024 ImpE protein 159 274 6.4E-43 T 29-03-2018 IPR009211 Predicted virulence protein, SciE type AM474_RS14365 2bee242c2b8e7b1f01adaaf34424e8fe 281 PIRSF PIRSF029288 4 281 5.6E-103 T 29-03-2018 IPR009211 Predicted virulence protein, SciE type AM474_RS14365 2bee242c2b8e7b1f01adaaf34424e8fe 281 Pfam PF13428 Tetratricopeptide repeat 20 59 5.0E-5 T 29-03-2018 AM474_RS17385 8cf7d3fe73a7f0f9727189a028873483 467 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 29-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 AM474_RS17385 8cf7d3fe73a7f0f9727189a028873483 467 PIRSF PIRSF006060 1 459 7.6E-70 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS17385 8cf7d3fe73a7f0f9727189a028873483 467 Pfam PF00324 Amino acid permease 15 446 2.9E-101 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS08060 d35de896488ddacb67f3dbc233bc3225 611 Gene3D G3DSA:3.40.50.720 400 550 3.1E-7 T 29-03-2018 AM474_RS08060 d35de896488ddacb67f3dbc233bc3225 611 Pfam PF02254 TrkA-N domain 403 493 1.5E-5 T 29-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM474_RS08060 d35de896488ddacb67f3dbc233bc3225 611 Pfam PF00999 Sodium/hydrogen exchanger family 14 390 2.0E-36 T 29-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM474_RS08060 d35de896488ddacb67f3dbc233bc3225 611 SUPERFAMILY SSF51735 403 491 1.38E-7 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS10155 cedc4bf9ddb63ab6cd09b6db998591f9 154 Pfam PF03477 ATP cone domain 52 136 1.1E-13 T 29-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM474_RS10155 cedc4bf9ddb63ab6cd09b6db998591f9 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 90.616 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM474_RS10155 cedc4bf9ddb63ab6cd09b6db998591f9 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.2E-72 T 29-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM474_RS28195 33ecb8954749b45d8dd0cabee9409ad6 207 Gene3D G3DSA:1.20.1260.10 2 207 6.6E-71 T 29-03-2018 IPR012347 Ferritin-related AM474_RS28195 33ecb8954749b45d8dd0cabee9409ad6 207 SUPERFAMILY SSF47240 6 203 4.36E-76 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS28195 33ecb8954749b45d8dd0cabee9409ad6 207 PIRSF PIRSF020736 2 204 1.1E-90 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM474_RS28195 33ecb8954749b45d8dd0cabee9409ad6 207 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 57 199 1.0E-69 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM474_RS28195 33ecb8954749b45d8dd0cabee9409ad6 207 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 4 55 3.8E-18 T 29-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 AM474_RS20020 3c80fe55a0707af96854bf978817ee6c 318 PIRSF PIRSF037004 3 318 1.7E-124 T 29-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 AM474_RS20020 3c80fe55a0707af96854bf978817ee6c 318 Pfam PF08349 Protein of unknown function (DUF1722) 193 309 2.6E-41 T 29-03-2018 IPR013560 Domain of unknown function DUF1722 AM474_RS20020 3c80fe55a0707af96854bf978817ee6c 318 Pfam PF04463 Protein of unknown function (DUF523) 13 150 1.1E-33 T 29-03-2018 IPR007553 Domain of unknown function DUF523 AM474_RS25080 910a0e8132e54e023e39d2d96003e482 420 Gene3D G3DSA:3.30.559.10 15 241 1.2E-4 T 29-03-2018 AM474_RS25080 910a0e8132e54e023e39d2d96003e482 420 SUPERFAMILY SSF52777 50 207 4.89E-7 T 29-03-2018 AM474_RS04975 e221d7575a59a3b54165c9738ef89792 313 SUPERFAMILY SSF51735 1 310 1.09E-64 T 29-03-2018 IPR016040 NAD(P)-binding domain AM474_RS04975 e221d7575a59a3b54165c9738ef89792 313 Gene3D G3DSA:3.40.50.720 1 313 1.9E-51 T 29-03-2018 AM474_RS04975 e221d7575a59a3b54165c9738ef89792 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 219 1.7E-27 T 29-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM474_RS02340 14802725b198690bf5eb50a1b7716d50 87 Pfam PF08809 Phage related hypothetical protein (DUF1799) 3 78 5.7E-25 T 29-03-2018 IPR014915 Bacteriophage TLS, TfmB AM474_RS08525 979e4262fb4a676c212fb577496a656f 174 Gene3D G3DSA:1.10.10.10 84 140 0.0012 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS12960 632d52f2ed53aded45189386202d058c 461 TIGRFAM TIGR03173 pbuX: xanthine permease 33 452 4.0E-128 T 29-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 AM474_RS12960 632d52f2ed53aded45189386202d058c 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 448 1.3E-121 T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS12960 632d52f2ed53aded45189386202d058c 461 Pfam PF00860 Permease family 29 420 2.4E-94 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS12960 632d52f2ed53aded45189386202d058c 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 368 388 - T 29-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 AM474_RS03095 df07908d82582147928f2c1ea0eb819a 164 SUPERFAMILY SSF102712 58 141 5.75E-6 T 29-03-2018 AM474_RS03095 df07908d82582147928f2c1ea0eb819a 164 Gene3D G3DSA:3.40.140.10 41 164 2.8E-42 T 29-03-2018 AM474_RS03095 df07908d82582147928f2c1ea0eb819a 164 Pfam PF04002 RadC-like JAB domain 44 161 1.2E-39 T 29-03-2018 IPR025657 RadC-like JAB domain AM474_RS05780 d9652487295b5f88617cd24bfb97b397 271 Pfam PF13503 Domain of unknown function (DUF4123) 28 148 1.0E-18 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 AM474_RS25160 4fd0e0b6c1474c54a9dd1fc0269eba64 679 Pfam PF04632 Fusaric acid resistance protein family 24 664 2.8E-140 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS10015 92837a08d3c6f81630442e675a989dbc 221 Pfam PF09335 SNARE associated Golgi protein 47 172 2.4E-25 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS06505 e766a031d8b5f021a76cf60c0eb53172 456 Gene3D G3DSA:2.50.20.10 162 452 1.3E-55 T 29-03-2018 AM474_RS06505 e766a031d8b5f021a76cf60c0eb53172 456 Pfam PF07044 Protein of unknown function (DUF1329) 84 451 3.8E-153 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS28250 28982af7c21d7cea4b961a8c14ad9c2b 73 Gene3D G3DSA:3.40.50.2300 1 72 1.3E-4 T 29-03-2018 AM474_RS25555 39eb78c5e7bede4df3dde134ab513b25 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 86 4.7E-22 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM474_RS01145 a1a7f37d9e46fa6eb9fdec150a0d98c7 360 SUPERFAMILY SSF52151 160 323 1.41E-15 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS01145 a1a7f37d9e46fa6eb9fdec150a0d98c7 360 SUPERFAMILY SSF52151 48 106 1.41E-15 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS19665 4bdf48716dbf23b347b6be4f7d95030e 431 Pfam PF00860 Permease family 17 391 5.3E-54 T 29-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS19665 4bdf48716dbf23b347b6be4f7d95030e 431 PIRSF PIRSF005353 1 431 1.6E-180 T 29-03-2018 IPR026033 Purine permease PbuG-like AM474_RS16575 883823d30442419f30121cb07980e5f0 252 Pfam PF03741 Integral membrane protein TerC family 14 203 5.4E-51 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS31075 99e5dc6ca1d0668add1761584bfc47a7 452 Pfam PF04966 Carbohydrate-selective porin, OprB family 78 452 1.7E-119 T 29-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 AM474_RS14760 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Gene3D G3DSA:3.10.350.10 24 81 1.1E-14 T 29-03-2018 AM474_RS14760 e0adbf0c836c3cd09f6fb730e80ecdfb 341 Pfam PF01476 LysM domain 31 76 5.6E-13 T 29-03-2018 IPR018392 LysM domain AM474_RS14760 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SMART SM00257 30 78 0.0023 T 29-03-2018 IPR018392 LysM domain AM474_RS14760 e0adbf0c836c3cd09f6fb730e80ecdfb 341 SUPERFAMILY SSF54106 30 77 3.4E-7 T 29-03-2018 IPR018392 LysM domain AM474_RS27860 356f3a3dadef5372d1f3352c1605cc17 113 Gene3D G3DSA:3.30.70.970 2 107 7.7E-21 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM474_RS27860 356f3a3dadef5372d1f3352c1605cc17 113 Pfam PF06877 Regulator of ribonuclease activity B 9 104 7.5E-21 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM474_RS27860 356f3a3dadef5372d1f3352c1605cc17 113 SUPERFAMILY SSF89946 5 107 3.4E-23 T 29-03-2018 IPR009671 Regulator of ribonuclease activity B domain AM474_RS23980 ae84d85fc6cc71e33e7b837e7639b45a 416 Pfam PF03573 outer membrane porin, OprD family 23 414 4.3E-158 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS23980 ae84d85fc6cc71e33e7b837e7639b45a 416 Gene3D G3DSA:2.40.160.10 27 416 6.1E-119 T 29-03-2018 AM474_RS10745 4757a6f361ab9dd50e712ee52c182b50 462 SUPERFAMILY SSF50494 222 459 3.43E-34 T 29-03-2018 IPR009003 Peptidase S1, PA clan AM474_RS10745 4757a6f361ab9dd50e712ee52c182b50 462 Gene3D G3DSA:2.40.10.10 330 450 3.6E-17 T 29-03-2018 AM474_RS10745 4757a6f361ab9dd50e712ee52c182b50 462 Gene3D G3DSA:2.40.10.10 219 311 2.6E-8 T 29-03-2018 AM474_RS31610 b45c3d04391c369fbc49df0bd98237d3 179 PIRSF PIRSF029505 1 179 5.2E-97 T 29-03-2018 IPR016922 Uncharacterised conserved protein UCP029505 AM474_RS01405 20840bd263c9a6bb01631b8936d4a733 204 Pfam PF01810 LysE type translocator 15 203 1.8E-31 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS01405 20840bd263c9a6bb01631b8936d4a733 204 PIRSF PIRSF006324 1 204 1.8E-53 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS18035 59a4c5ccd0bdf673d21f1b01dc687407 324 Pfam PF01925 Sulfite exporter TauE/SafE 86 317 2.3E-36 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS04120 dbd1ae8ba85b261002113ed3b38f7e1e 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 187 7.4E-35 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS18570 851b83b8a963a3e45a0f7e81d702badb 311 SMART SM00460 192 262 2.9E-23 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS18570 851b83b8a963a3e45a0f7e81d702badb 311 SUPERFAMILY SSF54001 130 287 1.67E-45 T 29-03-2018 AM474_RS18570 851b83b8a963a3e45a0f7e81d702badb 311 Pfam PF01841 Transglutaminase-like superfamily 160 260 2.0E-22 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS18570 851b83b8a963a3e45a0f7e81d702badb 311 Gene3D G3DSA:3.90.260.10 179 267 6.3E-7 T 29-03-2018 IPR002931 Transglutaminase-like AM474_RS18570 851b83b8a963a3e45a0f7e81d702badb 311 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 16 95 1.8E-24 T 29-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AM474_RS15440 35d16456cca63b5a16e2060c2c15a56f 111 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 6 110 7.2E-40 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS15440 35d16456cca63b5a16e2060c2c15a56f 111 Pfam PF09498 Protein of unknown function (DUF2388) 41 110 3.1E-31 T 29-03-2018 IPR012661 Conserved hypothetical protein CHP02448 AM474_RS14165 29b659316d48f0a07f31a849e25df2ed 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 87 4.7E-8 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM474_RS06510 caff4a2d21f8b045f92dcef3bc61fb83 585 Pfam PF06980 Protein of unknown function (DUF1302) 31 585 1.1E-221 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS20585 1056722a625783884c1fff34c9016243 271 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 2.5E-4 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS20585 1056722a625783884c1fff34c9016243 271 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 5.8E-6 T 29-03-2018 IPR012902 Prokaryotic N-terminal methylation site AM474_RS09365 f9987e87aff1cee087800f2ef2eaac36 641 Pfam PF06980 Protein of unknown function (DUF1302) 31 641 4.7E-230 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS13125 410f9bf2233a05116e7552c3bee36813 464 Pfam PF00324 Amino acid permease 37 431 3.6E-35 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS13125 410f9bf2233a05116e7552c3bee36813 464 PIRSF PIRSF006060 17 453 1.2E-63 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS24145 73eb7f97c65cd71f1475c578c6df03ab 112 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 102 8.0E-26 T 29-03-2018 AM474_RS08180 367df82fe6933921e0dad04abc7439fe 105 Gene3D G3DSA:3.30.70.120 1 103 2.8E-43 T 29-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM474_RS08180 367df82fe6933921e0dad04abc7439fe 105 SUPERFAMILY SSF102705 2 101 5.1E-23 T 29-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AM474_RS04055 9fe1173620f5ba5a6d6471bd6409fe54 178 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.0E-18 T 29-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AM474_RS00380 db4a1adbe900fbbf553a6df6ff4bf7df 540 SUPERFAMILY SSF103473 23 406 2.22E-46 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS00380 db4a1adbe900fbbf553a6df6ff4bf7df 540 Gene3D G3DSA:1.20.1250.20 3 218 8.2E-24 T 29-03-2018 AM474_RS00380 db4a1adbe900fbbf553a6df6ff4bf7df 540 Gene3D G3DSA:1.20.1250.20 226 493 1.9E-15 T 29-03-2018 AM474_RS00380 db4a1adbe900fbbf553a6df6ff4bf7df 540 Pfam PF05977 Transmembrane secretion effector 17 521 1.7E-139 T 29-03-2018 IPR010290 Transmembrane secretion effector AM474_RS10655 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 171 1.3E-11 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS10655 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Gene3D G3DSA:2.40.170.20 181 694 3.7E-72 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS10655 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 SUPERFAMILY SSF56935 33 694 6.41E-107 T 29-03-2018 AM474_RS10655 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Pfam PF00593 TonB dependent receptor 262 690 9.6E-44 T 29-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AM474_RS10655 d45cf72b9d2ff04f11c84dd4cd0cc01d 694 Gene3D G3DSA:2.170.130.10 34 180 1.9E-21 T 29-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AM474_RS24760 0cd379dbf751f4f6c8c2ad8e93935c08 270 SUPERFAMILY SSF69572 3 254 1.07E-64 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM474_RS24760 0cd379dbf751f4f6c8c2ad8e93935c08 270 Gene3D G3DSA:3.40.50.720 1 262 2.6E-56 T 29-03-2018 AM474_RS24760 0cd379dbf751f4f6c8c2ad8e93935c08 270 Pfam PF00899 ThiF family 15 258 1.5E-42 T 29-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM474_RS03070 aa4a0126c417222b22380ffa7e48b802 305 Pfam PF11920 Protein of unknown function (DUF3438) 9 284 3.8E-125 T 29-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 AM474_RS03070 aa4a0126c417222b22380ffa7e48b802 305 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 275 2.2E-112 T 29-03-2018 IPR021844 Integrating conjugative element protein, PFL4704 AM474_RS31605 533981999e9f149a8b1405939f4dfd66 403 Pfam PF03929 PepSY-associated TM region 12 366 1.4E-62 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS15465 26b1993b965c3a2177d51038ea0e5c68 380 Pfam PF01757 Acyltransferase family 7 341 1.0E-25 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM474_RS03600 a1f364f02a756a38f507ced69a42393f 55 Pfam PF11446 Protein of unknown function (DUF2897) 1 52 2.0E-25 T 29-03-2018 IPR021550 Protein of unknown function DUF2897 AM474_RS23770 3dfde478c577e65ec0f5a4f059c3e107 687 SUPERFAMILY SSF52151 209 270 1.18E-28 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS23770 3dfde478c577e65ec0f5a4f059c3e107 687 SUPERFAMILY SSF52151 102 174 1.18E-28 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS23770 3dfde478c577e65ec0f5a4f059c3e107 687 SUPERFAMILY SSF52151 299 363 1.18E-28 T 29-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AM474_RS23770 3dfde478c577e65ec0f5a4f059c3e107 687 Pfam PF01734 Patatin-like phospholipase 107 356 1.4E-25 T 29-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM474_RS23770 3dfde478c577e65ec0f5a4f059c3e107 687 Gene3D G3DSA:3.40.1090.10 95 550 2.4E-35 T 29-03-2018 AM474_RS30600 392bd7b93b977f4396fde25461b7dc43 406 Pfam PF14236 Domain of unknown function (DUF4338) 46 338 3.8E-57 T 29-03-2018 IPR025639 Domain of unknown function DUF4338 AM474_RS20710 4f12dcc75b59e1c6990c246496cfe41c 229 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 4.3E-16 T 29-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 AM474_RS03915 a0b9c1a2c191360bc46e05d6096b326e 1248 Pfam PF02514 CobN/Magnesium Chelatase 138 1231 0.0 T 29-03-2018 IPR003672 CobN/magnesium chelatase GO:0009058 AM474_RS03915 a0b9c1a2c191360bc46e05d6096b326e 1248 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1246 0.0 T 29-03-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 AM474_RS27065 1e05b0a0a7df5f245ed74d485a36a262 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 59 6.0E-6 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM474_RS15315 5f178c4ee5b8cedaa0741692f4ecddb9 197 Pfam PF01914 MarC family integral membrane protein 4 192 1.7E-42 T 29-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AM474_RS30670 2686ad6ec966f97cded29593d1761463 242 SUPERFAMILY SSF47240 64 206 1.43E-7 T 29-03-2018 IPR009078 Ferritin-like superfamily AM474_RS30670 2686ad6ec966f97cded29593d1761463 242 Gene3D G3DSA:1.10.620.20 59 235 9.5E-7 T 29-03-2018 AM474_RS17810 e2f40bbcb475ef61a69ee2020b7965d1 191 Pfam PF11985 Protein of unknown function (DUF3486) 1 189 1.0E-38 T 29-03-2018 IPR021874 Bacteriophage Mu, Gp27 AM474_RS02145 4ab1c49aad8e69cdb7c669d232d2a4f4 132 PIRSF PIRSF029543 1 131 4.1E-58 T 29-03-2018 IPR016924 Uncharacterised conserved protein UCP029543 AM474_RS23395 c0182ab5c2ee0f629858947c01e7290b 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 179 1.8E-61 T 29-03-2018 IPR018636 Protein of unknown function DUF2058 AM474_RS01100 dee751ab12ff3237a918b9381da48564 352 Pfam PF01594 AI-2E family transporter 14 339 1.7E-52 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM474_RS21885 33ea4511201e6d19751dc4e3330e4aad 70 Pfam PF04964 Flp/Fap pilin component 15 64 1.0E-15 T 29-03-2018 IPR007047 Flp/Fap pilin component AM474_RS30465 41598c0241af74f337b454f111ed4656 552 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 177 202 - T 29-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 AM474_RS30465 41598c0241af74f337b454f111ed4656 552 Pfam PF00474 Sodium:solute symporter family 62 471 6.9E-103 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS30465 41598c0241af74f337b454f111ed4656 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 62 471 1.1E-58 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS24115 99c365a7383fe1a47372324d04c4ac28 452 Pfam PF02447 GntP family permease 1 450 1.2E-94 T 29-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 AM474_RS09250 334c85d17dcad695c7e92ad7d7bbcd81 131 Pfam PF05488 PAAR motif 2 52 2.2E-15 T 29-03-2018 IPR008727 PAAR motif AM474_RS08230 13b8d63cccf9104d92797641220f2084 425 Pfam PF03743 Bacterial conjugation TrbI-like protein 231 411 9.7E-59 T 29-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 Gene3D G3DSA:3.40.50.300 245 397 2.0E-15 T 29-03-2018 AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 Pfam PF00271 Helicase conserved C-terminal domain 263 356 7.0E-6 T 29-03-2018 IPR001650 Helicase, C-terminal AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 Pfam PF04851 Type III restriction enzyme, res subunit 4 78 1.2E-7 T 29-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 Gene3D G3DSA:3.40.50.300 2 169 1.3E-14 T 29-03-2018 AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 SUPERFAMILY SSF52540 25 159 1.07E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09640 e1c9ad605a4746a8491eaad5f3a84646 466 SUPERFAMILY SSF52540 230 361 1.07E-21 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS23055 914ac70c4c3f0f891661e8cf604e9600 731 Pfam PF04632 Fusaric acid resistance protein family 40 724 4.9E-210 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS06010 f3946c47bc0b549830893079bd879e30 250 Gene3D G3DSA:3.40.50.150 33 238 3.5E-13 T 29-03-2018 AM474_RS06010 f3946c47bc0b549830893079bd879e30 250 SUPERFAMILY SSF53335 15 225 3.23E-13 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS13830 5cd4d9faa630c6dd56ee00a9ef0bf075 293 Pfam PF03547 Membrane transport protein 149 287 3.8E-11 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM474_RS18730 6c3bbc1aa3aaf80329bd6a09d6778266 190 Pfam PF04955 HupE / UreJ protein 10 187 6.5E-61 T 29-03-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein AM474_RS18730 6c3bbc1aa3aaf80329bd6a09d6778266 190 PIRSF PIRSF016919 1 190 1.0E-63 T 29-03-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein AM474_RS23750 d41fc75d21549b9ee9d50821309c755c 57 Gene3D G3DSA:3.40.30.10 3 56 1.2E-5 T 29-03-2018 AM474_RS23750 d41fc75d21549b9ee9d50821309c755c 57 SUPERFAMILY SSF52833 8 51 1.69E-5 T 29-03-2018 IPR012336 Thioredoxin-like fold AM474_RS16265 22c5458aadee3af7232125a15bd2e5c5 439 Pfam PF01266 FAD dependent oxidoreductase 39 392 3.7E-57 T 29-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM474_RS16265 22c5458aadee3af7232125a15bd2e5c5 439 Gene3D G3DSA:3.50.50.60 28 409 6.0E-43 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16265 22c5458aadee3af7232125a15bd2e5c5 439 SUPERFAMILY SSF51905 354 431 2.17E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS16265 22c5458aadee3af7232125a15bd2e5c5 439 SUPERFAMILY SSF51905 38 262 2.17E-48 T 29-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 Pfam PF01478 Type IV leader peptidase family 137 245 1.8E-24 T 29-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 20 126 1.9E-33 T 29-03-2018 IPR010627 Peptidase A24A, N-terminal AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 240 1.5E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 202 212 1.5E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 145 162 1.5E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM474_RS20730 2e61a131381258f9a2636caad9665ed5 290 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 213 224 1.5E-26 T 29-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial AM474_RS02975 60632ebad190645bac99242e8f63d82a 257 Pfam PF06054 Competence protein CoiA-like family 38 152 1.2E-6 T 29-03-2018 IPR010330 Competence-induced protein CoiA-like AM474_RS02975 60632ebad190645bac99242e8f63d82a 257 Gene3D G3DSA:3.90.1570.10 92 170 4.2E-4 T 29-03-2018 AM474_RS29795 7496aa94aedffafcc1c87bec25edcfff 398 Gene3D G3DSA:1.20.1250.20 9 193 7.0E-22 T 29-03-2018 AM474_RS29795 7496aa94aedffafcc1c87bec25edcfff 398 SUPERFAMILY SSF103473 11 385 3.79E-55 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS29795 7496aa94aedffafcc1c87bec25edcfff 398 Pfam PF07690 Major Facilitator Superfamily 19 239 1.1E-23 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS29795 7496aa94aedffafcc1c87bec25edcfff 398 Gene3D G3DSA:1.20.1250.20 195 395 1.2E-20 T 29-03-2018 AM474_RS14725 1f2f3851cd6cf1fa590a647ad82dbccc 428 Gene3D G3DSA:3.10.50.40 282 412 6.5E-11 T 29-03-2018 AM474_RS14725 1f2f3851cd6cf1fa590a647ad82dbccc 428 Pfam PF13145 PPIC-type PPIASE domain 271 391 4.6E-7 T 29-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AM474_RS14725 1f2f3851cd6cf1fa590a647ad82dbccc 428 SUPERFAMILY SSF54534 292 383 3.79E-11 T 29-03-2018 AM474_RS14540 ac88d47a37b79db70646384c0b112013 142 Gene3D G3DSA:2.60.120.10 7 139 2.4E-10 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS14540 ac88d47a37b79db70646384c0b112013 142 SUPERFAMILY SSF51182 42 132 1.67E-11 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS19110 1e31530c146acd8610ea4571f215a813 122 Gene3D G3DSA:3.40.50.2300 31 122 5.3E-4 T 29-03-2018 AM474_RS12245 2fc952052b6bc085dc4e7543dbae6c97 106 PIRSF PIRSF034456 1 106 7.2E-54 T 29-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 AM474_RS12245 2fc952052b6bc085dc4e7543dbae6c97 106 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 23 101 1.1E-6 T 29-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein AM474_RS21830 ba44970b8a447ef582ef9f2dcb891600 124 Gene3D G3DSA:1.10.101.10 4 71 0.0017 T 29-03-2018 IPR002477 Peptidoglycan binding-like AM474_RS30510 42a450994dd9a0d417f9f6161d8763da 193 Gene3D G3DSA:1.10.357.10 5 190 1.3E-27 T 29-03-2018 AM474_RS30510 42a450994dd9a0d417f9f6161d8763da 193 SUPERFAMILY SSF46689 5 77 2.0E-15 T 29-03-2018 IPR009057 Homeobox domain-like GO:0003677 AM474_RS30510 42a450994dd9a0d417f9f6161d8763da 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.6E-10 T 29-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AM474_RS17880 4e2a4bd2a6616831a4f894ab8e5e1456 86 Gene3D G3DSA:1.20.5.10 18 66 1.2E-7 T 29-03-2018 AM474_RS16105 581da0fe7d6f55eb96fa6e446ac151a0 206 Pfam PF01810 LysE type translocator 15 203 7.0E-19 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS21730 255c87940e4ea8c1e7926da69a08adba 102 Gene3D G3DSA:1.10.3990.20 11 94 3.3E-30 T 29-03-2018 AM474_RS21730 255c87940e4ea8c1e7926da69a08adba 102 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.4E-24 T 29-03-2018 IPR027373 Ribbon-helix-helix domain AM474_RS01885 7cc1bb9b4584fc5c4a75e4868f050e6e 315 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 5 297 4.6E-93 T 29-03-2018 AM474_RS01885 7cc1bb9b4584fc5c4a75e4868f050e6e 315 PIRSF PIRSF015582 2 306 3.1E-44 T 29-03-2018 IPR011206 Citrate lyase beta subunit-like AM474_RS01885 7cc1bb9b4584fc5c4a75e4868f050e6e 315 Gene3D G3DSA:3.20.20.360 8 291 2.1E-30 T 29-03-2018 AM474_RS01885 7cc1bb9b4584fc5c4a75e4868f050e6e 315 SUPERFAMILY SSF51621 7 245 7.01E-27 T 29-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AM474_RS29240 ab45df705a6b534b13f96ce0b22ae178 23 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 2 22 4.4E-13 T 29-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM474_RS29240 ab45df705a6b534b13f96ce0b22ae178 23 Pfam PF08042 PqqA family 1 19 3.6E-11 T 29-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM474_RS29240 ab45df705a6b534b13f96ce0b22ae178 23 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 1 23 11.953 T 29-03-2018 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 AM474_RS19835 6e1294847227d0c22db0719b3fbdd0c6 235 Pfam PF04403 Paraquat-inducible protein A 74 225 5.1E-48 T 29-03-2018 IPR007498 Paraquat-inducible protein A AM474_RS10325 b07eac8379ab74f3ba9e07ad222a75c0 96 PIRSF PIRSF028291 1 96 4.0E-43 T 29-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 AM474_RS10325 b07eac8379ab74f3ba9e07ad222a75c0 96 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 1.5E-29 T 29-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 AM474_RS19715 84677f09729b6c809483ca6ce56edbf1 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 38 167 1.9E-42 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM474_RS19715 84677f09729b6c809483ca6ce56edbf1 354 Pfam PF05171 Haemin-degrading HemS.ChuX domain 220 351 1.5E-42 T 29-03-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 AM474_RS19715 84677f09729b6c809483ca6ce56edbf1 354 Gene3D G3DSA:3.40.1570.10 1 182 7.5E-57 T 29-03-2018 AM474_RS19715 84677f09729b6c809483ca6ce56edbf1 354 Gene3D G3DSA:3.40.1570.10 183 353 7.2E-53 T 29-03-2018 AM474_RS19715 84677f09729b6c809483ca6ce56edbf1 354 SUPERFAMILY SSF144064 14 351 7.06E-127 T 29-03-2018 AM474_RS21655 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 1.0E-29 T 29-03-2018 AM474_RS21655 ebe5f2f352ba7414878cfdc38dd2a3e0 251 Gene3D G3DSA:3.40.630.30 16 179 2.3E-29 T 29-03-2018 AM474_RS21655 ebe5f2f352ba7414878cfdc38dd2a3e0 251 SUPERFAMILY SSF55729 23 223 3.55E-38 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS01030 6ab86feb224a51179bda043ce2ef2b5a 137 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 1.0E-33 T 29-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM474_RS01030 6ab86feb224a51179bda043ce2ef2b5a 137 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 20.119 T 29-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM474_RS24250 5baf72afb6e4d865afd17f72a3ce4db3 105 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 3.7E-31 T 29-03-2018 IPR018741 Protein of unknown function DUF2288 AM474_RS08555 1ccba27648a49e7eb0e2745bb5baf816 298 Pfam PF13557 Putative MetA-pathway of phenol degradation 68 294 1.4E-28 T 29-03-2018 IPR025737 MetA-pathway of phenol degradation, putative AM474_RS28095 3b9635f74e70703d4338465b66d96288 336 SUPERFAMILY SSF53474 49 313 4.41E-35 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS28095 3b9635f74e70703d4338465b66d96288 336 Pfam PF12697 Alpha/beta hydrolase family 58 265 3.8E-12 T 29-03-2018 IPR000073 Alpha/beta hydrolase fold-1 AM474_RS28095 3b9635f74e70703d4338465b66d96288 336 Gene3D G3DSA:3.40.50.1820 24 314 1.8E-30 T 29-03-2018 IPR029058 Alpha/Beta hydrolase fold AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 41 131 1.8E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 516 602 3.8E-10 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 280 369 2.5E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 395 463 2.0E-8 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 631 691 2.8E-7 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS19845 40fa80fad2b7719892af581b1c657dce 768 Pfam PF02470 MlaD protein 156 216 4.7E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS10315 ea0e0d92f7b6b060466c05eb90718c9d 461 SUPERFAMILY SSF53383 45 455 1.22E-77 T 29-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM474_RS10315 ea0e0d92f7b6b060466c05eb90718c9d 461 Gene3D G3DSA:3.90.1150.10 18 175 5.8E-23 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS10315 ea0e0d92f7b6b060466c05eb90718c9d 461 Gene3D G3DSA:3.40.640.10 187 336 3.6E-33 T 29-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AM474_RS10315 ea0e0d92f7b6b060466c05eb90718c9d 461 Pfam PF00202 Aminotransferase class-III 53 435 7.4E-41 T 29-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM474_RS10315 ea0e0d92f7b6b060466c05eb90718c9d 461 Gene3D G3DSA:3.90.1150.10 337 455 0.033 T 29-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 AM474_RS14225 e5f157e0e38dabc0df4c0865d7a8e83c 357 Pfam PF02628 Cytochrome oxidase assembly protein 13 320 1.3E-82 T 29-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AM474_RS20065 1dbc062306d76f2cf4b1cc8e4bc2edcd 177 Pfam PF05229 Spore Coat Protein U domain 30 174 3.4E-35 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS20065 1dbc062306d76f2cf4b1cc8e4bc2edcd 177 SMART SM00972 119 174 1.4E-20 T 29-03-2018 IPR007893 Spore coat protein U AM474_RS02410 81be589c095da003bb39c8d50f2bda0e 198 Pfam PF03592 Terminase small subunit 3 152 5.6E-37 T 29-03-2018 IPR005335 Terminase small subunit GO:0006323 AM474_RS01160 4499c90866897447dfa22db45822a22e 397 Pfam PF05940 NnrS protein 14 391 1.2E-112 T 29-03-2018 IPR010266 NnrS AM474_RS20955 270580b789722b01220fc646a97333d6 128 SUPERFAMILY SSF69118 5 119 2.09E-39 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS20955 270580b789722b01220fc646a97333d6 128 Gene3D G3DSA:1.20.1290.10 7 128 3.1E-38 T 29-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 AM474_RS20955 270580b789722b01220fc646a97333d6 128 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 1.9E-26 T 29-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AM474_RS28480 a1641407c7ef435de3302e2e9f42f368 75 Pfam PF11174 Protein of unknown function (DUF2970) 15 70 3.3E-25 T 29-03-2018 IPR021344 Protein of unknown function DUF2970 AM474_RS11595 88ab17f73e1471c92999ea5a57ca2d9d 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 3.5E-19 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS11595 88ab17f73e1471c92999ea5a57ca2d9d 276 Gene3D G3DSA:1.10.3720.10 12 272 1.5E-44 T 29-03-2018 AM474_RS11595 88ab17f73e1471c92999ea5a57ca2d9d 276 SUPERFAMILY SSF161098 11 267 3.08E-59 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 280 369 4.2E-12 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 42 131 4.5E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 516 602 8.6E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 631 691 2.8E-7 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 395 463 2.0E-8 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS30420 cd063dbddac6b35083e9330f9d0e8ebf 767 Pfam PF02470 MlaD protein 156 216 4.7E-11 T 29-03-2018 IPR003399 Mce/MlaD AM474_RS08020 8f0ac94ed20d50befe2c1515afc2228c 206 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 66 202 1.7E-50 T 29-03-2018 IPR019231 Protein of unknown function DUF2170 AM474_RS18480 b818a2934907aa071f6e4c7c519b75b1 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 3.1E-21 T 29-03-2018 IPR019201 Protein of unknown function DUF2065 AM474_RS25165 ad202a13b7f4bbfe5dff5e53bee15fc7 85 Pfam PF10976 Protein of unknown function (DUF2790) 11 83 3.1E-25 T 29-03-2018 IPR021245 Protein of unknown function DUF2790 AM474_RS09940 b2e206ea47d3d70851130c44b908f974 120 Pfam PF03788 LrgA family 13 106 1.5E-20 T 29-03-2018 IPR005538 LrgA/CidA family GO:0016021 AM474_RS21550 4782a3d3b48ab8160ead0ec53b9f56fb 446 Pfam PF09375 Imelysin 67 423 3.9E-97 T 29-03-2018 IPR018976 Peptidase M75, Imelysin AM474_RS16530 323044fd43f23fa1fa7cbb9643d6448b 376 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 31 358 1.6E-97 T 29-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AM474_RS24790 31c3d0625777b2d69e964f1b2c23b2e7 244 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 13 187 2.6E-70 T 29-03-2018 IPR022301 Integral membrane protein YjbE AM474_RS24790 31c3d0625777b2d69e964f1b2c23b2e7 244 Pfam PF03741 Integral membrane protein TerC family 16 186 4.2E-44 T 29-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM474_RS12545 2762f8e58a7d5a683618e206c434d29d 184 Pfam PF13328 HD domain 17 164 4.7E-10 T 29-03-2018 IPR003607 HD/PDEase domain AM474_RS12545 2762f8e58a7d5a683618e206c434d29d 184 SUPERFAMILY SSF109604 4 164 2.89E-31 T 29-03-2018 AM474_RS02300 0d5b9d6ba4213bd117887a66936f19c9 203 Pfam PF06805 Bacteriophage lambda tail assembly protein I 10 91 8.7E-7 T 29-03-2018 IPR010654 Bacteriophage lambda tail assembly I AM474_RS22265 8101937243b14fcc9664b551ec1b7a7c 97 Pfam PF11006 Protein of unknown function (DUF2845) 20 93 1.0E-16 T 29-03-2018 IPR021268 Protein of unknown function DUF2845 AM474_RS22265 8101937243b14fcc9664b551ec1b7a7c 97 Gene3D G3DSA:3.30.1450.10 25 97 9.1E-5 T 29-03-2018 AM474_RS14385 18b7d98123284591f70b2f039e1a9cb3 344 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 340 6.6E-99 T 29-03-2018 IPR017740 Type VI secretion system-associated, ImpA AM474_RS14385 18b7d98123284591f70b2f039e1a9cb3 344 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 131 6.1E-34 T 29-03-2018 IPR010657 ImpA, N-terminal AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 Gene3D G3DSA:3.30.1370.30 1 66 1.0E-25 T 29-03-2018 AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 SUPERFAMILY SSF56047 2 130 5.49E-47 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 Pfam PF00410 Ribosomal protein S8 5 130 5.7E-50 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 Gene3D G3DSA:3.30.1490.10 74 129 9.1E-20 T 29-03-2018 AM474_RS11100 be05b762ee7fa34563a966f2d88fc537 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.877 T 29-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474_RS30170 c59a8347a5674da3118e7b1f3702d1a1 121 Pfam PF12021 Protein of unknown function (DUF3509) 11 79 1.2E-14 T 29-03-2018 IPR021898 Protein of unknown function DUF3509 AM474_RS09645 f10ff61daae5379912b7bbe7d4398db0 192 Gene3D G3DSA:1.10.10.10 7 90 6.2E-4 T 29-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain AM474_RS15195 061a84ba26354370d111ef6d5685f608 449 Pfam PF00324 Amino acid permease 32 407 2.9E-33 T 29-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 AM474_RS15195 061a84ba26354370d111ef6d5685f608 449 PIRSF PIRSF006060 1 449 7.6E-68 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS19050 571e0428d021f2c6731edbb05e75cb0f 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 1.7E-63 T 29-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 AM474_RS19050 571e0428d021f2c6731edbb05e75cb0f 205 Pfam PF03006 Haemolysin-III related 2 197 5.1E-45 T 29-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AM474_RS23725 4439162890a9836d281542549f0fe818 312 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 26 310 4.9E-131 T 29-03-2018 IPR026331 Integrating conjugative element protein PFL_4710 AM474_RS23725 4439162890a9836d281542549f0fe818 312 Pfam PF06834 TraU protein 33 300 8.8E-67 T 29-03-2018 IPR009649 TraU AM474_RS24420 ca19b29caf0fb80839a4377e0c1ffa8f 268 Pfam PF02108 Flagellar assembly protein FliH 112 234 5.6E-34 T 29-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE AM474_RS24420 ca19b29caf0fb80839a4377e0c1ffa8f 268 SUPERFAMILY SSF160527 141 240 1.11E-7 T 29-03-2018 AM474_RS06050 e1eeeb61e33c9fed6abc53f4fe98921c 338 Pfam PF10974 Protein of unknown function (DUF2804) 8 337 8.4E-81 T 29-03-2018 IPR021243 Protein of unknown function DUF2804 AM474_RS00845 68ea130a8f5507963e07712d83ca327b 201 Gene3D G3DSA:2.60.120.10 46 188 8.7E-29 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS00845 68ea130a8f5507963e07712d83ca327b 201 Pfam PF05995 Cysteine dioxygenase type I 45 160 7.6E-8 T 29-03-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 AM474_RS00845 68ea130a8f5507963e07712d83ca327b 201 Gene3D G3DSA:1.20.5.440 5 45 6.4E-14 T 29-03-2018 AM474_RS00845 68ea130a8f5507963e07712d83ca327b 201 SUPERFAMILY SSF51182 9 196 2.44E-54 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS28660 ac28beca9b3cd1f5eb5fea0951414d25 263 Pfam PF12787 EcsC protein family 8 243 1.3E-39 T 29-03-2018 IPR024787 EcsC protein AM474_RS02540 c6c272fc9a4bb2e79b2d8cbdd6348bdc 97 Pfam PF03374 Phage antirepressor protein KilAC domain 4 80 5.4E-8 T 29-03-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 AM474_RS02540 c6c272fc9a4bb2e79b2d8cbdd6348bdc 97 Gene3D G3DSA:1.10.10.60 5 34 0.0021 T 29-03-2018 AM474_RS20580 6bdbe93712f766458f8e9cd153a4d0cf 201 Pfam PF14341 PilX N-terminal 10 60 1.1E-8 T 29-03-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain AM474_RS30865 18e834960c7c3c5c690f9fea0b329137 272 Gene3D G3DSA:1.10.260.40 1 69 2.6E-5 T 29-03-2018 AM474_RS13850 730f63600ce2a782e616fe0f9052078e 279 SMART SM00382 42 223 2.6E-15 T 29-03-2018 IPR003593 AAA+ ATPase domain AM474_RS13850 730f63600ce2a782e616fe0f9052078e 279 Gene3D G3DSA:3.40.50.300 10 250 2.8E-61 T 29-03-2018 AM474_RS13850 730f63600ce2a782e616fe0f9052078e 279 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 29-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM474_RS13850 730f63600ce2a782e616fe0f9052078e 279 SUPERFAMILY SSF52540 14 253 9.09E-69 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS13850 730f63600ce2a782e616fe0f9052078e 279 Pfam PF00005 ABC transporter 34 172 1.6E-31 T 29-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM474_RS19335 3f188727c2e7eeaa105dbea3f227d13e 188 Pfam PF06042 Nucleotidyltransferase 28 179 1.5E-50 T 29-03-2018 IPR009267 Putative nucleotidyltransferase AM474_RS12120 02423319e9c42261a2faa503be21927e 174 Gene3D G3DSA:3.30.70.920 59 162 1.3E-15 T 29-03-2018 AM474_RS23235 c3216444e4e7f5dc5ea9b9d34a9a100b 124 Pfam PF16931 Putative phage holin 1 120 3.2E-35 T 29-03-2018 IPR032637 Putative phage holin-like AM474_RS12525 7aaaa2cd5611d896d94bc5e5a460816d 492 Pfam PF03929 PepSY-associated TM region 8 277 6.2E-12 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS16510 09b02508b4446bef68a4bc20fbbd606d 358 Pfam PF06580 Histidine kinase 163 241 6.1E-23 T 29-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AM474_RS03125 7223442e49c2da1f48a8ba6ba0daa266 125 Pfam PF12553 Protein of unknown function (DUF3742) 1 121 7.5E-49 T 29-03-2018 IPR022213 Protein of unknown function DUF3742 AM474_RS22930 5867aa4768dfdf5678d7c15ca93377ab 207 Gene3D G3DSA:3.40.50.360 18 207 1.6E-34 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS22930 5867aa4768dfdf5678d7c15ca93377ab 207 SUPERFAMILY SSF52218 17 207 2.1E-43 T 29-03-2018 IPR029039 Flavoprotein-like domain AM474_RS22930 5867aa4768dfdf5678d7c15ca93377ab 207 Pfam PF02525 Flavodoxin-like fold 17 202 6.3E-31 T 29-03-2018 IPR003680 Flavodoxin-like fold AM474_RS09190 1c8b8c572e145ac1462cff449bca48c4 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 1.1E-22 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM474_RS31970 220903f3b3656528e8d752ed4d615746 382 Pfam PF03929 PepSY-associated TM region 8 373 2.7E-56 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS21560 5ae797c768c1ee30ab21b44af071c188 300 Pfam PF12483 E3 Ubiquitin ligase 83 183 1.5E-9 T 29-03-2018 IPR022170 E3 Ubiquitin ligase, GIDE-type GO:0004842|GO:0006996|GO:0016567 Reactome: R-HSA-5689880 AM474_RS21560 5ae797c768c1ee30ab21b44af071c188 300 ProSitePatterns PS00018 EF-hand calcium-binding domain. 212 224 - T 29-03-2018 IPR018247 EF-Hand 1, calcium-binding site AM474_RS20235 f8c02ae88c6053243d7f5bfc4e185fbc 323 Gene3D G3DSA:3.40.50.720 164 310 6.9E-5 T 29-03-2018 AM474_RS20235 f8c02ae88c6053243d7f5bfc4e185fbc 323 Pfam PF02625 XdhC and CoxI family 19 69 1.3E-14 T 29-03-2018 IPR003777 XdhC- CoxI AM474_RS20235 f8c02ae88c6053243d7f5bfc4e185fbc 323 Pfam PF13478 XdhC Rossmann domain 169 311 7.5E-35 T 29-03-2018 IPR027051 XdhC Rossmann domain AM474_RS13020 ae9ccc4ae63f18c6ecea1ab93637eb4b 267 Pfam PF01925 Sulfite exporter TauE/SafE 7 257 7.0E-57 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS27200 1440e71d334cc287f17fffc6e3228eb5 344 Pfam PF04909 Amidohydrolase 32 334 1.2E-11 T 29-03-2018 IPR006680 Amidohydrolase-related GO:0016787 AM474_RS27200 1440e71d334cc287f17fffc6e3228eb5 344 Gene3D G3DSA:3.20.20.140 20 342 6.5E-30 T 29-03-2018 AM474_RS27200 1440e71d334cc287f17fffc6e3228eb5 344 SUPERFAMILY SSF51556 32 334 1.53E-23 T 29-03-2018 IPR032466 Metal-dependent hydrolase AM474_RS09290 9b6a5adf08ee976621696c6c132d2925 296 Pfam PF01136 Peptidase family U32 83 264 1.5E-11 T 29-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 Gene3D G3DSA:3.40.50.2300 279 370 3.9E-6 T 29-03-2018 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 1.1E-23 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 1.1E-23 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 296 1.1E-23 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 1.1E-23 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 334 349 1.1E-23 T 29-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 Pfam PF13458 Periplasmic binding protein 29 368 4.0E-65 T 29-03-2018 IPR028081 Leucine-binding protein domain AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 SUPERFAMILY SSF53822 28 371 6.85E-92 T 29-03-2018 IPR028082 Periplasmic binding protein-like I AM474_RS18635 be73e839cc9dc7b761b431c769ff6710 374 Gene3D G3DSA:3.40.50.2300 23 246 6.7E-53 T 29-03-2018 AM474_RS00520 f07791b378dd307aee311de04f25d4c4 372 Gene3D G3DSA:2.130.10.10 40 356 7.0E-31 T 29-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AM474_RS00520 f07791b378dd307aee311de04f25d4c4 372 Pfam PF14870 Photosynthesis system II assembly factor YCF48 49 131 2.0E-10 T 29-03-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AM474_RS00520 f07791b378dd307aee311de04f25d4c4 372 SUPERFAMILY SSF110296 67 140 4.71E-35 T 29-03-2018 AM474_RS00520 f07791b378dd307aee311de04f25d4c4 372 SUPERFAMILY SSF110296 179 325 4.71E-35 T 29-03-2018 AM474_RS24905 998fc5eb69494ae06d2980f2aec1d483 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 3.7E-19 T 29-03-2018 IPR009241 Toxin HigB-like AM474_RS08270 7956472f60e6dbecb2b56d29b86aabdb 127 Pfam PF04956 TrbC/VIRB2 family 31 117 6.2E-25 T 29-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM474_RS15170 6a354c0665ee637a9396e78cba42eb9c 166 Pfam PF11743 Protein of unknown function (DUF3301) 38 131 4.1E-34 T 29-03-2018 IPR021732 Protein of unknown function DUF3301 AM474_RS02430 2ddbdf1d4b6a333b1919d052ef3653ce 94 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 92 9.4E-19 T 29-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 AM474_RS15470 2f2f38f81fd48165bd559215b979e267 287 Gene3D G3DSA:3.40.50.150 28 270 1.1E-23 T 29-03-2018 AM474_RS15470 2f2f38f81fd48165bd559215b979e267 287 SUPERFAMILY SSF53335 44 217 4.45E-29 T 29-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM474_RS15470 2f2f38f81fd48165bd559215b979e267 287 Pfam PF13489 Methyltransferase domain 51 198 2.0E-15 T 29-03-2018 AM474_RS21715 9d74211b1aa4e2eaa5e99c99259fbce8 426 Pfam PF01757 Acyltransferase family 12 397 2.6E-30 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM474_RS25930 56da316267f6b0ca261c3a7ab8601d97 63 SUPERFAMILY SSF53901 8 49 6.14E-6 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS25930 56da316267f6b0ca261c3a7ab8601d97 63 Gene3D G3DSA:3.40.47.10 1 62 2.3E-7 T 29-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 AM474_RS04170 00e405631ec38beed33f9db88fcb8154 75 Pfam PF04400 (Na+)-NQR maturation NqrM 21 59 4.8E-14 T 29-03-2018 IPR007495 (Na+)-NQR maturation factor NqrM AM474_RS26525 5df456406e19922cafd004588e1735fa 155 Pfam PF03918 Cytochrome C biogenesis protein 9 151 8.2E-57 T 29-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM474_RS03450 6b3104a55923c31461135cf023b7d039 83 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 24 83 3.9E-11 T 29-03-2018 IPR021793 Major outer membrane lipoprotein Oprl AM474_RS17120 c7e3e1f841453061768dd50d140ec9f5 750 Pfam PF05170 AsmA family 1 635 8.7E-190 T 29-03-2018 IPR007844 AsmA AM474_RS07730 55910d155b5e7f8354db6aaf1e1dff17 132 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 25 118 2.3E-33 T 29-03-2018 AM474_RS11575 072571981561bdfe42b557239340efbd 104 Pfam PF11112 Pyocin activator protein PrtN 16 89 5.5E-29 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS11575 072571981561bdfe42b557239340efbd 104 ProDom PD069311 TRANSCRIPTIONAL ACTIVATOR PRTN TRANSCRIPTION PYOCIN BIOSYNTHESIS DNA-BINDING BACTERIOCIN REGULATOR REGULATOR 12 97 8.0E-46 T 29-03-2018 IPR020518 Transcription regulator PrtN GO:0006355 AM474_RS31555 27faddb95b7ab6af4b1cd6447724d9a1 548 Gene3D G3DSA:1.10.1280.10 311 469 3.2E-4 T 29-03-2018 IPR008922 Uncharacterised domain, di-copper centre Reactome: R-HSA-5662702 AM474_RS31555 27faddb95b7ab6af4b1cd6447724d9a1 548 SUPERFAMILY SSF48056 254 448 1.01E-7 T 29-03-2018 IPR008922 Uncharacterised domain, di-copper centre Reactome: R-HSA-5662702 AM474_RS31555 27faddb95b7ab6af4b1cd6447724d9a1 548 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 21 5.5E-4 T 29-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AM474_RS22090 eeb7c303bdf47e5b311d2993e811c919 143 Pfam PF11356 Type II secretion system protein C 55 124 5.9E-8 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal AM474_RS04225 4d89014ade63d70a82821ddd1c14d664 209 Pfam PF10972 Peptidoglycan-binding protein, CsiV 61 173 4.8E-19 T 29-03-2018 IPR021241 Peptidoglycan-binding protein, CsiV AM474_RS05935 640eed6cdc2b5172633faca0eef3aa34 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 144 5.0E-36 T 29-03-2018 IPR006750 Putative inner membrane exporter, YdcZ AM474_RS26810 f56de7c99a0520cb6f438067a40a8eb0 179 Pfam PF03691 Uncharacterised protein family (UPF0167) 5 178 2.9E-61 T 29-03-2018 IPR005363 Uncharacterised protein family UPF0167 AM474_RS22385 a1a951f786b03c5342ef2d6633c3fcaa 273 Pfam PF04294 VanW like protein 70 203 2.8E-33 T 29-03-2018 IPR007391 Vancomycin resistance VanW AM474_RS10305 323fa00c8898fda8445899922b254784 189 SUPERFAMILY SSF49401 33 189 2.49E-18 T 29-03-2018 IPR008966 Adhesion domain AM474_RS10305 323fa00c8898fda8445899922b254784 189 Gene3D G3DSA:2.60.40.1090 31 189 6.4E-24 T 29-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 AM474_RS28895 e19254abe2c9a32976220e9ec8106a7c 115 Gene3D G3DSA:2.60.120.10 15 115 4.7E-13 T 29-03-2018 IPR014710 RmlC-like jelly roll fold AM474_RS28895 e19254abe2c9a32976220e9ec8106a7c 115 SUPERFAMILY SSF51182 29 113 8.19E-16 T 29-03-2018 IPR011051 RmlC-like cupin domain AM474_RS28895 e19254abe2c9a32976220e9ec8106a7c 115 Pfam PF05899 Protein of unknown function (DUF861) 41 111 1.6E-26 T 29-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 AM474_RS30460 62552b04bbe8af343a01f10032d3ee4b 107 Pfam PF04341 Protein of unknown function, DUF485 11 98 1.6E-25 T 29-03-2018 IPR007436 Protein of unknown function DUF485 AM474_RS14325 81c2cfac1ef8fd167ecaba0406bf2eb5 460 Gene3D G3DSA:3.30.460.10 264 388 1.3E-4 T 29-03-2018 AM474_RS14325 81c2cfac1ef8fd167ecaba0406bf2eb5 460 Pfam PF05488 PAAR motif 80 151 1.9E-12 T 29-03-2018 IPR008727 PAAR motif AM474_RS30265 96c51431097f76425604a2919bb27d97 140 Pfam PF04120 Low affinity iron permease 3 125 4.9E-50 T 29-03-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 AM474_RS02400 294326392393d0072ee4d9150a2e350c 451 Pfam PF13264 Domain of unknown function (DUF4055) 245 375 3.9E-37 T 29-03-2018 IPR025129 Domain of unknown function DUF4055 AM474_RS28005 9458c00a2bac86619f14d1669748c15a 115 Gene3D G3DSA:3.40.30.10 5 97 6.8E-4 T 29-03-2018 AM474_RS03040 bc707b393ce5667e01c90ad526b2b179 300 Pfam PF14253 Bacteriophage abortive infection AbiH 6 267 1.6E-49 T 29-03-2018 IPR025935 Bacteriophage abortive infection AbiH AM474_RS12535 c59d9544492c487577373085fcf02b9b 144 Pfam PF11162 Protein of unknown function (DUF2946) 24 143 1.1E-8 T 29-03-2018 IPR021333 Protein of unknown function DUF2946 AM474_RS09395 0f2253651cc56a3c5aa4a9736319cb7f 56 Pfam PF10617 Protein of unknown function (DUF2474) 16 52 2.5E-18 T 29-03-2018 IPR018895 Protein of unknown function DUF2474 AM474_RS22880 992c7eff2adaafd5f78e142dccfb6f47 207 TIGRFAM TIGR03398 plc_access_R: phospholipase C accessory protein PlcR 66 205 3.6E-62 T 29-03-2018 IPR017769 Phospholipase C accessory protein PlcR AM474_RS26865 a02468acfd347f7a99e66d50ff7da8c8 227 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 212 1.2E-55 T 29-03-2018 AM474_RS31800 11e5e00f160316dc54f27cb0e0489df3 323 Gene3D G3DSA:3.20.20.370 16 302 2.0E-9 T 29-03-2018 AM474_RS31800 11e5e00f160316dc54f27cb0e0489df3 323 Pfam PF01522 Polysaccharide deacetylase 83 241 3.2E-5 T 29-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM474_RS31800 11e5e00f160316dc54f27cb0e0489df3 323 SUPERFAMILY SSF88713 200 299 2.22E-6 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS31800 11e5e00f160316dc54f27cb0e0489df3 323 SUPERFAMILY SSF88713 55 120 2.22E-6 T 29-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM474_RS28930 d3ca3955d8e0d94d624eb4926adaa2e4 1281 Pfam PF02514 CobN/Magnesium Chelatase 124 1177 5.1E-289 T 29-03-2018 IPR003672 CobN/magnesium chelatase GO:0009058 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 Pfam PF01578 Cytochrome C assembly protein 15 186 6.3E-26 T 29-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 64 84 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 102 122 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 47 64 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 158 184 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 206 230 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 123 143 4.7E-59 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS26500 eeb96d3f356537d13c0c0e1e57cdaab9 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 47 230 2.1E-84 T 29-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM474_RS08595 3cc745ad65e6bbc9487e6024ae55b49a 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 145 3.9E-24 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM474_RS17715 bd6a2b429f7d6ea033b030b0f672efdf 273 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 14 159 1.5E-9 T 29-03-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal AM474_RS17715 bd6a2b429f7d6ea033b030b0f672efdf 273 Pfam PF09356 Phage conserved hypothetical protein BR0599 188 264 1.3E-15 T 29-03-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal AM474_RS17715 bd6a2b429f7d6ea033b030b0f672efdf 273 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 19 271 2.1E-96 T 29-03-2018 IPR011928 Bacteriophage phiJL001, Gp84 AM474_RS20765 2ff6484f0920d38191bbadfca9d581e0 751 Pfam PF07793 Protein of unknown function (DUF1631) 24 745 1.1E-253 T 29-03-2018 IPR012434 Protein of unknown function DUF1631 AM474_RS05765 f05671992e0b471d23c54b6f64f61866 183 Pfam PF11745 Protein of unknown function (DUF3304) 28 154 4.2E-38 T 29-03-2018 IPR021733 Protein of unknown function DUF3304 AM474_RS20685 7d5954ee95faf60c6e93791c24435f47 56 Pfam PF11293 Protein of unknown function (DUF3094) 2 56 1.6E-35 T 29-03-2018 IPR021444 Protein of unknown function DUF3094 AM474_RS03415 79180de09ce3731fcb434ffa0e1b8c7f 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 243 1.8E-46 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS28735 d41589ebb090d3ad435fe74fa98eb64c 222 Gene3D G3DSA:1.20.90.10 17 128 1.0E-7 T 29-03-2018 IPR016090 Phospholipase A2 domain GO:0004623|GO:0006644|GO:0050482 KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 AM474_RS17835 fead05bdc6eb4eea1bb96d49fc289fa3 209 SUPERFAMILY SSF53955 36 202 6.33E-35 T 29-03-2018 IPR023346 Lysozyme-like domain AM474_RS17835 fead05bdc6eb4eea1bb96d49fc289fa3 209 Gene3D G3DSA:1.10.530.10 19 194 2.1E-27 T 29-03-2018 AM474_RS17835 fead05bdc6eb4eea1bb96d49fc289fa3 209 Pfam PF01464 Transglycosylase SLT domain 47 154 1.3E-13 T 29-03-2018 IPR008258 Transglycosylase SLT domain 1 AM474_RS10765 a93549770dc5a083d1fa4eccbe9eebcd 431 Gene3D G3DSA:2.40.160.10 12 431 3.1E-110 T 29-03-2018 AM474_RS10765 a93549770dc5a083d1fa4eccbe9eebcd 431 Pfam PF03573 outer membrane porin, OprD family 32 429 1.3E-142 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS21915 f3778d931b71521c7932581762bbcd87 303 Pfam PF00482 Type II secretion system (T2SS), protein F 159 287 3.1E-15 T 29-03-2018 IPR018076 Type II secretion system F domain AM474_RS08835 46be6a82f500b616cbea6f55cb3623c4 165 Pfam PF06271 RDD family 14 151 1.1E-28 T 29-03-2018 IPR010432 RDD AM474_RS16580 62baf695bdfc83589bcac5dee3e38736 209 PIRSF PIRSF006324 1 206 1.6E-51 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS16580 62baf695bdfc83589bcac5dee3e38736 209 Pfam PF01810 LysE type translocator 16 203 7.9E-33 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 AM474_RS05810 10f80bfd38a3f6aa7ed49976ae6fcca4 69 Pfam PF09720 Putative addiction module component 15 62 1.9E-6 T 29-03-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module AM474_RS10460 36c510aff6d48141ff5522c2717c566c 189 SUPERFAMILY SSF52096 34 186 1.79E-10 T 29-03-2018 IPR029045 ClpP/crotonase-like domain AM474_RS26370 efaf3167b2935cf35e5438a75ed66ad5 419 Pfam PF04536 TPM domain 45 168 7.5E-38 T 29-03-2018 IPR007621 TPM domain AM474_RS00530 ad02f2e2fefaaa5698cade59de36b587 555 Pfam PF06980 Protein of unknown function (DUF1302) 33 555 6.9E-117 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS02355 50489d1aff6def4cbfb36de88367e3ba 136 Pfam PF13554 Bacteriophage related domain of unknown function 6 131 2.2E-28 T 29-03-2018 IPR025395 Protein of unknown function DUF4128 AM474_RS12715 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 8 54 5.1E-15 T 29-03-2018 IPR007829 TM2 domain AM474_RS12715 5720834efb8e6b1a5a6b3ed0246f3e9d 134 Pfam PF05154 TM2 domain 74 119 7.7E-15 T 29-03-2018 IPR007829 TM2 domain AM474_RS02180 a67ce5069328c8bc981f2012e9bae19f 185 Pfam PF11188 Protein of unknown function (DUF2975) 71 181 7.5E-11 T 29-03-2018 IPR021354 Protein of unknown function DUF2975 AM474_RS00125 496b3bd28b6ff3853accd2ab37a549bb 141 Pfam PF07849 Protein of unknown function (DUF1641) 95 128 2.4E-9 T 29-03-2018 IPR012440 Protein of unknown function DUF1641 AM474_RS13055 77e0bd2083c4a787ccb1090b21723f62 155 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 154 6.3E-60 T 29-03-2018 IPR018729 Protein of unknown function DUF2269, transmembrane AM474_RS08410 83742c932824eb96dd4c27098420d696 182 Pfam PF11000 Protein of unknown function (DUF2840) 33 179 1.8E-59 T 29-03-2018 IPR021263 Protein of unknown function DUF2840 AM474_RS22205 30a701755a1c6d7872959d7baa0a73d6 301 Pfam PF04116 Fatty acid hydroxylase superfamily 111 244 2.8E-20 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AM474_RS18880 a6a18ccb0a32d77bc868446e33eeb3cb 172 Pfam PF13420 Acetyltransferase (GNAT) domain 5 157 1.9E-22 T 29-03-2018 AM474_RS18880 a6a18ccb0a32d77bc868446e33eeb3cb 172 SUPERFAMILY SSF55729 5 169 1.18E-35 T 29-03-2018 IPR016181 Acyl-CoA N-acyltransferase AM474_RS18880 a6a18ccb0a32d77bc868446e33eeb3cb 172 Gene3D G3DSA:3.40.630.30 1 172 8.6E-39 T 29-03-2018 AM474_RS18610 7f67430bef1da164721f71424a745ef9 219 Gene3D G3DSA:3.40.50.850 2 219 1.9E-34 T 29-03-2018 AM474_RS18610 7f67430bef1da164721f71424a745ef9 219 Pfam PF00857 Isochorismatase family 11 202 2.0E-21 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS18610 7f67430bef1da164721f71424a745ef9 219 SUPERFAMILY SSF52499 8 201 2.09E-30 T 29-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 AM474_RS08235 792a339d948a4b4164fba4080d525271 330 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 104 311 1.5E-89 T 29-03-2018 IPR014142 P-type conjugative transfer protein TrbG AM474_RS08235 792a339d948a4b4164fba4080d525271 330 Pfam PF03524 Conjugal transfer protein 103 322 1.2E-64 T 29-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AM474_RS08005 370350142987d7721fc338675d9bfe02 688 SUPERFAMILY SSF117892 60 208 2.75E-9 T 29-03-2018 IPR001107 Band 7 domain AM474_RS26375 2fc1a67cd6ab885c2bc2eb909ee4e157 447 Pfam PF04536 TPM domain 76 198 1.7E-37 T 29-03-2018 IPR007621 TPM domain AM474_RS05595 0b4184efd74a5772473f9c1c2c972a9f 143 Pfam PF06803 Protein of unknown function (DUF1232) 67 102 1.7E-13 T 29-03-2018 IPR010652 Protein of unknown function DUF1232 AM474_RS28530 6508ae744bb0aacd65710cb0d34daac5 389 Pfam PF07690 Major Facilitator Superfamily 252 380 3.6E-11 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS28530 6508ae744bb0aacd65710cb0d34daac5 389 Pfam PF07690 Major Facilitator Superfamily 11 240 6.8E-10 T 29-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM474_RS28530 6508ae744bb0aacd65710cb0d34daac5 389 Gene3D G3DSA:1.20.1250.20 195 389 4.1E-21 T 29-03-2018 AM474_RS28530 6508ae744bb0aacd65710cb0d34daac5 389 SUPERFAMILY SSF103473 5 384 1.05E-33 T 29-03-2018 IPR020846 Major facilitator superfamily domain AM474_RS28530 6508ae744bb0aacd65710cb0d34daac5 389 Gene3D G3DSA:1.20.1250.20 1 194 2.1E-14 T 29-03-2018 AM474_RS20450 2b1795cc389475b3346f361db66e0545 618 Pfam PF13387 Domain of unknown function (DUF4105) 119 291 1.2E-60 T 29-03-2018 IPR025178 Domain of unknown function DUF4105 AM474_RS06600 17b341176dee7ffa3ef1cc41de27c208 112 Pfam PF08888 HopJ type III effector protein 4 108 2.7E-38 T 29-03-2018 IPR014984 HopJ type III effector protein AM474_RS06600 17b341176dee7ffa3ef1cc41de27c208 112 Gene3D G3DSA:3.20.160.10 2 109 2.6E-40 T 29-03-2018 AM474_RS25235 cc15d1cb721019f9c933aaa1ca54495f 176 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 12 163 1.2E-22 T 29-03-2018 IPR013382 CRISPR-associated protein Cse2 AM474_RS25235 cc15d1cb721019f9c933aaa1ca54495f 176 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 21 162 3.4E-32 T 29-03-2018 IPR013382 CRISPR-associated protein Cse2 AM474_RS20570 4cb292d1066489d6618a10f375bad4cd 108 Pfam PF14481 Type 4 fimbrial biogenesis protein PilY2 13 97 3.9E-12 T 29-03-2018 IPR029497 Type 4 fimbrial biogenesis protein PilY2 AM474_RS02330 8d2ef3737f3043357ef5a3e94315b4c0 112 Pfam PF05939 Phage minor tail protein 4 110 1.7E-32 T 29-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail AM474_RS13175 c59a8eb0c3572d5cfa8eeb2f8afad95f 164 Pfam PF04463 Protein of unknown function (DUF523) 4 149 8.2E-40 T 29-03-2018 IPR007553 Domain of unknown function DUF523 AM474_RS19130 4ed799225f344885e0864888f3cd151c 478 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 13 240 5.1E-18 T 29-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AM474_RS23105 20f4b42128cb775c124588792b5aae25 212 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 65 184 3.9E-20 T 29-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component AM474_RS18760 9d3f6447196c2db9fbfd88a3129f9e1d 370 Pfam PF00487 Fatty acid desaturase 72 340 1.1E-30 T 29-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AM474_RS05305 3a37a667aedc6f3b074b65640ae7725f 381 Pfam PF02405 Permease MlaE 165 374 8.2E-67 T 29-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 AM474_RS05305 3a37a667aedc6f3b074b65640ae7725f 381 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 139 376 3.5E-67 T 29-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AM474_RS09825 95345d610ae3968f7f6db3a07e3cacf1 50 Pfam PF03889 Domain of unknown function 5 40 2.3E-18 T 29-03-2018 IPR005589 Protein of unknown function DUF331 AM474_RS19465 306a4f9aa56417f11316bbc92d543ffb 135 Pfam PF13664 Domain of unknown function (DUF4149) 13 97 1.7E-5 T 29-03-2018 IPR025423 Domain of unknown function DUF4149 AM474_RS00265 05073825688987fb4bc4ee7629e48efe 311 Gene3D G3DSA:3.30.450.20 42 177 5.5E-14 T 29-03-2018 AM474_RS00265 05073825688987fb4bc4ee7629e48efe 311 Gene3D G3DSA:3.30.450.20 178 308 3.9E-12 T 29-03-2018 AM474_RS00265 05073825688987fb4bc4ee7629e48efe 311 Pfam PF08269 Cache domain 81 304 9.1E-9 T 29-03-2018 IPR004010 Double Cache domain 2 AM474_RS28500 821bb9c27d562179499d001d67536335 120 Pfam PF04320 Protein with unknown function (DUF469) 15 116 1.7E-32 T 29-03-2018 IPR007416 Protein of unknown function DUF469 AM474_RS06405 595158bb047d5f183faa01052ad5b07c 87 Pfam PF06146 Phosphate-starvation-inducible E 59 83 1.9E-5 T 29-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like AM474_RS08630 9a854449328b3813c42354c9045a7f37 129 Pfam PF11162 Protein of unknown function (DUF2946) 9 127 6.8E-11 T 29-03-2018 IPR021333 Protein of unknown function DUF2946 AM474_RS20305 32d330268378b897713161652821c056 688 Pfam PF02554 Carbon starvation protein CstA 35 411 9.5E-169 T 29-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AM474_RS20305 32d330268378b897713161652821c056 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 1.3E-35 T 29-03-2018 IPR025299 CstA, C-terminal domain AM474_RS06410 2ef33bb259949c4c2330d7a10c9c058b 95 Pfam PF12021 Protein of unknown function (DUF3509) 6 88 8.5E-28 T 29-03-2018 IPR021898 Protein of unknown function DUF3509 AM474_RS19565 6d6b852cff42ff986e31dd4200fa8ea7 104 Pfam PF11006 Protein of unknown function (DUF2845) 25 100 4.3E-21 T 29-03-2018 IPR021268 Protein of unknown function DUF2845 AM474_RS04780 2d9c5b465ba3e02b5c62ac1158f051ff 180 Pfam PF02674 Colicin V production protein 6 144 5.1E-35 T 29-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM474_RS21720 51ccafb6b8b97c20e4a9655e7421db84 203 Pfam PF11008 Protein of unknown function (DUF2846) 15 146 1.0E-33 T 29-03-2018 IPR022548 Domain of unknown function DUF2846 AM474_RS05620 a3a78d673a2dba06de795ce2e7b4e85d 311 Pfam PF01758 Sodium Bile acid symporter family 42 219 8.0E-44 T 29-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AM474_RS31665 39ae0aaefed1ea445bc748c3259a3a0c 141 PIRSF PIRSF029509 1 141 4.3E-48 T 29-03-2018 IPR016923 Uncharacterised conserved protein UCP029509, membrane AM474_RS30935 674ddbd4cae7dfb201bedc6123a5b8fe 238 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 57 211 3.6E-36 T 29-03-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 AM474_RS00560 dbb5608b3a24771f586d468832cddb82 455 Pfam PF07044 Protein of unknown function (DUF1329) 83 425 1.0E-109 T 29-03-2018 IPR010752 Protein of unknown function DUF1329 AM474_RS00560 dbb5608b3a24771f586d468832cddb82 455 Gene3D G3DSA:2.50.20.10 159 448 1.3E-42 T 29-03-2018 AM474_RS09780 be05d0e113a0a0bb648619241225e282 340 SUPERFAMILY SSF52540 112 293 2.52E-40 T 29-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM474_RS09780 be05d0e113a0a0bb648619241225e282 340 Gene3D G3DSA:3.40.50.300 109 316 6.4E-29 T 29-03-2018 AM474_RS09780 be05d0e113a0a0bb648619241225e282 340 Pfam PF02562 PhoH-like protein 113 316 7.1E-95 T 29-03-2018 IPR003714 PhoH-like protein GO:0005524 AM474_RS15425 a95295f5657de90dab318c404176e7f3 314 Pfam PF03547 Membrane transport protein 165 299 5.1E-8 T 29-03-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 AM474_RS29475 a2ab9117289917887d1a2bc780260953 84 Pfam PF06568 Domain of unknown function (DUF1127) 30 66 2.8E-7 T 29-03-2018 IPR009506 Protein of unknown function DUF1127 AM474_RS06830 dc4d1d851d959c632347f82217f8d30e 266 Pfam PF14257 Domain of unknown function (DUF4349) 27 250 7.2E-24 T 29-03-2018 IPR025645 Domain of unknown function DUF4349 AM474_RS02545 b0be85c91d08f35a3d6db9dc9edb8389 76 Gene3D G3DSA:1.20.58.350 2 37 0.25 T 29-03-2018 AM474_RS02545 b0be85c91d08f35a3d6db9dc9edb8389 76 Gene3D G3DSA:1.20.58.350 40 74 0.16 T 29-03-2018 AM474_RS08065 8f20f1317b94b201dae343e472d57a44 228 SUPERFAMILY SSF160246 4 68 1.2E-13 T 29-03-2018 AM474_RS08065 8f20f1317b94b201dae343e472d57a44 228 Gene3D G3DSA:1.10.40.30 31 83 0.27 T 29-03-2018 AM474_RS27205 944f76a46e2c03ebe17d022b28d90fdf 158 Pfam PF12975 Domain of unknown function (DUF3859) 28 157 3.8E-45 T 29-03-2018 IPR024331 Domain of unknown function DUF3859 AM474_RS17840 05fd89ca047723a2985a0b61b7a9fecb 85 Pfam PF13272 Putative 2/3 transmembrane domain holin 1 56 5.0E-19 T 29-03-2018 IPR025140 Putative 2/3 transmembrane domain holin AM474_RS15715 15e8a5f141ea0a4a6a6114a9e5a50b58 809 Gene3D G3DSA:2.130.10.120 173 782 0.002 T 29-03-2018 AM474_RS03585 d43b7c4e8763da52096340fd0b9ea48c 171 Pfam PF05232 Chlorhexidine efflux transporter 25 88 9.3E-25 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AM474_RS03585 d43b7c4e8763da52096340fd0b9ea48c 171 Pfam PF05232 Chlorhexidine efflux transporter 93 156 9.9E-24 T 29-03-2018 IPR007896 Chlorhexidine efflux transporter AM474_RS29500 b97c9da248f0bbd1ca9413352a60d8b5 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 98 2.2E-23 T 29-03-2018 IPR008407 Branched-chain amino acid transport, AzlD AM474_RS15235 3774b903c283412eab8c6aeb71cb081b 262 Gene3D G3DSA:1.25.40.10 35 214 1.5E-5 T 29-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AM474_RS22180 ba116f73e8f8f6bd21c55662e1935c8f 159 Pfam PF10722 Putative bacterial sensory transduction regulator 11 135 5.4E-17 T 29-03-2018 IPR019660 Putative sensory transduction regulator YbjN AM474_RS06755 fe7302cb7a818e1f5d3d617edb389d34 152 SUPERFAMILY SSF55811 9 132 9.21E-21 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS06755 fe7302cb7a818e1f5d3d617edb389d34 152 Gene3D G3DSA:3.90.79.10 7 151 7.4E-22 T 29-03-2018 AM474_RS06755 fe7302cb7a818e1f5d3d617edb389d34 152 Pfam PF00293 NUDIX domain 10 119 1.7E-12 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS06755 fe7302cb7a818e1f5d3d617edb389d34 152 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 29-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AM474_RS17070 8ad7c39917fa7681aa9d312d462dfcf3 230 SUPERFAMILY SSF161098 13 208 1.96E-40 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17070 8ad7c39917fa7681aa9d312d462dfcf3 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 223 3.6E-21 T 29-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AM474_RS17070 8ad7c39917fa7681aa9d312d462dfcf3 230 Gene3D G3DSA:1.10.3720.10 1 227 3.7E-38 T 29-03-2018 AM474_RS17070 8ad7c39917fa7681aa9d312d462dfcf3 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 3.0E-22 T 29-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AM474_RS03605 9fc214fada44864f4863611dd6639a2f 254 Pfam PF02517 CAAX protease self-immunity 150 239 9.2E-14 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AM474_RS13290 b29c1bc1f1bcd7c55590e5cf8f627dd3 463 Gene3D G3DSA:2.40.160.10 1 463 4.4E-126 T 29-03-2018 AM474_RS13290 b29c1bc1f1bcd7c55590e5cf8f627dd3 463 Pfam PF03573 outer membrane porin, OprD family 30 461 1.9E-152 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS26325 983e5c6c11273c226dde70730681c35b 427 Pfam PF02120 Flagellar hook-length control protein FliK 295 372 8.7E-23 T 29-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal AM474_RS14795 8c4e08e4d90ebb9e7b69aa62af7b74a3 217 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 202 8.2E-56 T 29-03-2018 IPR003744 Queuosine precursor transporter AM474_RS14795 8c4e08e4d90ebb9e7b69aa62af7b74a3 217 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.9E-35 T 29-03-2018 IPR003744 Queuosine precursor transporter AM474_RS12410 eb5d23adf3fe34698e915be419258518 174 SUPERFAMILY SSF50630 31 163 3.75E-36 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS12410 eb5d23adf3fe34698e915be419258518 174 Pfam PF05618 Putative ATP-dependant zinc protease 30 166 5.2E-49 T 29-03-2018 AM474_RS12410 eb5d23adf3fe34698e915be419258518 174 Gene3D G3DSA:2.40.70.10 28 157 1.3E-33 T 29-03-2018 IPR021109 Aspartic peptidase domain AM474_RS26150 11186501b6ce967fab440f02a65b7c81 463 Pfam PF00474 Sodium:solute symporter family 32 416 6.7E-42 T 29-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 AM474_RS01725 9f5c2141a7cf0adf8fd05f39ded78e38 199 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 43 65 1.1E-5 T 29-03-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin AM474_RS30820 5fdb91c1c5986f63eb2bc603a503969f 355 Pfam PF01757 Acyltransferase family 7 322 6.0E-26 T 29-03-2018 IPR002656 Acyltransferase 3 GO:0016747 AM474_RS17745 f37ed27359093490bd3345b7c1d0251e 250 PIRSF PIRSF028589 1 248 1.4E-47 T 29-03-2018 IPR016893 Protein of unknown function UCP028589 AM474_RS12995 df478aef218a511cce0ae6e71c18f660 461 Pfam PF11067 Protein of unknown function (DUF2868) 148 444 7.9E-89 T 29-03-2018 IPR021296 Protein of unknown function DUF2868 AM474_RS13360 e30ecdf09c634f152d4e6a33f3d579fa 250 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 6.7E-25 T 29-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AM474_RS09960 3b143ada1970c245c2773d9d4d7f5f3f 97 Pfam PF07119 Protein of unknown function (DUF1375) 10 83 4.6E-24 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 AM474_RS13685 1b8e9d25eddef58dab957b2ee7d94c94 477 PIRSF PIRSF006060 2 472 1.1E-81 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS13685 1b8e9d25eddef58dab957b2ee7d94c94 477 Pfam PF13520 Amino acid permease 21 411 2.3E-38 T 29-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AM474_RS13490 91d063cd6eccdc70959280a6bc374d4b 480 Pfam PF11394 Protein of unknown function (DUF2875) 252 418 2.3E-30 T 29-03-2018 IPR021531 Protein of unknown function DUF2875 AM474_RS13490 91d063cd6eccdc70959280a6bc374d4b 480 Pfam PF11394 Protein of unknown function (DUF2875) 17 240 2.2E-11 T 29-03-2018 IPR021531 Protein of unknown function DUF2875 AM474_RS18780 d4e10f9685e89a2cd8abb2ae299b160d 207 Gene3D G3DSA:2.40.50.140 33 124 3.4E-8 T 29-03-2018 AM474_RS02910 9fe5575ebc5987636d756e4c0beb9dd5 94 Pfam PF11284 Protein of unknown function (DUF3085) 1 88 1.1E-30 T 29-03-2018 IPR021436 Protein of unknown function DUF3085 AM474_RS31405 4dbc2183d490de4b13c7006e17c94393 443 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 386 5.9E-34 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS31405 4dbc2183d490de4b13c7006e17c94393 443 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 7 412 1.8E-75 T 29-03-2018 IPR010263 Type VI secretion protein, VC_A0114 AM474_RS08140 50f9b45141fe090f1ae54922d3370156 203 SUPERFAMILY SSF55811 10 178 2.84E-32 T 29-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 AM474_RS08140 50f9b45141fe090f1ae54922d3370156 203 Pfam PF00293 NUDIX domain 28 136 5.8E-11 T 29-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AM474_RS08140 50f9b45141fe090f1ae54922d3370156 203 Gene3D G3DSA:3.90.79.10 3 187 2.3E-39 T 29-03-2018 AM474_RS11445 2ab585c9d670ee77ad246fa7d3ddf036 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 104 168 1.8E-7 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS11445 2ab585c9d670ee77ad246fa7d3ddf036 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 378 452 1.6E-24 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS11445 2ab585c9d670ee77ad246fa7d3ddf036 612 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 216 289 1.6E-20 T 29-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal AM474_RS24045 5bea338b0b8865b0c64ebeeca5032ff6 206 Pfam PF03458 UPF0126 domain 91 163 1.2E-21 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM474_RS24045 5bea338b0b8865b0c64ebeeca5032ff6 206 Pfam PF03458 UPF0126 domain 5 79 6.1E-20 T 29-03-2018 IPR005115 Uncharacterised domain UPF0126 AM474_RS13025 5ad0b11f80044b8db20e5b6c4581153a 251 Pfam PF05742 Transport and Golgi organisation 2 1 234 7.1E-58 T 29-03-2018 IPR008551 Transport and Golgi organisation protein 2 AM474_RS23875 e0e937e41e14aec901568ae53f88a943 357 Pfam PF01594 AI-2E family transporter 20 345 3.2E-72 T 29-03-2018 IPR002549 Transmembrane protein TqsA-like AM474_RS09195 bde2bea6e450346d8840c2b2a8b26a63 731 Pfam PF04632 Fusaric acid resistance protein family 30 714 4.3E-216 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS13825 37a37564a9f86a74bbef99755cb7f44e 452 Gene3D G3DSA:2.40.160.10 1 452 3.2E-92 T 29-03-2018 AM474_RS13825 37a37564a9f86a74bbef99755cb7f44e 452 Pfam PF03573 outer membrane porin, OprD family 29 450 7.8E-140 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS12000 4a56bb7bc5ef18dc4a22cad80f6dddc1 341 Pfam PF04536 TPM domain 31 154 4.4E-41 T 29-03-2018 IPR007621 TPM domain AM474_RS30045 1a0011c29faae456ddc1ad96b19c2690 95 Pfam PF10711 Hypothetical protein (DUF2513) 2 84 4.7E-17 T 29-03-2018 IPR019650 Protein of unknown function DUF2513 AM474_RS29835 cc97fc3ac195b91ba935b7bd318ff50c 132 Pfam PF03860 Domain of Unknown Function (DUF326) 111 128 5.2E-5 T 29-03-2018 IPR005560 Protein of unknown function DUF326 AM474_RS01395 2d81ed0a4250c6cfb8066b29128297ca 361 Pfam PF05359 Domain of Unknown Function (DUF748) 139 275 4.2E-13 T 29-03-2018 IPR008023 Protein of unknown function DUF748 AM474_RS05850 9fe0b2aa6df1293e801b9cf11f77b2c7 664 Pfam PF04632 Fusaric acid resistance protein family 16 657 1.7E-196 T 29-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 AM474_RS26685 f84969c89ca1466fbb756c81df16318b 425 Pfam PF06181 Urate oxidase N-terminal 4 294 2.0E-128 T 29-03-2018 IPR010389 Urate oxidase N-terminal AM474_RS16660 8e98dc022c2d4c117a5d9ec34fde1290 139 Pfam PF03748 Flagellar basal body-associated protein FliL 37 138 3.8E-21 T 29-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 AM474_RS04665 00f82d4eb6a8bea0fb62504fc6fc0d73 321 Pfam PF08907 Domain of unknown function (DUF1853) 17 300 4.6E-94 T 29-03-2018 IPR015003 Protein of unknown function DUF1853 AM474_RS17130 af435cfdf0e61a0644afbba0285f24ed 78 Gene3D G3DSA:1.10.150.20 9 77 1.4E-5 T 29-03-2018 AM474_RS04130 44a86d43502ee9358056b7894be07ffc 177 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 2.2E-50 T 29-03-2018 IPR018639 Domain of unknown function DUF2062 AM474_RS01185 c4db9f81fcfd1f05274f0299be2f8677 117 Pfam PF00816 H-NS histone family 13 105 5.9E-6 T 29-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 AM474_RS16145 06344119da127168214d1efdf1c700bc 123 Pfam PF09685 Domain of unknown function (DUF4870) 17 122 4.3E-40 T 29-03-2018 IPR019109 Protein of unknown function DUF4870 AM474_RS17760 e8200a3a8f0d5cc7dbc5d9accb3a9a27 169 Pfam PF07030 Protein of unknown function (DUF1320) 2 154 8.4E-27 T 29-03-2018 IPR009752 Bacteriophage Mu, Gp36 AM474_RS27475 1b135deb68338023274196c8964398ec 246 Pfam PF13503 Domain of unknown function (DUF4123) 23 138 1.0E-22 T 29-03-2018 IPR025391 Domain of unknown function DUF4123 AM474_RS04535 7f41a58c0cf8e2491dc0dc2094ad6ad1 172 Gene3D G3DSA:3.40.50.10070 25 170 1.1E-8 T 29-03-2018 AM474_RS29990 d29c461da004688c6af1a6dfe5fe5931 190 Pfam PF13628 Domain of unknown function (DUF4142) 50 183 1.6E-40 T 29-03-2018 IPR025419 Domain of unknown function DUF4142 AM474_RS29990 d29c461da004688c6af1a6dfe5fe5931 190 Gene3D G3DSA:1.20.1260.10 38 186 5.0E-26 T 29-03-2018 IPR012347 Ferritin-related AM474_RS19860 f9aeea2587df1eed7f546b89a5c5ea12 948 Gene3D G3DSA:3.40.50.300 8 815 1.0E-7 T 29-03-2018 AM474_RS05295 b200c34d4f3034c31e28acc478d88aed 123 Pfam PF03692 Putative zinc- or iron-chelating domain 6 97 5.6E-12 T 29-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AM474_RS24100 aeb3eb19f1661844d89df8ddee0a228a 293 SUPERFAMILY SSF103088 168 280 6.28E-26 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24100 aeb3eb19f1661844d89df8ddee0a228a 293 Pfam PF00691 OmpA family 195 274 1.3E-13 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24100 aeb3eb19f1661844d89df8ddee0a228a 293 Gene3D G3DSA:3.30.1330.60 133 286 2.6E-26 T 29-03-2018 IPR006665 OmpA-like domain AM474_RS24920 16a9ff2afceb2a95e56445a9ba98cde6 182 Gene3D G3DSA:1.20.1600.10 8 181 2.4E-4 T 29-03-2018 AM474_RS02805 8b0062d57d880f5c10b24c4fcce1b214 175 Pfam PF11358 Protein of unknown function (DUF3158) 11 165 9.1E-75 T 29-03-2018 IPR021502 Protein of unknown function DUF3158 AM474_RS00565 42c7e1b9e9838ebe14d67afc9a913f89 552 Pfam PF06980 Protein of unknown function (DUF1302) 39 551 2.6E-107 T 29-03-2018 IPR010727 Protein of unknown function DUF1302 AM474_RS20390 266a17cb35bb171709e52b560e6722d0 162 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 80 - T 29-03-2018 IPR010916 TonB box, conserved site AM474_RS05845 e9476dd620fab16eaabab386c6f9d741 67 Pfam PF07869 Protein of unknown function (DUF1656) 6 59 2.0E-20 T 29-03-2018 IPR012451 Protein of unknown function DUF1656 AM474_RS08620 8d836902c4ea11df5998758a41f0ac64 190 TIGRFAM TIGR04061 AZL_007950_fam: AZL_007950 family protein 18 183 1.2E-70 T 29-03-2018 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 AM474_RS08925 1998c616a2927536c17110fd9a7a616a 161 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 9 158 1.5E-24 T 29-03-2018 IPR018681 Protein of unknown function DUF2165, transmembrane AM474_RS28785 aecf6d0b966337d76438778b04051ee0 255 Pfam PF04116 Fatty acid hydroxylase superfamily 76 206 1.6E-28 T 29-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AM474_RS29100 bcdf866463d980a5d26ede08572b770f 191 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 9.5E-56 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM474_RS29100 bcdf866463d980a5d26ede08572b770f 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 181 1.3E-30 T 29-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AM474_RS08640 6f64481c85e503d0a5c303df76aafe2e 131 Pfam PF14248 Domain of unknown function (DUF4345) 7 121 3.3E-16 T 29-03-2018 IPR025597 Protein of unknown function DUF4345 AM474_RS22285 692f23fbce9f418116d4785f6112dfa4 245 Pfam PF13645 L,D-transpeptidase catalytic domain 44 210 1.1E-63 T 29-03-2018 IPR032676 Putative L,D-transpeptidase catalytic domain AM474_RS14305 92eb0506c514bdd794ede8aa2350b2eb 399 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 49 347 1.5E-93 T 29-03-2018 IPR018683 Domain of unknown function DUF2169 AM474_RS04755 71a1da1c90e1f6d927095df3984470a9 235 Pfam PF11356 Type II secretion system protein C 36 164 4.3E-22 T 29-03-2018 IPR024961 Type II secretion system protein C, N-terminal AM474_RS15275 f46ab47ac7bf29bf4033db4061a33638 96 Pfam PF11191 Protein of unknown function (DUF2782) 22 96 7.4E-24 T 29-03-2018 IPR021357 Protein of unknown function DUF2782 AM474_RS03185 e6da9b466a7482b1ed3fdab4272f863f 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 9.2E-21 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM474_RS08345 fbad1070c4391770c6dd46cf3ddc7c6c 85 Pfam PF02583 Metal-sensitive transcriptional repressor 10 82 5.4E-22 T 29-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AM474_RS27765 2fcb0246009a74c521f181d811bd93f0 295 Pfam PF05844 YopD protein 1 295 1.2E-151 T 29-03-2018 IPR008898 YopD-like AM474_RS28850 d02f3d0649dddc5688fd3cbfb7ea654a 383 Pfam PF03929 PepSY-associated TM region 12 360 1.2E-54 T 29-03-2018 IPR005625 PepSY-associated TM protein AM474_RS07290 39a0dc1f05c9aed959cf06343b258382 416 Gene3D G3DSA:2.40.160.10 6 416 8.3E-109 T 29-03-2018 AM474_RS07290 39a0dc1f05c9aed959cf06343b258382 416 Pfam PF03573 outer membrane porin, OprD family 25 414 2.0E-146 T 29-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 AM474_RS23270 6830d02b51ed6f30d9ee682114bbbdc8 153 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 2.5E-25 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 AM474_RS23270 6830d02b51ed6f30d9ee682114bbbdc8 153 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.1E-20 T 29-03-2018 IPR009921 Domain of unknown function DUF1456 AM474_RS08955 70a03704ee5612777bdd19a4c148a67a 156 Gene3D G3DSA:3.30.530.20 3 156 5.4E-13 T 29-03-2018 IPR023393 START-like domain AM474_RS08955 70a03704ee5612777bdd19a4c148a67a 156 SUPERFAMILY SSF55961 1 152 3.08E-8 T 29-03-2018 AM474_RS01970 e71315ebcd9c4816e02ccddc03819f4d 147 Pfam PF09335 SNARE associated Golgi protein 30 141 6.0E-14 T 29-03-2018 IPR032816 SNARE associated Golgi protein AM474_RS01970 e71315ebcd9c4816e02ccddc03819f4d 147 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 8 117 9.0E-7 T 29-03-2018 IPR020143 Uncharacterised protein family, RP436 AM474_RS02930 1aa69aaef97423234b04bce5b956a667 229 Pfam PF11679 Protein of unknown function (DUF3275) 14 222 6.2E-96 T 29-03-2018 IPR021693 Protein of unknown function DUF3275 AM474_RS02990 721cd7d117c0345b105ddc06619bfe08 199 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 61 164 3.5E-42 T 29-03-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 AM474_RS06370 807fb4a7a3d5eda4210ff98a294d6a61 113 Pfam PF07119 Protein of unknown function (DUF1375) 11 99 3.0E-21 T 29-03-2018 IPR010780 Protein of unknown function DUF1375 AM474_RS13770 c0e361636bba751e46ca79bb2088e2a7 239 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 199 1.7E-37 T 29-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AM474_RS23695 d47db817770722fd59f37db08628fe2f 116 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 108 1.9E-17 T 29-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family AM474_RS00340 d1958d49abbafdde450f7e26f299c6bb 257 Pfam PF11136 Protein of unknown function (DUF2889) 26 100 3.0E-9 T 29-03-2018 IPR021312 Protein of unknown function DUF2889 AM474_RS13160 0ed828df8e2dd68b41ea2741a1847bfd 145 Pfam PF14347 Domain of unknown function (DUF4399) 54 145 1.0E-39 T 29-03-2018 IPR025512 Domain of unknown function DUF4399 AM474_RS10200 6ae02258be1727ba7f493ade240fdcb9 172 Pfam PF11736 Protein of unknown function (DUF3299) 30 165 2.0E-46 T 29-03-2018 IPR021727 Protein of unknown function DUF3299 AM474_RS23230 ef4a8e9290f875ded970305681258fc1 176 Gene3D G3DSA:1.10.10.60 107 151 0.08 T 29-03-2018 AM474_RS19260 2ef9a418e728003f2f9b2f39578f9177 187 Pfam PF13590 Domain of unknown function (DUF4136) 25 186 6.1E-30 T 29-03-2018 IPR025411 Domain of unknown function DUF4136 AM474_RS27500 95589ea6cd5599abf5c55e4c0655afec 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 17 489 5.3E-217 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS27500 95589ea6cd5599abf5c55e4c0655afec 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 489 1.8E-182 T 29-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM474_RS23240 7b990c623271fe88bc68bdf8427cc535 91 Pfam PF05449 Putative 3TM holin, Phage_holin_3 9 89 7.8E-27 T 29-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 AM474_RS17200 5269f3f04c4cc3ecc88d7a411ff2bdea 272 Pfam PF02517 CAAX protease self-immunity 169 258 1.1E-19 T 29-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AM474_RS30105 e4c7e8b3a871295ad0a2ccb61d0d64b1 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 304 9.8E-12 T 29-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AM474_RS16795 0a657278c1e101b8adb457a604d8b017 422 Pfam PF01384 Phosphate transporter family 26 409 8.4E-113 T 29-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 AM474_RS04570 317f5ffda23c43410e639b30d15c8456 164 Pfam PF14316 Domain of unknown function (DUF4381) 6 162 1.3E-44 T 29-03-2018 IPR025489 Protein of unknown function (DUF4381 AM474_RS06835 752e6f3c7ce94efda23dd62c048c5401 408 Gene3D G3DSA:1.10.530.10 217 382 9.0E-6 T 29-03-2018 AM474_RS09700 4522eef0e41926de2de81533b838f9db 69 Pfam PF10981 Protein of unknown function (DUF2788) 14 60 3.5E-22 T 29-03-2018 IPR021249 Protein of unknown function DUF2788 AM474_RS31500 8fabd194584810ebd44487d44b8f21b7 80 Pfam PF07867 Protein of unknown function (DUF1654) 12 78 7.0E-31 T 29-03-2018 IPR012449 Bacteriophage F116, Orf28 AM474_RS31140 ea1401ee6552d48b895a29f1af95459b 205 Pfam PF01810 LysE type translocator 17 192 2.0E-17 T 29-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020