        recF NONE
        gyrB    6719 ..    6747 + -16.8  -4.57073   CAGACCGACCCTCAT        GGAAACCCCGGC CTGGC GCCGGGGTTTTC        TTTTTGCGCCAGGTA 100 49
HR116_RS00035   10375 ..   10401 + -17.3  -4.63218   TCCTGTAGTGAAAAA         GGCCCGGTGTC GCGAG GACGCCGGGCC         TTTTCTTCGAGGCGG 100 33
HR116_RS00050   14192 ..   14220 +  -3.7  -3.73072   CTTCTTCCTGGCGTA        CAATGCGCGTTCG AGT CGAGCGAGGAGTG        TTTCGTGGAGAAATT  56 136
HR116_RS00055   15119 ..   15134 + -10.4   -4.8048   TGGTACTGAGGAAAG              GGCGTC GGAA GACGCC               TTTTTCATATCCGGG 100 32
HR116_RS00060   15547 ..   15567 +  -8.9  -2.54896   GGCTAGAATGCGCGC            CGCTCGGCA TGG TGCCGGGCA            TGGGTTCCCTCACCC  53 114
HR116_RS00065   16281 ..   16314 + -22.6  -3.33696   CGAGGCAATCTGGAG     GAAGGGCGCAACGG CCGTGA CCGTTGCGCCCTTC      TTCATTCAGGAGGGG 100 48
HR116_RS00100   22723 ..   22754 + -20.2  -3.85698   GTGCAGAATCCCTGA      CTCGAAACCCCCGC CTCG GCGGGGGTTTCGCG       TTTCTGGGGGAAGGA 100 26
        dprA NONE
HR116_RS00110   24624 ..   24640 +  -7.9   -3.2794   CCCTGGCTGCTTCGG              CCAGGGC GAA GCGCTGG              TTGATCTCGATGCGG  56 106
        hemF NONE
        aroE   27535 ..   27554 +  -9.4  -3.20164   AGTTGTCAGGCGGCA            TTTGAGAC GTAC GTCTCAAA             TTGGCTTCCATCTGA  61 40
HR116_RS00130 NONE
HR116_RS00135 NONE
HR116_RS00140   30471 ..   30492 +  -5.8  -3.21099   CGCACCGACATCGCC           GGC-GGCGC CCTGA GCGTCAGCC           TTCGTAGTGCAGGCG  51 13
HR116_RS00160 NONE
HR116_RS00165   36133 ..   36156 +  -7.4  -3.56544   CTGCTCGCGCTCCTG          GGCGCGCCGCA GCT TGCGG-GTGTC          TTCGTTGTTGCTGGT  60 247
HR116_RS00190   40098 ..   40108 +  -2.4  -2.66733   GATTTGCTGCACTTT                 TCCG GCT CGGC                 TAGTGTCCATTGAAC  38 49
HR116_RS00195   40484 ..   40506 + -12.6  -2.63631   CAGGCTATGAGGGCG           GCGTGCCTCC ATG GGCGGCGCGC           TCGTCTCAACCTTGC  67 119
HR116_RS00200   40829 ..   40856 +   -17  -4.64861   GACGAGCAGTATCCG        GGGCCGGCTTTC CCAT GGGAGCCGGCCC         TTTCTTTTGGCCGCG 100 53
       tpsB2 NONE
       tpsA2   53319 ..   53329 +    -4    -3.695   ATGAAAAAAATAGTG                 TCTT TTA AAGA                 TTTAAAGTGTTTGAG  56 37
HR116_RS00215   53807 ..   53823 +    -3  -2.76909   AAGAATAAATAAAGG              GGTAGA TTTAT TTTACC              TACTCTAATTTTCTA  40 58
HR116_RS00220   54616 ..   54628 +  -3.3  -2.57564   TTTTCTCCTTTTCTC                GTCGC GGG GCTAC                CTTCTGCGGAACTAA  39 74
HR116_RS00225   55375 ..   55387 +  -9.1  -3.92522   TTGCTTTGAGTGTTT                CTGCG TGG CGCAG                TTTCTGAAATTAGCA  74 156
HR116_RS00235   56260 ..   56285 +  -5.4  -3.48924   CTTCACGCCGCAAAG         GGCGATTGGCT CAGCC AGCCAC-CGCC         TTGTCTCCGACCTCG  53 52
        exoT   59462 ..   59484 + -15.6  -4.54727   GGTCGACGGCAGAGA           CGGACACTCC CAA GGGGTGTCCG           TTTTCATTTGCGCCG 100 43
HR116_RS00250 NONE
HR116_RS00255 NONE
HR116_RS00260   62099 ..   62131 +  -6.2  -3.52896   AGTCAGGGGAAATCC     TTGCCACCGCCC-CG GTGA TGCGGGCGATGGCGG      TTGTCTCCATCATCG  55 452
HR116_RS00275 NONE
HR116_RS00280   65309 ..   65323 +  -2.2  -4.60053   TTCAGGATATTTCAT               TAATTT TGT AGATTA               TTGTTTTTCCTTTGT  68 372
        asnB   67434 ..   67469 +  -9.7  -3.03124   GAGCGTGACGCGGGG   CG-TGGCGGGTTCGGGC TGCT GTCCG-GCCCGCCGGCG    TCTTCAGGCGTCGGG  60 39
HR116_RS00295 NONE
HR116_RS00300   69152 ..   69182 +  -3.2  -3.92963   TTGCACGGCGCGGAT      GCGC-TGGCCATC GGCGGA GAGGGCGAAGCGC       TTCTTGTCGTTGTTC  58 366
HR116_RS00320   71933 ..   71948 +  -8.2  -2.78384   AGCCGCTGATCGAGG              CGTCCC CTGC GGGGCG               TCTCGTGGAGACCGA  54 56
HR116_RS00325 NONE
HR116_RS00330 NONE
HR116_RS00335   73711 ..   73723 +  -7.7  -3.25823   GCCGTCATAGACCAC                CTGCT GGT AGCAG                TTGATCTGCACCGGC  56 184
HR116_RS00350 NONE
        prlC NONE
HR116_RS00375   80363 ..   80382 +    -8  -3.55622   CGGGGCCCGGTGCGA            TACTGTAT CCAT ATACAGTA             TTTCGCCGGGTTCCC  62 76
HR116_RS00380   81950 ..   81964 +   -10  -3.96624   GGCGCGCGGTACGCC               GACCTG CTG CAGGTC               TTTCTCGTAGGCCTG  77 516
        tssA NONE
        tssB NONE
        tssC  102565 ..  102587 +   -17  -3.07113   AGGCATTCAACGACA           GCGCCTGCCA TGG TGGCGGGCGC           TTGCATAGCGTAGTG  88 40
HR116_RS00460  103254 ..  103292 + -18.8  -3.35813   GTACTGAATTCCACC   GGGTCGTCCGTCGCGTCC GCC GGGCGCCATGGCCGACCC   TTCATTCGCATCCGG  93 165
HR116_RS00465 NONE
        tssE NONE
        tssF NONE
        tssG NONE
        tssH NONE
HR116_RS00490  112537 ..  112565 +  -8.8  -3.10354   AGCGGGCCAGCCGGT       CGACGACCAGCGC CAGA GCGC-GGTCGATG        TATTCGATGGGTGTC  56 379
        vgrG NONE
HR116_RS00515 NONE
HR116_RS00520 NONE
HR116_RS00525 NONE
HR116_RS00530 NONE
HR116_RS00535 NONE
HR116_RS00540  122587 ..  122605 +    -8  -4.19238   GGCCAGGTCATGGCC             GCTGGCGC GGT GCGCCGGG             TTTTCCCATTCGACG  72 60
HR116_RS00545  123741 ..  123767 +  -3.7  -3.01712   GACGACCTCTGGGAA        GC--CCCGTTCCG GGG CTGAACGGGTCGC        TATTACAAGAAAAAA  45 110
HR116_RS00550  125563 ..  125586 +  -5.2  -3.14463   GGTGGCGTCGAGCAT          GTTCTCCACC GCAT GGTGGACGGC           TTCGTCCAGCCGGTT  49 150
        coxB NONE
        ctaD NONE
HR116_RS00570 NONE
HR116_RS00575  130648 ..  130662 +  -5.6  -3.05844   GGGGGAATCAGAAAT               GCCAGG GCG CGTGGC               TGTTCAGCTCGCCGC  49 49
HR116_RS00585 NONE
HR116_RS00590 NONE
HR116_RS00595 NONE
HR116_RS00600  134269 ..  134282 +  -3.7  -3.54653   GGTGGACCACTATCT               GCCGC TGAA GCTGC                TTCTCTGATCCCACT  53 4
HR116_RS00605  134962 ..  135014 + -10.4  -2.91728   CCTGATTCCCTTCCC TCCC-CCCACCGTC-CGCTCCGGGCC TCA GGCCCGGCGCATGCCGATGTGCGGGA TGTCGTCTTCCAGGT  61 36
HR116_RS00615  136216 ..  136231 +  -3.2  -3.67175   GATATCACTCGAGCC              CTTGCC AGTT GACAAG               TTCCTTTTAAGAACT  51 198
HR116_RS00620 NONE
HR116_RS00625  137766 ..  137776 +  -5.4  -3.98913   CGCCGATAGCGGCTT                 GTCA GGC TGAC                 TTCTTTGCGTATAGG  63 151
HR116_RS00630 NONE
HR116_RS00635  139982 ..  140003 +  -6.5  -3.72695   GGGTTCCAACCCGGG           ACCGTCGCGG CGC CCG-GACGGC           TTTCGTCCGCCGCCT  62 53
HR116_RS00640  140830 ..  140844 + -11.4  -2.78463   CTGGCAGGCGGTGGT               GGCTGG TGG CCAGCC               TATAGTGAAGCGGGT  63 66
HR116_RS00645 NONE
HR116_RS00670 NONE
HR116_RS00675  144954 ..  144972 + -17.4  -4.86731   ACCTTGCCTGAAGAA             GCCCGGCC ATT GGCCGGGC             TTTTCTTTGGAGGGC 100 45
HR116_RS00700  150909 ..  150920 +  -7.2  -3.87627   CGAGCTTCGGCCGCC                CGCC GAAC GGCG                 TCTTTTCTCTACGGC  68 60
HR116_RS00710 NONE
HR116_RS00715 NONE
HR116_RS00720  157105 ..  157119 +  -3.6  -4.28067   GGCAGGTTCTTCGAT               TAGTTG TTT TAACTA               TTTATATATTCTTCG  64 45
        ahpC  157898 ..  157926 +  -7.3  -2.64274   CCAGCCAACGCGCCG        TGCAGGGCGGATG TCC CATCCGCCGGGGA        TACGTTTGCCCGAAT  51 110
        ahpF  159551 ..  159578 + -19.8   -4.4078   CCGTCGAACCAGGGA        CGCCCGGAGCGC GAAA GCGCCCCGGGCG         TTTTCGTTGGCGCGA 100 53
HR116_RS00740  162319 ..  162343 + -12.2  -2.53995   TGAGGCGGGCGCCGA          CAGAGGAGGC GCCAG GCTTCCTCTG          TCGGTTCGCATAGGT  65 38
HR116_RS00745  163860 ..  163874 +  -7.8  -3.53343   GGCCGCCTGTTCGCG               CGGCTC GGC GAGCTG               TTTCGGCAGCGCGTT  60 419
HR116_RS00760 NONE
HR116_RS00765  167126 ..  167156 +  -7.5  -2.64155   CGCGGCGAAACGGCC      TGAGCCGCCCGTCG CGCG CGG-GAGCGGCTCG       TGGGTTTGCCGCGGG  51 23
HR116_RS00770  168193 ..  168250 +   -12  -3.21595   AAGTGAGGGGCGGCG TGCCGGGTAGCCCGGCG-CG-CGACCCGC AAG GCGTTTCGTCGTCGCCGG-CTTCTCGGTA TTGATGATAAGCATT  70 35
HR116_RS00775 NONE
HR116_RS00780  169922 ..  169932 +  -2.4  -2.71712   TGATTCGCTGACGGT                 GGCC CCG GTCC                 GTTTGGCCGCAGGAA  39 30
HR116_RS00785  172556 ..  172604 +  -6.7  -3.41878   GCCGCGGTGCTGCCC GGCGCAGGATCGGTGAATCGTT CCGTTC GACGATGCTCC-ATCCAGTGCC TTCTCCCTTCAGGGA  57 129
        pcaQ  173650 ..  173663 +  -5.3  -2.87211   TGCACTGATAAAGCA               TAACC AAAT GGTTA                TGTATAGGGCCGGAT  46 33
        pcaH NONE
        pcaG  175245 ..  175259 +  -7.8  -2.54193   CCGACAGTACTACAG               TCGGAG GCG CTCCGG               TCAATTGCGATGATC  50 158
HR116_RS00805  176275 ..  176291 + -15.1  -3.05993   CAATTCTGGGAGTTT              CCGGCCG GAT CGGCCGG              TATCTGTATGGATCG  81 133
        triA NONE
        triB NONE
        triC  181670 ..  181692 + -16.3  -3.14132   GGCCATCCGCCCCGA           CGCCGGGCA GGGTA TGCCCGGCG           TTGCTACGGCGACGG  86 113
HR116_RS00825 NONE
HR116_RS00830  183097 ..  183117 + -15.5  -6.15259   GGTACCCTGTCCTTG            CGCCGCATA TGA TATGCGGCG            TTTTTTTTTGCCTTC 100 102
HR116_RS00835  185151 ..  185182 + -10.8  -3.64716   GAGCCGGTAGTTCAT      CCCGGTCTCGCGCTG GAA CAG-GCGCGACAGGG      TCTTTTCCGAGGTGC  73 234
HR116_RS00845  187922 ..  187933 +  -2.2  -4.63527   AAGGCAGAAACTGTC                CTTG GGGT CAGG                 TTTTTGCCGTCGTAG  70 485
HR116_RS00855  189136 ..  189153 +  -3.3  -4.56597   GAGCGGCAGGAATAA             GCTGATC ACCT GGACAGC              TTTTTGCAGAAGCCG  69 191
HR116_RS00860 NONE
HR116_RS00865 NONE
HR116_RS00870  192427 ..  192437 +  -6.8   -3.4759   TAGCTCTGGCCGTGG                 CGCT GGG AGCG                 TTCGTTCTCCTCCCT  56 480
HR116_RS00940  207238 ..  207271 +  -8.8  -3.07816   CAGCCAAGACCTGCC     GCGC-GGCTCGGC GATCTCGCG GCCGCGCCAGCGC     TTGCCTGGGTGGCGG  55 428
HR116_RS00960  212757 ..  212797 +   -11  -2.63712   CCCATCACTACGACA GCGCGGCGCCAGCGCCGGGC CTC GCCCTGCGC-GTCGGCG-GC ATTCCTGATTTTCTT  62 369
HR116_RS00965  213641 ..  213654 +  -3.1  -3.15861   GGCTTCAAGGTGGGG               TTGTG ATCG CACAG                TTCGTCGCGGTGGTG  44 20
HR116_RS00970  214950 ..  214962 +  -3.3  -2.78463   GCGCTGGAGCGCCCG                TCGCC GAA GGCCA                TGTAGTCGAACGGCT  40 451
HR116_RS00980  216908 ..  216929 + -18.7  -3.04792   GAGGAAGGGAAACCG           CGCGGCGGC TCAG GCCGCCGCG            TGTTGCGCCTGGTCC  91 40
HR116_RS00990 NONE
HR116_RS00995  221502 ..  221512 +  -2.4  -2.78384   TCCGGAAGGCATGAC                 GGAC CCG GCCC                 TCTCCTCGCCGGGGA  39 27
HR116_RS01000  222564 ..  222598 + -20.2   -4.2008   GTTCCGGCGAATAGC     TAGCAGAACTGCGACA TGC TGTCGCAGTTCTGCCA     TTTCTTCGCGTCTAT 100 122
HR116_RS01005 NONE
HR116_RS01010 NONE
HR116_RS01015  226075 ..  226092 + -14.1   -5.0925   CTGAGTCCACCAGAA             CCCCGGC CCAG GCCGGGG              TTTTTCGTTTTCGCG 100 48
HR116_RS01020 NONE
HR116_RS01025 NONE
HR116_RS01030  228404 ..  228435 +  -2.9  -5.45652   GCGGGCAACGGTTTC      GACCGCTCCGATCC GGGCA GGGGAG-AGCGGTC      TTTTTTATTCCGCAT  91 71
HR116_RS01040  229937 ..  229949 +  -4.7  -3.31144   GACCGCGTCGGCGCC                CAGGC GCA GCCCG                TTCTCCACCTCCCAG  49 414
HR116_RS01070  236126 ..  236143 +  -6.9  -2.70932   CCGTGACGTCCTGAA             CGCAGCG CCAG CGCTGCA              TCGTTAACCCAAGCG  49 27
        mdcA NONE
HR116_RS01080 NONE
HR116_RS01085 NONE
HR116_RS01090 NONE
        mdcE  240730 ..  240747 +  -5.5  -2.52464   GCGCGGGTGCGCCGG             CTGCTGC GCGA GCAGTGG              TGAATTCAGGAGCGA  45 5
HR116_RS01100  241453 ..  241464 +  -2.2  -3.07962   ATCGCGGAGGTCGAG                GCAT GAGC GTGC                 TGTTCGCCTATCCCG  41 20
        mdcH NONE
        madL NONE
        madM NONE
HR116_RS01135 NONE
HR116_RS01140 NONE
HR116_RS01145  251186 ..  251218 +  -5.3  -3.59262   GTCCCCCCATAACGA      CGATGCGGCGCCTGG CGA CCGCGCGCGGAACCG      TTTCGGCCTCTGGCC  55 88
HR116_RS01150  252520 ..  252533 +  -5.2  -3.23216   CCTCCAGGCCGGAGA               GGCC CAGGCC GGCC                TTGATGGTGGTCGGC  51 200
HR116_RS01165  254879 ..  254893 +  -8.6  -3.18033   GCTTGCTAACGTTCT               GTTCGA TTA TCGAAC               TGTTAATCGATTATC  58 65
HR116_RS01170 NONE
HR116_RS01175 NONE
        pcaF  257859 ..  257879 +  -4.5  -2.60496   CCCGGTATCAAGAGC            GCGCGTCGC GCG GCGCTGCCC            ATGTTTCGGCGGCGG  41 62
HR116_RS01185 NONE
HR116_RS01190 NONE
        pcaD NONE
        pcaC  261893 ..  261933 +  -8.9  -3.28712   GGCGTCCCGGTAGGT CGCCGGCGGCGCTA-GCG GTAGGG CGAATGGCGTCGCAGGCG  TTATCCGCCGAGGCG  60 28
HR116_RS01205  263007 ..  263027 + -13.3  -3.14002   GAGCTTGCTCGTTCG            CTGATGCCG TTT CGGCATCGG            TATGTTCGATATTCT  73 74
HR116_RS01210  264037 ..  264047 +  -8.2  -3.29511   GGGTAGGGCGAATAA                 CGCC ACC GGCG                 TTATCCGCCGATACA  60 80
HR116_RS01220  266690 ..  266708 + -10.3  -4.23213   CCTTTCCCGACATCA             GCGTTCG AATAG CGAACGC             TTTCTTGCCTGTCAC  81 62
HR116_RS01225 NONE
HR116_RS01230  268788 ..  268802 +  -5.6  -3.68351   TGTAGCGCCACCGCG               CAGGCA GGT TGCCCG               TTTGCATAATGGAAC  60 36
HR116_RS01235  270260 ..  270278 +  -2.2  -3.33261   GTAGCGCGCGGAGAA             CAGCGCGG AAA CGGTGCGG             TTATCGAGCTTGCCG  44 480
HR116_RS01250  274929 ..  274946 +  -4.7  -3.14132   CTGTGAGAATTGTCG             GGGCTCC GGCA GGTGCTC              TTCCTACAGCCGGGC  48 35
HR116_RS01255  275684 ..  275718 +   -10  -3.05384   ATCCGTGCCTGACTC    CGGT-CCCCTCTCCC CTTGGC GGGAGAGGGGCGCCA     TTCAGTCGCCCAGGC  62 29
HR116_RS01280  281485 ..  281515 +    -3  -2.59564   TCAGCGGAGAGGACA       TGGCGGCAGCTCGC AAC GGGAACAGCCGCGG       ATTATCGCGTGAGCC  39 468
HR116_RS01330 NONE
HR116_RS01335 NONE
HR116_RS01340 NONE
HR116_RS01345  296158 ..  296175 +  -4.9  -3.73224   GCGTTATCTCTGGTC             TTCACAG TATA TTGTGAA              TTTGGTAAAACGTGA  58 426
HR116_RS01355  297519 ..  297549 +  -5.4  -3.98075   CCGTAAATCGTAAGA       GACCCTGTCCAA ATTTGCA TTGAACAGGGGC       TTATTTCGCTACTGT  63 35
HR116_RS01410  318023 ..  318055 +  -9.8  -3.89215   CTAACTGCGTGCTTG     GTGGCGGG-CGCTGG CGAG CCAGCGGCCCGGGAC      TTTACGTTTATGGCC  76 122
HR116_RS01415 NONE
HR116_RS01420  319015 ..  319045 +  -4.7  -3.39787   TGACTTCGTGGTTAG       TTGGCAGTCAG CCATCTGAT CTGACTGCCCG       TGTTATCTGCTTTGA  53 87
HR116_RS01430  320545 ..  320557 +  -7.7  -2.73364   CTCAATATGCTAGGC                GCTCA TCC TGAGC                TCATTGACCTGCCAC  52 109
HR116_RS01435 NONE
HR116_RS01440  326280 ..  326296 +  -5.9   -4.5442   TCAATCTCCAAAAAA              TGATCTT CTA GAGATCA              TTTTGTGCTTGCAAA  76 272
HR116_RS01450 NONE
HR116_RS01455 NONE
HR116_RS01460  328101 ..  328122 + -15.9   -2.7795   AACAACTGAAGTAAC           GAAGGGGCC GAAA GGCCCCTTC            TGCTTAGGTGCTTTC  78 32
        gabD  330818 ..  330832 +  -5.6   -3.3482   AGTCGATCATCGCAT               GCTGCC TTG GGGAGC               TTCCTTCCCGCCTTC  52 196
        gabT  332200 ..  332221 + -18.7  -4.41616   AAGCGATACCCCCGA           GGCCCGCGC GTCC GCGCGGGCC            TTTCTTTCAGAGGCT 100 53
HR116_RS01480  333887 ..  333904 +  -8.3  -3.05384   CAACAGGTCCAGCGC             CGGGTCG ATGT CGTCCCG              TTCGATGCAGCCGAA  55 215
HR116_RS01490 NONE
HR116_RS01495  336242 ..  336263 +  -7.2  -2.70932   TCAAGCCACTGGAAC           GCGGCGCC CACTGA GGTGTCGC            TCGTTCGCCCGGAGG  52 12
HR116_RS01500  336757 ..  336799 +  -4.6  -3.01712   CGTGGCAGCATCAGC ACGAAGTCGCTGCCCGACAG CAG TTGCAGGGCGGCGACGTAGC TGTTGGCGCGCGCGG  45 209
HR116_RS01525  341135 ..  341156 + -10.9  -2.78384   GAGCGTTACTTGCGA           TCCG-CAGCG ATG CGCTGGCGGA           TGTGATCGGCGCGGG  63 75
HR116_RS01540  343940 ..  343967 +  -3.3  -3.71848   CTCGTAGACCTCGCC        GGGCGAG-CCGA TCTGC TCGATCACGCCC        TTGTTCATCACCACG  53 366
HR116_RS01575  351656 ..  351687 + -23.8  -3.57144   TGCGTCAGCCGCCTC      TGCAACGCGCCGGC TCCT GCCGGCGCGTTGCG       TTTCGGCGTCGCCAA 100 62
HR116_RS01580  353241 ..  353261 + -19.7  -4.15044   CGGAATGAACCCACC            GCGCCGGGC GGC GCCCGGCGC            TTTCTTCCCGCCACA 100 33
        speB  354224 ..  354265 +   -13  -3.59262   CTGCCTGCTTGCCGA GTC-GGCCGCGCGAAGCGCC TGAC GGCGTTCCGC-CGGCCTGGC TTTGGCGCTATAACG  77 4
HR116_RS01590  355284 ..  355303 +  -5.6  -4.12532   ACTGGCTGGAGCCTT            TCCCTGCC GTTC GGCGGGCA             TTTCTGTATCGCCGC  67 49
HR116_RS01595  356798 ..  356814 +  -5.7  -3.79747   GCCCCGTCGTTCCAT              CGTCGCG GGT TGCGCCG              TTTCCTGATCCATCG  60 479
HR116_RS01600  358363 ..  358389 + -23.8  -5.26875   GCCGGACAGGAAAAA         GCCCGCGTCCTC CTG GAGGACGCGGGC         TTTTTTCATTCACGG 100 47
HR116_RS01630  365180 ..  365198 +  -3.9  -3.91897   CGGCTGTTGGGGCCG            GACTCTCA ACCC TGAG-GTC             TTTATGACTACCAAG  58 44
HR116_RS01635  366563 ..  366603 + -22.5  -3.08679   GCTTTCCGTTTGATC  CTGACCGGGGGCGGCCGGC GTG GTCCGCCGCTCCCGGACAG  TCTTGAATAGAAGAG 100 28
HR116_RS01640  368046 ..  368083 + -15.5  -2.71011   GCGTTGGCCAGGCTC   ACCGGGTGGTGACGCGA TCGG TTGCGCCACCGCCCGGA    TACTTCAACAAAAAT  78 75
HR116_RS01645  369514 ..  369531 + -10.5  -3.40403   AGCTCACTCATGTTT             CCCGGCG GAAT CGTCGGG              TTGTCATGAAACCCG  68 324
HR116_RS01650 NONE
        potA NONE
HR116_RS01660 NONE
HR116_RS01665  373821 ..  373838 + -12.7   -4.8622   CCGCCGAAAAGAAAA             GGCCACC TGCG GGTGGCC              TTTTTCATTGGCGCG 100 46
HR116_RS01685 NONE
HR116_RS01690 NONE
HR116_RS01695 NONE
HR116_RS01700  381607 ..  381657 + -14.1  -2.65808   CGTTCAACGCCCAAA CT-CAGCCG-CGGATTTGCCGTAGC GCA GCGAAGGCAAAGCCGTCGGCTGGAG TGCCTTGTTAGGCAT  71 136
       intI1  385454 ..  385468 +  -5.6  -2.64616   GCACTGACAGCGAGC               TGCCCG AGC CGGTCA               TCCTGTGGGTGGCCA  46 256
        hutU NONE
HR116_RS01740  391906 ..  391920 + -12.8  -3.06796   GAGACGAATTTCCAG               GGCGGC GCG GCCGCC               TTCAATCCGATGAAA  71 39
        hutH  393494 ..  393513 + -10.6  -3.72576   GAACGCGCTGCTGCC            GGCCCGGC TGTT GCCGAGCC             TTTGATACCCGCCCC  74 1
HR116_RS01750  395037 ..  395057 +  -8.1   -4.1196   ACGATCGAGGCCGTT            CCCCCGGGC GCG GCCCGCAGG            TTTTCCAACTGCCTT  76 78
HR116_RS01755 NONE
HR116_RS01760 NONE
HR116_RS01765 NONE
HR116_RS01770 NONE
HR116_RS01775 NONE
        hutG  401540 ..  401551 +  -5.8  -3.53012   CGAATACGCCAGGAA                CGCA CGGC TGCG                 TTTCCAAGAGGACAG  55 265
HR116_RS01785 NONE
HR116_RS01790 NONE
HR116_RS01795  407076 ..  407103 +  -2.6  -3.29947   CGGTGGATTATTGGT        GCGTTG-GTCGCA TCC TGCTTCGCAGCGC        TTCCTGTCATGGCTG  45 49
HR116_RS01800 NONE
HR116_RS01805  409292 ..  409304 +  -4.7  -2.52464   GCCAGGGCCACCAAT                ACGCC GCT GGCGA                TGGCTTCGCCGCGCA  42 506
HR116_RS01815 NONE
HR116_RS01820  411506 ..  411522 +  -5.7  -3.54408   GGAGATCACCGTGGT              GGCGGCC AGG GGCTGAC              TTACTTTCCATAGCC  57 10
HR116_RS01825  412956 ..  412970 + -12.8  -3.41234   CCATGCTCGTTCTCC               CGGCGC CAG GCGCCG               TTGCTTGGATTGATG  76 518
         pip NONE
HR116_RS01840  414813 ..  414834 +  -7.3  -4.85599   CGGTGCACGTAACGC           GAATGACTG GAAA CAGGCATTC            TTTTTGTCAGATCGC  88 307
HR116_RS01845 NONE
        mdoH  419135 ..  419180 +   -22  -3.77264   TGCCCGCCGCCCAGT CCTGATCCCATGCCCCCGGCGG AACG CCGCCGGGGGCATGG--TCTGG TTCTTGCCTGTTTTC 100 21
HR116_RS01855  420170 ..  420224 +  -8.6  -2.71263   AGTGGCTGAAGGAAA TGGAATGAACCGCT--GACGGCCCCC GCGAA GGGGGCCGTCGTACCTGCGCATTCCA TCGTTCGAGAGAGTT  54 18
HR116_RS01860 NONE
HR116_RS01865  422038 ..  422051 +  -3.7  -3.41051   AGTCCAGCGCCCATT               CGCGC AGGC GCTCG                TTCTGGTAGCGGTAC  49 131
HR116_RS01925  431190 ..  431204 +  -5.6    -4.208   GGCGGCGCCCATCTT               CCGCTT AGT ATGCGG               TTTCTAATTTTCCCC  67 64
HR116_RS01930 NONE
HR116_RS01935  432632 ..  432651 + -16.4  -4.87291   TGGCGGCAAGGCACA            CGCCCGGC ACTC GCCGGGCG             TTTTTCATTCCGGTC 100 45
        rpmE  446316 ..  446334 +  -9.5  -4.81551   CGCTGTACCGAGAAA             GGCGTCC CTGGT GGGCGCC             TTTTTCATGTCCGTG  93 75
HR116_RS01995 NONE
HR116_RS02000  448551 ..  448569 +    -3  -2.65586   TGACAGCCGGGTCCT             GACGATCT TGT GGGGCGTC             GTCTTCTTGCGTATG  39 47
HR116_RS02005  449924 ..  449947 + -16.8  -4.66163   TCCGCCGGATAAAAA          GAAACCCCGC CTTG GCGGGGTTTC           TTTTTGCCTGCGCCT 100 49
HR116_RS02015 NONE
        pilN NONE
        pilO NONE
        pilP NONE
        pilQ  457637 ..  457654 +  -3.3  -2.62184   ATCATGAATAATCAG             GCCATCG CAAT CGGTCGC              TGATATCGAACAACG  39 5
        aroK  458167 ..  458203 + -14.4  -3.52341   ATTCTCGAACGCCTG    CGCAAGTTGCCGCCCC GCTGA GGCGCGGCGAATTGCG    TTATCCTATTGCCCT  83 5
        aroB NONE
HR116_RS02050  461027 ..  461068 + -21.1  -4.19735   CTGCCGTCGCCTCTT GACGAAACTCGCTAGTCGT TAGC ATGACTGGCGGGTTTCGTC  TTTCATTTTGGCGAC 100 47
        gltB NONE
HR116_RS02060  467179 ..  467208 + -20.9  -4.61566   AATCACCGCGATAGA       CAAAAGGCACGGC CCCC GCCGTGCCTTTTG        TTTTGTGCTTTGCGA 100 67
        hemE  468397 ..  468414 + -12.7  -4.72272   GCCGGAACGAAAGAA             GGGGAGC CGAG GCTCCCC              TTTTTCATGCGCGGG 100 41
HR116_RS02080  471708 ..  471720 +  -3.3  -3.01712   CGAACTCAGTGGGCG                GCCTG CGC CAGGG                TGTTGCCAGGCAGGG  43 63
HR116_RS02090  474123 ..  474141 +  -3.8    -3.727   CAGGACCGAGACGGC            GCTCGCG CTTGCC CGCG-GC             TTTGCCTATCATCCG  56 53
HR116_RS02095  475065 ..  475098 + -12.4  -2.70932   CAGCGCGTTGCGGCT     GTGCCGGCCGAGGGC GAGCA GCTC-CGGCTGGCGC     TGCTTCAACGCGGCG  65 137
HR116_RS02140  489049 ..  489060 +  -3.6  -3.57561   CTCGGTGGTGATGCG                GTCG TAGC CGGC                 TTTCGCCAGTTCGGC  51 158
        glnE NONE
        ilvE  501440 ..  501468 +   -14  -3.53811   CACCGAAGAAGGGTG       TGA-CAGGGAGGC GAAA GCCTCCCTGATCA        TTTCCGGAGCCTGAA  81 42
        waaF NONE
        waaC NONE
HR116_RS02185 NONE
        rfaP NONE
HR116_RS02195 NONE
HR116_RS02200 NONE
HR116_RS02205  508518 ..  508552 + -10.1  -2.90992   ACGAGTTAAACGAAA    GC-CGCGGTTGTCGG TCCCACT CCG-CAACCGCGAGC    TGCTTTGAAGAGGTT  61 74
HR116_RS02210 NONE
HR116_RS02215 NONE
HR116_RS02220 NONE
HR116_RS02225 NONE
HR116_RS02230 NONE
HR116_RS02235  515841 ..  515867 + -18.8  -3.01924   TCTCCTGATCGCTGA         TATCGCCGCGCT CAA GGCGCGGCGATA         TCTTCACCGCGCCTG  91 33
        msbA NONE
        hldE  521196 ..  521208 +  -4.7  -4.87389   CAATACATTCCAGAG                CGGGC CTT GCCAG                TTTCTTTTTCCGCTG  82 125
HR116_RS02265 NONE
HR116_RS02270  526176 ..  526192 +  -5.7  -3.18264   CGCGGTCGCGTCCAC              CGCCGGC CTG GTCGCCG              TTGCTGGATGGCCAC  49 76
HR116_RS02295  530568 ..  530600 +    -7  -4.26903   ACCTTCACCCGCCAC     CTACGCGCC-ATCGGC TGA GCCGGTCGGCGGG-AG     TTTTGCTAAGCTGCG  73 8
        waaA  531923 ..  531944 +  -2.9  -3.54424   CGTCGGCCCTCCCCT           GGCCCTG CATCGCGA CAGGGCG            TTTCAGAACGTCGGC  51 50
HR116_RS02315 NONE
HR116_RS02320 NONE
HR116_RS02325 NONE
HR116_RS02330  538171 ..  538206 +  -3.8  -3.01712   CGGCGCCTCGCCGGC    AACCG-CGCGGACGC CTGGTGA GCGGCCGCGGCGGAG    TGTTGGCGCGGCGCC  45 5
HR116_RS02335  540486 ..  540501 +  -5.4  -3.08679   TTTACATCTTCGATC              CGCGCGT TCA ACG-GCG              TCTTACATCCGCCGC  47 71
HR116_RS02340  542058 ..  542079 + -18.7  -4.67641   ATTCGCAGGACCCGA           CGCCCGCCG CATC CGGCGGGCG            TTTTCGTTTTCGCCT 100 47
HR116_RS02345  543073 ..  543098 +  -3.1   -2.7386   AACGTTCCCCTCAAT         TCAGC-GGGCGC TAG GCGCCGAGCAGG         TGATTCCCATGGATT  40 12
HR116_RS02350  544273 ..  544312 +  -9.2  -3.04144   GCTGCGTTGAAGTCC  TGGCTCCCCTCTCC-CTCC AGG GGAGAGGGGAAGGCTGCCA  TGTTCCGAATCGAGA  60 31
HR116_RS02355 NONE
HR116_RS02360 NONE
HR116_RS02365 NONE
HR116_RS02370  550139 ..  550160 + -17.3  -3.10894   GGCCAGTCAAGCGAA           GACGCCCCC GACC GGGGGCGTC            TTGGCTCGTGCTAGT  88 59
        thiC  554216 ..  554231 +    -6  -3.29144   CTGGTCGAGCTTGTT              GGCCAG CAGC CAGGCC               TTGTGCGCCAGCTCG  53 283
HR116_RS02390 NONE
HR116_RS02395  556135 ..  556147 +  -2.6  -3.54935   GCAACTGTGATCTGT                TCCG CTTTC CGGG                TTTGCCGCCACTTTC  49 93
        cpdA  557042 ..  557075 +  -7.9  -2.72344   CGCCGGATACTGACA     TGCCCCCGGTCGCGG GATA CCGCGGCCACGTGCG      TCGTTGCCGATCGGC  52 28
HR116_RS02405 NONE
        parE NONE
HR116_RS02415 NONE
HR116_RS02420 NONE
        parC  563595 ..  563613 + -13.8  -4.13767   GGGGAATGTCGTCTC             CCTGGCGG GTT CCGCCGGG             TTTTCCCCTGACGCA  93 122
HR116_RS02430  564526 ..  564543 + -14.1  -4.98531   GCCGACCAGGAGAAA             GCCCCGC CGAA GCGGGGC              TTTTTCGTTTCGGCG 100 50
        serB  568129 ..  568147 + -17.4  -3.84915   AGAGCGGAAAAGCAA             CGGGCGCC CAG GGCGCCCG             TTCTTCATTCGTCTC 100 89
        motA NONE
        motB  577751 ..  577775 +  -4.9  -3.56568   AGCTGGAGCAGATCA          AGGGCGACTGA GGT TCAGTAGTCCG          TTTCCGGCATGCTTG  55 15
         orn  579434 ..  579476 +  -6.1  -3.57144   ACCACTTCATCAAGC TCTGATCCGTCCGG-ACCGG GCGG CCGGCACCGGCCGGGCTAGG TTTCCCCGTGGCGCC  57 21
HR116_RS02500 NONE
        tsaE NONE
HR116_RS02510 NONE
        mutL  585955 ..  585977 +  -9.1  -3.86194   GCCTTGCAGCTTCGG           GCGCAAAGC CCGAA GCTATGCGC           TTTGTCCAAGAGCTT  74 41
        miaA  586990 ..  587008 +  -3.8  -3.53012   AATTTGTCCGTCTGT             TTCCGG AGCGAGA CCGGAG             TTTGGACGGCGCCAA  51 47
         hfq NONE
        hflX  588690 ..  588704 + -12.8  -3.67976   GGTAGCATGGGTGGC               CGCGCC GCA GGCGCG               TTTCGCGTTACTAGA  77 79
        hflK NONE
        hflC  590805 ..  590847 + -22.1  -3.40403   GGCCAACAAGTAATA CTCGG-TTCTCCGGCGGGCG GCAG CGCCCGCCGGAGAAATCGTG TTATGATGAGCCAGC 100 28
HR116_RS02545 NONE
HR116_RS02550 NONE
HR116_RS02555  593672 ..  593691 + -12.8  -4.54727   GGGGCGATGACGGAA            CGGGCTGC GCAT GCGGCCCG             TTTTCATTTCCGGGG 100 51
         rnr NONE
        rlmB  597769 ..  597802 +   -13  -3.07443   CCCGCTGGAGTGAGC     GCGTGCGGGGCCGC CGCGGC GCGGCCCCGCGCCA      TTCCATCCGCTGTAC  71 28
        rpsF  598419 ..  598436 +  -2.6  -3.12702   CGGACCAGTATTGAG             GAGCCA ATCACA TGGCAC              GTTTCTTCCGTCGTC  43 44
        rpsR NONE
HR116_RS02590 NONE
        rplI  600091 ..  600128 + -21.3  -5.09173   GCGGCAGTCCGCTAA   CATCGGGCACGGTACCG GCAA CGGCACCGTGCCCGTTG    TTTTTTCCGCTGTTC 100 82
        dnaB  601580 ..  601603 +  -9.5  -3.75153   TTGGGTCTTGCCCGG          CGGGCGCCT TACCAT AGGCACCCG           TTTCAGTTGCAGGAC  71 47
         alr  602916 ..  602941 +  -6.1  -3.28712   ATCACCAGCCACTGC         TTGGCGAACTC CACC GGTTTCGCCAG          TTCTCGCAGCAGGCG  53 238
HR116_RS02615  607200 ..  607213 +  -9.5  -3.01712   ACAAGTCTTGCGCTT               CCGGG GCAT CCCGG                TCTTCACGAAGAACC  60 163
HR116_RS02620 NONE
HR116_RS02625  610772 ..  610808 +  -8.6  -4.19704   ATCAAAAAGTGATCG   GTTCCGCGGAGGCCCTG CCGC CCGGGACTCC-CGGACC    TTTTCACTCAGGTTG  76 40
HR116_RS02630  611874 ..  611904 + -20.4  -3.85698   ACGTTTCCCGCTCGG       CACCGACGCCCCGC CCT GCGGGGCGTTGGCG       TTTGTGCGCGGACCG 100 40
HR116_RS02635  613098 ..  613108 +  -4.6  -3.30771   CTACCACTTCCAGGC                 GGGT CAG GCCC                 TTGTGGCCGATCTCG  49 382
         azu  614091 ..  614108 + -14.1  -4.72272   CCGCTGCATGAAAAA             GCCCGGC CGCT GCCGGGC              TTTTTCATGGGCGCG 100 53
HR116_RS02670 NONE
HR116_RS02675  619336 ..  619371 + -15.4  -3.14931   CGTCCTGACAAACGG    GTGCGGCAGGG-CCGGT GAG GCCGCTCCCTGCCGCGC    TTGCTAGACGGTGAA  83 33
HR116_RS02690  623869 ..  623887 +  -3.7  -2.78679   GTGTGGTCGGTCTGG             AGTCCCG CGATC CGGGGCC             GTTTCAGTAGCACCC  42 155
HR116_RS02695 NONE
        livM NONE
HR116_RS02705 NONE
HR116_RS02710 NONE
HR116_RS02715  628757 ..  628772 +  -5.4  -3.01726   TTGTGGATAACGCCG              CCTGAG GTTG TTCAGG               ATTTCTGTGCGGGGG  47 21
HR116_RS02720  629889 ..  629903 +  -3.5  -2.78596   AGCTGACCGGCGGAG              GCG-GC CGGG GCACGC               TATGATGCCCCGGTC  40 35
HR116_RS02725  630942 ..  630999 +  -6.1  -4.20783   CTGGCGTCTCGTGGC GCGGCGGCGAAGTGCTC-GCGATGCAAG CGG CTTGCTTCCCAGCCCAGTTCGCGGGCGC TTTCTTCGATCCACT  70 311
HR116_RS02740  634391 ..  634401 +  -2.4  -3.60792   GAGACGCTGCGTGAG                 GGCC GCC GGCG                 TTTCAGCGTTGGGCG  49 27
HR116_RS02750 NONE
HR116_RS02755 NONE
HR116_RS02760 NONE
HR116_RS02765  641343 ..  641353 +  -8.2  -3.30124   TGCTTCGGCGGATAG                 CCGC TGG GCGG                 TTATCCGCCCTACCG  60 101
HR116_RS02775 NONE
HR116_RS02780  646590 ..  646603 +  -5.2  -3.04144   GCGGATGGGCGAGGC               CGGC GACCAG GCCG                TGTTCGCCGTGGCCG  47 518
HR116_RS02810 NONE
HR116_RS02815 NONE
HR116_RS02820  653460 ..  653472 +  -9.1  -2.57931   GCGGTTCGGCCGGCA                GCCTG TCG CAGGC                GTTCTCCACGCTCAG  54 210
HR116_RS02835  656090 ..  656121 + -12.3  -3.72576   CCGCCGATGTGAGGT      TTCG-CCGGGACGG CGCGT CCGTCCCGGCCGGG      TTTCCTGGGAGAAAA  78 29
HR116_RS02840 NONE
HR116_RS02845  657583 ..  657601 + -13.1    -4.386   TGGGAAAATAGGAAA             GCCCGGC ATCGA GCCGGGC             TTTTCTCGCGCCTTG  95 90
HR116_RS02860  661197 ..  661251 +   -12  -3.35679   CAGGCCGCGTTCGGC GAGCAGGTGGCTGTAGATCGCCTGGA AGC TCTCGGCGATCTGCGGCGCCGTGCCC TTGTGGGTGAACACC  70 141
HR116_RS02870  662586 ..  662607 +  -4.3  -3.64487   GTCGAAACTGACGTA           GAACGGCTG CTGC TGGCCGTCC            TTGTTGAGGATGTAG  55 162
HR116_RS02885  664476 ..  664521 +  -2.4  -3.64703   CGGGTCAGCTCCACG CCGAGC-CCGGCCTCGATGCGC TCCA GCG-AGAGGTGCAGGCGCTCGG TTTCGGTCAGGCGGA  51 465
HR116_RS02895  666750 ..  666764 +  -5.6  -3.13475   GGCGCGGTACAGGCG               CTGGGC GTA GACCAG               TTCCATGTAGCGTTG  49 228
HR116_RS02905  667965 ..  667995 +  -6.1  -4.63218   CACCAGTGGCAGGCG       TCGTCGTCGACGT AGAAG GCTTCGACGAAGA       TTTTCTTCCCGCCGA  78 345
HR116_RS03045 NONE
HR116_RS03050  701361 ..  701388 +  -2.1  -4.28254   TGCCTGAGCCGCGGA        TGTCGCCATT TCACCGATC AATGGCG-CA        TTTTCGCTCTTAGCA  62 34
HR116_RS03055  701951 ..  701985 +  -9.9   -3.6682   TCCCCTGCAGAGAGC     GGGCAGGTCCGGC ACCGCGAAG GCCGCACCAGCCC     TTTCCCTAGATGGGA  70 49
        speA  704127 ..  704157 + -27.6  -4.11275   AAGCGAACCAGGCAA       TGGCCGGCGGGCGC GAG GCGCCCGCCGGCCG       TTTCGTTTCCGTTGT 100 64
        cntO NONE
        cntL NONE
        cntM NONE
        cntI  710910 ..  710938 +  -6.6  -3.53811   GCCAGCCAGGTGAAG       CCGGCGCT-GCCG AGGG CGGCGAGCAGCGG        TTTCACCGCGATCAG  56 227
HR116_RS03095  712775 ..  712785 +  -8.2   -3.5393   TTGCGCCGCGGCATG                 CCGC AAC GCGG                 TTTCCACCAGGTCGT  62 402
        lpdA NONE
HR116_RS03120  716589 ..  716611 +  -6.2   -4.1964   CTTTTGGCCAGTGTC           TTTTCGCCGG ACT CCTGCGGGAA           TTTTCCGATGTTCCA  67 44
HR116_RS03125 NONE
        mgtA  720063 ..  720082 + -12.1  -3.53444   TGGTTCTGAGCGATC            GGCCGGG CTTCGT CCCGGCC             TTTCCCGGCGCGTCG  74 32
HR116_RS03135 NONE
HR116_RS03140 NONE
HR116_RS03145 NONE
HR116_RS03150 NONE
HR116_RS03160 NONE
HR116_RS03165 NONE
HR116_RS03170  727794 ..  727804 +  -6.8  -3.17194   GCCATCCTTTTCCAG                 TCGC TTG GCGA                 TTCGCTTGGCCGGCT  52 226
HR116_RS03195  733458 ..  733488 + -16.9  -2.68881   GACTCTGATCCGCTC       GCCGGGTCGCC GCAGCCCTA GGCGACCCGGC       ATTAGTCTTTGGTCT  84 33
        fdnG NONE
        fdxH NONE
HR116_RS03210  738505 ..  738522 + -12.7  -3.81027   CATCGCCCGACCGGA             GGCCCCA GCGA TGGGGCC              TTTGCATTCATTCCG  81 56
        fdhE  739589 ..  739607 +    -3  -3.93583   TGGGCGTGTCGGTGA             CCCTACCC TGT GGATAAGG             TTTCTCCATGAGTTC  56 78
HR116_RS03220 NONE
        selB  743074 ..  743093 +  -2.8  -3.54424   GTCTCCGGGGAGATG            TCCATCAGC CGC GC-GCTGGA            TTTCGCCGAGTGGCC  49 156
HR116_RS03235 NONE
HR116_RS03240  746793 ..  746815 + -12.8  -2.51464   CGCAACAGCGCCTAT           GGCGTTAATG TGC CGTTAACGCC           CTTGGTGGGTAATGG  67 54
HR116_RS03245 NONE
HR116_RS03250  747938 ..  747951 +  -5.2   -4.4009   CCAGTAGGGCCGAGT               CGGC CGGGTA GCCG                TTTTCTCCGATCAGC  72 260
HR116_RS03260  749255 ..  749267 + -10.5  -3.53012   TGCCTCTGAGAAACC                GCGCC TGC GGCGC                TTTCCAGGAAGGCAG  68 183
HR116_RS03265  750211 ..  750227 +  -5.7  -2.83715   TGCGTCGAGGCCGAG              CGAGGCG CGC CGCTGCG              TGTGGTGGTGGTCGG  48 43
HR116_RS03270  750868 ..  750909 +  -9.3  -3.69354   CGCCTGGCGTCGATT C-CGCGCCGGCGACCAGCGT TTC ACGCAGTTCCCTGGCGTGCG TTTCGCGTTCTCCCC  68 125
HR116_RS03300  754611 ..  754625 +  -5.6  -3.05596   TTTCACCGCTTCGCG               CAGGGC CTT GGCCTG               TTCGCTGGCGGAGTC  47 55
HR116_RS03325  758554 ..  758564 +  -8.2  -3.30124   TGCAGGGCCAGATAA                 CGCC GTT GGCG                 TTATCCGCCCTACCG  60 75
HR116_RS03335  761558 ..  761583 + -14.7  -6.41805   CAACTCCGTGACTTG         GGCGGTGCCGT GCGA ACGGGACCGCC          TTTTTTTTTTGCTGG 100 80
        yedA NONE
HR116_RS03350  763644 ..  763669 +  -2.6  -3.05816   CCGGGCGCCTGACCG         GACG-TGCAGA AGTCG TCTCCAGCGTC         TTCAATACGGAATGA  41 50
HR116_RS03355  764952 ..  764968 + -10.1  -2.77962   AAGCCGGCGCGTCCG              GCTGTGC TCG GCACGGC              GTTTGCCGTATAACG  60 69
HR116_RS03360  765901 ..  765937 +  -7.3  -4.13561   TGGCGAGCGCGAGGA  ACCGCC-GCCGC-C-CTG GTTG CAGTGAGCGGCTGGCGGA   TGTTTTTTCCCGCCA  72 1
HR116_RS03365 NONE
HR116_RS03370  767914 ..  767948 +  -7.7  -2.62983   CTATCAGATATGTGA    C-CGCCCGCTGTCCGG ACCT CTGGCCGGCGGCCGCG     TCGTGTCCGGCTGGG  51 468
HR116_RS03420  779872 ..  779891 +  -9.2  -3.65812   TCCAGTACATCGACA            GGGCGACG CAGG CGTAGCCC             TTCTGTTGCACGGCG  68 194
HR116_RS03430 NONE
HR116_RS03435  781242 ..  781259 + -14.1  -4.72272   TGCGGAAATGAAAAA             GCCCGGC GAAT GCCGGGC              TTTTTCGTGGAACGC 100 54
         fur  782332 ..  782363 + -13.8  -4.27316   CGCAACGGTTCCATG      CGAAAACGGCGACCC TGG GGG-CGCCGTTTTCA      TTTTCCATTGAAGGA 100 44
        grpE NONE
        dnaK  786841 ..  786871 + -19.1   -2.8805   CCGGTACGCATGATC      CGCC-ACGCGGGAG CCTG CTCCCGCGTTGGCG       TGTCTGGAGGGTCCT  91 76
        dnaJ  788079 ..  788091 +  -2.6  -4.38154   AGCCGCGTCCGGGTT                CCGC GTGGA GTGG                TTTTATGCGACGTAT  62 65
        dapB  789007 ..  789036 + -14.3  -5.03314   ATGAATCGAAAAAAA       GCGGGATGACTCT TCAC GGTGTCATCCCGC        TTTTTTACACCTGCG 100 130
        carA NONE
        leuE NONE
        carB NONE
        greA  794594 ..  794627 +  -3.7  -3.09516   CGAGGTTCGCCATAT     CTAAGCGCGCC-CCGT TGC GCGCAGGCGCGATCAG     TTGGCTGCTGGCCCA  45 22
HR116_RS03495  795020 ..  795039 + -13.6  -3.37344   AATACGTCTGAACCA            GGTCGGGA AGTT TCCCGACC             TTGGTTGGATGGGAC  77 30
        rlmE  796176 ..  796193 + -10.5  -2.74558   AAGGGTTACAGACAA             CGCCTGC GTGC GCGGGCG              CTTGTGTAGTACTTT  60 113
        ftsH NONE
        folP NONE
        glmM  800432 ..  800445 +  -2.4  -3.07443   CTTGATTTTGCTTGC               CAGT CTGGAA ACTG                TTGAGTAACATCTGC  41 36
HR116_RS03525 NONE
        secG  801644 ..  801662 +  -3.8  -3.14344   AAGTAAGAGAAAGGT             TTCTGCCG AGG TGGTGGAA             TTGGTAGACACGCTA  47 35
HR116_RS03535  801744 ..  801758 +  -9.2  -4.03234   TACCATATAAGCAAG               CCCCGT CCT GCGGGG               TTTGTCTCCGCAAGG  76 36
HR116_RS03540  801911 ..  801926 + -10.4  -5.10461   AACCAGTTTTTCAGG              GCCCCT TTTT AGGGGC               TTTTTGTTAGCTGGA 100 36
        rimP NONE
        nusA NONE
        infB  806575 ..  806620 + -12.5  -5.78622   GATGGCGAGTGCGTA ACCAC-AGCGCCCGGGCCGGCT TCC AGCTGTCCCGGGCGTTTGTCGC TTTTTTTTCCAGTGA 100 39
        rbfA NONE
        truB NONE
        rpsO  808409 ..  808431 +    -4  -3.87994   ACGAGGCGGGTATCG           GCGTCGGGCT TCC AGCTTCGCGC           TTTCTAGGAATCGAT  58 99
         pnp  810637 ..  810654 + -12.7  -4.54727   CGTGATCGATGAAAA             CAGGGCC CTCG GGCCCTG              TTTTCGTTTCCGCGA 100 48
HR116_RS03580 NONE
HR116_RS03585  811492 ..  811517 + -23.3   -4.7254   AACAGGTAGAAAGAA         GCCCCGCCGGG ATTG CCCGGCGGGGC          TTTTTCATGGGCGCT 100 40
HR116_RS03670 NONE
        sfsA  833708 ..  833730 + -12.7    -3.727   GCGCGGCCACTCTCA           GCGGCGTTC GAGCA GGACGCCGC           TTTCCATGTGGTGGG  81 60
HR116_RS03690  837288 ..  837317 + -15.7  -2.60512   CGACAGGCCGTTGGC       GCCCTCCATGCGCG CGC CGCGC-TGGCGGGC       TGCGTTGATCTTGGC  74 335
        alaC  840247 ..  840272 + -17.7  -4.42238   TGCTACAAGGAAAAA         CGCCGTTTTCC CTGG GGAAAACGGCG          TTTTCGTTAGCGTCC 100 52
HR116_RS03715  841520 ..  841533 +  -4.5  -3.53012   CGGATCGTGCAGTTG               GCG-GC TCA GCACGC               TTTCCAGAAGGACCC  52 119
HR116_RS03735 NONE
HR116_RS03740  846928 ..  846957 + -11.3  -3.71607   TGAAATCGGTTGTTC       GCCCCCGCGCACT GTTC GGTGCGCTGGGGA        TTTCGCTCGTGTTGG  76 38
HR116_RS03745 NONE
HR116_RS03750  848726 ..  848741 +  -4.6  -3.36766   CGTTGAAGGAGTCGC              CATGCG CATT CGCCTG               TTCGCTTTCTGTCTG  50 35
HR116_RS03755  849632 ..  849653 +  -2.9  -4.07568   GAAGGGCGCGAGGCC           TGGAGCCGCG TAT CGC-GCTACG           TTTTCGCGGGCAAAA  58 43
        mrcB NONE
HR116_RS03785 NONE
HR116_RS03790  857157 ..  857185 + -18.3  -3.90112   AGCTTCGGCAGTAAA        GAAAAACCCGGCT ACA GGCCGGGTTTTTC        TTTGCTTCAAGCAAG 100 41
HR116_RS03800 NONE
HR116_RS03805 NONE
        ilvN  860481 ..  860493 +  -6.2  -3.14211   TCTGAACTGAAAGCA                GGCC CGCGA GGCC                TTACTGAAGGGGAAT  51 36
        ilvC  861547 ..  861578 + -19.6  -3.67775   GGCTCCGGCGACAGA      CGAAGAAACGCGGC CCCG GCCGCGTTTTTTCG       TTCTTGCCTGGCGAT 100 43
        pssA  862509 ..  862523 +  -5.6  -2.78384   AGCTGATGTAATTTC               CAACGG GCT CCGTAG               TCTACTGGCACAAAG  46 35
        msrP NONE
        msrQ  864636 ..  864653 +  -2.6  -4.82548   CAGCAACGCAAGTAA             CACTCG TGAATT CGAGAG              TTTTATCTCTTTTTA  74 480
HR116_RS03835 NONE
HR116_RS03840  866398 ..  866408 +  -5.4  -2.81464   ATCTGCCCAGACCCA                 CCAA TTG TTGG                 TGTGCTGCGTGATCC  44 23
HR116_RS03845  866526 ..  866563 + -10.1  -3.34398   ACAATCGTCGAAAGC   TCAGAAATGAATGTTCG TGGA TGAACATTGATTTCTGG    TCTTTGCACCAGAAC  66 47
HR116_RS03850  869630 ..  869651 +  -5.9  -3.33162   TGACCATATAACACC           CAAACAATC TGAC GATTGTGTG            TTGTAAGGTGAAGTC  52 20
         rrf  869888 ..  869923 + -19.2  -4.07568   CGTCAAGCTCCTATC    CCAAAACCCCTGGTCA GCGA TGACCAGGGGTTTTGC     TTTTGCGCGCGGAAA 100 33
HR116_RS03860 NONE
HR116_RS03865 NONE
HR116_RS03870  873663 ..  873686 + -16.8  -4.45945   ACCGGCAAAAAGAAA          CGCCGCTTAC CTGG GTAAGCGGCG           TTTTCGTTCATGCCT 100 48
HR116_RS03900  882189 ..  882211 +    -9   -4.8667   TCCGCTGCAGCGAGC           GCGGCGACCG CGT CGTTCGCCGG           TTTTTCTCGACTATG 100 102
HR116_RS03905 NONE
HR116_RS03910 NONE
HR116_RS03915  885043 ..  885073 +  -4.5  -2.83403   GGGGGCGAAACCGTC       CCCGCGCATCGCC TAATT GCCGGTGCCCGAG       ATTTGATCGAAGAAC  44 117
HR116_RS03920 NONE
        rimI  886454 ..  886476 +  -6.9  -2.56914   ACCAGCATTCCGATT           CTCGCCTGC ATACC GCAGGCAGG           TCCCTTCATGCGGTA  48 118
HR116_RS03930 NONE
         can  888487 ..  888497 +  -8.2  -3.21099   CAGTATCGCTTGAGT                 CCGC TGG GCGG                 TTGCTGCTGAGAGAG  58 5
HR116_RS03945 NONE
HR116_RS03950  891749 ..  891766 + -14.1  -5.24129   GACGTTGATCGTAGA             GCCCCGC AGAT GCGGGGC              TTTTTTATGCGAACC 100 45
HR116_RS04000 NONE
        prfA NONE
        prmC NONE
HR116_RS04015  903056 ..  903087 +  -7.2  -4.27316   GCCGTCTGCGGGCAA      CGCC-ATGGCGGTTG AGT CGGCCGCGGTCGGCG      TTTTCGATTCCGGGG  76 11
HR116_RS04020  903862 ..  903882 +  -2.6   -5.0538   TAGTCGTTTAGTCGT           TC-CTGGCA GACG TGTCAGCGA            TTTTTTGAACTAAAG  77 30
HR116_RS04025  904531 ..  904547 + -10.8   -4.7497   GCACGGGCGAAAAAA              GCCGGG TTCAT CCCGGC              TTTTTCATGCCTGCG 100 44
HR116_RS04050 NONE
        hemH  911459 ..  911471 +  -3.3   -3.6284   GATCCGCTGCGCGGC                GCGGT ATG ACGGC                TTTGAAGTGCTCATT  51 53
HR116_RS04060  913178 ..  913210 +    -4  -3.18023   CCCGGTACGGCACGT     TCTGCGC-GGCGCCG CTAC CGGTGCCTGCCTGGG      TGTTGCTGGTGGTCC  45 119
HR116_RS04105 NONE
HR116_RS04110  922322 ..  922342 +  -8.2  -3.17075   ACCGGGACTGGATGC            GCGCCCAG TTCGC CTGAGCGC            TTCGCTTCGGCGGCG  58 9
HR116_RS04115  922904 ..  922924 +  -5.4  -2.57132   TGAGCCTCGCCGCGC           GCCGGG-AG TAAA CTGCCTGGC            CTTATCCCGCGCCGG  43 38
HR116_RS04120  923285 ..  923300 + -11.8  -5.26875   CCATGCAGCGAAAAG              CCCGCC CTTC GGCGGG               TTTTTTCGTTGCGCG 100 46
HR116_RS04125  923963 ..  923978 + -11.8  -3.67597   TCCACAAATGAAAAA              GCCGCC CGAA GGCGGC               TTGTTCCGTAGCGCG  75 42
HR116_RS04135  926967 ..  926984 + -14.1   -4.7373   GGCGGTAACGAGAAA             GCCCGGC GGAT GCCGGGC              TTTTTCATGCGCTCG 100 44
HR116_RS04145  927870 ..  927886 + -15.1  -3.92592   TTGCCCGATGGAGAA              GCCCGGC GGC GCCGGGC              TTTCGTCTTCAGGAT  91 121
HR116_RS04155 NONE
HR116_RS04160  929602 ..  929659 +  -3.1  -3.30124   CTGTTGTGTTGAGGC GGCCG-CCGCTCAGTCGGCCGCCAGTTC GAA GACCTGCCAGCGCACCGAGCTGACGCCC TTCTCCAGGCTGACC  46 29
HR116_RS04170  931777 ..  931826 +  -8.4  -3.29471   CCGCGAAACCGCGAC CCTGCTCGCCGGCGCGGGCGGCC TCGAT GGCGGCGT-TGAGGGCGAGCAGG TTGGTCTGCTCGGCG  58 447
HR116_RS04180  934521 ..  934544 +    -6  -3.77303   CGGCCGGCGCGCCGA          CAGGC-TTACC ATC GGAAACGCCTG          TTGTGTATTTCCGTA  60 66
HR116_RS04185  936117 ..  936161 +  -5.5  -3.06656   TCTCCGGCTCTCGAG GGCGAGTGGTGGGGCAGGCAT CCG GTGCCTGCCTGAACTGTAGCC GTTTCTATGCATTTT  49 493
HR116_RS04215  946861 ..  946888 + -14.2  -2.62263   ACCCTTTTCGCAATG        CGCACTATCGTC TCCG GGCGGTAGTGCG         TCATCTGCCCGAGGT  74 40
        cdrB  948646 ..  948687 + -11.7  -2.53759   GTTCCGGAGGCTGCT G-ACGGAGC-CCCTCTCCG GTTCTG CGGAGAGGGAGGTCCGTGC TCAATTCCGAGTGTT  65 56
HR116_RS04225  949340 ..  949358 + -13.1  -4.44667   CAAGGTGCGAGAAAA             GCCCGGC TCGAT GCCGGGC             TTTCTTATTGCCGAG 100 58
HR116_RS04235 NONE
HR116_RS04240 NONE
HR116_RS04245 NONE
HR116_RS04250 NONE
HR116_RS04255 NONE
HR116_RS04265  959638 ..  959654 +  -2.1  -3.87075   GTCAGCGGGGATAGC              CACAAGC CTT GCGGGTG              TTTCTGCCGGGTGCT  54 60
HR116_RS04270  960544 ..  960573 + -19.5  -3.61398   CGTGTTGTCCGGCAA       TGAAAAAGGGCCC GTTC GGGCCCTTTTTCA        TTGTTCCGCCGACGC 100 83
HR116_RS04280  961429 ..  961447 +  -5.2  -4.81249   GGGCGCATTGATATT             CCTAATCG GCG CGGTGAGG             TTTTTCAATTTAGCG  78 30
HR116_RS04285  963082 ..  963102 + -15.4  -3.34109   GATTGATCGCAACCG            GGGCGGCC ATCCA GGCCGCCC            TTCCTCTATCGGTTT  84 35
HR116_RS04290  963700 ..  963710 +  -4.6  -2.63301   CAATGTTCGGAGGAG                 GCCT GCT GGGC                 TAGTCTGGAGGTGTC  43 48
HR116_RS04295  964033 ..  964049 + -15.1   -4.8048   CAACGGCATGAAAAA              GGGCGCC TCC GGCGCCC              TTTTTCATGTGGGCA 100 52
        radA  966440 ..  966477 +    -9  -2.90714   GAATTCGATCGGCGG   TGCCGTCCGTCCCCGCC TGTGC GGCTGGATCGG-CGGCA   TGTGTCCGAGTTTGA  58 492
HR116_RS04315  967087 ..  967102 + -11.8   -4.8048   CAGGCCCAGGAAAGA              GCCCGC TACG GCGGGC               TTTTTCGTGTGCGCG 100 46
HR116_RS04320 NONE
HR116_RS04325  969734 ..  969764 + -16.8   -4.4017   CTGAATCCCCATCCT       TCCGCGGGCCACGT CTG ACGTGGCCCGCGTC       TTTTCTGGAAGTTGC 100 37
        yjiA NONE
HR116_RS04335  971221 ..  971252 + -15.2  -3.18321   CTCCCTCGGAGGAAA      TGAAAAAGCCCGGC ATTT GCCGGGCTCTTTCG       TCTTGCCTTGTCGCT  83 57
        mexC NONE
        mexD NONE
        oprJ  983665 ..  983689 +  -9.3  -2.58579   GCTAGCGGGTGGCAA         CTGCC-GCCC GCTCAA GGGCTGGCAG          GTTGTGCGGGGTTCG  56 65
        ettA  986368 ..  986394 + -20.8   -5.1675   CGCGCCCTCGAGAAA         CCGCCCGCCGGC GTT GCCGGCCGGCGG         TTTTTTCATGCCTGG 100 42
HR116_RS04385  987536 ..  987566 +  -5.4  -2.60075   GACCTGGCGGAGGCC      TGCCGGTGAGCGCC AGCCC GTCGC-C-CCGGCA      ATTGCTTCACGAGGC  43 17
HR116_RS04390 NONE
HR116_RS04395 NONE
HR116_RS04400  991535 ..  991551 +  -5.7  -4.15044   CAATTCTGGTAGGTA              CGCCCCG TCA TGGTGCG              TTTCTTCCCGACGCG  67 85
HR116_RS04405  992570 ..  992594 + -22.9  -3.57263   CCGTAATCCGGGCTG          CCGCTGGCGCC CTC GGCGCCAGCGG          TTTCGCGCTCCCGCT 100 35
HR116_RS04410  994233 ..  994258 + -21.9  -3.63627   CCGTAGGTAGAGGAA         GGGCCTCCCCC TGGC GGGGGAGGCCC          TTTCGCATCTGGCGC 100 47
        gdhA  995850 ..  995902 + -22.4  -3.61398   CGTGGTCTGAGGTCG TC-CCATAGAGGAAAAACGGGGCTCC AGG GGAGCCCCGTTTTTCCT-TGTGGCGG TTATTCCGCGGGACG 100 31
HR116_RS04455 NONE
HR116_RS04460 1004824 .. 1004838 +  -8.5  -3.31792   ACGAAGCCCAGGCTG               CGGCG CACTT CGCCG               TTGTGGAAGTAGTCG  58 152
HR116_RS04475 1007660 .. 1007672 +  -6.2  -2.61264   TACATCGGTGAGATA                GCGC CATCC GCGC                CTTGTCAGTGGCGCG  46 30
HR116_RS04480 1010229 .. 1010265 + -22.4  -3.56643   CGCGTTGCCGGAACC   TGC-CGAGGGCGGGGCT GGAA AGCCCCGCCCTCGTGCG    TTTCAGCCCTGTGGA 100 47
HR116_RS04485 1010813 .. 1010826 +  -3.7  -3.40403   TTTCTGGATAAAAAC               CGCCG GCCG CTGCG                TTATACTCGCCGCCC  51 139
HR116_RS04490 1011384 .. 1011422 + -22.5  -3.61536   CTCCAGTGTTTCGCT  CG-CGCCGCCCGGCCGTT GTAA AACGGACGGGCGGCGGCG   TTTCCGGCTTGCGTT 100 48
HR116_RS04495 1011950 .. 1011960 +  -5.4  -2.79796   TGCGCTGGTAGGGGG                 GAAG GGC CTTC                 TGTGCTAGGCTGGCC  44 52
HR116_RS04500 1012654 .. 1012679 + -20.5   -4.8622   CAGGAAGGAGCGAAA         CGCCCCGTCGA CGCA TCGACGGGGCG          TTTTTCATTGCGGCA 100 54
        rplU NONE
        rpmA 1017248 .. 1017267 + -11.4  -5.72622   TAGCTCGCTGAAAAA            GCCCTGTC TCGC GACGGGGC             TTTTTTGTTTCTGCG 100 45
        cgtA 1018568 .. 1018582 +  -4.2  -3.09834   ACGACGGCGACGGTC               CGGAGA TCT TCTACG               TTCCCTGATGGCGTG  45 3
HR116_RS04535 NONE
HR116_RS04540 1020283 .. 1020297 + -12.8   -5.4505   GTGGGCAATAAAAAA               CCGGCC ATT GGCCGG               TTTTTTATTCGAGCA 100 53
        murJ 1022436 .. 1022451 +  -3.9  -4.30441   GCGCTTCCGGGCTGG              CGGCG GGATCA TGCCG               TTTTGCCTGTTGTCC  66 42
        ribF NONE
        ileS NONE
        lspA NONE
        fkpB 1027251 .. 1027291 +  -4.6  -3.40371   CCGGCCTGAACCGTC GGTCGCTGC-GCCCTTCCC AAGC GGGGAGGGCGGTAGCAAGG  TTCATTCGTCCAATC  53 32
        ispH 1028291 .. 1028313 + -17.8  -4.05788   CCGTGCGCAATAAAA           GAGCCCCTCT CGT AGAGGGGCTC           TTTCGTTTCAGCGCC 100 42
        thiO 1036915 .. 1036934 + -13.6  -4.36595   GAGCGAAAACCAAAA            GGCCTGTC TTCG GACAGGCC             TTTTCACTTTCAGTC 100 42
        rluD NONE
        pgeF 1043247 .. 1043257 +  -2.4  -2.71011   GGGCTTTTCTTCATC                 AGGG ACA CCCA                 TCGTTCCGGCCCGCT  39 134
        clpB 1045883 .. 1045900 + -14.1  -4.72986   GGACGGACAGGGAAA             GCCCCGC TTCG GCGGGGC              TTTTTCATGGGCGTC 100 50
HR116_RS04660 NONE
HR116_RS04665 1046256 .. 1046267 +  -2.2  -2.75712   CTCTACCCCGACCAC                CTCA TACT TGGG                 TCGTTAGCTCAGTCG  39 27
HR116_RS04670 1046357 .. 1046376 + -13.6  -5.07011   ATTCAAGACGAAAAA            GCCCACCT GCGA AGGTGGGC             TTTTTCGTTTCTGTA 100 42
HR116_RS04685 1054586 .. 1054617 +  -9.4  -3.40639   AAGATGTCGTCGTCG      CGGGTGGTCTGC AGGGTCGG GCGGACCACCAG       TTGGTTGATACGGTT  63 462
HR116_RS04710 NONE
HR116_RS04715 NONE
HR116_RS04720 1058566 .. 1058624 +    -3  -4.09685   CATTCGCCAGGTTCA TGGC-GGGCGGCGGCTGACTTGCGTCAG TGTTT CGGACG-AAGCTGGCCGCGATCCTGCCG TTTTCCCAGGTGAGG  58 49
HR116_RS04725 1058863 .. 1058887 + -19.3  -3.19668   GCGTCCCTGAAGGAA          CGGGCCAGCCG GAT TGGCTGGCCCG          TTGCGTTCAATGCTC  93 31
HR116_RS04755 1064229 .. 1064243 + -12.8  -5.26875   TGGTAAAAGAGAAAA               CCCCGC ATT GCGGGG               TTTTTTCATTACGGA 100 63
HR116_RS04760 1065682 .. 1065720 +  -5.1  -3.08133   GAATATCGGTTGAAA   TCCGGCTGTGCCGAG TGATACCTT CCCCGCGCCGCCGGA   TTAGCTCAGTCGGTA  47 45
HR116_RS04765 1065804 .. 1065821 + -14.1  -5.10461   CAGTCGCAATAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTATTACCTGCG 100 39
HR116_RS04775 1069254 .. 1069273 +   -15  -5.09762   TAGCCGCTTCTCGAG            GACCCGGC GGAT GCCGGGTC             TTTTCTTTCTTGCGG 100 38
        ampD NONE
        ampE 1070926 .. 1070943 +  -9.1  -2.87344   GACTCCGTGCGTCAA             TGTCGCC ACGC GGCGGCA              TCTCTCAGAACGATA  58 160
HR116_RS04790 1072989 .. 1073023 +  -3.6   -4.7497   AACGCCTGATCGGCG    CGTTCCGGGTGTAGGC GCAAG GCCTGCGC--GGGACG    TTTTTCGTCCATCCG  73 12
HR116_RS04795 1074641 .. 1074658 + -14.1  -4.81551   CCTCTGTTACGAAGA             GCCCCGC CTCG GCGGGGC              TTTTTCATGTCGCTC 100 49
HR116_RS04800 1075178 .. 1075198 + -13.9  -2.60075   GCTACGGATGGAAAA            ACGCCCCGC TCG GCGGGGCGC            ATTCCTTGGCGGCGG  71 45
HR116_RS04820 1081180 .. 1081205 + -12.6  -3.55444   TCGCTCCCCACGAAA         GCCCCATTCC CTCTAC GGGATGGGGC          TTTCCCGCATCCAGG  77 50
HR116_RS04825 1083940 .. 1083955 + -10.4  -4.41047   CGGATGAATGAAAAA              GGCTCC CAAG GGAGCC               TTTTCGTTGCCAACT  95 42
HR116_RS04835 NONE
        pxpB NONE
HR116_RS04845 1087941 .. 1087981 + -15.3  -3.14132   GGTCGACCACCGCAC  GGTGGAAGGCCTCGGCCTG CTC CTGGCGGTGGCGTTCCACC  TTGATCCCGACGAAC  78 248
HR116_RS04855 1089317 .. 1089336 +  -9.2  -3.30124   GGACGTCGTCGGCGA            CATGGCGG ACCA CCGCCAGG             TTGTGCGAGATGAAC  61 372
HR116_RS04900 1100427 .. 1100444 +  -2.6  -4.08216   TCGTCGAAGCCCTTG             TCGCAC CAGCGC GCGCGA              TTTTCCCCGGACTCC  58 310
HR116_RS04920 1106037 .. 1106049 +  -3.3  -2.87564   GAGTGATCCGTCTGA                GAGGC CCT GCCTA                TGTCTGAAGAGCTGC  42 39
HR116_RS04925 1106624 .. 1106647 + -17.4   -2.9587   AAGCGTAAATGACAA          CGGGGGCGCC GCAT GGCGCCCCTG           TGCTTTCCGCTTTCC  87 40
HR116_RS04930 NONE
HR116_RS04935 NONE
HR116_RS04940 NONE
HR116_RS04945 NONE
HR116_RS04950 NONE
HR116_RS04955 1117225 .. 1117252 +  -2.7  -3.73224   GGCACCCCGGCATAG       ACCGCGCAGTGCA GCAG TGC-CT-CGCGGA        TTTCCTCCACCGTGC  53 208
HR116_RS04985 1122606 .. 1122622 +  -3.6  -3.21276   CATCGTCGCCTAGGA              GCGGAT CATCA AACCGC              TATTCTCCAAAGGCC  44 50
        mreC NONE
        mreD 1124204 .. 1124219 +  -4.6  -3.53224   GAAACGGGTGATCGG              CGCATC GCCC GACGCG               TTTCCCGGGAGCCTC  53 82
         maf NONE
         rng NONE
HR116_RS05010 1130188 .. 1130204 + -11.5  -3.72576   GCTGAGCGGCGCCCG              GTGCCGC GAC GCGGCGC              TTTCGTCCGCAAGGA  76 36
HR116_RS05015 NONE
        tldD 1132550 .. 1132570 +  -8.2  -3.76492   GCCGGCGCGGCGAAA            CCTAGCGC AGGCC GCGCTTGG            TTTCGTCCAGTTCGC  69 55
        pmbA 1134546 .. 1134566 +   -14  -4.55128   TTTCCCTCTATAAAA            CGCCAGCG CTCGT CGCTGGCG            TTTTCGTTTCCGCCT 100 48
HR116_RS05035 NONE
HR116_RS05040 NONE
HR116_RS05045 NONE
HR116_RS05050 NONE
HR116_RS05055 1138544 .. 1138559 + -11.8  -4.71061   CGCCGGAAAGGAAAA              GCCGCC AGTT GGCGGC               TTTTTCGCTGTCGCT 100 82
HR116_RS05110 NONE
        mlaE NONE
        mlaD NONE
HR116_RS05125 NONE
HR116_RS05130 1149148 .. 1149192 + -23.6  -5.39721   CCGGCGGAACGAGCG GCCCTCCGTCTGCGCGTCCC TTCCT GGGGTTCGCAGGCGGAGGGC TTTTTTGTATGATGG 100 45
HR116_RS05135 NONE
        murA NONE
HR116_RS05145 1151483 .. 1151497 +  -9.2  -3.24747   CAAATTTTCTCGGGT               GCCCGC ACG GTGGGC               TTGGTAGTCTAGCGG  61 85
        hisD NONE
HR116_RS05155 1153938 .. 1153955 + -14.1  -4.18018   CAAGTGATACGAAAA             CGGCGCC CGAG GGCGCCG              TTTTCAATGGCGGGG  93 34
HR116_RS05165 1156472 .. 1156488 +  -2.1  -3.34013   TAGGAACCGCGCAGG              GCCAGCG GGT CGGTGCC              TTCCTTGCGCGCCTG  44 481
        cysD NONE
        cysN 1160303 .. 1160320 + -14.1  -4.72986   CGCAGCCATGAAAAA             GCCCCGC GGAT GCGGGGC              TTTTTCATGGGCGTC 100 47
HR116_RS05190 1161579 .. 1161612 +  -3.7   -4.5493   CTGCAGGACTGACGT     CGTCGCGCCGG CCCTGCTACCAT CCGGCGCGCCA      TTCTTTTCTTTGCCT  72 29
HR116_RS05195 1163033 .. 1163060 +   -17  -4.45664   CCGATTGCCAAGAGA        CGGGGTCGTCGC TAAA GTGACGGCCCCG         TTTTCGTTGCATTGC 100 69
HR116_RS05200 1164199 .. 1164219 + -16.9  -5.14563   GGCGGAAACGAGAAA            GGGGTTGCC GAT GGCAACCCC            TTTTTTCATGGGCGC 100 46
HR116_RS05215 1167731 .. 1167759 + -10.9  -3.20723   GAACCCGCGGCAGCG        CCAGGCTCCTGGA GCC TCAGGGAGCCGGG        TTCGGTTGCTCCCGG  67 94
        rplM NONE
        rpsI 1169885 .. 1169908 + -12.4  -5.76633   ACGCTTGCTGAAAAA          CGCCCACCTC TTCG GAGCTGGGCG           TTTTTTTATGTCTAC 100 45
        petA NONE
HR116_RS05240 NONE
HR116_RS05245 1172719 .. 1172748 + -20.7  -4.13767   CGCACGTTGGTCTTC       GAAGCGCGCGCCC TACG GGGCGCGCGCGTC        TTTTCACCTCCCACA 100 43
HR116_RS05250 NONE
HR116_RS05255 1173842 .. 1173859 + -11.3  -5.64006   GCGAGCAATGAAAAA             GGCGATC GAAG GATCGCC              TTTTTTTCGTTCGCT 100 44
        rsmI 1178259 .. 1178284 +  -6.1  -2.52896   TGTTCTTCGCGCCTG         CTC-CCGCTAAC CTT GTCGGCGGAGAG         TCGATTGGACAGTCG  45 44
        rnpB 1178810 .. 1178820 +  -5.4  -4.78149   CACGCTAAATCTCCG                 TCCT GTA AGGA                 TTTTTCACTTCTGAC  78 205
        mraZ NONE
        rsmH 1180338 .. 1180352 +  -6.4  -3.14344   CGTGGCGGAGAAGCT               GAGATG AGC CGTCTC               TTCGTCAAGCGCCTG  53 19
        ftsL NONE
HR116_RS05305 NONE
HR116_RS05310 NONE
HR116_RS05315 NONE
HR116_RS05320 NONE
HR116_RS05325 NONE
        ftsW NONE
        murG NONE
        murC NONE
HR116_RS05345 NONE
HR116_RS05350 NONE
        ftsA NONE
        ftsZ 1195716 .. 1195743 +  -3.2  -3.61894   ATTGGTGTTCAGCAA        AGGCCGGTTCTG CTAT CATCGCCGGCCA         TTGTTGAAAACAGTT  51 67
HR116_RS05365 1196722 .. 1196743 + -15.9  -5.27938   TCCTTTCCATATTTG           GAGGCCACC TCAG GGTGGCCTC            TTTTTATTTCGGGAT 100 49
HR116_RS05375 1198222 .. 1198234 +  -3.3  -3.31537   GCGTCTGTTTCCGAG                TGAGC GAC GCGCA                TTGATCTGCTGTACT  46 23
        secA 1201130 .. 1201158 + -18.1  -4.20918   CGCCTGGTTCACCAA        CGCCGCGACCGGT CCT GCCGCTCGCGGCG        TTTGTTCGAATTGGC 100 47
        argJ 1202482 .. 1202514 +    -5  -2.76492   ACCTGAAGCCAGGCA     TTCCGATCCTTCATC GATG GATGAAA-ATCGGGA      ATTTGCCATCGGTCC  44 35
HR116_RS05390 NONE
HR116_RS05395 1204246 .. 1204261 + -10.4  -5.22312   GGAATGAAGAAAAAA              GGAGGC TTCG GCCTCC               TTTTTTCGTCTCGAT 100 45
HR116_RS05420 1209743 .. 1209776 + -20.4  -3.25823   CGTTGTCCGCCCCTG     TCGGCGCAGCGTCGG TTCGT CCG-CGCTGCGCCGA     TTCGTATCCAGGCCC  95 111
HR116_RS05425 1210749 .. 1210766 + -14.1  -4.93365   GCGATCCACGAAAAA             GGCCGGC GAAT GCCGGCC              TTTTTCATTCTCGCC 100 48
HR116_RS05440 1214057 .. 1214081 +   -10  -3.01791   GGTCCTTGCTCTGCC          GCCCGGCATT TGGAT AATGCCGGCC          TCTTCGAACCCAACT  62 90
HR116_RS05445 1215133 .. 1215150 + -14.1   -4.8622   GGCCTGCACGAAAAA             GCCCCGC GATA GCGGGGC              TTTTTCCTTGCGGGG 100 44
HR116_RS05455 NONE
        fxsA 1217378 .. 1217396 +  -5.9  -3.07013   CGGTCACCGCAAGGT             CCCTGCC ACAAG GGCAGGC             TGTCTTACGCGGCTC  49 93
HR116_RS05465 NONE
        groL 1219521 .. 1219538 + -14.1   -5.5112   CCTGTGGTTGGAAAA             GCCCCGC TTCG GCGGGGC              TTTTTTATTCCTCAG 100 52
        crcB NONE
HR116_RS05485 1221180 .. 1221190 +  -6.8  -3.14463   GGCGTGCTGGGAGCG                 GACG AAT CGTC                 TTCCTGAACGCGGTT  53 8
HR116_RS05495 NONE
HR116_RS05500 NONE
HR116_RS05505 NONE
HR116_RS05510 NONE
HR116_RS05515 1225831 .. 1225848 + -14.1   -4.7254   CTCCTTGTCGAAAAA             GCCCCGC CTTG GCGGGGC              TTTTTCATGGGCGAT 100 43
HR116_RS05555 NONE
HR116_RS05560 1238875 .. 1238918 + -10.3  -3.14211   CGGTCTCGGTGACTT CCAGCTCCAGG-CTGCGCGCC GGCA GGCG-GTAGACCTGCAGCAGG TTGCTGACCACCCGT  62 448
HR116_RS05585 1243860 .. 1243894 +   -10  -3.87815   ACCCAGGTGCGCAGG    CGC-TCGCGGGCCGCC TGGTC GG-GGCCGGCGATGCG    TTTGTCGACCTGCCC  74 255
HR116_RS05595 1245979 .. 1246037 + -11.1  -3.15663   CGCTGTCCCAGCTCC CGCGTCGTCGCATCGCCG-GA-GCGGGCG CAGGC CGCCTGCATCGCGGCGAT-CG-CATCGCG TTGCTGGAAGTGGAT  64 141
HR116_RS05605 1247293 .. 1247329 +  -7.2  -3.22521   TCGCACCGGGCGCTG   GCGGCGACAGTTCGCCG CGCC CGGCGAAAA-TCCCCGC    TTCCATTGCTCTGGA  56 64
        feoA NONE
        feoB NONE
HR116_RS05620 1250272 .. 1250300 + -21.8  -3.18264   GACGGGCAAAGCACA        GAGCCCGCCACG GCAAG CGTGGCGGGCTC        TTCCTGGCTGGCGCG 100 40
HR116_RS05640 1253739 .. 1253753 +  -7.8  -3.05384   CACATCAACCGGCAG               CGGTCG CGT CGATCG               TTCAATGGGGCCGAC  54 116
HR116_RS05645 1254655 .. 1254671 +  -5.7  -3.64703   GCCGCCCAAGCGCGA              CTAGGCG GCG CGCCGGG              TTTGCGTAGGGGCGG  57 22
HR116_RS05660 1257305 .. 1257357 +  -3.2  -2.71924   CCGCGCCGCAGGCGC TTACCCTGCGCAGCATCCGGCGAG GAATG CTCCTCGGCGCCTGCACAGAGTAG ATTTCACCGACCATG  40 45
HR116_RS05665 NONE
HR116_RS05670 1259321 .. 1259352 +  -7.2  -3.41978   CAGGCGGCGTTCGCC      GGGGAGGCG-CGG CCATGAT CCGTCGCCATCCC      TTGCTCTTCCTGTTC  60 8
HR116_RS05675 NONE
HR116_RS05680 1260349 .. 1260372 +    -6   -3.2653   GGGCGGCGCGGGCCT          TG-GGTTCCAC CCA GTGGAACCGCC          TTCCGTTGTCCTTCG  52 53
HR116_RS05685 NONE
HR116_RS05690 NONE
HR116_RS05695 1264563 .. 1264577 +  -2.1  -2.83867   GGCCGCGGAGCAATG              CTGGCG TATT CGC-AG               ATTCTTCCTACATGA  40 40
HR116_RS05700 1265439 .. 1265449 +  -2.4  -3.59979   GAGTTTGCCTGCTCC                 CAGG CGG CCGG                 TTTAAGGTGGCGCCG  49 46
HR116_RS05705 1266030 .. 1266064 +    -4  -3.40597   CGGTGCCGGTCGGCG     CCGTGCTGATCTTCAC TTC GCGGTGAGCGGCCCGG     TCTTTCCCTGGCGCA  51 0
HR116_RS05710 1267201 .. 1267219 +  -6.7  -3.14931   AATTTCCTCGACCGC            CGG-CGCT AGGG AGCGGCCG             TTCGTAGCCGCTGGC  53 17
HR116_RS05715 1268582 .. 1268594 + -10.5  -3.28712   CCAAGGTGCCGCGCC                CGGCC TGA GGCCG                TTCTCCCGGAGAACC  66 18
HR116_RS05720 1269296 .. 1269306 +  -2.4  -2.79501   AGATCGGCATCTGAA                 CCCG GCA CGCG                 TGTAGTAACCGTCTA  39 27
HR116_RS05725 NONE
HR116_RS05730 NONE
HR116_RS05735 1271759 .. 1271777 + -13.1  -4.56597   TGGCCGTACGAAAAA             GCCCGGC GCGGG GCCGGGC             TTTTTCAGGGACGGA 100 81
HR116_RS05745 NONE
HR116_RS05750 1275651 .. 1275663 +  -4.7  -2.52795   CCCACGCCTGACGCG                GCGCC GGT GGCGG                TGCCTTGCAGCCATT  43 30
HR116_RS05755 1276700 .. 1276730 + -18.4  -2.69964   GGGTGCCGCTCCGTA       GGGCGAATAACGCC ACA GGCGTTATTCGCCG       TGATGTGGTTGAAAC  86 240
HR116_RS05775 NONE
HR116_RS05780 NONE
HR116_RS05785 1281835 .. 1281872 +  -4.7  -3.53012   AGCACTTCCTCGCGC   AGGCT-GGCGACCAGCAC TCG GTGCTGGCGGCCCAGGCG   TTTCACCGCGCCGAG  52 247
        sbcB 1291037 .. 1291055 + -11.7  -3.72324   GGCGGAAATGAAAAA             CGCCAGC ACTGG GCTGGCG             TTCTTCGTGGAACTG  78 70
        purU NONE
HR116_RS05840 1293147 .. 1293158 +  -7.2  -2.90496   GCTGAGAAGGAAGAC                CGCC AGCA GGCG                 TCGTTTCGGCAGGCG  50 348
HR116_RS05870 1301908 .. 1301923 + -11.8   -4.7254   CCAGGCCATGAAAAA              GGCGCC CGCG GGCGCC               TTTTTCATGGGGGCT 100 44
        rcpC NONE
        rcpA NONE
        tadZ NONE
        tadA 1309316 .. 1309372 +  -6.8  -3.53811   TCGGGCAGAAATTCC GCCAGGCGCTGCTG-TGAACGGCGCGCA ACTGC TG-GTGCTGTTCAGCGGC-GTG-CTGGC TTTCGCCGCGCTGGC  59 9
        tadB NONE
        tadC NONE
        tadD NONE
HR116_RS05920 NONE
        tadG 1314131 .. 1314180 + -13.5   -3.1855   AGCGGATTGCTCGGG GACACCTGGCTTTCCGCGACCGAC GCC GGCGG-CGCGGACGGCTGGCTGTC TTCGCTCTTGAGGGC  72 286
HR116_RS05940 1315892 .. 1315906 +  -2.1  -3.15366   GTGCCAACCTGTTGC               TGTGA GGTGG TCGCA               TGTTCGAATTTTCCC  43 21
HR116_RS05945 1318704 .. 1318723 + -10.7  -5.00616   CGGCAGGAAAAAAAA            CGCCTGC GGACAA GCAGGCG             TTTTTTCAACCGGCG 100 55
HR116_RS05960 1322858 .. 1322872 +  -3.4  -3.14132   GACCCCGGCCAGCGT               TGCCCG TAC CCGGCG               TTCGTGGCGCAGGCG  44 226
HR116_RS05975 1325694 .. 1325708 +  -6.4  -3.53761   CCGGCCCGTCTGCGC               TCGGCA ACC TGCTGA               TTTCCCGGCAACTTC  57 11
HR116_RS05980 NONE
        recC NONE
        recB NONE
        recD 1336438 .. 1336454 +  -4.3  -3.33696   CGGAACTTGTCGCCG              CTGGACG AAC CGATCAG              TTCGTTCAGGCGGCC  49 507
HR116_RS06010 NONE
HR116_RS06015 1343198 .. 1343208 +  -5.4  -2.81464   ATCTGCCCAGACCCA                 CCAA TTG TTGG                 TGTGCTGCGTGATCC  44 23
HR116_RS06020 1343326 .. 1343363 + -10.1  -3.34398   ACAATCGTCGAAAGC   TCAGAAATGAATGTTCG TGGA TGAACATTGATTTCTGG    TCTTTGCACCAGAAC  66 47
HR116_RS06025 1346430 .. 1346451 +  -5.9  -3.33162   TGACCATATAACACC           CAAACAATC TGAT GATTGTGTG            TTGTAAGGTGAAGTC  52 20
         rrf 1346688 .. 1346723 + -19.2  -4.07568   CGTCAAGCTCCTATC    CCAAAACCCCTGGTCA GCGA TGACCAGGGGTTTTGC     TTTTGCGCGCGGAAA 100 33
HR116_RS06050 1353033 .. 1353052 + -12.1  -5.47159   CGCCGACGACGATTG            CCCCGGC CTGGTT GCCGGGG             TTTTTTGTCTTGCGC 100 76
HR116_RS06060 NONE
HR116_RS06065 1354851 .. 1354869 +  -4.5  -2.91582   CCGTCATAAGCATAA            GCAGGTGG AAAA CCGCC-GC             TATATCCCTCCCATG  44 32
HR116_RS06070 1355954 .. 1355969 + -10.4  -3.76224   CCAGGCTGATCTCCA              GTCCGC TGGC GCGGAC               TTTGCTGCGTGCCGG  74 106
HR116_RS06085 1357626 .. 1357654 +    -3  -3.63515   ATTTCCACCCACAGT       AGCG-CGGGGTCG TCGG TGGCCTCGACGCG        TTGTTCGCAGTACAA  53 116
        gspG NONE
        gspK NONE
HR116_RS06105 NONE
HR116_RS06110 NONE
        gspD NONE
        gspE NONE
        gspF 1366524 .. 1366541 +  -9.1  -3.28912   CCGCCCTACGGGAGG             GGCCTGT GCAA GCAGGCC              TTCCTCTCGCTGTCA  63 165
HR116_RS06130 1368033 .. 1368058 + -20.5  -5.55769   GCGAATCGATACGAG         GACCGGCAGCC CTGT GGCTGCCGGTC          TTTTTTCTTGTGGGG 100 54
HR116_RS06135 1369302 .. 1369324 +  -4.1  -3.21099   CTACCAGTAACGGGC          GTCGTTGCGG GCGC CCG-ACCGAC           TTCATGCTCAAGGAC  47 137
HR116_RS06140 1381921 .. 1381942 + -11.5  -5.75945   GGCACGATACCCGCC           AGGCCCTCC CCAC GGAGGGCCC            TTTTTTTTGCGAACT 100 55
HR116_RS06145 1382988 .. 1383002 +  -3.5  -3.73068   GTCTTTCACAGAACT               GTTCG ATGAA CGGAC               TTGTTGCATTAGAAC  54 128
HR116_RS06150 NONE
HR116_RS06155 NONE
HR116_RS06160 NONE
HR116_RS06165 NONE
HR116_RS06170 NONE
HR116_RS06175 NONE
HR116_RS06180 1390713 .. 1390733 +  -5.4  -2.94032   CCCGTCGATGGCGAG           GCCTGAGCCG ATG CGGC-C-GGC           ATTTCGTTGCGGCAT  46 20
HR116_RS06185 NONE
HR116_RS06190 NONE
HR116_RS06195 1393103 .. 1393126 +    -3  -3.53012   ACCTTGCGGGCTTGA          CGGCGGTCGCC ATA GCCGACA-CCG          TTTCGCCACGGAACG  49 40
HR116_RS06200 1393932 .. 1393947 +  -3.2  -2.62263   TAGTCAGGCTGGTCG              CCGATG CCCA TGTCGG               TGCTGTCCAGGCGGT  39 132
HR116_RS06240 NONE
        gloA 1402425 .. 1402436 +  -5.8  -3.13522   GGCGTCGAATGCGGC                GTGG AAGG CCAC                 TATTCCTCGCGCCAT  51 93
HR116_RS06260 1404049 .. 1404068 +  -3.4  -4.07568   GCATACCTGAAAAGT            TGGCGGCG TAAT CTCCGCGA             TTTTCAGGCGAGGAC  58 217
HR116_RS06265 1404659 .. 1404686 + -15.6   -4.2803   GCCTGAAAACAGAAA        GCCCCTGGCACT GGTT GGTGTCAGGGGC         TTTTGCATTGGGATC 100 119
HR116_RS06270 1406116 .. 1406133 + -14.1  -3.65522   CGACACCAAGAAGTA             GGGCCGC TCAC GCGGCCC              TTGTTGGCGTCCATC  81 25
HR116_RS06355 1416964 .. 1416980 +  -4.3  -3.37344   CTGCTGCGGTTGGCG              TGCGCTC TCA GGGGGCA              TTGATTGAATGGGCC  48 270
HR116_RS06360 1417553 .. 1417569 +  -5.8  -3.86346   AGATAGTTCTGCCGC              TTCGCG GGCAG CGCGGA              TTTCTGCGGGACTGG  60 191
HR116_RS06500 NONE
HR116_RS06505 1439651 .. 1439669 + -10.3   -4.1413   GCGAGGCAAAAAAAA             GCCCTCA CTTGA TGAGGGC             TTTTACGAATCTCTT  81 57
HR116_RS06560 1448285 .. 1448333 +  -5.2  -3.91357   TCCGGCCGGTCGGCA GCGGGGC-CGCAGGAGGCTGC CATGTGGC GCACATTCCTGAGAGTCCCGC TTCTTCTGCTTCTCG  60 100
HR116_RS06565 1448772 .. 1448801 + -11.3  -3.60098   ACTGAGGTGCGCAAG       GAAAGGCGGCGCC TGCG GGCGCCGTCGTGC        TTTCCAGTCGAAAGT  73 36
HR116_RS06570 1449239 .. 1449253 +  -3.4  -4.08887   CCGGAACCGCACAGG               AGGCGC CAT GCGTCG               TTTGCTTTCCCTGCT  58 141
HR116_RS06575 1449425 .. 1449459 +  -9.1  -2.73875   CCGCGACGACGCTCG     CTGGCGCTGAGCCTC AGGTG GCGGCGAAGCGCCGG     TCCTGTTCCAGCACC  57 16
HR116_RS06585 1452433 .. 1452462 +   -10  -4.18018   AGTCCGAAGGCTGAC       GACGAAGGCGCCC GAGAG GGGCGCCTG-GTC       TTTTCAGTAGGCCAC  81 27
HR116_RS06625 NONE
HR116_RS06630 1461557 .. 1461567 +  -2.4  -4.42788   TCCCGAGATTGACAA                 GCGC GGC GGGC                 TTTTCTACGGTTCCG  65 29
         ung 1462354 .. 1462366 +  -4.8  -3.07043   GGACCTCTGAAGGCC                GCTG TCGCC CAGC                TCTTCACATGGTGGG  47 31
HR116_RS06665 NONE
HR116_RS06670 1470274 .. 1470292 +  -8.8  -2.78384   TAGCTCTGCAGGGTG             GCGACCTG GAC CAGGTCGG             TATAGTCCGCGCGCG  52 194
HR116_RS06685 NONE
HR116_RS06690 1473158 .. 1473170 +  -6.9  -3.71848   TACCCGGTGCTGGGC                GCGCT GCA GGCGC                TTGTTGGTGCGCACG  61 225
        rpoE NONE
HR116_RS06705 NONE
HR116_RS06710 NONE
HR116_RS06715 1477549 .. 1477563 +  -2.8  -4.21607   ATTTCCGGGCCGTCC               GATTCG GCC TGAGTC               TTTCTCTTCCCTCGA  61 14
HR116_RS06720 1479042 .. 1479059 + -12.7  -4.72986   CGGCTGGCGAAAAAA             GGGCGGT TTCC ACCGCCC              TTTTTCATGCCCGTC 100 43
        lepA NONE
        lepB 1481886 .. 1481913 + -20.6  -3.75153   CTGAATAATCGCGAA        GCGGGGCTGCTC CCGA GGGCAGCCCCGC         TTTCACTTCCGCGAA 100 78
HR116_RS06735 NONE
         rnc NONE
         era NONE
        recO NONE
        pdxJ 1485533 .. 1485550 + -11.3  -3.63805   AAAGCATGAAAAAAA             GCCCATC CGAG GATGGGC              TTTACCCTATCCGCT  73 82
HR116_RS06790 1493217 .. 1493237 +  -3.2   -3.9461   AGCGGGGCGATGCGT           GG-CAGCGG TTCG CCGGTGTCC            TTGTTCTTGGCGCGG  58 453
        putA 1498624 .. 1498654 + -16.1  -3.57561   ACGCCGAGTGATACT      CCGTTCCCGGGCGC CTTG GCGCCCGGGT-CGG       TTTCCGGGGTTCGCC  91 30
        putP 1500487 .. 1500518 + -17.2  -4.37092   AGCGCCCGCGCATGG      AGACGGCCCGCCCC GCAA GGTGCGGGCCGTCG       TTTTGTCCGGCGGCT 100 61
HR116_RS06815 NONE
HR116_RS06820 NONE
HR116_RS06825 1504073 .. 1504099 +  -4.3  -3.30124   GAACTGCGCACGTGG         CCGCCGGCG CTGAAGGTC TGCAGGCGG         TTGTCGCCGGTGCCG  49 274
HR116_RS06835 1507626 .. 1507666 + -13.2  -3.16683   GAACCTATGACGCCC CGTCGTCGCCCGCTGTGCG GTAT CGCGCAG-GGGCCGCGCCG  TTGGTGAAATCCGCT  73 333
HR116_RS06840 1509190 .. 1509207 + -12.7  -5.26875   GCCGGAAAAGAAAAG             GGGCCTC GGAC GAGGCCC              TTTTTTCGTTGCGCC 100 51
HR116_RS06850 1511108 .. 1511123 +  -6.8  -2.52464   TTGGCCTTGAACTTC              TCCTGC AGCA GCGGGA               TGCCTTCGGCGCGCC  47 133
HR116_RS06885 1520360 .. 1520379 +  -4.9  -4.30576   TGCCTTCGCTGAACA            GGCCGTT GGCGAG GGCGGCC             TTTTCCTGCTGCAGG  69 125
HR116_RS06895 NONE
HR116_RS06900 NONE
HR116_RS06905 NONE
HR116_RS06910 1525574 .. 1525590 +    -5  -2.52464   CGGCAGCTATGATCC              CTGGGC ATGAG GCCCCG              TCCATTCACCACAGG  43 16
HR116_RS06915 1526594 .. 1526612 +   -16  -4.45664   CTGTCCCACAAAAAA             GCCCCGTC GGG GACGGGGC             TTTTCCTTGCATTCG 100 183
HR116_RS06925 1528289 .. 1528307 + -13.1  -5.24531   TGGTGTATCCCTTTT             GCCCGGC CGCGT GCCGGGC             TTTTTTATGCCCGGT 100 485
HR116_RS06930 1529238 .. 1529261 + -16.7  -3.33696   AGCCACTAGCCACGA          GCGGCCGCC CGATGC GGCGGCCGC           TTCCTTGCCCACCCC  88 40
HR116_RS06935 NONE
HR116_RS06970 1537733 .. 1537762 +  -9.1  -3.05816   GCGGCTGACCATCAC       CAGCTCGCGCTGG AATT CCAGCGCGCCCAG        TTCGATCACCCGTAC  57 106
HR116_RS06980 1539147 .. 1539195 +  -5.9  -3.70068   TTTCTTGCGCACCAC GCTGCCCAGCGGCGCCAGCTTGA ACCGC TCCGGC-GGCGG-GCTGGCCGGC TTTGCGCTTGTGGTC  59 137
HR116_RS06990 1539894 .. 1539914 +  -3.1  -3.44319   TCTGTGCCGTACTAT            CCGCCTTGT CTG GCTAGGCTG            TTGTGGTGAATTGGG  49 144
HR116_RS06995 1541033 .. 1541048 +  -3.2  -4.36914   GTCGCGTCCAGGTAA              GGCTCA GCGC TGAGCA               TTTTGTCGCGCCACC  66 172
HR116_RS07035 NONE
HR116_RS07040 1548311 .. 1548333 + -11.3   -4.7497   GGCCGTCATGAAGAA          GCCCGCG-CT GGTC AGTCGCGGGC           TTTTTAATGCGTGGA 100 46
HR116_RS07050 1550442 .. 1550455 +  -4.5  -3.73775   GGCAGCGGATGGATG               TGCCA TGCT TGGCG                TTTCATAGAAATCCA  56 60
HR116_RS07055 1551209 .. 1551227 + -11.7   -3.6682   CTCTAAGATATCGGC             CGCCCCT CACGC AGGGGCG             TTTCAGTACCTCGAG  75 84
HR116_RS07060 1551989 .. 1552006 + -14.1   -4.7254   GGCCTGGACGAAAAA             GCCCGCC ATTC GGCGGGC              TTTTTCATGGGCGCT 100 45
HR116_RS07085 1557303 .. 1557318 + -11.8  -3.62096   GCTGGTATAGCGAAA              GGCGCC TGTG GGCGCC               TTTCGCGTCATGCGC  75 95
HR116_RS07090 1557926 .. 1557951 + -16.1  -2.75561   CCCTGGGTTGATCTC         CCGCGGGACGC GTTC GCGTCCCGCCG          CTTCCTTTCCTGTCT  81 30
HR116_RS07095 NONE
HR116_RS07100 1559862 .. 1559881 + -13.6  -4.72986   GCGCCGGCAAGCAGA            TCCCACCC CTCG GGGTGGGA             TTTTTCATGGCCGTG 100 72
HR116_RS07105 1561214 .. 1561227 +  -9.5  -3.31144   TCTTGTCGCCCGGCG               CGGCG AGCA CGCCG                TTGTGCCCATGGCGG  61 274
HR116_RS07140 1571410 .. 1571441 +  -2.8  -4.07568   GAGGCACTGTGATCC      CGAT-GCCGGGCGCG AAG TGTGCCCGGCCGACC      TTTTCCCGGGGCGAC  58 29
        trxB 1572526 .. 1572543 +  -8.3  -5.01553   CTGCGTGCAAGGAAG             GCCGCGC TTCG GCGGGGC              TTTTCTTTGTCCGTT  93 61
HR116_RS07150 1573302 .. 1573318 +  -9.3  -3.38272   CCAGCGCCGCCACCC              CGGCGCC CTC GGCGACG              TTGTGGGTGCTGGTG  63 164
HR116_RS07180 NONE
HR116_RS07185 1580050 .. 1580066 + -13.7  -4.42238   GTTGTCGTTTCCATG              GCGCCAG CGG CTGGCGC              TTTTCGTTCCGGTCC 100 120
HR116_RS07190 NONE
HR116_RS07195 NONE
HR116_RS07200 1583485 .. 1583506 + -11.5  -4.97666   TGCAACAGATGTGAG           GCGCCAGGC TGTC GCCTGGCGG            TTTTTCTCGTATATT 100 27
HR116_RS07205 NONE
HR116_RS07210 1587541 .. 1587557 +  -5.7  -3.53811   CTCGCCCAGCAGCAG              CGCGGCG ATG CCCTGCG              TTTCCAGCGCCTGGC  54 475
        hppD 1590576 .. 1590601 + -18.3  -4.42238   GATCTGATCCCGCTG         CCGCCAGCCTC TTCC GGGGCTGGCGG          TTTTCCTTGCGCTCC 100 34
HR116_RS07235 1592401 .. 1592411 +  -6.8  -5.37345   GCCGAATTCCTACAG                 TGGC AGC GCCA                 TTTTTTCTCGTTAGA  91 143
HR116_RS07240 1592849 .. 1592872 + -14.6   -4.7329   CTTAGCCGAAATGAA          GGAACCCGGC CGCG GCCGGGTTTC           TTTTTGCCTGCTTTT 100 55
        arfB 1593595 .. 1593620 +  -9.7  -3.16881   GCATCACCAGGCAGT         GACCTGCTTCG TTGG TGAAGCCGGTC          TTGGTCAACTGGATG  59 266
HR116_RS07270 1599059 .. 1599094 +   -14  -2.71731   CCGAGTACACAATGA    TCGCGCCG-GATGGGCG AGC TGCCCCTCGTGGCGCGA    TCCTTCGGAGGTCGA  72 173
HR116_RS07285 1603083 .. 1603113 + -17.6  -2.57132   TTGTCGGGAGTCGTA       GGGCGGATAACCGC CTG GCGGTTGTCCGCCG       ATTCTCCGGAGCCCC  83 85
HR116_RS07295 NONE
HR116_RS07300 NONE
HR116_RS07305 NONE
HR116_RS07310 NONE
HR116_RS07315 NONE
HR116_RS07320 NONE
HR116_RS07325 1611192 .. 1611225 + -17.4  -3.28924   TCCAACCGTCCCGAT     TGACCCGTCCGGCC CCGCCC GGCCGGGCGGGGCA      TTGTGGAGAACGCTG  91 23
HR116_RS07330 NONE
HR116_RS07335 1613188 .. 1613224 +  -5.5  -3.36327   CGGGGCGCGGGACGC    GCTCCGCCGCCCGGCGC AAG GCTACGATCGGCGCGGC    TTATAGCTACGATCG  52 52
         acs 1615319 .. 1615348 + -22.9  -4.05788   CGCCTGATCCGAAAC       GACCCCGCGCGGT GCGA GCCGCGCGGGGTC        TTTCATTTGGCGCGG 100 45
HR116_RS07345 1616635 .. 1616675 + -15.6   -5.4833   CGCTATCCGTCAGAG GTGGCACAAACGTCCGCGA CGCC TCGCGC-TGTTTGTGCCAC  TTTTTTATTGAGTGG 100 41
HR116_RS07350 NONE
HR116_RS07355 NONE
HR116_RS07360 1619249 .. 1619265 +  -3.6  -2.70932   AACCGATCCGTCAGG              GACGCT TGCTC AGCGAC              TGATTAGCCGAGAAC  40 6
HR116_RS07365 NONE
HR116_RS07370 1621083 .. 1621103 +  -8.1  -3.53012   GGCTGATCGCCAACG            GCGCGGCGG TTT CAGCCGGGC            TTTGCGACGCCCCGG  63 35
HR116_RS07380 1622877 .. 1622907 +  -4.5  -3.09635   CCCGCGCCGGAGCCG       GGAACCGTGCCGC CGTGC GTGGCGCGGGATC       TTCCCTGCTGGACGT  45 98
        aruF NONE
        astA NONE
        astD NONE
        astB NONE
HR116_RS07405 NONE
        astE 1629251 .. 1629270 +   -15  -3.75153   CCCTCTCGATCATGA            CGGAGCGC TTCG GCGCTCCG             TTTCCGTTGCGGCCG  88 55
        ltaE 1630429 .. 1630448 +  -8.6  -3.54459   TACAACCTTGCCCAA            GGGCCG-AT ATA ATGCGGCCC            TTTGCCGGCGATTCG  65 84
        alaS 1633147 .. 1633168 +  -7.9  -3.14132   GCGCCAGAGCGATGC           GGGGC-CGGG CGG CCAGCGCCCC           TTGATGCCCGGCCGG  56 56
HR116_RS07425 1634510 .. 1634544 + -14.3  -4.64657   GTGAGTGACGCTGAC     AGGCGAAAGGCGCGG CAACC CCGCGCCTTTTGTCG     TTTTTGACCGTTTGG 100 33
        csrA NONE
HR116_RS07435 1635064 .. 1635082 +  -4.6  -3.90291   GCGGCGAAAGCCATC             TTGGTAAC TAA GTTACTGA             TTTGATTGAAAAAAT  60 65
HR116_RS07440 1635265 .. 1635277 +  -3.3  -3.57144   GGCGAGCGAAGGATC                GACAG TTG CGGTC                TTTCACGGTAAAACA  51 72
HR116_RS07445 1635415 .. 1635436 + -15.9  -5.27335   TGCGCCATACCGAAA           GGGCCTGCA GCAA TGCAGGCCC            TTTTTCTTTGCCCGG 100 34
HR116_RS07455 1637040 .. 1637060 + -15.4  -3.84451   GCTTCGGCCGTTCCG            GGCCCGCC TTTTC GGCGGGCC            TTTGCATTTCCGGGA  91 147
HR116_RS07460 NONE
HR116_RS07465 1637701 .. 1637717 + -11.5  -2.52464   GGCGCGCGGCAACCT              GGCGCGG GTC CTGCGCC              TGCATTGAACGAACG  62 1
HR116_RS07470 NONE
HR116_RS07475 1639032 .. 1639052 +   -14  -2.71364   CCGGCTTGCCCAGCG            CCCGCTCC ACATC GGAGCGGG            TCATTCCCGCCATGA  69 232
        mgtE 1641181 .. 1641196 + -11.8  -5.14965   AGCGCCATGCAAGAA              GCCGCC CACG GGCGGC               TTTTTTCATGGCGGT 100 45
HR116_RS07505 1645600 .. 1645642 + -23.7  -3.86194   AGATCTGATCCGCTC CGCTGCAAAAAAGCGCGCCC GATT GGGCGCGTTTTTTTGC-GCG TTTCTCAGCGCCGTT 100 33
HR116_RS07525 1651364 .. 1651391 + -19.2  -4.18058   GTCGGAATGCAAAAA        GCCCCGGCGCTA TCGC TAGTGCCGGGGC         TTTTCGAATGTGGTT 100 495
        dinB 1652973 .. 1653002 +  -7.2  -3.05384   TCCGCTGCGAGCAGG      TCCTGTCCCAGCGA GTAG TCGC-GGGGC-GGA       TTGCGTACGCCCAGC  51 324
HR116_RS07570 NONE
HR116_RS07575 1661673 .. 1661684 +  -3.6  -3.85165   CCTTCTGCCTAGCGA                GGCG CAGG TGCC                 TTTACATTTGGCCTA  56 29
HR116_RS07580 1664187 .. 1664223 + -13.7  -4.66537   CCTGTCGGACCTTTC    TTTGGCGTTGGTCAGGC ATC GGCTGTCCAACGCCAGG    TTTTCTCTTCGGACG 100 79
        cysM NONE
        rlmD NONE
        relA 1668987 .. 1669017 + -16.9  -4.54727   GGCGAGGCGGAAACA      GGCCACGGGC-GCT CGCA GGCTGCCCGTGGCC       TTTTCGTTTCCGGAA 100 41
        mazG 1670234 .. 1670247 +  -5.9  -3.01745   GCAGAAGAGAATCAC               CCGGG TCTG CTCGG                TCTCGTTCTTCACCC  49 353
HR116_RS07610 1671774 .. 1671785 +    -3  -2.80994   CGATAGCATAATGCC                TTTC CTCA GAAA                 TATCCTACGGTTGCC  40 140
HR116_RS07615 1673185 .. 1673211 + -16.6  -2.71263   ACCTGAGATCAAAGG         TGCGCCCCCG AAGTACG CGGGGGCGCA         TGGTTCAGGCCGATT  81 35
HR116_RS07640 1675026 .. 1675043 +  -8.3  -4.25104   CGCGGGCAATAAAAA             ACCGGGC AATG GCCCGGC              TTTTCGTGGGAGGGG  79 43
HR116_RS07660 1678916 .. 1678926 +  -2.4  -4.21936   CAGCCTTTACGGTGA                 CTCC TGC GGCG                 TTTTCGGATTGTCCG  59 190
         hda 1679816 .. 1679827 +  -5.8  -2.53876   GCGGTCGGCAGGGCA                GGAG GGGG CTCC                 TGCCTTACCATCAGC  45 184
HR116_RS07685 1682629 .. 1682643 +  -4.2  -3.03338   GAGGAACCCCAGCAA               GCGC AGGGAAA GCGC               TGTTGGCACGCTTCT  45 89
HR116_RS07690 1683369 .. 1683395 +  -8.7  -3.11192   TCTCCCCAAGTCGAT        CCTGCCG-ATGC CTGG GCATACGGCCGG         TTGAGTCGTCGTGTC  58 485
HR116_RS07700 NONE
HR116_RS07705 1684491 .. 1684529 +  -4.4   -3.9461   CAGTTCGGGGTCGTT   GCGCGTGAGCTCGATCAG GCT CTGTTCCAGTTCGCTGGC   TTCTTCTTCCAGGCC  61 129
HR116_RS07720 1687625 .. 1687639 + -12.8  -5.28481   GCCAAGAAGAAAAAA               CCCGGC GAT GCCGGG               TTTTTTCGTTGCCTG 100 51
HR116_RS07730 NONE
HR116_RS07735 1690351 .. 1690380 + -15.1  -4.57073   CCATTATTGAATGCA       CAAAAAACCCGCC GTTC GGCGGGTTTTCTG        TTTTTCGCGGCGGTC 100 31
        aspS NONE
HR116_RS07755 1694746 .. 1694790 + -14.9   -4.3467   GAGCGATAACGCGAA GTCGGAAGTGGGGTACGCTTG ATG CGTTCGAACCCCGCTTCCGGC TTTTAGTATCCAGCT 100 49
        ruvC NONE
        ruvA 1695932 .. 1695945 +  -3.7  -2.64616   AGAAATGATCCGCCA               GGCCC TGAA GGGCA                TGGTCTAGGTGGCGC  41 4
        ruvB NONE
        ybgC NONE
        tolQ NONE
        tolR NONE
        tolA NONE
        tolB NONE
         pal NONE
        ybgF 1702436 .. 1702452 + -10.8  -5.27477   TTCCCGATGAACAAA              CCCGCG CCTGT CGCGGG              TTTTTTCGTTAGAAT 100 46
        queE NONE
        queC 1704021 .. 1704037 +  -2.1  -3.08133   GAAATCAGTATTATA              CGCCTCG CGT TGGGTCG              TTAGCTCAGTCGGTA  41 74
HR116_RS07820 1704221 .. 1704240 + -11.4  -4.84918   TGTCAATATGGAATA            GCCCGCCT ATTT AGGTGGGC             TTTTCTGTTTCTAAG 100 139
HR116_RS07855 1711255 .. 1711273 +  -5.9  -4.58395   GTCATTTAGTAAAAG             AGAGGGC TGCGC GCCCTCC             TTTTTACACGCTACG  76 41
HR116_RS07885 1718423 .. 1718436 +  -3.7  -2.54504   CCGTCTTAATCAACC               GGTCC ACCA GGTCC                ATGTCTTTCGCACAT  40 186
HR116_RS07950 1728215 .. 1728226 +  -7.2  -3.04792   GGATGGATATATTCG                CCGC CTGA GCGG                 TGTTGACGCTGATAC  51 433
HR116_RS08245 1782665 .. 1782696 +  -2.3  -3.05463   CGCATGACTAGACTC     CTTGCCGG-CTCCCG CCGG CGAGAGATCGG-AAG      TTCAATGAAGGGGCT  41 418
HR116_RS08295 1789453 .. 1789472 + -11.4  -4.84918   TATCAATATGGAAAA            GCCCGCCT ATCT AGGTGGGC             TTTTCTGTTTCTGGA 100 139
HR116_RS08300 1790189 .. 1790218 + -12.1  -4.02022   TGCTCCGTGGCGCTC       CGGAGGAGGGCGG CAAG CCGCCTTCCTTCA        TTTCTACTCGTTGCC  83 113
HR116_RS08315 1792954 .. 1792974 +    -4  -3.95036   TTTTCTATATAAGAG           GCGCTATCG AAGC TGAT-GCGC            TTCTTTCGGATCGTT  58 211
HR116_RS08320 1793840 .. 1793859 + -12.2  -3.06796   GTTCTGCTACGTGGG            CGGGGTAT GTAT ATACCCCG             TTCCATGAGGTGCGA  68 41
HR116_RS08325 1794618 .. 1794634 +    -8   -3.1875   AAGAGCAGAGTAGAA              GAGCAG AAGAA CTGCTC              TTAACTTCCCCTATG  56 48
HR116_RS08330 1797331 .. 1797341 +  -4.6  -3.53012   CAACAGGTCTGGTGT                 CCTG CCT CGGG                 TTTCCAAACGCAGCA  52 141
HR116_RS08340 NONE
HR116_RS08345 NONE
HR116_RS08350 1801801 .. 1801821 +    -4  -3.01924   AATTGGGCGAGGTGC           TGGTG-TGC TGAG GCATCGCCA            TGTTGAACCACGGTG  45 15
HR116_RS08355 NONE
HR116_RS08360 NONE
HR116_RS08365 NONE
HR116_RS08370 1806058 .. 1806070 + -10.5  -3.56092   GCCTTCGGGCCTGAG                CGGCG CTG CGCCG                TTTCGACGATGCTCG  67 27
        nadA 1809098 .. 1809108 +  -8.2  -3.72324   CACGGGCCTGGTGCA                 CGCC GAT GGCG                 TTGTTGGTCAGGCTG  65 310
HR116_RS08390 1810754 .. 1810775 +  -4.3  -3.60971   CGTCTATCGATACTG           GCTGCGCAA GCGT TAGCGGAGC            TTTCGCCGTTCCGAT  53 10
HR116_RS08395 1811902 .. 1811917 + -11.8  -5.75342   ATGAAAAATGCAAAA              GGCCGC GGAT GCGGCC               TTTTTTTTCGGGGCG 100 51
HR116_RS08410 1814016 .. 1814032 +  -5.8  -3.20723   CGCTGCGTCAGGCCA              TGCGCC AGACC GGCGTA              TTGGCTTGATCAAGG  51 0
        bamC NONE
HR116_RS08420 NONE
        purC 1816713 .. 1816747 +  -4.2   -3.1505   CGCAACCATCTGAAA     GAACGCGAAAAAATCT TCA AGAAAGCTTCGCGTTC     TTCGTACAAGCTGGT  47 53
HR116_RS08430 1816877 .. 1816918 + -23.3  -4.37092   TCCGCCATTAGATAT GAGCAAAGCCCCTGGAATGC CTG GCGTTCCAGGGGCTTTG-TC TTTTCTGGCGAGCGT 100 34
HR116_RS08435 1818534 .. 1818562 +  -4.4  -3.21099   CTCGGCGGATTTTCC       CAGCGCACGCGGG TCAG TCGGCG-GCGCAG        TTCGTCCTCCGGCAG  47 348
HR116_RS08445 NONE
HR116_RS08450 1820783 .. 1820812 + -14.9  -2.64099   GCGCTGCCGTGGCGG       CGTCCCGCGGGCG CGCT CGCCCGCGAGAAG        GTTGTCGTGCCGGCC  74 65
HR116_RS08460 NONE
HR116_RS08465 NONE
HR116_RS08470 NONE
HR116_RS08475 NONE
HR116_RS08480 NONE
HR116_RS08485 NONE
HR116_RS08490 NONE
HR116_RS08495 1830802 .. 1830838 + -11.6  -2.89564   TCTGATCCGCTCCGC   CACGGCGGTCGCGGC AGGGAGTG GTCGCGG-CGCCGTG    TCTATCCACTGACGA  67 36
HR116_RS08500 1832159 .. 1832175 +  -5.1  -3.10597   TTCCGCGCCATTGAC              CCTGTAG TGG CTACAGC              CTTTTCACTGGAAGC  47 64
HR116_RS08505 1832898 .. 1832935 +  -6.9  -4.21194   TCTCATGGGCGGTCT   GCGCGGCGCGGAC GGCGACTTCCAG GTCCGCGGCGAGC    TTTTCCGTGATCAGG  72 429
HR116_RS08515 NONE
HR116_RS08520 NONE
HR116_RS08525 NONE
HR116_RS08530 1837499 .. 1837533 + -10.1  -4.93696   ATGGAAAGCAGCTTG     TCAAGGGTTGAGAGC GTTAG GCTCTAAACGCTTGA     TTTTTCATGTTTGAA 100 210
        rmuC 1839569 .. 1839593 +   -15  -2.52464   GGCTGTTCAGAGCCA          CGGCGCGGAG GAAAG TTCCGCGCCG          TCCGTTCAGCGAGCG  74 150
HR116_RS08560 1844743 .. 1844764 +  -9.3  -3.38316   AGGGGTTGGAGGAAC           GCGTCGGCC AGGG GGCAGGCGC            TTGCTTCAGTGGTCG  63 118
HR116_RS08585 1847558 .. 1847577 + -12.1  -4.45945   CGGCGCGGAGCAGAA            CGGGGGC GTCGAA GCCCCCG             TTTTCGTTCATGGCT 100 47
HR116_RS08590 NONE
HR116_RS08595 NONE
        dinG NONE
HR116_RS08610 NONE
HR116_RS08615 1855286 .. 1855314 +  -3.7   -4.0098   GCGATGTGACCGGCG        GTTGAGCCGAATG TTC CATCGGGCTCGCC        TTCTTTCACTTCCAA  61 174
HR116_RS08620 1856240 .. 1856252 + -10.5  -2.57931   GCCGAACCGGGGCAG                GGCGC TTG GCGCC                ATTGTCCCGGATCAA  59 41
        pdxH NONE
HR116_RS08630 1858071 .. 1858102 +  -2.2  -2.56095   TGGGGCTGCAATTGC      TCGTTCCGCGCCG CGGGTAA CGG-GCGGATCAA      TCGATTCACTGTGCA  38 6
HR116_RS08635 1859584 .. 1859603 +  -3.4  -2.90075   TATGCTCGCGGTATG            GCTGCTCA GCCT TGTGCTGC             TCTGATTGAAGCGGG  42 1
HR116_RS08640 1860798 .. 1860842 +  -7.7  -2.50994   GCGGGAAGGGTAGTC G-GCGGCGGCGCGCTCCAGCC AGGCC GGCAGGT-CGCGCCGCTTCAC CTTGCTGGCCTTGGC  50 28
HR116_RS08650 1861688 .. 1861708 + -15.4  -4.48987   TCCCACGTTATCCCG            CGGCCGGC ATTTC GCCGGCCG            TTTTCGTTGTAGCGC 100 45
HR116_RS08655 NONE
HR116_RS08660 NONE
HR116_RS08665 NONE
HR116_RS08670 NONE
HR116_RS08675 NONE
HR116_RS08680 1867817 .. 1867863 +  -5.7  -3.05384   CCGGCTGCCTATACT GGGAGTC-CTTTTTCCGGCGCC GCGC GGCGCCCGTGGTGGAGATTCCC TTGACTCGGACGCGC  49 91
HR116_RS08685 NONE
HR116_RS08690 NONE
HR116_RS08695 NONE
HR116_RS08700 1870657 .. 1870686 + -10.6  -3.17392   CGGACTGCTCTTGTA       GGGAAGGGCCGC CGCTGC GCGGCCCCTCGC        TTCACTTGCCCAGTG  64 25
HR116_RS08710 1872266 .. 1872299 +  -3.6  -4.36914   CCGAAGTGCACCTTG     CCGACCGCGGCGAC CAGCGC GTCGAAGCGACCGG      TTTTCTCGAACAGGG  68 445
HR116_RS08720 1873484 .. 1873496 + -10.5  -3.08813   AGGGTTGAACATTTC                GCCGC GAC GCGGC                TCTATTGCACTCCGG  62 33
HR116_RS08725 NONE
HR116_RS08730 1877840 .. 1877855 + -11.8    -5.626   TCTCGGCATAAAAAA              CGGCCC GCGA GGGCCG               TTTTTTTATGCGCTG 100 49
HR116_RS08760 1883523 .. 1883541 +    -3  -4.90778   GCGGAAAAAGCGACG             TTGCACTG ATC CAGGGCGG             TTTTCTTTCGCTCGA  75 17
HR116_RS08765 1883993 .. 1884017 + -18.7  -5.37593   CGGAAGCATGGGAAA          GGCCCGATATC GAC GATATCGGGCC          TTTTTTCGTTTGCCG 100 58
        flgB NONE
        flgC NONE
        flgD 1885780 .. 1885799 +  -2.7  -3.53012   GTCCAAAGTACAGAT            CATCGGC CAGTAA GCCGGCG             TTTCCGGCAAGGAGC  47 13
        flgE 1887286 .. 1887308 +  -8.5  -5.26316   CCAGGGGTTGCCCCC          GAA-GCCTCC GAAA GGAGGCTTTC           TTTTTTGTAAAATCC 100 103
        flgF NONE
        flgG 1889024 .. 1889043 +  -3.4  -2.58714   GGGCCCTGACCGGGC            CCTGGCTG TACG CCGCGAGG             TAGCTTGATATGAAC  39 42
        flgH NONE
HR116_RS08805 NONE
        flgJ NONE
        flgK 1894134 .. 1894145 +  -2.2  -3.26449   GTTCGATACCCTGAT                TGGA GCGT TCCG                 TTGAGTTCTCTCGAC  45 10
        flgL 1895509 .. 1895531 + -17.8   -4.4078   CCCTCTGTGAAACAG           GGCCCATGAC TCC GTCATGGGCC           TTTTCGTTCGCAGGG 100 45
HR116_RS08825 NONE
HR116_RS08830 NONE
HR116_RS08835 NONE
HR116_RS08840 NONE
HR116_RS08845 NONE
HR116_RS08850 NONE
HR116_RS08855 1901536 .. 1901560 +  -2.8  -2.74782   GTGCCTACTTCCTAT         CTTG-GAGGGG TGTT CCGCTCACAGG          TGGTTGCCGGTTTGT  40 130
HR116_RS08860 NONE
HR116_RS08865 NONE
HR116_RS08870 1907659 .. 1907688 + -21.5  -3.00298   GTCAAGGTGAAGTCA       CGAGGGGGAGCGC TGGC GCGCTTCCCCTCG        TATCTCATTGAGAGG 100 52
HR116_RS08875 NONE
        fliD NONE
        fliS NONE
        fliS NONE
HR116_RS08895 1910837 .. 1910873 +  -5.2  -5.49234   ACATATCCCCCAAAA   CCCCTGCCAGTACTGCTT TCC ATGCGGT-CTG-TAGGGG   TTTTTTATTGCCTCT 100 94
HR116_RS08900 1912504 .. 1912529 + -11.9  -3.54935   GAGCCGGCGCGACGA         CGACCTGTCGG ATGA TTGACAGGTCG          TTTCGCAACGCTTTG  75 7
HR116_RS08905 NONE
        fleR 1915289 .. 1915307 + -13.1  -4.18018   TCGCCATGTTCCCCA             GGCCCGC CTCGT GCGGGCC             TTTTGCGTCCGCCGC  89 45
        fliE NONE
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ 1921495 .. 1921514 +  -9.2  -2.74488   CCCCGCCGCTGAGGC            TCGCCGGG TTGT CCAGGCGA             TGGTTGCCGTACTTC  55 224
HR116_RS08960 1925795 .. 1925838 +   -21  -2.50016   AGGCCGTGGCGCAGG C-GCTCGAGGCCGCCGGCGGC CAG GTCGCCGGCGACCTCGACCAG GTATTCCTGCTCCAG 100 268
HR116_RS08970 1927095 .. 1927107 +  -3.3  -3.41073   GGGAAGGAGAGAACG                CATGC CGG GCCTG                TCTTTGAATGCCATC  49 117
HR116_RS08975 1928703 .. 1928742 +  -2.8  -4.73613   ATGGACTCGCGGGTT TCGAC-CGC-GGGAGCCG GCTTGG CGGCTTTCGGCGCGACGG  TTTTCTTCATGATGG  75 484
HR116_RS08990 1931490 .. 1931521 +    -3  -3.54459   GATGACGGTGCGCTC      CCGAGG-GGCG TCCGCGCGTTC CGCTTCCTCGG      TTTCGGGGCGGTTGG  49 515
HR116_RS09005 1934931 .. 1934981 +  -7.5  -3.79113   CGGACGTCGCGCAGG CGCTTGCCGGGGTCCGCGCTCAGCT CCA GGCTGAGGGTCGGCC--GGCGGGCG TTCTTGTCGCGCAGT  66 96
HR116_RS09035 1939305 .. 1939361 +  -5.8  -5.13521   ATTGCGCCTGCGGCT C-CGCTCCGGCCTGGTTCAGCTCCGCG ATGGGG TGCCGAGCGGCGCC--GCCGGAGCGTG TTTTTTCGCTCGTTT  87 44
         dgt 1941640 .. 1941652 +  -4.7  -2.79302   GCTGTAAGCGGAGGA                GCGAG ATG CGCGC                TGTCGTCGAACTGCT  44 34
HR116_RS09050 1942830 .. 1942842 +  -5.5   -2.8474   CTCCATCTGCGGTTG                CTGGG CCT TCCAG                TGCTTGTACATCCAG  46 458
HR116_RS09065 NONE
        fosA 1945873 .. 1945889 +  -9.3  -3.04144   CGCGCTGAGGCTGAG              ACCGCCG AGG CGGCGGG              TCTTGCGCGTGCCGA  57 334
HR116_RS09085 1949044 .. 1949055 +  -3.6  -3.85698   CGCTCCAGCAACGCC                GGGT CGAC GCCC                 TTTATCCGCCGGGCG  57 273
HR116_RS09105 1951794 .. 1951844 +  -5.4  -3.99592   CGGCCGGACAGTGCC GGCGCGCACGTGCGGCCAGACCTGG CGCT CCAGTTC-GGC-G-ATGATCGCGCC TTTCTCGTCGTGGCT  63 149
HR116_RS09115 NONE
HR116_RS09120 1954678 .. 1954697 + -16.4  -3.28001   TCCGCAAACGAAAAA            CCCGGCGC CATG GCGCCGGG             TTCCCTTTCAGCCTG  88 80
HR116_RS09150 1961465 .. 1961478 +  -5.9  -4.12188   CGGCGAGGTCGTTGC               CGTCG CGCA CGGCG                TTTTCCAGGTGCTGC  66 479
HR116_RS09180 NONE
HR116_RS09185 1970385 .. 1970412 +    -2  -5.06414   GGGGGATCTGTAGTG        GTCAACCCAT CCCGGACA GTGGGTTGAG         TTTTTCTTCGGCCAC  77 422
HR116_RS09210 1980874 .. 1980886 +  -3.4   -3.1637   GGCCGGGGGCTCGCC                GATG AAATC CATC                TTCCTGCGCATCTAT  44 108
HR116_RS09215 1982609 .. 1982623 +  -3.5   -4.2803   CGAGTATTCCGCCAG               GGGCT AAAAA AGTCC               TTTTCAGTTGGACTC  64 143
HR116_RS09220 1983036 .. 1983053 + -12.7  -4.46212   TTCCCGCAAGCAAAA             GCCCGTC GCGA GACGGGC              TTTTGTCATCCAGCG 100 41
        tcdA 1989420 .. 1989432 +  -4.8  -3.90112   ACCAGCGGATAGAGC                GCCT TGAAC AGGC                TTTCCTTCAGCGAGA  61 216
HR116_RS09260 1991841 .. 1991853 +  -6.9  -3.41527   TCGAGGCGTCTGCGC                CGCGG ACT TCGCG                TTGTCGTGGCGCTTC  57 45
HR116_RS09265 1992661 .. 1992686 + -14.1  -3.29096   AACCTGTTGAAAGAG         CGATTCGATGC TCAG GCATCGAGTCG          TTCCTGGTTAATGCA  77 45
HR116_RS09270 1994792 .. 1994813 + -18.7  -3.36273   GCCGGAGAAAGAGGA           CGGGGCGCC CCTG GGCGCCCCG            TTGCTCTTAGCGGCC  93 41
HR116_RS09280 1997691 .. 1997705 +  -5.6  -3.01712   AGGTCTCGGTGTTGG               TCGCCT CCA GGGCGG               TGTTGAAGCCGCCCC  47 509
HR116_RS09315 2002679 .. 2002706 +  -6.8  -2.78384   GCGAGGGCATGCTTC        GATGGCCGGGCC GGAA GGTCCGGCCGCA         TCTCATCCGGAGGAA  49 58
HR116_RS09320 2003384 .. 2003403 +  -8.6  -2.54896   GCCAGGGCTACCTGT            TCACCGAGC GCT GC-CGGTGA            TCCGTTCCCTGCGCA  53 6
HR116_RS09325 2004781 .. 2004814 +    -6  -3.51232   ACGTCTGAGGTGTTT     CCGCGCTACGCTGAA GTCTG TTCGGC-TGGCGCAG     TTCCTTTGACGCAGG  55 60
HR116_RS09330 2008282 .. 2008317 +  -7.5  -2.80816   TGAACGCGCGATGGA    AGGCCGAG-GGCTCGG AAAAG CCGAGCTGCTCGGCGA    TGTCCTGGATCGACA  52 97
HR116_RS09340 2010914 .. 2010930 + -10.8  -5.64274   CTGCCGCCCTTCGAA              CCCGCC CTCGT GGCGGG              TTTTTTTATGCCTCG 100 78
HR116_RS09350 2012645 .. 2012689 +    -2  -3.14211   CCTGCCGGAACCGGC GGTGGGTCCATGAG-CGCCCTG CTG CAAGGCGCCTCG-GCGCCGGCC TTCGTCGGGCACCCT  43 13
HR116_RS09355 2013691 .. 2013709 +  -2.4  -2.70932   GACCGATTCGGTCAA            C-CGAGC CTGAGC GCTCGCG             TCATTGAGGGCGCCG  39 43
HR116_RS09360 NONE
HR116_RS09365 2016653 .. 2016672 +   -10  -3.04322   CCTGCCGATAGCAGG            CCTCGACG CGGG CGTTGAGG             TGTTCGGGCATTCGG  60 494
        ttcA 2019126 .. 2019146 + -11.1  -3.88946   TGACGTGATGAACCT            CTGAGCCGC GCC GCGGGTCAG            TTCTTCTCTCCGGTC  79 22
HR116_RS09390 2020254 .. 2020273 +  -5.6  -3.54459   CAGCGTGCTGGTCAG            CCACAGTG CCGG CGCTGGGG             TTTCCACCGCATTGG  54 432
HR116_RS09405 NONE
HR116_RS09410 2024507 .. 2024518 +  -2.2  -2.94924   GACATCATGCCGCAG                GTGG TAAG TCAC                 ATTTATCGATAAAAA  40 2
HR116_RS09415 2025208 .. 2025240 + -10.7  -3.72984   GCCCTGACGAGCAAG      CGCTAAACTTAAAGT TTT ACTTTAAGTATTGCG      TTTAACTCCTTGTCG  76 20
HR116_RS09420 NONE
HR116_RS09425 2026714 .. 2026759 +  -3.9  -3.82084   GAACAGCGGCAGCAT C-GCCAGGCCCAG-GCCACGC ACCGCG GCGTCGCGCATGGTCTGGCCG TTGTTGGTGTTGAAG  57 225
HR116_RS09435 2028375 .. 2028412 + -17.9  -4.18494   CTTCGCCGCTGTCCC   GGACACAAGGCACTCCGA CCA TCGG-GTGCCTTGTGTCG   TTTTCCGTCCAGGTG 100 46
HR116_RS09440 NONE
HR116_RS09445 2029474 .. 2029485 +  -7.2  -3.08464   GCAGCTATGGGTGCG                CCGC CTGC GCGG                 TTGAATGCCTCGTCA  54 10
HR116_RS09450 2030521 .. 2030560 +  -6.2  -3.86346   CTGTCGGCGATCGTT  GTGGACCTGCGGCCTGGCG ATT CGCC-GGCAGCGGGAAAAC  TTTCTGCACCCATCG  62 83
HR116_RS09455 NONE
HR116_RS09460 2032948 .. 2032971 + -18.2  -2.71144   CCTCCTAGCGCCCGA          CCCATGCCGG TACG CCGGCATGGG           TGATTCCCACGCCTG  86 33
HR116_RS09465 2034778 .. 2034800 +  -2.6  -2.70932   AGATGACGATGCTGG           CGTCCCTG AGGTCGC CGGGGAGG           TCCTTCAGCGACACG  38 197
HR116_RS09545 2053106 .. 2053121 +  -5.4  -4.57569   ACCGACCAGCACCAC              GC-GCAG GCG CTGCAGC              TTTTTCCGCAGGTCG  77 288
HR116_RS09555 NONE
HR116_RS09560 2055294 .. 2055308 + -12.8  -3.36878   CTGGCCTCGGCTTTC               GGCCGC GGC GCGGCC               TTGTCGATCACTGGC  73 241
HR116_RS09575 NONE
HR116_RS09580 NONE
HR116_RS09585 NONE
HR116_RS09590 2059973 .. 2060002 + -15.7  -3.09516   CGGCACTGAGAAGCG       GGCGCAG-GCGCTG TCT CAGCGCGCCGCGCC       TTCGATGATCGCCAG  81 32
HR116_RS09600 2061784 .. 2061806 + -14.8  -2.57463   AGCATCGAGATCAGC           GCCGAGGCCG AGC CGGCCTGGGC           CTTGTCCAGGCCCTT  71 344
HR116_RS09620 2068061 .. 2068098 +  -5.3   -3.9009   GTCGACCAGCAGCAC   GTGGGTCGGCCGCAACG CTTC CGGTGCGTCCGGGCAGC    TTTCTGCGGTGGATT  63 396
HR116_RS09635 NONE
HR116_RS09640 NONE
HR116_RS09645 NONE
HR116_RS09650 2077936 .. 2077950 +  -3.6  -5.52384   GTTCGTGCATATGCT               TTAAGT GCA GCTTAA               TTTTTTTCATGAAAC  91 231
        aprA 2079726 .. 2079737 +  -7.2  -3.25079   AGCGAGGATGGCGGG                CGGC GTTC GCCG                 TGTTATCCGATGTTC  56 223
HR116_RS09660 2080237 .. 2080256 +  -9.2  -2.78463   GGCCAGGCGCGACAG            CTCGTGGC TGGC GCCGCGGG             TCTGCTCGGCGCCCT  55 92
HR116_RS09670 2083105 .. 2083115 +  -8.2  -3.30124   GCGTAGGGCGGATAG                 CGCC AAC GGCG                 TTATCCGCCATCCAG  60 89
HR116_RS09725 2095300 .. 2095314 +    -7  -3.14564   GCACATCGAGGGCGG               CGCCGG CGC CAGGCG               TTGCTGCGCGAGTGG  53 196
HR116_RS09740 2097723 .. 2097743 +  -8.9  -3.14132   GGCGGCGTAGTGGTC            GGGCAGGCT GCC GGCCTGCCA            TTCGTCGACGGCGAG  56 454
HR116_RS09770 2104091 .. 2104111 +  -7.6  -3.05384   CCGGCATGGGAAGGC           GCGGCTGGA AGCG TCCAG-CGC            TTCGCTCGCGAGCCC  54 217
        btuB 2106087 .. 2106110 +    -6  -3.59979   TACCTCAGCGTGCGC          TACCAGG-CTC TGT GAGGCCGGGTA          TTTCGAATGAACGAG  57 11
        cobO NONE
HR116_RS09785 NONE
        bluB NONE
HR116_RS09795 NONE
HR116_RS09800 NONE
HR116_RS09805 NONE
        cobU NONE
        cobT NONE
HR116_RS09820 NONE
HR116_RS09825 NONE
HR116_RS09835 2117574 .. 2117594 + -10.4  -3.62046   AGCAGCACCAGGGCG           CG-GCCGCG CATG CGCGGCTCG            TTCTTCAGCAGGTCG  67 404
HR116_RS09845 2119640 .. 2119656 +  -4.3  -3.34895   CTGACAACCGACGAA              GCCTCTC GCC GAGGCGC              TTCGTTCACGATAAA  48 37
HR116_RS09850 NONE
HR116_RS09855 2121642 .. 2121658 + -15.1  -3.81146   GCCAGGCATGAAAAA              GCCGGGC ATT GCCCGGC              TTCTTCGTTGGCGCG  90 47
HR116_RS09875 2125680 .. 2125711 +  -4.9  -2.89683   CGGTGAAGGCGGCGC      ACTGGGCACCGGG AATGTG CCCGGCGACCGGA       TCTATGGGCTCGACT  44 301
         rnd NONE
HR116_RS09895 2129218 .. 2129239 + -17.3  -2.72511   CGAGCCGTACCCCGC           TGGCGCCGG CTTC CCGGCGCCA            CTTTCACGACGTGAA  84 43
HR116_RS09900 2130376 .. 2130393 + -12.7  -3.05384   GAGGTGGACTTCGCT             CGCGGCT ACTG AGCCGCG              TTCCCTCAGGCGGCG  71 14
HR116_RS09910 NONE
HR116_RS09915 2132270 .. 2132297 +  -2.9  -3.34517   CGCACTTCCTTACCT        TGTGAAATGATA TGTAT TATCATT-CGCA        TATTTGCAAGGGACT  46 53
HR116_RS09920 NONE
HR116_RS09925 2133970 .. 2134005 + -13.2  -2.52543   CCTGCTGCGTCTTCT    CTGCTGTCCGTCGCCG CTGC CGGCGACATCCAGCAG     TCACTTGGGGAGAGT  67 97
HR116_RS09930 2136774 .. 2136784 +  -8.2  -3.02144   GCAGGGAGTCCGGCT                 GGCG CAG CGCC                 TGTTGCGCCAGGTAG  55 217
HR116_RS09945 2139881 .. 2139893 +  -6.3  -2.66106   GCCGCGCCTGTAGCC                TTTCG CGA CGAAA                TCCATTCTTGCGCTA  48 28
HR116_RS09950 NONE
HR116_RS09955 NONE
HR116_RS09960 2141909 .. 2141919 +  -8.2  -3.06133   CCGACGCCCAGTTCG                 GCGG CCA CCGC                 TTCGGTCACCGCTTC  55 203
        phnW NONE
HR116_RS09975 2144759 .. 2144792 + -27.5  -4.37092   TGAGCCACGTCTGTG     CCGAGGCCGCCGCGG GCAA TCGCGGCGGCCTCGG      TTTTCTAACCGGCGT 100 38
HR116_RS09985 NONE
HR116_RS09990 2147724 .. 2147756 + -12.5  -3.33492   GCGTTCAGCCGTGGG      TTGCGCAGCGGCCAG GCG CCGGCCGCCGCGCCG      TTCTCCAGTAGCTCC  71 175
HR116_RS10000 2150101 .. 2150111 +  -5.4  -3.64703   AATGAATTGTAATAA                 CTGA CGC TCAG                 TTTCGGTCCAACGAG  55 231
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD NONE
HR116_RS10025 2155390 .. 2155413 + -13.8  -6.02914   CACGCTTTAGGGAAA          GCCCCGCCGG TCGA TTGGCGGGGC           TTTTTTTTGTCTGCG 100 46
HR116_RS10030 2157827 .. 2157851 +   -15  -3.61894   GGCAGGCCACGGAAG          CCGGCGCCCA CTGCC TGGGCGTCGG          TTCTTCCCGGCGATT  85 46
HR116_RS10035 NONE
HR116_RS10040 2158870 .. 2158892 + -16.3  -4.72272   GGCCAAAAACGGCAA           GCCCCTGCC ATCGC GGCAGGGGC           TTTTTCCTGCCGGCG 100 56
HR116_RS10045 NONE
        ilvA 2161078 .. 2161092 +  -3.4  -2.64735   GCGGCGGTGCGCCAG               CGGGAC ATG GCCCTG               TCATGTCCCTCGGCT  39 46
HR116_RS10055 2163495 .. 2163505 +  -6.8  -2.52464   CACCAGCAGGCACGC                 CAGC GGC GCTG                 TCAGTTGCACCCCGA  47 443
HR116_RS10065 NONE
HR116_RS10070 2165315 .. 2165340 + -13.2  -3.05596   GCTGCGCCGGGGAGG         ACGGCGGCCG GATCGG CGGCCGCCGC          TTCGCTCAGCCCCTG  71 50
HR116_RS10080 2168154 .. 2168168 +  -4.9  -3.40403   GAATTGAGTCTAGGT               CCCGC CAGCC GTGGG               TTCTAGTCGACCAAA  53 337
HR116_RS10135 2180151 .. 2180166 +  -3.2  -3.18264   CGTCTGTTCCCCGAG              CCGC GTTCCTGA GCGG               TTCGTCACTCGACAG  44 81
HR116_RS10140 2181046 .. 2181091 +  -3.7  -3.05384   GCGGTGCCCGGCGGC CCTGGCCGGTTGCCGC-GCCGG CGT CTGGCGGCGGCGCCCGTAAAGC TTGCGTAACGAGGCG  45 86
HR116_RS10145 2183155 .. 2183170 +  -5.4  -3.19463   CGAGGGCGGTCAGGT              G-CAGCC GCA GGCTGGC              TTCGTGGATCATCGC  49 422
HR116_RS10160 2185947 .. 2185961 +  -9.2  -5.00616   GAGCGCCGACCGTTC               GTCCGC GCC GCGGGC               TTTTTTCCCCGCCAC 100 107
HR116_RS10165 2186461 .. 2186473 + -10.5  -3.05715   CCCTGTCCCTGCTGT                GCGCC GGC GGCGC                TTCGCTGGCCGGCTT  62 88
HR116_RS10170 NONE
HR116_RS10175 NONE
HR116_RS10195 NONE
HR116_RS10200 2192212 .. 2192240 +  -8.8  -3.10409   GTGCGCTTCGCCTGA       GCGCG-CGGTGCT GGAC AGCCTCGGCGCGC        TTGCATAAGTTCGTG  57 26
HR116_RS10205 2192896 .. 2192910 +  -3.4  -3.26471   AGGGCCTCGGCCAGG               CGCTCG ATC TGCGCG               TTGCTCTCGCAGTCG  46 165
        rhtA 2195185 .. 2195231 +    -9  -3.28712   GCGCCGCGGCCATCC CCACGCCGGCGGCGAAGCGCGC GTC GCGCGGCAGGCCGGCGCCGAGG TTGTGGCCGACCCGC  61 460
HR116_RS10230 2196918 .. 2196938 + -19.7  -3.05384   CCGACGGAGGCGGTG            CCCCCCGGC AAG GCCGGGGGG            TTGAGTAGCGGGGCG  93 41
HR116_RS10235 NONE
HR116_RS10240 NONE
HR116_RS10245 2201026 .. 2201049 + -13.8  -2.87132   TGAGGGGAGGGCGGA          GCCACCGGGC CTGG GCCCGGTGGG           TGTCTGGGCCGCGGC  74 38
HR116_RS10265 2204148 .. 2204159 +  -3.6  -2.64735   GCTCACACTATTCGA                GCCG CTAA TGGC                 TGGTCTCGCTGAGCT  39 18
        hxsD NONE
        hxsB NONE
        hxsC 2207505 .. 2207546 +  -7.4  -3.60792   GCCAGCGCCGGGCTT CGCCGCGA-ACC-AGGTCGAG GCC CTCGGCGTCGGTGTCG-GGCG TTTCCAGGTTGAGCG  60 463
HR116_RS10290 2209483 .. 2209514 +  -5.2   -2.5294   CCTCGGCCTGCTAGA      GTGTGCAG-CCTC GTTCGCG GAGGTCTGCATGC      GTATTCTCGCCGATG  43 212
        pdxB 2210739 .. 2210754 + -11.8  -5.32944   GGAACTCCCGTAAAA              CCCGCC TTCT GGCGGG               TTTTTTCGTTATGGC 100 111
HR116_RS10300 2212215 .. 2212259 + -25.9  -2.62396   TCTGCTTTCCATACG GATCCATCCAAACAGGGCTGC AAA GCCGCCCTGTTTGGATGGACC TCATCTAAAAAAATC 100 66
HR116_RS10305 NONE
HR116_RS10310 NONE
HR116_RS10315 2216305 .. 2216319 +  -2.2  -3.55857   TTTTTTATAGGTGTA               TTAATT TAA AGTTAA               GTTTTTATGGTAGTT  49 132
HR116_RS10320 2217947 .. 2217990 +  -5.3  -3.74251   TTAACGCACTATCCC ATCTGCCATTATCTGCTGA TGTCAT TCTACAGATACTGGCAGAC TTTGGTAAAAATATG  58 71
HR116_RS10330 2220895 .. 2220905 +  -6.8  -3.48276   GTGACAGTGGACAAG                 CAGC GCG GCTG                 TTATCTGGGAGGCGA  57 136
HR116_RS10335 2221456 .. 2221496 +  -6.8  -4.11692   GCTTCTGCCGCACCA GCC-CCAGTGCATC-GCTGC CCA GCAGCAGGTGCGCCGGCGGG TTTTCCGCGTCGATG  67 192
HR116_RS10345 2223560 .. 2223579 +  -7.2  -3.28712   TCCCGCCCTTGATCC            CCGCGTTTC GCG GAAAC-CGG            TTGTGCAGGACGCAC  58 317
HR116_RS10350 NONE
HR116_RS10355 2224339 .. 2224384 +  -9.5  -3.05384   CTCAGGAAGCGTGGC TGGCG-GCCACCGGGCGCTCGC GCA GGGCGCGCAGGGTGGCGCGCAA TTCCGTGGGGCGCAC  60 66
HR116_RS10365 2226742 .. 2226765 +  -5.3  -3.40403   GGCAGCGATGGGCCC          GGCGCA-GAT CAGAC GTCGTGCGCC          TTGTCCTGCCGCCGG  53 42
HR116_RS10370 NONE
HR116_RS10375 NONE
HR116_RS10380 2230734 .. 2230746 +  -3.3  -2.78596   AACAAGGCGGTGACC                CCATG ACT CTTGG                TCTGATGGAGGAGTG  40 20
HR116_RS10385 2232132 .. 2232144 +  -4.7  -3.92542   GGCCCATCTTCCGCC                CCTGG CGC CCCGG                TTCTTTCCGCCTCGG  60 483
HR116_RS10395 2234677 .. 2234700 + -14.6  -3.21416   CAGCTCCGCCAGTTC          GCCGCGCAGCC AGA GGCTGC-CGGC          TTCGTCGTCGGCCTG  76 74
HR116_RS10405 2239091 .. 2239129 + -13.1  -3.35679   CTGGCGCCTCAGGAC  GACGGCGG-CGCCAC-CTG AAC CTGCGTGGCGACCGCCGCC  TTGTCGATCACCGAC  74 60
HR116_RS10420 2241010 .. 2241022 +  -6.2  -3.18681   CCAGCGGCCCAGGTA                CGCG GCTGG CGCG                TTCGTAGGCTTGGCG  51 76
HR116_RS10430 2243706 .. 2243728 +  -9.9  -3.54424   TCGTTGCAGGCGGCG          GCGC-TCCTC CTCC GAGGACGCGC           TTTCCAGGCGTCGCG  67 288
HR116_RS10450 NONE
HR116_RS10455 2250192 .. 2250210 + -13.8  -2.62371   AATGGCGCTGCCCGA             CGGTCGCC GCT GGCGGCCG             CTTCCTTCCATGCCT  71 177
HR116_RS10460 2251331 .. 2251346 +    -6  -3.08798   CTGCGGCGTATGCGG              CGCCAG TTCG CGGGCG               TATTGCATCACCAGT  51 204
HR116_RS10470 2253378 .. 2253407 + -16.5  -3.99494   CGGTCTACTCTTTCC       TAGGGCGACCTGA CTTG TCAGGTCGCCCGA        TTCTTCTTCCCTTGG 100 121
HR116_RS10510 2263435 .. 2263460 +  -6.7  -3.01924   TGAGCATTTCCTCCA         CCGCGCTCTGG ATGA TCAGCGCGCCG          TGTTCGGCGACGGTG  51 475
HR116_RS10520 2265561 .. 2265582 +  -5.7  -4.19817   CGATGCGCAATTGAT           GCTGCCGTG TCCG CACGGCCGG            TTTTCCGTCCCTGGC  67 438
HR116_RS10530 2267597 .. 2267616 +  -4.2  -3.66018   GCAGCAGGCGATTGC            CCAGCA-GG CAG CCGTGCAGG            TTGTTGAAGTGCTCC  54 368
HR116_RS10540 2269566 .. 2269591 +  -6.1  -3.53811   AAAGTTTTCCCCGGC         CAGATGCTTTC AACT GCAAGCATCCG          TTTGAGACAGGTCAA  57 91
HR116_RS10545 2272539 .. 2272554 +  -6.2  -3.65084   TCAGTTCGCATAAAA              TGTGAT CTAG ATCACA               TTTAAACGTTTGCTT  57 190
HR116_RS10550 2273722 .. 2273742 +  -7.6  -3.66256   GTCGGGCGGTGCGGG            TGGCCTTT GCCCG GAAGGCCA            TGTTTTGGGGCTGTG  62 203
HR116_RS10555 2274530 .. 2274541 +  -7.2  -3.58726   GGGGACCTGTCGGCT                CGCG CCGG CGCG                 TTCTCTGTCGGAGAG  62 42
        mexM NONE
        mexN NONE
HR116_RS10580 NONE
HR116_RS10585 2284380 .. 2284405 +  -2.3  -4.63218   GCGGCGCTCCTTAGT         GCGTGCGCGGC TTGA GCAGGGCGGGC          TTTTCTTCCGGCGCC  68 458
HR116_RS10600 2286459 .. 2286476 + -12.7  -4.85782   TGCATTTCCCCTTTG             GGCCTCC TGCG GGAGGCC              TTTCTTTTTCCGGAG 100 51
        fliL NONE
        fliM NONE
        fliN NONE
        fliO NONE
        fliP NONE
        fliQ NONE
        fliR NONE
        flhB 2292173 .. 2292187 +  -2.8  -3.67976   CCTTGGCCGATACCC               GCTC GGGATGA GAGC               TTTGCCGTTCATGGA  51 73
HR116_RS10645 2293439 .. 2293449 +  -6.8  -2.53641   CAGCGGCGGAGGCGG                 TGCC TCG GGCA                 GTTGGTAATGGGTTC  48 7
HR116_RS10650 NONE
        flhA NONE
        flhF NONE
HR116_RS10665 NONE
HR116_RS10670 2300237 .. 2300256 + -12.8  -2.88999   GCAAAAGAATGTGTG            GCGCGTCC CCTG GGGCGCGC             TCTGGTCTGTACGGA  70 73
HR116_RS10675 2300672 .. 2300688 +  -2.2  -2.78395   AACGGCTGAAGCCGG              CCAAGA GGGTG TCATGG              TGCTTGGTAACGATT  39 32
HR116_RS10680 2301589 .. 2301610 + -11.5  -3.34398   GCGGGCGGGCTGAAG           TCGGTCCGG AAAG CCGGGCCGG            TATTTCCGGCAGGAC  69 141
HR116_RS10685 NONE
HR116_RS10690 NONE
HR116_RS10695 NONE
        motD NONE
HR116_RS10705 NONE
HR116_RS10710 2308703 .. 2308718 +  -7.5  -4.09739   ATTGATAGACAGCTT              CCGCC ACTTGC GGCGG               TTTTCGAGAGGTTAG  70 36
HR116_RS10715 2309210 .. 2309220 +  -5.4  -2.57132   GGTCGGAGCTGGGCA                 GCAT CTG ATGC                 GTTCTACCGACACGA  43 18
HR116_RS10720 2309646 .. 2309685 +  -8.4  -4.07568   CCTGCACGAAGCCAA  GGGCAAGTGACGGTCGCCG GCC CGGCG-CTGGCGCTGGCGC  TTTTCAGGCGAGCAG  73 16
HR116_RS10730 2311485 .. 2311495 +  -4.6  -3.89822   AGTCCTATTAATTGC                 GCGG CTG TCGC                 TTTCTAGAATCGGTC  60 55
HR116_RS10735 NONE
HR116_RS10740 2312837 .. 2312854 + -12.7  -2.71011   ACTTTCCCTGTCGAT             GCGTGGC TGTC GCCACGC              TCATTCCAGGAGAGT  68 120
HR116_RS10745 2313638 .. 2313655 +  -9.8  -4.77036   GCGGGGCACGAAAAA             GCCGGC GCGAAG GCCGGC              TTTTTCGTGGTCGCC 100 50
        ccmA NONE
        ccmB 2318324 .. 2318351 +  -7.6  -3.34398   CCGCCCACGCTTGAC        CCGGGCTGGC AGCGGAAG GTCTGCCCGG         TATTTCCAAAGAGCC  58 89
HR116_RS10780 NONE
        ccmD NONE
        ccmE NONE
HR116_RS10795 2321760 .. 2321774 +  -4.2  -3.01712   CCCTGGGCCTCGCCG               GTCAGG GAG CCTGAG               TCTTGAAACGAGCGA  45 12
HR116_RS10800 NONE
HR116_RS10805 NONE
        ccmI NONE
HR116_RS10815 2324711 .. 2324737 +  -5.8  -3.15861   CATCTCTTCCTGCGG         TGCAGCCGGC AACAGGC GTTGGCTGCG         TTGCTGCCAGTGCTG  49 290
HR116_RS10825 NONE
HR116_RS10830 2328304 .. 2328318 +    -7  -2.52464   TGGCAGAGGTCCTCG               CGGCGG GTG CCGGCG               TCCATTCCCAGCCAC  47 391
        eutH 2334572 .. 2334598 + -14.5  -2.71712   TGAAACATCCCCCGA        CGAGCGCCGCGA GCCA TCGCGGCG-TCG         CTTTCCGCAACGAGG  75 38
HR116_RS10860 2335011 .. 2335034 + -18.2  -4.72272   AAGCCGAATGAAAAA          GCCGGAAGCG CGAG CGCTTCCGGC           TTTTTCGTCAAGCAG 100 61
HR116_RS10915 2348155 .. 2348177 + -10.5  -3.11619   GCCGGTTGAGCTTGC           GGCCCGCTC ACCAG GACCGGGCC           TTCGCTCCCTTCTTC  64 32
        moaA 2350446 .. 2350477 +    -5  -3.14931   TGACGGTATCCTCCT      G-GGACGATGGCACC AAC GGCGCCATCCGCCGC      TTCCTCCCCCATGCC  48 38
HR116_RS10930 2351239 .. 2351274 +  -5.5  -3.07043   TGCCCATGCCGATGC   TTACCG-CCACCAGCAA CTGG TTGC-GGCGGTCGGTGA    TGTTGGCCTCGTGGA  47 317
        uraH 2365190 .. 2365207 +  -9.8  -5.63103   GAGTCCTTTTCCCTG             GCCCGC CATCGA GCGGGC              TTTTTTTCGTTCGCG 100 68
HR116_RS11010 2367901 .. 2367931 + -20.6  -3.53224   GCCTGATCCGAAGCA       TGAAAAAGCCCCGC GAT GCGGGGCTTTTTCG       TTTCCGCCGGGAGTC 100 35
HR116_RS11040 NONE
         smc 2379844 .. 2379856 +  -4.8  -5.59502   GCTCCACGTTTCAAG                GGAC AGGAC GTCC                TTTTTTCATTTTTTA 100 130
        zipA 2380823 .. 2380840 + -11.3  -4.54727   GCGAACTACTCTATA             GAGCAGC CGAG GCTGCTC              TTTTCGTTTCACGGA  95 75
        ligA NONE
HR116_RS11060 NONE
         ffs 2383871 .. 2383901 +  -5.3  -4.07568   GTGCCGGGGTGTGGC       TGGCGGGGCCG CCTCCATTT CAGGCCCGCCA       TTTTCCGCACGCCGC  63 18
        dnaX NONE
HR116_RS11080 2387300 .. 2387310 +  -2.4  -2.76696   TGATCCCGCGTTCGT                 GCCG GGT CCGC                 CTTCTTCGGACGGCG  39 38
        recR 2388006 .. 2388020 +  -5.6  -3.66803   GGCGGCCTATACGCC               CTCGCC GAT GGCCAG               TTTCCCGTATTGAAA  57 69
HR116_RS11090 NONE
HR116_RS11140 2397412 .. 2397444 + -13.4  -2.75844   TAGAAGGGGCGGGGA      TTCACCGCCCTGTC GTGCG GGCAGGGCGGTGCG      CTTTCAGATCACCCG  72 38
HR116_RS11215 2412011 .. 2412044 +  -4.6  -2.63079   CCCCTCATAAGCTGC    GGCGCAACCAC-CCTCG CAT CGAGGCGTGG--GCGAC    TGACTTCTCTGAGGG  43 57
HR116_RS11220 2413231 .. 2413257 + -15.9  -2.62933   CTTCAAGTGACGGCA        GG-CGCGGGGAG CTTC CTCCCCGCGGCC         TGATCTCAGCGGTTG  77 31
        rlmM 2419301 .. 2419327 + -10.1  -2.70932   GTGACCTGCCATCTA         CGCCGCCTC GAACGCTGA GGGGCGGCG         TCATTCCGGCCGGGG  60 8
        tusA 2420123 .. 2420136 +  -3.7  -3.27022   GGCAATCGTAGACCG               CCAGC CCCT GCGGG                TTGATCTCCCGTGCC  47 506
HR116_RS11275 2427385 .. 2427402 +  -6.2  -3.72742   TTCGAAGTCGTGCTG             GCGGGC GCTCAG GCCTGC              TTCTGTTCCTGCTCC  60 86
HR116_RS11285 NONE
HR116_RS11290 2429618 .. 2429632 + -12.8  -4.39166   GCGGGCAAGAAAAAA               CCGGCC TGC GGCCGG               TTTTCCTGTCTGCCC 100 109
HR116_RS11305 2431751 .. 2431761 +  -6.8  -3.01712   TGCGGTTGGCCGGTA                 CCTG CAG CAGG                 TATTCGAACAGCGCG  51 217
HR116_RS11315 2432775 .. 2432811 +  -5.7  -3.54488   GGCGGAAACGCGCCG    CTGATCCGCCGGGCT TGGCGGC GGCCTGGCCGGTCCG    TATTCTTTGCGCCCG  57 22
HR116_RS11320 NONE
HR116_RS11325 2433901 .. 2433915 +  -9.2  -5.71712   TTCCTTGCAAAAAGA               CCGCCT CCG GGGCGG               TTTTTTTGTGTCCGG 100 48
        sdhC NONE
        sdhD NONE
HR116_RS11345 NONE
HR116_RS11350 2438854 .. 2438882 +  -5.3  -3.90761   GTGCGTAATATGCTG       CTGCAGAGCGGA ACCTGA TCCTCTC-GCAG        TTGTTATATGAGTTG  60 8
HR116_RS11355 NONE
        odhB 2443249 .. 2443274 +   -14  -2.72144   TAGCGTTTCTCTTCA         CGG-CGGCCCC CTCGT GGGGCCGTCCG         GTTTCACCCGAATAA  72 43
        lpdA 2444850 .. 2444886 + -20.9  -3.53012   TCTGTAGAATCCACG    GTTTGCCGCCTGCGTCG GGA TGCCGCAGGCGGCAGAC    TTTCAGAAGAACCAC 100 139
        sucC NONE
        sucD 2447142 .. 2447179 + -21.4  -3.50572   GTTTTCTGAGTTCCA   GGACGAAGGCCACCGC CTCACA GCGGTGGCCTTCGTCG    TTCTATCGCATCCGT 100 49
        brnQ 2448765 .. 2448782 + -14.1  -4.72272   GGCGAACCCCAGGAA             GGCCGCC TCCG GGCGGCC              TTTTTCATGAGCCGA 100 48
HR116_RS11385 2449829 .. 2449867 + -13.1  -3.77775   GTAGCCGGAGCGCTC  GGCTG-GGTCTCGGTAGC CGGA GCTGCCGGGGCCGCTGCC   TTGTCTTCCTCTTTC  83 202
HR116_RS11395 NONE
HR116_RS11400 NONE
HR116_RS11405 2452306 .. 2452326 +  -5.4   -5.0538   CTGCTCGAACGCTAG           TCGTCGCAC GATG GTGCG-CGG            TTTTTTCGCATAAGC  83 26
        htpG 2454339 .. 2454366 +   -20  -4.13014   TTAAGCAGTAGCCCC        GACAAAGCCCGC TTCG GCGGGCTTTGTC         TTTTCCAACTCTCGC 100 37
HR116_RS11415 2455189 .. 2455216 +  -9.1  -3.57144   CGTTCGCGCACGTCC        TCGGCGAAGCG CCGGGC CGCCTCGTCGA         TTTCCCGGTCGAGGC  64 94
HR116_RS11425 2457191 .. 2457201 +  -8.2  -3.17794   AGCCCTGCCGGTCGA                 GGCG TTG CGCC                 TGTTGCTGATCGGTT  56 401
HR116_RS11455 NONE
HR116_RS11460 2464401 .. 2464423 +  -5.5  -3.53012   TCCCTTGTCAGTCAG           GCGGTATTC CTGGT GACTGCCGC           TTTCGGCCGGGACCG  54 364
HR116_RS11500 NONE
HR116_RS11505 2474967 .. 2474988 +  -5.1  -3.01712   GGCGCGCGACGAAGA           GCCGAAGTT GTGA AACTCTGGC            TGTTGCGCCACGGCG  47 13
        sixA 2475482 .. 2475498 +  -2.1   -2.8092   CCGAAACATTTCCCG              GCTTGCC TGC GGTTGGC              TGTGATGGAATATTC  39 67
HR116_RS11515 NONE
HR116_RS11520 2477702 .. 2477734 +  -2.5  -4.37886   TGGCGGTGGTGCCAT      TGGCGGGCAGGGC GGGCTGA GCGCGGTCCGCAA      TTTTGTCCAAGATCG  62 6
HR116_RS11525 NONE
HR116_RS11530 NONE
HR116_RS11535 NONE
HR116_RS11540 2481059 .. 2481074 +  -4.6  -3.95817   CTTCGCGCGCTGAAA              CACCGG CTTG CCGTTG               TTTCCTTGACTATTC  60 28
HR116_RS11545 NONE
HR116_RS11550 2482611 .. 2482654 + -12.2  -2.52464   CTCAACTGGCTGCGT TGAACGCGTTCGCCCGGGCC TGCG GGCCCGGGCGATGGCGAAAA TGCCTTCGGCAAGGC  65 23
HR116_RS11555 2483864 .. 2483880 + -15.1  -4.70659   GACGAAGGAGAAAAA              GCCCCGC GAT GCGGGGC              TTTTTGCGTCTGCGG 100 43
HR116_RS11580 2489428 .. 2489439 +  -7.2  -3.05963   GGAATCATGGCAACC                GGCC TAGG GGCC                 TATTGGAGTGAGCAT  54 55
HR116_RS11585 2490629 .. 2490654 + -13.2  -3.25823   TCCTTCGCCTTGTCA         CCGGCCGTGG CGCAGT CCCCGGCCGG          TTGCTCTCCCAGGCG  74 47
HR116_RS11590 NONE
        kdpA 2492572 .. 2492582 +  -3.2  -2.57564   CCGATCGCTGAACAA                 CTGA GCC TCGG                 CTTCTGAAGGAATCG  39 8
        kdpB NONE
        kdpC NONE
HR116_RS11610 2498064 .. 2498077 +  -3.7  -3.16288   GCGCACTTGCCTGGC               GCCCG CGCT CGCGC                TATTCCTGCCGTTTC  47 46
HR116_RS11615 2498818 .. 2498848 +  -7.5  -3.28712   GGCGGGTGTCGGTTA      TCGC-CTGCGCGAC AGCT GACGCGCAGCGCAA       TTCTGCGCGAGGGGC  58 7
        glsB 2499880 .. 2499912 + -12.7  -2.50252   GAAACCGCCGCCCGT     CGTGGCGGCGCTCG AATTCC CG-GCGCCGCTGCG      CTATGTTCTGCGGCT  67 39
HR116_RS11625 2500918 .. 2500955 + -11.1  -2.56271   CGGATTCCGCCGGAA   CCGGATGGAGCAGGGCG TCGG CGCTCAGCTCCGGCGGG    GTATTGTCGTCGCCG  59 361
HR116_RS11635 2502041 .. 2502055 +    -7  -3.74693   GGCGATCGGTCCTCT               GGCGGC GGC GCCGGC               TTTGCTAGAATGGGC  62 50
        selD NONE
        mnmH 2504514 .. 2504535 + -10.1  -2.71731   ATCACCTGGTCGAGG           TCGCCTTCG ACTT CGTAGGCGA            TGGTTCCGCAGTGGC  57 296
HR116_RS11655 2505370 .. 2505390 + -13.9  -3.15544   GCGCCGGCACACCGG            CGCCTGGCC CGC GGCCTGGCG            TTCCTGCCACTGGCG  73 80
HR116_RS11665 2507890 .. 2507908 +  -2.3  -3.48024   CATTTCCGCTTGTAG            C-CGCGGC CTGG GCGGCGAG             TCTTTCCTGCTGGCG  47 26
HR116_RS11680 2511790 .. 2511815 + -11.9  -2.79749   GGCGGCGATACAACC         G-GGATGCCCCG GCG CGGGGCATTCGC         ATTCTGTTACAGGTC  66 44
HR116_RS11685 2513294 .. 2513310 +  -9.3  -2.52623   AGCCGTCGGCGCGCA              GCACGGC GAT GCCGGGC              ATGTTCTGCGAAGCC  54 496
HR116_RS11695 2515051 .. 2515093 +  -6.2  -4.07568   GCCGCCGGCTTCCTC GAAGCAGCGTTG-GAGCAG CCGCGA CTGCTCGCGACGCAGCGCC TTTTCCAACCGCACG  66 184
HR116_RS11705 2516651 .. 2516681 +  -3.8  -2.70932   TCCGCGACGCCCAGG       CCGCCGAAGCGG CCTGAAC CCTCATCGGCGC       TCCTTCCGGGGCGCC  42 9
HR116_RS11710 2517405 .. 2517419 +  -2.7  -4.83593   GCGAAATTTTTACAT               CGGGC TGGAT GCGCG               TTTTTCCTGATTATT  74 105
        tssA 2520052 .. 2520064 +  -6.2  -2.59431   GGTGGTGCTCGAATA                GGGC TTCGC GCCC                TCAATTCTCAAGGAG  46 25
        tssB NONE
        tssC NONE
        tssE 2522606 .. 2522622 + -10.1  -3.38812   CAGCAATCCCATCGT              CGTCGGT TCC GCCGACG              TGTTCTTCGACGGCC  66 113
        tssF NONE
        tssG NONE
        tssH NONE
HR116_RS11755 2529826 .. 2529846 +  -8.1  -3.05816   GCCGGGCGCGCGCCT            GGAGCGCGG CGT CCGCGGCCC            TTCCATGGAGACTCC  57 75
HR116_RS11760 NONE
        tagH NONE
        tssJ NONE
        tssK NONE
HR116_RS11780 NONE
        tssM 2537456 .. 2537466 +  -2.4  -2.78384   GCGCAGCTTCCGCAT                 GCCG GTG CAGC                 TCTGATGCAACGCAC  39 10
HR116_RS11790 NONE
HR116_RS11795 2539403 .. 2539452 + -10.6  -3.14132   GCCCCATGTAGCGTA GGCACGTAGACGTCGCCCTCGGCG AGTG CGCCGCTGGCACCGTC-ACG-GCC TTCCTCGAAGGGGAA  64 243
HR116_RS11805 2540324 .. 2540341 + -14.1  -3.90744   GAAGGAAACGCAAAA             CCGGCCC AGTG GGGCCGG              TTCTTTCGCCAGCGG  86 49
        prmB 2544127 .. 2544142 +  -6.8  -3.05596   GGATGAAATGGTCGC              GGCGCA GGCG TGCGTC               TTCGGTCAGGCCATC  51 376
        aroC NONE
HR116_RS11850 NONE
HR116_RS11855 NONE
HR116_RS11860 2549222 .. 2549244 + -18.4   -2.8372   ATCCGTCACCATCCG           CGCCCCCGGT CCT GCCGGGGGCG           GTTTCATCCGGAGTC  90 56
HR116_RS11870 2550484 .. 2550506 +    -9  -2.88579   CTCTCCCGAGGCGAT           CGCCGCGGCG AAG CGTTGCAGCG           TCTGTACCCGCTTGC  56 329
        speE 2552113 .. 2552126 +  -9.5   -4.7497   ACGCTTCACCAAGAA               GGGCC GCAA GGCCC                TTTTTCATGCGTCGC  93 40
HR116_RS11885 NONE
HR116_RS11890 2555254 .. 2555269 + -11.8  -5.40072   AGCAAGCATGTGAAA              GGGGCC TTCG GGCCCC               TTTTTTTCGGCGCCA 100 46
        popN NONE
        pcr1 NONE
        sycN NONE
        pscX NONE
        pscY NONE
        pcrD 2566378 .. 2566406 +  -3.2   -2.7795   ACATCCAGCCGCTTG       GCAGGATC-GTGTT GTG AGCGCCGATCC-GC       TGATTCCCTGGTTTC  40 9
        pcrR NONE
        pcrG NONE
HR116_RS11975 NONE
        pcrH NONE
        popB NONE
        popD 2570635 .. 2570650 +    -9   -5.4505   GCGCGGGAGGAAAAG              GCCACA GCGA TGTGGC               TTTTTTCTTAAAAGA 100 50
        exsC NONE
        exsE 2571414 .. 2571436 +  -4.8  -2.74523   TGGAGGCGCGCACGG           TCCGGCGC AGGTGAG GTGCTGGA           TGCTGTTGCCGCTGG  44 12
        exsB 2571970 .. 2572024 +  -2.6  -2.98813   CTTCTAAAGAAGGCT GGATTAATTGGCGGAAGCCGGCTCGC TCT GCGAATCAGCGCACGTCGGATAATCC TGATTATTATAAAAT  41 146
        exsA 2573032 .. 2573055 +  -5.2  -2.78384   TAGAATCGGCCCAAA          TTGCAGGCTC TGAC GAGCGCGCAA           TGTAGTGAGGAAGCC  44 74
        exsD NONE
        pscB NONE
        pscC NONE
        pscD NONE
        pscE NONE
        pscF NONE
        pscG NONE
        pscH NONE
        pscI NONE
        pscJ NONE
        pscK NONE
        pscL 2581022 .. 2581036 +    -7  -3.05384   GGGAACCAGGCGCCG               CCCCCG GCC CGGGCG               TTGGCTCCGGGCCGA  51 41
HR116_RS12085 2586324 .. 2586375 +  -8.4  -3.95584   CTTCGCTGCGTCCGT GACGGCGGCGGGA-CCCCGGCCGCG ATC CTGGGCCGGGGCTCCTGCGTCGGGC TTTCCTTCCTCGAAG  71 24
HR116_RS12090 2587198 .. 2587233 +  -8.3  -3.18832   CGAGACGGCTGTCTG    CATGGAAGGGAGG-GG ATAAG CCGTCTCCCTTCCGGG    TCTGTTCTAGACTTA  58 102
HR116_RS12095 NONE
HR116_RS12100 NONE
HR116_RS12105 NONE
HR116_RS12110 2591541 .. 2591557 +  -3.6  -3.05844   GTCGTCGATCACCCG              TTCCGG GAACG CCGGCA              TCTTCGCCTGCGGCC  44 117
HR116_RS12120 2593506 .. 2593533 + -11.3  -2.64274   AGTGGCGTACTCTTC        GGTCGGC-CCGG CATCC CCGGCGTCGACC        TCCCTTTCGAACGCT  62 253
HR116_RS12125 NONE
HR116_RS12130 2597233 .. 2597250 + -14.1  -4.02022   GGCGTCGCATGGAGA             GCCGGCC TTCG GGCCGGC              TTTCTCGTGGTTGCG  90 46
HR116_RS12140 NONE
HR116_RS12145 2601044 .. 2601062 +  -5.9  -3.65827   CAACATGGCGTGTGC             CTCGCGG GAAAA CCGCCAG             TTTACGTGGCGGTTC  57 415
HR116_RS12155 2602023 .. 2602050 +   -17  -4.54727   CCCGCGCCATGCGAG        CGCCGCCAGCCT CCCG GGGTTGGCGGCG         TTTTCGTTTCAGGCC 100 47
HR116_RS12175 2603922 .. 2603939 + -14.1  -4.14392   TGGCCTGAACGAAAA             GCCCGGC GTGA GCCGGGC              TTTTCAGGGTTGCGG  93 33
HR116_RS12190 2605704 .. 2605723 + -16.4  -4.55128   GCGCGCAATGAAAAA            CGCCGGGC ATCA GCCCGGCG             TTTTCGTTTCCGCCT 100 45
HR116_RS12200 NONE
HR116_RS12205 NONE
HR116_RS12210 2609223 .. 2609235 +  -3.3  -4.09243   CGGTTCTTGATCGCC                GGTCG CGA CAACC                TTTTCGAGGAATCTC  58 128
        cysB 2610247 .. 2610265 + -13.1   -4.7497   TCGGCCCATGAAAAA             GCCCGGC CTGGT GCCGGGC             TTTTTCATGGCTGGC 100 46
        thrH 2612268 .. 2612288 + -18.3  -4.66537   GCGCCGCCGATGAAA            GAGCCCGCG GAA CGCGGGCTC            TTTTCTATTCCGGGG 100 43
HR116_RS12240 NONE
HR116_RS12245 NONE
HR116_RS12250 2619945 .. 2619970 + -16.9  -3.85698   GAGTCGAGACGCGAA         GACCTCGCCGA GGCA TCGGCGGGGTC          TTTCTCCGAAAGAGG 100 51
HR116_RS12255 NONE
HR116_RS12260 NONE
HR116_RS12265 NONE
HR116_RS12270 2624663 .. 2624680 + -14.1   -3.7732   CCGAGACATGAAAAA             GCCCGGC CGGA GCCGGGC              TTCTTCATATCGGAA  84 44
        ppsA 2631439 .. 2631456 +  -9.8  -4.75372   CGCTGTATCCGGAAA             GGGCGG GTAACA CCGCCC              TTTTTCGTGCCTCCT 100 49
HR116_RS12300 2632517 .. 2632551 +  -4.1  -3.13522   ACGCAAATGGCGGCT    CCGGTCACGCCGGCGCC GCC GGGGCGGGCG-G-CCGA    TGTTCCTCCGGAGCT  47 47
        rraA 2633112 .. 2633141 + -17.2   -4.7373   TTAACAGCCGTTCCG       GCCCCGGTGACGC AGGCA GCGTC-CCGGGGC       TTTTTGCTGGAATGA 100 47
HR116_RS12310 NONE
HR116_RS12315 NONE
HR116_RS12320 2635444 .. 2635468 +  -4.1  -2.66912   GCTGCTCTGCAGGGC          GGCCCGGCTTA CGA TATGACTGGCC          TGATCTCACTTGAAT  41 63
        sigX 2636110 .. 2636122 +  -3.4  -3.32268   GGAAGTTCTGATAAA                CTTG CCACC CAAG                TTGTGCGGCTGATTG  46 67
HR116_RS12330 2637247 .. 2637274 + -18.6  -3.64703   GGCTGAGCCTCTAAG        GAAAAACCCGGC TCAG GCCGGGTTTTTC         TTTGCCTGGAAAAAG 100 43
HR116_RS12385 2653516 .. 2653533 +  -8.3  -4.25104   TGTCTCCAGCGAAAA             AGCCGCC CTTG GGCGGCG              TTTTCGTCCGACCAG  79 45
HR116_RS12395 2655225 .. 2655240 + -11.8  -5.86965   GCCGGAAACAAGAAA              GCGCCC CGCG GGGCGC               TTTTTTTTGCTGCCT 100 41
HR116_RS12415 NONE
HR116_RS12420 2661153 .. 2661170 + -14.1   -4.4078   AGCGATAAATGAAAA             GCCCCGC GTTC GCGGGGC              TTTTCATTACCGGCG 100 47
HR116_RS12430 NONE
HR116_RS12435 2662536 .. 2662556 + -18.3  -4.54727   CCCCATATTCCGAAG            CGCCAGGCC CGA GGCCTGGCG            TTTTCATTTCCAAGC 100 36
HR116_RS12440 NONE
HR116_RS12445 2662817 .. 2662837 +   -14    -4.564   CCCCATATTTCGAAG            CGCCAGGC CTTGT GCCTGGCG            TTTTCGTTTGCGCTT 100 36
HR116_RS12450 2663279 .. 2663310 +  -7.9  -3.01712   ATCCGGCCGGTTCGC      CAGTTTCGGGCGC AAGGTC GCGCCCTGGGCTG       TGTTCCGGCGAACGG  54 88
         tig 2668997 .. 2669028 + -14.5  -3.38314   TCCTCTCGTTCGAAT      CCCACAAGCCAGC CTTAGT GCTGGCTTGTGCG       TCTTTGAGGCTTCAC  82 46
        clpP 2669749 .. 2669772 +  -5.2  -3.24381   AGACATTCGGCCGCC          TCGTGGGCTT GAAA ATGCCCACAA           TTGCCTTCATCTTGT  48 63
        clpX 2671104 .. 2671119 + -11.8  -5.08255   AGGCATGAAAGAGCA              GGGGCC TTCG GGCCCC               TTTTCTTTTCCGACT 100 33
         lon NONE
        hupB 2674080 .. 2674090 +  -4.6  -2.76189   CCAAGGCTGGCCTGG                 CTGC GGA GCGG                 TAGTTCAGTCGGTTA  44 73
HR116_RS12495 2674171 .. 2674190 + -13.6  -4.38927   CGCCAGTTACGAGAA            GGCGCATC CTCG GATGCGCC             TTTCTTATATCCGCA 100 36
HR116_RS12500 2676144 .. 2676169 + -17.7  -4.25056   AGACCGAGATGCAGA         GAAAAGGCCGC TTAC GCGGCCTTTTC          TTTATTCCTCCCATG 100 40
HR116_RS12545 NONE
        rnhA NONE
        dnaQ 2689694 .. 2689720 +  -6.5  -4.63218   AGCGGAGGCAAGCGC        GG-CGCGCCGAC TTGT GTTGCCGCGACC         TTTTCTTACAAGGGC  78 508
HR116_RS12565 NONE
HR116_RS12570 2693875 .. 2693908 +    -8  -2.77999   CACCAGCAGCGCAGT     GAACGGCAGGGCCT CCTGGA AGGCGCGGCCGATC      TGGTGTTCGTCGGTG  51 444
HR116_RS12580 NONE
HR116_RS12585 NONE
        nudC 2698857 .. 2698870 +  -4.5  -3.05384   CCAGGACGAGGCCCT               GCGGCC ACT GGC-GC               TTGCGTCCGACCGGC  45 340
HR116_RS12600 2700063 .. 2700074 +  -3.6  -3.53343   CCGGGGCGGCGGCGA                TCGC CTGG GCGG                 TTTCGCGAAAGCGTT  51 54
HR116_RS12610 2701952 .. 2701967 + -10.4  -3.04322   CCTGAAATGAAAAGA              GGGAGC CCTG GCTCCC               TCTTCGCGCGTTCGC  62 148
        sohB 2706478 .. 2706491 +  -2.3  -4.07568   CGACAGGGACGAACA               CGCTG TCTT CAGGG                TTTTCACGAGAGGAG  57 49
HR116_RS12640 2707927 .. 2707939 +  -3.3  -4.42238   CCAGACCTTGTTGCG                CAACC GCG GGCTG                TTTTCCTTCCAGTAG  66 447
HR116_RS12655 2709631 .. 2709648 + -14.1  -4.18018   CTCGGGAATGAAAAA             GCCCCGC GGCT GCGGGGC              TTTTCCGTCAGGGCG  93 53
HR116_RS12680 NONE
HR116_RS12685 2714820 .. 2714842 +  -9.8   -4.7173   CCCAGGCGCAGTTTC           TTGCGCAGGC GGC GCTTGCGCGG           TTTTTCCATCTGCTC 100 384
HR116_RS12710 2722550 .. 2722575 + -18.3  -2.58758   AACCTCTGAGTCTCG         CGACCCGCTCC ACAA GGGGCGGGTCG          GTTATCGCGAATTAT  86 32
        nfuA 2723273 .. 2723290 + -12.7   -4.4078   CCGTAAAGCAGAAGA             GGCGACC GCAA GGTCGCC              TTTTCGTTGCCGGCG 100 48
HR116_RS12735 2727220 .. 2727235 + -11.8  -3.81951   GAGGAAACGAAAAAA              GGCGCC CGTG GGCGCC               TTTCGTCGTATGGAA  78 40
HR116_RS12745 2728990 .. 2729013 +  -4.4  -3.16039   CCGATGCTCGTCGAG          CACCGGCAGG GCCT TCAGACGGTG           TTCCTGCAACTGCTT  47 337
HR116_RS12780 2736065 .. 2736118 +  -9.5   -2.5547   CGCCGATCGGCCCGC TGGCGCGGACCTTGCCGTTCTCCAG CAGCAC CAGGTGATCGGCCAGG-C-GCGCCA CTTCGTCTGGCGAGT  54 487
HR116_RS12805 NONE
HR116_RS12810 2743068 .. 2743081 +  -2.3  -3.54424   GACAGCCATGTATAA               TCGCG TCCC CACGA                TTTCCCCCGATCCGG  49 79
HR116_RS12815 2743439 .. 2743468 +  -9.1  -3.54424   TATGCTCGCCGCCCC       TGGGCGAGCCGCG TCGA TGCAGCGCGCCCG        TTTGCCGGAATCCGC  68 151
HR116_RS12820 NONE
        gspD 2746380 .. 2746395 +    -9  -3.35679   TCCAGCGCAGCGCCA              CTGCCA GATC TGGCAG               TTGTCGCTGGCGGGG  63 106
        acpP 2746815 .. 2746849 + -12.8  -5.75342   CCGCGCTTCGATTAC     GCCGGATCGTCCAG CCCGCCC CGGGCCGATCCGGC     TTTTTTTTGCCCGCC 100 134
HR116_RS12835 2747478 .. 2747495 +  -6.9  -3.53012   GATTCGGCTCGGTTG             GAGTGCG CTGC CGCACGC              TTTACAGCCGGACGG  57 89
        lasA 2749197 .. 2749244 +    -6  -4.12188   AACACCGTGTTGATC GC-CGCGCCGCCGAGGGCGCCGA CGA TGGGCACGATCTGCGCCGCGAGC TTTTCCGAATACTGC  66 270
HR116_RS12855 NONE
HR116_RS12860 NONE
HR116_RS12865 NONE
HR116_RS12870 2764448 .. 2764491 +  -9.5  -3.05463   AGTCCGCCGGATTGT CGCCCTGGGTGTGCTGGAG CAGGGT TTCCAGCTTGTCCAGGGCC TTCACTGCCAGGGCT  57 273
HR116_RS12895 2768983 .. 2769012 +  -3.6  -2.63102   TCGTCATTCTCAAGC      TGG-CGACCCGTCA GGGC TGAGGGG-CGACCA       TCATGTACGCATCCT  39 6
        ndhC 2769673 .. 2769701 + -12.4  -3.03159   GATCGCGAGCGCCGA       CCTGG-CGGCGGC GGTA GCCGCTGGCCGGG        TCTTCCCACACTTCC  67 285
HR116_RS12910 NONE
HR116_RS12915 2773221 .. 2773246 +  -9.7  -3.07994   GCTTCGAGGCGGGCG         TCGGCG-TCGGC TGC GCTGGGCGCCGA         TTGCATGACCTTCAG  59 234
HR116_RS12930 NONE
HR116_RS12975 2785978 .. 2786009 +   -16  -2.72511   GAGGCCGCCGCGCAA      GC-GTCCGGCCATTC ACC GAATGGCCGGATAGC      GTTTGCGCCGGTCGC  81 62
HR116_RS12980 NONE
HR116_RS12985 NONE
HR116_RS12990 NONE
HR116_RS12995 NONE
HR116_RS13000 NONE
HR116_RS13005 NONE
        pdxH 2792950 .. 2793003 + -18.4  -2.78816   GTCCCGCGGCCCCGG CGTCGGGCCGTAG-GGCGAATAACGCC ACC GGCGTTATCCGCCGCTGCG-CC-GACG TCTCATGGCGGATAA  86 279
HR116_RS13105 2815607 .. 2815636 +    -2  -3.21276   TTCCATCTCGGCCTG       GTGGCGAGCTTC TGATGC GCCGTTCGCTAC        TCTTCTGCGGCGCGC  43 11
        cobN NONE
HR116_RS13115 NONE
HR116_RS13120 2820307 .. 2820321 +  -4.2  -3.93009   TTTTGCCCGGAGTTC               CCGG ATAATGG CCGG               TTTCCGTTTCTCTTG  58 67
HR116_RS13125 NONE
        metE 2825065 .. 2825097 + -23.5  -3.58269   CCGGCGGGCCTGGTG      AGCGGAACGGGACGC CTG GCGTCCCGTTCCGCA      TTTGCACGTCGGTTC 100 41
HR116_RS13145 2827730 .. 2827747 +  -2.5  -3.89346   GATAGCGGCGCAGGC             GTCGAGC ATCC GCCCGCC              TTTGTGGCATGGCCA  54 65
HR116_RS13150 NONE
HR116_RS13155 NONE
HR116_RS13160 2831881 .. 2831895 +  -4.2  -4.13767   TGGAAGACCGGCGTT               CCGC GTAGCGA GCGG               TTTTCGCCTGGAAGC  63 347
HR116_RS13165 2832459 .. 2832480 +  -9.3  -3.59979   CGTTGCGCAGCGAAA           GCCGCAGGG CAGC CTCGGCGGC            TTTCGGGTGCGAGGA  68 50
HR116_RS13205 2842841 .. 2842853 +  -3.3  -4.83615   ATTTTCCTTTCAGAG                CGCCA ACA TGCCG                TTTTTATGACGGCTC  75 105
HR116_RS13210 2844326 .. 2844359 +  -5.3  -3.05844   TTCGCGACAGTTGCT     CGTGGCGAT-TGACAG AAT CTGTCAGATCGACGCA     TATTCACCTAACGCA  47 126
HR116_RS13215 NONE
HR116_RS13220 NONE
HR116_RS13225 NONE
HR116_RS13230 NONE
        rbsK 2850008 .. 2850018 +  -8.2  -3.30124   GCTACCGGCGGATAA                 CGCC TGC GGCG                 TTATCCGCCCTGCGC  60 57
HR116_RS13280 2857616 .. 2857635 + -16.4  -5.21709   CGGGAACAGGCAAGA            GGCGCGGC GCGA GCCGCGCC             TTTTTTCGTCTGGCC 100 45
HR116_RS13285 2858619 .. 2858642 +  -9.4  -4.15044   TTCGGGCAGCAGGGT          GACGCCGAGG CCGG CCACGGCGGC           TTTCTTGCGCAGGAC  75 255
HR116_RS13295 2860105 .. 2860135 + -16.3  -3.28712   TGATCCCCGCGTCAT      CG-GAAAACCCCGC TTCG GCGGGGTTTTCGCG       TTGTGCGCAGCGGCG  88 38
HR116_RS13300 2860511 .. 2860528 + -14.1  -3.66178   TGCCGGAATGAAAAA             GCCCCGC GGAT GCGGGGC              TTTCGCGTTGCGCGA  81 71
HR116_RS13310 2862933 .. 2862953 +  -7.5  -4.07568   GCAAGGAGCCGCTGA            TCCGCGC CATCTAC GCGCGGG            TTTTCGCGGCCGCCG  70 179
HR116_RS13315 2863479 .. 2863520 +  -6.3  -3.35996   GCGTTCAGCGTCGCG CGGGCCTGCGTCGGGTC CTCTTGCC GTCCCGGCGCCTGGCCG  TTCTGCATGGCGATC  55 71
HR116_RS13325 NONE
HR116_RS13330 2864836 .. 2864852 + -15.1  -4.20025   CCCGAATACGAAGAA              GCCCCGC ATC GCGGGGC              TTTCTCTTGGCCGTT 100 50
HR116_RS13345 2868874 .. 2868889 +  -2.5  -3.21416   CCGAGGAAGCGTCTG              GCCAGG AGCCG CC-GGC              TTCCTGATACGACTC  43 3
        pqqF 2871531 .. 2871545 + -11.4  -3.59979   TAATCGGCTCCGCCA               CGACCG GCC CGGTCG               TTTCACCTCGCGGAG  73 256
HR116_RS13355 2872783 .. 2872827 + -13.3  -3.17212   ACCGCTACTTTCGAA GGACCCCGCCGCGACCCAAGT AGG ATAGGGGCCGCGGCGGCGCCC TTCGTAGAATGCTGG  73 42
HR116_RS13360 NONE
HR116_RS13365 NONE
HR116_RS13380 NONE
HR116_RS13385 NONE
HR116_RS13390 2880494 .. 2880537 +  -9.6  -3.14931   CCCCAGGCCTGGATC GCCA-CC-GCCCTGGCGCCGG AGAGG TCGGCGCC-GCGCAGGTTGGC TTGCTGCAGGCTGGC  59 367
        pedF NONE
HR116_RS13410 2885220 .. 2885239 +   -15  -5.78622   GGCGGGTTCTGGCGC            GACGCGGC CCTG GCCGCGTC             TTTTTTTTCGCCTCG 100 138
        pqqA NONE
        pqqB NONE
        pqqC NONE
        pqqD NONE
        pqqE NONE
HR116_RS13440 NONE
HR116_RS13445 NONE
HR116_RS13450 2893734 .. 2893766 +  -3.9  -3.53012   CCAGGCCGACCCAGG      GATTCGGCGCGCTCC ACA GCAGCAGGCCGAGGC      TTTCGACGCCGAGGC  51 345
HR116_RS13485 NONE
HR116_RS13490 2900512 .. 2900565 + -28.9  -3.53224   AATGAGTTTCTGAAT CG-CGGCCCGCGCGGCCGGCGCCT CCACGCA AGGCGCCGGCCGCGCGGACCGTCC TTTCCAGAGGGCGTA 100 28
HR116_RS13495 2901868 .. 2901901 + -13.1  -2.62184   CCGCTCGCGGCGTGA     TCGCGCCATGTCCTT TCGC GGGGGCATGGCGCGC      TCGTGTCCAGGGAAC  67 53
HR116_RS13500 2903781 .. 2903792 +  -2.2  -4.56597   GGGGGTGACGAAGGC                CAGC GAGG GTTG                 TTTTTCCGCCAGCAG  67 329
HR116_RS13540 2913309 .. 2913339 + -16.3  -3.31322   GGGTGATGTCAGGTA      G-GGCGGATAACCG CCCG CGGTTATCCGCCGC       TTCTCAGGCCTTGGC  88 59
HR116_RS13575 2921532 .. 2921569 + -12.1  -2.69151   AAAGGACGGCGGAAT  TCAGGCTTGCGCGCCGG ATAGCG CCGGCGCGTA-GCC-GA   TCATCTGTCGCAGCA  66 48
        amrR 2927019 .. 2927069 +  -7.5   -3.1247   CGACAGGCGCGCCTC GGC-GTCGGTACCGATGCGCAGG CTGTCGA CCGGCGCG-CGATGCCGGCTGCC TTCGATCTCCACGCT  54 154
HR116_RS13605 2928657 .. 2928677 +  -3.9  -3.44051   TGCGCGCCATCCGCA            TACTTCGTC CAT GTCGAAGGA            TTCTCATGATCAAGA  51 47
        galU 2929546 .. 2929572 +   -23   -4.8048   GTTCCCGATGAAGAA         CGCCGCGTCCCC GAT GGGGGCGCGGCG         TTTTTCGTATGGGGC 100 49
        gorA 2931641 .. 2931664 + -18.2  -4.20136   CCGCGTCTGAACGAA          GAAGCCGGCC CCTG GGCCGGCTTC           TTTCATTTTCGCGCT 100 42
HR116_RS13635 NONE
HR116_RS13640 2934383 .. 2934395 +  -6.2    -3.524   GACCAGCAGGGCCAT                GGCG ATCAG CGCC                TTGTATGGGTCGATG  56 253
HR116_RS13655 2936390 .. 2936404 +  -2.8  -4.01158   TGCGCAAATAGCAAA               TGCTAA TCA TTCGCA               TTGTTTGCTAGAGTT  58 73
HR116_RS13660 NONE
HR116_RS13665 2938063 .. 2938089 + -11.5  -2.63715   CGCGCCGGCTGAGGA         TGCCTCAGGCG AGGCG CGCCTGCGGCG         TGATCTGGCGTGGGT  62 29
HR116_RS13675 2941063 .. 2941073 +  -3.2  -2.78351   GCCGGAAATATTGTG                 TTGG TGG CCAG                 TGGTTGGATGGTTTT  40 106
HR116_RS13680 2942743 .. 2942769 +    -5  -3.05343   ACAGGAAGAAGAACG         CCATGCCCAGCA GCA TGCTCGCCAGGG         TATTGCGGGTATAGA  45 185
HR116_RS13695 2945651 .. 2945685 + -26.4  -3.67775   CACACCGTGTGAGCA     TGGGCGGGCGGCTCCG GTC CGGCGCCGCCCGCCCG     TTCTTCCGTCGAGGT 100 29
HR116_RS13700 2947295 .. 2947312 + -14.1  -3.74077   AGCCCCCCATCTGAA             GCCCGCC TCAT GGCGGGC              TTTGGCTATCTGCAG  84 146
        sstT 2948917 .. 2948930 +  -9.5  -4.39696   GGGTCACGGAAGAAA               CCGCC TTCG GGCGG                TTTCTTCGTTTCGCC  91 51
HR116_RS13710 2949960 .. 2949972 +  -4.7  -4.03234   ACGTCGCCGACCCGG                AGCGC ATG GCGCG                TTTCTATGAACAGGC  63 71
HR116_RS13735 2955701 .. 2955740 + -14.2  -2.88386   CGGCCGTTCTGAAAC  CGGG-CGGGCGGATGATGC GGC GCGGCGTCCGCCCGTCCCC  CTTGTTCTGGCCTCT  77 29
HR116_RS13745 NONE
HR116_RS13750 2959526 .. 2959580 + -11.4  -3.14564   GGGTCAGCATCGCCA GCCG--CTGAGGCG-CGCGCCCGGCGG CGAG CCGGGCGGCGCGACGCTTCAGAACGGC TTGGTCGGCAGGTAC  67 18
        cynR 2961985 .. 2961995 +  -2.4  -3.02144   TCGAGGCCATCCCCG                 AGGC GAC GCCC                 TGTTCGGCGGGATCG  41 265
HR116_RS13775 2964414 .. 2964456 + -12.1  -3.02043   CTGGGGAAGATTGTC GG-GTGG-GGCGAATGACGCC GGA GGCGTTATCCGCCGCCATGCC TATTCGCCCGCGCTT  68 259
HR116_RS13780 NONE
HR116_RS13785 NONE
HR116_RS13790 NONE
HR116_RS13795 NONE
HR116_RS13800 2973090 .. 2973100 +  -2.4  -2.62958   GAAAGGTTCTTTCCA                 GACG CCC CGGC                 GCTTTTCTTAAGATC  38 74
HR116_RS13805 2974440 .. 2974450 +  -4.6  -4.49756   GTTATTCGCCCTGCG                 GCTC CAG GGGC                 TTTTCGTCTTTGCCG  71 97
HR116_RS13810 2975854 .. 2975890 +  -9.9  -3.05844   ACGAAGCGCGCCTCG    TCGTCGTCCTCGCCCTC GGC GCGGGCCAGGTCGGCGC    TGTTGCCGTAGGAGC  60 85
        fusA 2988253 .. 2988287 + -21.4  -3.53012   GGGCCGCTGAGAGCC     GCCGCGCGCCGCCG AGGCCAG CGGCGGCGCGCGCC     TTTGCGGGAGCGGCA 100 31
HR116_RS13855 2991358 .. 2991386 + -15.3  -4.07568   TGGGCGAATGAAAAA       GGGCGCGG-GCC AGTATC GGCGCCGCGCCC        TTTTGCCGGAGGAGA  95 370
HR116_RS13875 2995252 .. 2995271 +  -5.6  -4.07568   CCAGGCGCTGGGCCT            TGTCGCTG CCGG CCGCGACG             TTTTCGGCCAGGAGC  64 409
HR116_RS13905 3003237 .. 3003248 +  -7.2  -3.33261   TAGGTTTCCTCCGTC                CCCG TTGC CGGG                 TTGTCAACGTTACAC  58 188
HR116_RS13910 3004544 .. 3004554 +  -2.4  -3.03243   GCTTCTCGCCGTGGC                 CGTC TGA GCCG                 TCTTCAACCATCGCT  41 19
        asnB NONE
HR116_RS13920 NONE
HR116_RS13925 NONE
HR116_RS13930 NONE
HR116_RS13935 NONE
HR116_RS13940 NONE
HR116_RS13945 NONE
HR116_RS13950 NONE
HR116_RS13955 3015718 .. 3015747 +  -9.3  -3.15544   CGATTGATTCCCTAC      CGCGCGCCACGGG AACAGC CCCG-GGCGC-CG       TTCCTCAACCTCCAG  61 34
HR116_RS13960 NONE
HR116_RS13965 3017672 .. 3017704 + -11.1  -2.58544   CGGCAGGTGGTCGCG      GACCCGGCGCGGCGC CGA GCGCAGGGTCTGGTC      GTTGTGCACGTAGCG  59 423
HR116_RS13980 3020917 .. 3020934 +  -2.5  -2.62184   TGCCGACTATGACCT             GGCCCGC TGAA GCGCCCC              TGATGTCGCCGCCGC  38 16
HR116_RS13985 NONE
HR116_RS13990 3022675 .. 3022691 +  -2.1  -4.08958   ATGGTCTAGCTGCTT              TTCGTGG CTG CCTCGAC              TTCTTGTTTCGCCGT  57 94
HR116_RS14000 NONE
HR116_RS14005 NONE
        moeB NONE
HR116_RS14015 NONE
HR116_RS14020 3028885 .. 3028911 +  -2.3  -3.49419   CCAAATTCAACCAAT        GGAGGC-ATCATG ACG CA-GACCGCCTCC        CTTTTTCTCCAGGAC  47 13
HR116_RS14025 3029898 .. 3029932 +  -8.5  -3.69395   AGCAGGGGGGCGAGG    CGGCAG-AGGTCGGCG CAGT CGCCGGCGTGCTGGCG     TTGTTCCCTGCTGGA  65 295
HR116_RS14035 3032290 .. 3032320 + -11.1  -4.07568   GGCGGCCTGCCGTTC      GGTCT-GGCGCGGC GAGG GCAGCGCCAAGGCC       TTTTCCCCGGCCAGG  81 254
HR116_RS14070 3038825 .. 3038840 +  -4.6  -3.29511   AAAATCTCGTTGGAC              GCTGAC CGCC GTCCGC               TTCTACAAACCTGCC  50 69
HR116_RS14075 3039741 .. 3039755 +  -4.2  -3.04144   GGCGCAGGGCATCCG               GCTCCA GGC TGTAGC               TCTTGCCGCTCGGCG  44 81
         ada 3041957 .. 3041974 +  -9.1  -2.89564   CCCGGAATGCAAAAA             GCCCACT CGAT GGTGGGC              TCTATGCAATGGGGC  58 64
HR116_RS14110 NONE
HR116_RS14115 3047612 .. 3047631 +  -6.4  -2.87132   TCGGAAAAACCGAAC            CAGCGG TTCGCCTT CCGCTG             TCTGTCGCCGAGGGC  50 43
HR116_RS14120 NONE
HR116_RS14125 3051011 .. 3051031 + -14.7  -3.30441   GTCATCGGCAATACG            CCGTGCACG CCG CGTGCGCGG            TTGTGGCGGATGGTG  82 230
HR116_RS14150 NONE
HR116_RS14155 NONE
HR116_RS14160 3059317 .. 3059353 + -11.6  -2.78679   GCGCAGGTGGTTATC   CGTGTCCAGTAGGCGCG CGCT CGCG-CTGCTGGCCATG    CTTTGCCTCGCGCCG  66 14
HR116_RS14165 NONE
HR116_RS14170 3060979 .. 3060994 +  -6.1   -5.1287   TGCCGAGGTGCGTTG              TGCCG AAGTCC CGGCA               TTTTTTCCCTGTCAC  87 119
HR116_RS14175 3061574 .. 3061593 +  -7.2  -2.80492   CGGGCGGAGCCTGGC            CAGGCATGA GTT TCA-GCCTG            TGGTTGCTGGTACTG  52 49
HR116_RS14180 3063222 .. 3063240 + -14.6  -2.52896   AGCGAGAAGTCGTCG             CCCAGCAG CGC CTGCTGGG             TGGCTTCGCCGATGA  71 304
HR116_RS14195 NONE
        ligD NONE
HR116_RS14205 NONE
HR116_RS14210 NONE
HR116_RS14215 NONE
HR116_RS14220 3069381 .. 3069397 +  -9.3  -3.09516   CATTCCTCCCGACTG              ACGCCGG CGC CCGGCGG              TTCCGTCGTGCGGAC  60 343
HR116_RS14230 NONE
HR116_RS14235 3072788 .. 3072803 +  -2.5   -3.7347   AAAAGAATAATTAAG              TGCCT CCGCCT GGGCA               TTCTTCGGTATTCGC  52 521
HR116_RS14245 3073384 .. 3073412 + -12.5  -4.25104   GCGCAGTGAAGTGAA       TGGGGCGGA-GC AGGGAG GCATCCGCCCCA        TTTTCATGCCCAGGA  95 46
        katE NONE
HR116_RS14255 NONE
HR116_RS14260 NONE
HR116_RS14265 3077593 .. 3077605 +  -3.4  -3.28712   CCGGAGGAGCGCGCC                TCGA TGAGT TCGA                TTGTCCGCAACAGCG  46 166
HR116_RS14270 NONE
        treS NONE
        glgB 3085089 .. 3085127 +    -3  -3.34398   GCTGCTGCTGCGTCC  G-GCCGGCTGATTCAGG CCTGGC CCTGGTGCAGGCGGCGC   TGTTTGCGGCGCAGG  46 16
HR116_RS14345 3102097 .. 3102116 +   -10  -3.34398   AGCTGCGCACCATGA            GCCTGGCTC GCT GAGCC-GGC            TGTTTCAGCGCCGGG  66 12
HR116_RS14350 NONE
HR116_RS14355 3104340 .. 3104363 + -10.3  -3.05384   GAGCCTCCCACCTTC          CGTGGGC-GC TGGTT GCTGCCCACG          TTCCGTGCCGGCAGG  62 56
HR116_RS14360 3104917 .. 3104957 + -10.4  -2.72991   AGGGGAATGCCATGA G-GCGGTCCCGGGCC-TTGC TGC GCGACGGCCAGGAACCGCGC TCATTGCGGATCTCC  60 55
HR116_RS14365 NONE
HR116_RS14370 NONE
HR116_RS14375 3107071 .. 3107084 +  -2.3  -3.17229   AGAGGAGGGCGAGAC               GATGG CCAG CCAGC                TGTTCCTGATCAGCT  43 80
HR116_RS14380 3107543 .. 3107559 +  -6.5  -3.65046   AGTCGTGGTCGCGCA              GTTCCTC CTC GAGGATC              TTCTTCAGGTACAGG  59 275
HR116_RS14400 3111438 .. 3111471 + -10.9  -3.03771   GCCCAGGTAACACAT     CGTCGCCAGCAGCAG GGCG CTGCCGCTGGAGAGG      TGTTGCACGCTGTCG  62 413
HR116_RS14410 3112442 .. 3112481 + -10.6  -2.55351   GGTTACCGACCCCGG  CCAGCGCCGCGTTGACCCG TGC CAGGTCGA-GCGCCGCCGG  ATTGATATCCAGCCC  59 413
HR116_RS14425 NONE
HR116_RS14430 3116244 .. 3116258 +  -5.6  -3.14344   ATCGTGCCTGGTTCC               TGGCCG GCA CTGCCA               TTCGTCGCGCCGATG  51 71
HR116_RS14435 3116892 .. 3116902 +  -5.4  -3.21912   GCTTCCGCCTGCCAG                 TGGA GTA TCCA                 TTCCTAGCTTCCCCG  48 8
HR116_RS14445 3118958 .. 3118986 +  -4.6  -3.53012   CTGTCGGTGAACGAA       CGCG-GGTAGACCT GGT AGATC-ACCGCGCG       TTTCCACCAGGGCGG  52 190
        hcnA NONE
        hcnB NONE
        hcnC 3122213 .. 3122225 + -10.5  -2.52543   GCGGAGCGGGGCGGG                CGCCG GAC CGGCG                TCCGTTCCGCACGGT  59 60
HR116_RS14470 3122932 .. 3122955 + -12.4   -5.0133   GGTACCGCCAGGAAA          TACCCGCCCC GCAA GAGGCGGGTA           TTTTTTCGACCCGTC 100 41
HR116_RS14475 NONE
HR116_RS14480 NONE
HR116_RS14485 3125316 .. 3125343 +  -4.1  -3.03771   ATCTGAAAAGGTTCT       GC-GCACG-GCCC GGCA GGGCCCGTGAAGC        TGTTCGGCAATCTGG  45 35
HR116_RS14490 NONE
HR116_RS14495 3128109 .. 3128128 +  -7.8  -3.16881   ACAGGAAGATCTCCG            TCGGGTGG ACCA TCACCCGG             TTGCTCACCTGGGTG  54 136
HR116_RS14540 NONE
HR116_RS14545 NONE
HR116_RS14550 3138927 .. 3138951 +  -7.9  -2.53263   GACGAGAGACACATC         GCC-TGGAGC CGCAGC GCTCCACGGC          TCGCTTCGGCCTGGG  50 142
HR116_RS14555 NONE
HR116_RS14560 NONE
HR116_RS14565 3142969 .. 3142981 +  -6.2  -2.78712   GAGCCCACAGGAGGA                GCCG AGATG CGGC                TGATTCAATTCGAGG  46 47
HR116_RS14570 3144074 .. 3144084 +  -8.2  -2.89564   CCGGCCATCCCCGGC                 GGGG CTT CCCC                 TGTATGAGGTCGACA  55 129
HR116_RS14575 3145745 .. 3145777 +  -7.6  -3.20382   AGGTGTGCAGCAGGA     CACTGGAGGAGCCCC GGAA GAGGC-CCGCCGGTG      TTCCTGCCTGTACCC  56 88
HR116_RS14580 NONE
HR116_RS14585 3149314 .. 3149329 +  -3.2  -2.82521   AACCCAGAAGGAGAA              CGCC GATGTCCA GGCG               CTTGCTTTTCGTGGC  40 79
HR116_RS14590 3149844 .. 3149881 +  -2.8  -4.26076   CGGCACCGGCCGCGT  CCAT--GCCTGGGCGA-GT TCC GCATCGCCCAGGCGCATCG  TTTTGCTCAGCGTGC  64 47
HR116_RS14600 NONE
HR116_RS14605 NONE
HR116_RS14610 NONE
HR116_RS14615 3155618 .. 3155633 +  -6.1  -2.69151   GCCGCGCAGGTGTAC              CCGCA GCGCGA TGCGG               TGGTCTATGGCGCAA  46 208
HR116_RS14625 NONE
HR116_RS14630 3159247 .. 3159261 +  -4.2  -2.87132   GCAGCGACCGCATGG               CAGGCT TTG AGGCTG               TCTGTCGCCCGAGGC  44 69
HR116_RS14675 3170762 .. 3170779 +  -4.7  -2.64933   CCATGAGAGGAACAA             CGTCCGG CAAC CCGGGAG              TGATGTGAATGAATG  43 61
HR116_RS14680 3172258 .. 3172268 +  -3.2   -3.1544   CAGTTAACGTGGAAC                 CGAG AGA CTTG                 TTCGCTCTGCTCTCA  44 128
HR116_RS14685 3173007 .. 3173022 + -11.8  -5.75342   TGGCCCTGCCTTTTA              CCGCCC TTCG GGGCGG               TTTTTTTTGCAGGCA 100 119
HR116_RS14690 3174936 .. 3174946 +  -2.4  -3.41602   AAAAATAATTACGAA                 AGCC TCA GGCC                 TTGTCATCGCGTGCA  47 69
HR116_RS14695 NONE
HR116_RS14700 NONE
HR116_RS14705 3180450 .. 3180460 +  -6.8  -3.72374   TCAGGTTGGTGATGG                 TGCG CGG CGCA                 TGTTTATTCATGGCC  61 520
HR116_RS14715 NONE
HR116_RS14725 NONE
HR116_RS14730 NONE
HR116_RS14735 NONE
HR116_RS14740 3189231 .. 3189246 +  -2.4  -3.28791   GGGCGCGAAGACTAG              GCACCG GTAC TGGAGC               TTATCCGGCGAACCT  45 76
HR116_RS14765 NONE
HR116_RS14770 NONE
        tcmP 3195302 .. 3195312 +  -6.8  -3.24032   GCCCCTTCTCTGGGC                 CTGG CTG CCAG                 TCTTGATTGCAAGCT  53 133
HR116_RS14780 NONE
HR116_RS14785 NONE
HR116_RS14790 NONE
HR116_RS14795 3199265 .. 3199303 + -14.7  -3.54741   CGAATCGCTAGGTCA  CTG-ATCAAGCCGGGCTG ATTC CGGCTCGGCTTGATACGG   TTTAACGAGCTACTG  85 157
HR116_RS14845 3214710 .. 3214724 +  -2.7  -3.08046   TCTCCAGGATCTTGA               CAGGC CACTC GCCAG               ATTTTGGGCTCAACC  44 372
HR116_RS14870 3218239 .. 3218257 +  -2.2  -2.52464   GTATCTCCATCACCC             CACGAGGG ATT CCCATGAG             TGAATTCAACGACCG  37 61
HR116_RS14875 3219002 .. 3219034 + -17.7  -3.73509   GCGCTGAGGGCCGCC      GATGCCGGACGTCGT ATC GCGACGTCCGGCGCC      TTTGCGGTTTCCTGT 100 34
HR116_RS14880 NONE
HR116_RS14885 3220614 .. 3220626 +  -6.9  -2.86271   TTGCCAGCAGGAGCT                GTCGC GCG GCGGC                TGGTTCTGGTAGAGC  50 1
HR116_RS14890 NONE
HR116_RS14895 NONE
HR116_RS14900 NONE
HR116_RS14905 NONE
HR116_RS14910 3227759 .. 3227775 +  -3.6  -3.41051   TCCTGCAGACCATCG              CCCGCT ACCGG AGCGCG              TTCTGATGCGGATCG  49 3
HR116_RS14915 3228943 .. 3228954 +  -2.2  -3.14931   CACTGTTCAACGACA                TGGT GGGA ACCG                 TTCATGGCACGTAAG  43 0
HR116_RS14920 NONE
HR116_RS14925 NONE
HR116_RS14930 NONE
HR116_RS14935 3234024 .. 3234052 +    -6  -3.35996   ACAGCTCGAGCACGG       GGCCGAGGCCTGAG ATG CTC-GGC-TCCGCC       TTCTGGCTGACCCTG  52 13
HR116_RS14940 NONE
HR116_RS14945 3236605 .. 3236628 + -17.4  -3.60805   CGCGCTGACGCCCTC          GGCCCGGTGC GCCT GCGCCGGGCC           TTTCCCCTCCCGTCT 100 33
HR116_RS14950 NONE
HR116_RS14955 3239874 .. 3239932 + -13.6  -3.00298   TGGCTTTCATGAAGG CC---TCCATCTGCGTAACGTTACGCAAT CAGA ATAGCGTAACGTTACGTAGATGGACAGGG TCTATGCTTAGAGCG  75 325
HR116_RS14970 NONE
HR116_RS14975 NONE
HR116_RS14980 NONE
        lpdA 3245705 .. 3245731 +   -18  -5.14563   CCACCGGCGCACATT         ACCCCCTTGCCC GTC GGGCAAGGGGGC         TTTTTTCGTGGCCGC 100 68
HR116_RS15000 3249321 .. 3249342 + -18.7  -3.34344   CCGACTGACCGCCCT           GCGGCCGCC CGCC GGCGGCCGC            TTCCTTCAGCCCTCC  93 33
        pvcA NONE
        pvcB NONE
        pvcC NONE
        pvcD 3253642 .. 3253668 +  -9.3  -3.64487   GCCGCCTATCCGTGA         CGTCGGCGGCG GATAA CGCCGGTGGCG         TTATTCGCCCTATCC  68 66
HR116_RS15030 3256234 .. 3256256 + -18.4  -3.54459   CGCGGCTAGCGGCCC           GCCGCCGGCG CGT TGCCGGCGGC           TTTCGCACGGCTTGA 100 32
HR116_RS15035 3257068 .. 3257078 +  -6.8  -2.53382   AGCCCCAGGAGGAAC                 GCCA GCA TGGC                 TGACTTCGAGATCCT  48 12
HR116_RS15040 3258005 .. 3258045 +  -2.1  -3.01712   AACTGCTCGACCGCG  AGCGCCGCAGGAGCGCCTG AAC CCGCCGCCCACGCGGCACC  TGTTGCGACAAGAAC  41 6
HR116_RS15045 NONE
HR116_RS15050 3260398 .. 3260433 + -20.4  -2.78712   GACGGCGAGGCGCCT    GAAGGCCGCGCCGGGC CGAC GCCCGGCGCGCCGTTC     TGCTTCACTTGCCGG  91 24
HR116_RS15055 NONE
HR116_RS15060 NONE
HR116_RS15065 3264781 .. 3264824 +  -4.3  -3.05384   TCCGGGGCGATCCAG TGCAGCATGGCGGGCTCCG TCGCGT CGCGGCCCTCCAGGTAGCG TTCGCTGGCGCAGAG  45 414
HR116_RS15080 3266940 .. 3266953 +  -3.8  -3.65046   AGACCGACAACACCA               GGCT TGCCGC AGCC                TTGTTGCCGTGCGCC  54 447
HR116_RS15090 NONE
HR116_RS15095 3268923 .. 3268939 +  -2.1  -2.62184   CGCCGCCGACAGCCG              CTGCGCG ATG CGCCTGG              TGCTCTAGACGGCGG  38 1
HR116_RS15100 3271256 .. 3271273 +  -9.9  -4.13767   TCATGATTGGCTTGA             CCTCAAG TTTG CTTGAGG              TTTTACCCTGGGCCG  81 515
HR116_RS15110 3272124 .. 3272140 +    -5  -3.42147   AGGATCACCTGGTCG              GCGCCG AGCCG CCGCGC              TTCCTCTTCCTTGCC  51 450
HR116_RS15120 3273914 .. 3273927 +  -6.7  -3.12936   GGCGCTTGCAATACA               TACGG ATAT CCGTA                TATTCAGCTTTCCAT  53 55
HR116_RS15125 NONE
HR116_RS15130 NONE
HR116_RS15135 NONE
        arsH 3277313 .. 3277364 + -13.4  -3.69092   GACAACTGGGTAAAG CTCGCGCCGTCGCCCTTCAGCCGC GCCA GCGGCCGCAGGGCGCCATCGCCGG TTTCCAGTTCCTCTT  79 522
HR116_RS15150 NONE
HR116_RS15155 NONE
HR116_RS15160 NONE
HR116_RS15165 NONE
HR116_RS15170 NONE
HR116_RS15175 3283586 .. 3283597 +  -5.8  -3.87815   GGACAGGTGGAGGCG                CAGG CAGG CCTG                 TTTCTCGCGCTCCAG  60 254
HR116_RS15295 NONE
HR116_RS15300 3317914 .. 3317940 + -22.3  -4.18018   CCATGGACGAAGAAA         GGCCCGCCCGG TCATC CCGGGCGGGCC         TTTTCCATCCGGCGA 100 56
HR116_RS15320 3322248 .. 3322265 +  -2.5  -2.81133   AGACAGGAACAAGAC             CGCGGCG GCCA CGGAGCG              TCTAATAGGTACATC  39 74
HR116_RS15325 NONE
HR116_RS15330 3324250 .. 3324262 + -10.5  -3.04144   GCGTAACGGCGGATA                GCGCC TGC GGCGC                TATTCGCCCTACCCG  62 276
HR116_RS15340 3326126 .. 3326145 +  -2.1  -3.05384   TGTCCGACAAAGATA            GCGCT ACCCCGAAAA AGCGC             TTCAATGAAACAGCA  41 52
HR116_RS15345 NONE
HR116_RS15350 3327734 .. 3327771 + -19.9  -2.90496   GCCAGCCGGCGCCAT   GCCTTTGCTCCCGCCCC CCAC GAAGCGGGAGCAAAGGC    TGATTTCCGGCAAGG  93 42
HR116_RS15355 NONE
HR116_RS15360 NONE
HR116_RS15365 3332665 .. 3332714 +   -13  -3.28912   CGCGGACCGTCCAGG TGCGCGTCGGATCGGCGCTGGAA AACGC TTCCACCGCCGATTGGAT-CGCA TTGGTGTGGATGTGC  73 441
HR116_RS15400 3339768 .. 3339787 +  -5.6  -3.23692   AGCGGAACGCCTGGC            CGCGCAGG TCGA TCTCCGCG             TTGCTGATGGTAGTC  51 88
HR116_RS15415 NONE
HR116_RS15420 3346305 .. 3346336 +  -5.7  -2.60194   CGCGGGTGGTCCCCT      GCACAGCCCCGCC GCTTCG GGCTAGGATGTGC       CTTCGTTCCCCCGGT  46 118
HR116_RS15425 3347333 .. 3347351 +  -4.4  -2.78384   CAGTCGAGGCTTTGT             CGGTTGCG TGA CGCGCCTG             TGTAATCGGCAGCGA  42 89
HR116_RS15430 3348743 .. 3348782 + -16.5  -2.70476   TCCGAAGTAGTCCGC CGC-CGGGC-GCAGCCGCGC CCG GCGCGGC-GCTGCTCGAGCG CTTGTCCTTGAAGAT  81 31
HR116_RS15435 NONE
HR116_RS15440 3350604 .. 3350619 +  -3.2  -3.03243   AAGCGCATCCCCATC              CTTTCG TCCA CGGAGG               TATTCCGCCATGGCT  43 40
        ugpC NONE
HR116_RS15450 NONE
        xylB 3354738 .. 3354751 +  -4.5  -4.01071   GGAGCACCTGCCTCC               GCGAT AATG GTCGC                TTTCCTTCCTCTTCT  61 19
HR116_RS15460 3356044 .. 3356055 +  -7.2  -3.09492   CGATCTGCTTGCGCG                CCGC CGCC GCGG                 TCTTCGCGTTGGCGG  52 352
HR116_RS15470 NONE
HR116_RS15475 NONE
HR116_RS15480 NONE
HR116_RS15485 NONE
HR116_RS15490 NONE
HR116_RS15495 3363852 .. 3363884 +  -7.5  -3.53012   GAACAAACGCCTGTA      GAATCCGCCCTCCCG GCC TGGGAGGGCTGGCGC      TTTGCCGAGGGCGAC  60 25
HR116_RS15500 3365637 .. 3365666 + -14.9  -3.06915   CACCGATTCGCTGTG       CCGGTGCACCGCC AGCG GGCGGTGCCCCAG        TTCGATGGGCTGCGT  74 505
        tssB NONE
        tssC 3382347 .. 3382367 +  -2.6  -2.71712   TCCAGGAGTCAGATG           CGATGGATG CGAT CATTC-TCG            ATTTCGGCAGCGACA  39 97
HR116_RS15575 3382851 .. 3382880 +  -3.3  -3.02144   TGGTCAAGTGACCGG       GCGCCGACATGTC CGGA GCCCTGCCGCCGC        TGTTCGAGCGCCTCA  43 30
        tssE NONE
        tssF NONE
        tssG NONE
        tssH 3388607 .. 3388621 +  -3.5  -3.59979   AGCGTCCCGAGGCAT              CGCGGC ATCC GCC-CG               TTTCCGATGGAGAAC  51 40
HR116_RS15600 NONE
HR116_RS15605 NONE
        tssI NONE
HR116_RS15615 3393365 .. 3393382 +  -4.7  -3.64205   AGACCAGCCCATCGC             GCTCGCC GTGG GGCTGGC              TTGCTGTTTTTCTGA  55 495
HR116_RS15625 3394367 .. 3394410 +  -5.2  -4.07568   CAGTCCCATCCATGA GGGGCG-CGCCTGCGCGCCGG CCTCA CCGG-GAGC-GGCGACGCTCG TTTTCAGCAGAGGAA  63 161
HR116_RS15630 3395905 .. 3395918 +  -3.7  -3.28712   GCTGCGCAGGGCGAA               CGAGG CCAC CCGCG                TTATCCGCCGACAGG  48 293
HR116_RS15650 3399878 .. 3399915 +  -8.2  -3.16564   TTCCGCCGCCTGATC   CTGTTTGCCGCGCGGC CGTCGA GCCGCGCGGCTTGCGC    TCTTCCCTTCCCTTC  58 28
HR116_RS15685 3408203 .. 3408227 +  -4.9  -2.87132   ATATCTGGCAGTGCC         CAGCCTGCCG ATCCAG CGGC-GGCGG          TCTCTCCACGCACCG  46 73
        pvdR NONE
        pvdT NONE
        ompQ 3412842 .. 3412881 + -12.8  -3.23638   GCCAGGGTCTCGCGC  GGAAAGACTGAGGCCCGCG TTG CGCGGGCCTCC-TCCATCC  TTACTCGCTCTTTCG  73 15
        pvdM 3416128 .. 3416143 +  -2.5  -2.70354   CCGCAACGGACCTCC              CGATG AACGAC CGTCG               TACCTTTCTCAAGCA  39 46
        pvdN NONE
HR116_RS15720 3418311 .. 3418338 + -22.8  -3.57144   AGGCGGACGAAGAAA        GGCCGGAGCGAC GCGG GTCGCTCCGGCC         TTTGCGCATCCGCGA 100 40
HR116_RS15730 NONE
HR116_RS15735 3423785 .. 3423806 + -17.3  -5.14563   CCTTCATGAAAAAAA           CCCGCCAGG AGAA CCTGGCGGG            TTTTTTCATGGCGAA 100 78
HR116_RS15755 NONE
HR116_RS15760 NONE
HR116_RS15765 NONE
HR116_RS15770 3455190 .. 3455206 +  -2.1  -4.70266   CCATTGATCGCACAT              CGACTCC ACA GAAGGCG              TTTTTCCATGCTGTT  72 34
HR116_RS15775 NONE
HR116_RS15780 NONE
HR116_RS15785 NONE
HR116_RS15790 3458757 .. 3458781 + -22.9  -5.52384   CCTCGTAACGAAAAA          GGCCGGGGAGC GAT GCTCCCCGGCC          TTTTTTTCGTCGACA 100 47
        treA 3465614 .. 3465672 +  -9.6  -3.14564   GCAGCTCCGGCGGGC GGTAGCGGGCCAGCAGCTC-C-GG-GCTGG CCA CCAGCACCTGCGGGCTGCGTGCCAGC-ACC TTCATCACCAGGTCG  59 421
HR116_RS15830 3467162 .. 3467173 +  -7.2  -3.54459   GCGCAGGAAGCGCGG                GCCC GGCC GGGC                 TTTGCCCGAAATTCA  62 66
HR116_RS15835 NONE
HR116_RS15840 3468675 .. 3468687 +  -3.3  -2.64616   CGCGCCATTCCCCGG                CCGTG GCC CACCG                TCCTGTCGCTCGGCC  39 120
HR116_RS15845 NONE
HR116_RS15850 3471191 .. 3471221 + -10.5  -3.29144   CACCCCAACTCCGTA      G-GGCGAATAACCG CTCG CGGTTATCCGCCGC       TTATCCGCGACATCG  66 188
HR116_RS15855 3472068 .. 3472088 + -19.7  -3.55444   GCTCCCTGGCGCGAC            GCCCCCGGC CTG GCCGGGGGC            TTTGCGGCATCGCCA 100 45
       cas1f 3475197 .. 3475211 +  -4.2  -2.62983   CGGAGCACGGTGTCC               GCATGA ACA TCCTGC               TGGTGTCGCAATGCG  41 20
       cas3f 3478426 .. 3478438 +  -3.3  -2.75844   GTTCAAGAAATACAA                CTGAG GAG CACAG                CTTTCGAATGCGAGC  40 22
        csy1 NONE
        csy2 NONE
        csy3 NONE
       cas6f 3482403 .. 3482427 + -12.9  -3.62096   TCGGCATGTCCGCAA          CGAAGTCCCAT GGA AAGGGACTTCG          TTTCGACTGGTGCCC  77 61
HR116_RS15890 3484791 .. 3484815 + -12.8  -3.21099   CTGGTTGCGCAAGTT          GCGGCCGCTC TAGGC GAGCGGCCAC          TTGCTCGTCGCAGGG  73 13
HR116_RS15895 3486187 .. 3486223 + -20.3  -4.25104   CACATATATGAAGAA    TGGCCGGAAGGGAGTAT GGA ACATTCCCTTCCGGCCA    TTTTCATCGCCCCCC 100 80
HR116_RS15910 3501345 .. 3501367 + -10.5  -3.96842   CGTCGCTGAGACACA           AGGGCAGGC ATTGC GCCTGCCCG           TTCTTCTGTTGGCGT  78 32
HR116_RS15925 3504091 .. 3504111 +    -9  -2.78384   CGGCAGTCCCGGGCG            CCGCGGAA TCGAC TTTCGCGG            TGTCCTCCGCGGGCA  55 88
HR116_RS15945 3508807 .. 3508820 +  -2.3  -2.88999   TGGGCATGCGGAGAA               GACTC CCAG GAGCC                TGTCGTCTCTCCCCC  40 78
HR116_RS15950 3509216 .. 3509226 +  -8.2  -3.28791   CCGCAGGGCGAATAG                 CGCC GCA GGCG                 TTATCCGCCGACACT  60 103
HR116_RS15985 NONE
HR116_RS15990 3519309 .. 3519348 +  -5.5  -3.14132   GATCTCGGCGCCCTC  GCGCACCGGCATCC-GCC CCTGC GGCAGGAAACCGACGCGC  TTGCTGGCAACGCCC  49 287
HR116_RS16025 3529646 .. 3529691 +  -4.6  -2.62616   CCGTCGTTCTGCCGC GCCACGGCGG-TGCCGGCGATC TCCA GGTCGCCGATATCCACCA-GGC TGCTCTCGCAGATCG  42 214
HR116_RS16045 NONE
HR116_RS16050 NONE
HR116_RS16055 3536057 .. 3536068 +  -4.4  -3.42078   CGCCTAACTCCACGA                TAGG AAAC CCTA                 TTATAGTGGCGTATG  51 484
HR116_RS16065 NONE
HR116_RS16070 NONE
HR116_RS16075 NONE
HR116_RS16080 3543141 .. 3543176 +  -6.2  -3.55071   AAGCTGCCAAGCCTT    TTTCTATATCTTGAGC AGAA GCCCAAGATATAGCAC     TTTGAGAAAGTCTAA  56 473
        gtdA NONE
HR116_RS16130 3553681 .. 3553695 +  -4.2  -3.15249   GCCCGCGCACGGCGC               GGGC CCACCCT GCCC               TTCATCCGGGCTGTC  47 47
HR116_RS16135 NONE
        maiA NONE
HR116_RS16145 3556669 .. 3556685 +  -9.4  -3.22475   GGGCAGCCGGCTGAT              CCTGCG CTACT CGCAGG              TCTTCTGAGCGTCGC  61 1
HR116_RS16170 NONE
HR116_RS16175 3563700 .. 3563710 +  -8.2  -3.30124   GGCATCGGCGGATAA                 CGCC GTT GGCG                 TTATCCGCCCTACCC  60 115
HR116_RS16200 3567720 .. 3567754 +  -8.5  -4.11216   GACTGATACCTCCAG    TGCCCGTGTGCCGCTC TCAG GAGCGGC-CAGCGGCG     TTTTCCCAATCCGCC  76 35
HR116_RS16210 3568878 .. 3568888 +  -2.4  -2.74144   TAGCCTGAACCTTCC                 GCGC CAC GAGC                 CTTTCCCCATGAGCC  39 33
HR116_RS16215 NONE
HR116_RS16220 3570186 .. 3570205 + -12.8  -3.40775   CGCGCCCACGAAAAA            GCCCGGCT CGAT GGCCGGGC             TCTTTCGCTGCGGGT  76 44
        mexE NONE
        mexF NONE
        oprN 3578519 .. 3578549 + -10.5  -5.24129   AAATCGGCCACTCCA      GCCCCGCGATTGCAG CTC CTG-G-TCGCGGGGC      TTTTTTATGCGCAGC 100 64
HR116_RS16260 NONE
HR116_RS16265 NONE
HR116_RS16270 3582547 .. 3582585 + -10.1  -3.10164   ACGCGCGACTGAGCG  GCGGACCTCCGCGCCCGC CATT GCAGGCGCGGGTGGC-GC   TTCAGTAATGGGTGG  62 29
HR116_RS16285 3585757 .. 3585771 +  -5.6   -4.4261   TCGCCGGCCATCAGC               CGCCAG CCG CTGTCG               TTTTCCTCTTCCGGC  72 213
HR116_RS16300 3588431 .. 3588448 + -12.7  -5.60993   TTGGACAAGTCCTGA             GGCGCCA GTCA TGGCGCC              TTTTTTTATCCGCCG 100 87
HR116_RS16320 3592331 .. 3592359 + -10.9  -2.94045   AGTGCGGCGGGCCCC        CGCCAAGGCCCTG CTG CAGGGCCTCGCTG        TAGTTGTTCGGCTGG  61 375
        antA NONE
        antB NONE
        antC 3596260 .. 3596277 +  -5.5  -2.62263   GGTCGCCGCCAGCTA             CCGGC AGGGTCAC GCCGG              TAATGTAGGACGCCT  46 54
HR116_RS16385 NONE
HR116_RS16390 3610055 .. 3610089 +   -10  -2.94099   TATTCACCTCCACAT    CCGCCG-CCGC-ACTC TAGCC GAGACGCGGACGGCGG    TGTGTCATGCAAGCG  61 305
HR116_RS16420 NONE
HR116_RS16425 NONE
HR116_RS16430 3623512 .. 3623535 + -13.8   -2.5805   GCTGCGTCTCTGCGA          CGCAGGGCGG ATGA CCGCGCTGCG           ATTATCCGCCCTGCT  71 42
HR116_RS16450 3628303 .. 3628321 +  -8.8  -3.01712   GCCAGGGCGATGCCG             CCGACGAA GCC TTCGACGG             TCTTCGACGGCGACA  55 521
        xthA 3641435 .. 3641445 +  -2.4  -3.53091   GCCGTCGCCCTCGGC                 GCCG AAG CGGA                 TTTCCGCGGGAACCT  48 225
HR116_RS16510 3642793 .. 3642806 +  -2.4  -3.25823   CGCTGTAACCTTAGC               GTCA CCCGTC TGAC                TTAATCTCGCCGGCA  45 33
HR116_RS16515 3644280 .. 3644290 +  -4.6  -5.04249   CCGTTTTGCCGGCGC                 CCGG AGC CTGG                 TTTATTTTTTCCGAG  83 65
HR116_RS16520 NONE
HR116_RS16525 3645586 .. 3645603 + -14.1  -3.63627   CCCCGGAATGAAAAA             GGCCCGC ATCC GCGGGCC              TTTCCCGTATACCAC  81 30
HR116_RS16535 3648200 .. 3648222 +    -4  -3.15249   CCATAGCCACCGAGG           GTCTGGATCG CCG CGGAGCAGAC           TTCCTCGGCCATCTC  45 266
HR116_RS16570 NONE
HR116_RS16575 3657536 .. 3657546 +  -2.4  -3.15663   TTGGTCGCCAGTTGC                 CGGG AGC CCAG                 TTGCTCCACGTCGCT  42 444
HR116_RS16585 3658628 .. 3658642 +  -4.2  -3.14463   GTCAGATCCTTCGAC               TGGCAC AAT GTGACA               TTCGTCACAGAGATT  47 405
HR116_RS16595 3660944 .. 3660977 +  -5.1  -4.22591   CGCCCTTGTTGCCGG     GGCCGCCATGGTTGT CGTG GCCACCCTGGTTGCC      TTTGTTGCCCTTGTT  69 484
HR116_RS16605 3663013 .. 3663031 +  -9.5  -2.75712   GCTGGCCCTTCCGCT             GTGGCGG AGAGC CCGCCGC             TCCTTCAGTAAATCG  57 70
HR116_RS16615 3665886 .. 3665896 +  -2.4  -3.33792   CTCCTCGGCCAGGTC                 CGCC TCT GGGG                 TCTTGTATGGGTGCT  44 462
HR116_RS16635 3668887 .. 3668939 + -11.9  -2.74144   TGCGGCCAGAGGCCC GCCACGCCCGACCAATTGTCGTGTC GCC GTCACGACAATTGGTCAGGCCACCC CTTTCCGCCTGGGCG  66 43
HR116_RS16640 NONE
HR116_RS16645 3669657 .. 3669670 +  -3.7  -2.66964   CGTCATTGCCGACAA               GGGCC TACA GGCCA                TCATCTGATGCCTGA  41 4
HR116_RS16650 3670795 .. 3670815 +  -3.1  -4.07568   ACCACGAATCGGTGC            GTGCCTGCG TTG CGGAGGTCC            TTTTGAGAACGCAAG  59 301
        radC 3678107 .. 3678120 +  -9.5   -5.1675   CCTGCTCTGACGAAA               GGGGC TTCG GCCCC                TTTTTTGCTGCGTGC 100 31
HR116_RS16700 3680493 .. 3680505 + -10.5  -2.52676   TGACCCCCACGCGGA                GGGGC TAG GCCCC                TCCATTCCCCCGCTG  59 38
HR116_RS16705 3682649 .. 3682676 + -24.2  -3.57144   TTCCTTCACTCAAAA        CCGGGCGCGGCA GGTC TGCCGCGCCCGG         TTTCAACGTCCACAG 100 79
HR116_RS16710 3683827 .. 3683840 +  -8.1  -4.11216   GCACGCTAGAGCTTG               CCACC AGGG GGTGG                TTTTCGGCCTGCGCG  76 174
HR116_RS16720 3688377 .. 3688404 + -15.5  -3.05463   GCCTGACGGCCAGCC        TGCGCCCCGCC CACTGC GGCGGGGCGCC         TTCCGTCGGCGGCCT  81 35
HR116_RS16730 3689488 .. 3689502 +  -3.4  -4.09685   TTGCGTCAGGGTGTC               CGGTGC TGC GCGCCA               TTTTCGGAGCTGCGC  58 155
HR116_RS16735 3690509 .. 3690556 +  -6.3  -3.16564   GCTATCTTGAGACTG CCTCCATCCGGC--CG-CGCTGGT GCT GCCGGCGTCCTTGCCCGATGGAGG TTCATCCGATGCGAC  53 95
HR116_RS16740 NONE
HR116_RS16745 3691822 .. 3691834 +  -2.6  -2.66912   AAAGTCAGTAACGGC                GCTG GTTTG CGGC                TCCTCTAACTTACCT  38 141
HR116_RS16750 NONE
HR116_RS16755 NONE
HR116_RS16760 NONE
HR116_RS16765 3694347 .. 3694399 + -11.3  -2.70932   AGCACGCAGCGGCCT TGCCGTCGTGCC-GCGTTCGGCGCG AGGGC CGCGCC-AATGCAGGCATGTCCGCG TGCTTCGCACGACAG  63 364
HR116_RS16790 NONE
HR116_RS16795 3704294 .. 3704328 +  -7.1   -3.6579   ACCCACGTTCCTCCC    TGGCCGCG-CGGCC TTGATGGC GGTCGTCGCTGCCA     TTGTTAACGTAGGTT  59 74
HR116_RS16800 3705688 .. 3705698 +  -2.4  -2.52464   GCGGATGGGAACAGG                 CCGC GGC GCAG                 TAGCTTCGACGGGCC  37 12
HR116_RS16805 3706427 .. 3706449 +  -3.3  -3.72576   CGCTCACGGGCCAAG           ACACCCTGA CCCAA TCAGGGGGA           TTTAATCGGGAAGCG  54 17
HR116_RS16815 NONE
HR116_RS16820 3708948 .. 3708974 + -14.5  -5.25906   TCTCTCCTGCTAACA        CGCCGCAACGCG CCCG CGC-TTGCGGCG         TTTTTATTGGTTTCT 100 66
HR116_RS16825 NONE
HR116_RS16830 NONE
        trbB NONE
HR116_RS16840 3712989 .. 3712999 +  -8.2  -2.62184   GTTCTTCAGCTTCTC                 CGGC GGG GCCG                 TCGTATGAGCACGGC  53 7
HR116_RS16845 NONE
HR116_RS16850 3715720 .. 3715740 +  -2.5  -2.53271   GCTTCCCAACCGCTG            GAGGTTTCA CCA TGAAAACCC            GTCTTCTCGCCGTCG  37 11
        trbJ NONE
HR116_RS16860 NONE
        trbL NONE
HR116_RS16870 NONE
        trbG NONE
HR116_RS16880 NONE
HR116_RS16885 3721385 .. 3721395 +  -2.4  -3.18264   GGCTATGGTCATTGC                 GGCG TGC CCCC                 TTGCTGGCTCAGAGG  43 51
HR116_RS16890 3722306 .. 3722320 +  -3.5  -3.63569   AGCAGGCCAAGCATC               CGATC GCGCG GGTCG               TTGTTCGCACCTTCA  54 211
HR116_RS16905 3726425 .. 3726435 +  -2.4  -3.76224   GGCGATGAGTTCCAC                 GCGC TGG GCGA                 TTTCATCACTGGCGC  54 162
HR116_RS16920 3730140 .. 3730159 + -12.1  -5.27335   GATCGCCGTAGAAAA            GCCCCGC CTCGTC GCGGGGC             TTTTTCTTTCCCCCG 100 49
HR116_RS16930 NONE
HR116_RS16935 3732340 .. 3732350 +  -8.2   -3.5393   ACTCCCTCGGTTCCG                 CCCG TGC CGGG                 TTTGAAACCGATGAT  62 142
HR116_RS16950 3735858 .. 3735884 + -16.6  -3.92324   ACAGGAAAGAAAAAA         GCCCCGTAACTC ACT GAGCTACGGGGC         TTTCCTGTTGGAGGC  95 382
HR116_RS16970 3742075 .. 3742093 +    -6  -3.63068   TTGCAAGCCCGTATC             TGCGGT CGCGGAA ACCGCA             TTTACGGTGGTCTGG  57 44
HR116_RS16975 3742380 .. 3742392 +  -6.2  -3.29043   GAGCGCGTCAACAAC                CGGG CCTGA CCCG                TTCTCCCGCGGACTT  52 17
HR116_RS16980 NONE
HR116_RS16985 NONE
HR116_RS16990 NONE
HR116_RS16995 NONE
HR116_RS17000 3747201 .. 3747231 + -11.8  -3.93262   CTCGCGACGCATGCA      CCCGCC-GCCCCC TGAACC GGGGACGGGCGGG       TTTCGGTTTGTTGAC  81 237
HR116_RS17005 NONE
HR116_RS17010 3748637 .. 3748658 +  -5.8  -4.56597   GCACTCCAGCACGCG           CCCGTCGCC GACCA GGTG-CGGG           TTTTTCAACCACCAC  76 50
HR116_RS17015 3749146 .. 3749174 +   -11  -2.78596   GGAAGTGACCCGGCA       TGGGGCGGC-GGC AGTC GTCGGTCGCCCCA        TGTCCTCGCGAGCTA  63 33
HR116_RS17020 3751640 .. 3751685 + -14.7  -3.21218   TTCCGCCTCTGCGAA GGGTCCCCCGATGGCTTGC-CA TGC TGCGCGAGCCACCCGGAGACCC TTCATGGTCAGCGGT  80 241
HR116_RS17030 3753949 .. 3753972 +  -4.4  -3.53012   CCGGCGCGACATCAT          CGCGCGCCTGG AAG CC-GGCGGTCG          TTTCGACAGCGCGAC  51 122
     tetR(G) 3758543 .. 3758573 +  -7.5  -3.35679   CATCGGAGCGGGCTT       GCTTCCAGTCGTC GGCTA GACGACTGGCGAC       TTCTCGGTGGCAGCA  58 217
      aac(3) 3763728 .. 3763746 +  -8.1  -3.53444   TCTGGCGGGTAGGAA            GCGGCCGC GCAA GCG-CCGC             TTTGGGCACAGATCG  63 513
HR116_RS17090 NONE
HR116_RS17095 3768607 .. 3768632 +  -5.3  -2.91681   GAGCCGCCTCGCTGC         CGCCGCTCTGA GATG TCGGACCTGCG          TCTGTGGCCTTGGCG  46 15
HR116_RS17100 3769778 .. 3769805 + -10.5  -4.13767   TCTTCATATAAGGTT        GCCCGGAAGCC ATTATC GGTTGCCGGGC         TTTTCGACTCGAAGG  81 219
        sul1 NONE
HR116_RS17115 3771270 .. 3771280 +  -6.8  -3.91144   CTAGGGGAGCGCGGT                 GCTG CGC CAGC                 TTTCTAGAATGTCGC  65 124
HR116_RS17130 3773550 .. 3773569 + -11.4  -5.45802   CGCACCCTCCTGACA            GCCCTGCA CTCG TGCGGGGC             TTTTTCTTTTCCCCG 100 52
HR116_RS17135 NONE
HR116_RS17140 3774537 .. 3774570 + -14.6  -4.44448   TTCGTTCACTCCCCA     CGAGGGGCACGCGCC CACGA GGC-CGTGCCCCTCA     TTTATTTCCCGTAGT 100 67
HR116_RS17145 3775485 .. 3775514 + -19.3  -2.67803   CATTGTTTCTCCATG       CCAGCCCGTCTCC CCCA GGAGCCGGGCTGG        TCCATTTCATAGGAG  87 67
HR116_RS17150 3775824 .. 3775839 + -10.4  -5.06414   AGCCTGACCCAACCA              GCCCCT TTCG AGGGGC               TTTTTCTTGCCCGCA 100 34
HR116_RS17155 NONE
HR116_RS17160 3777156 .. 3777183 + -11.3  -5.06414   GCGACTTGCCCCGCA        GGCCTTCCATC CGTTCA GGTGGAGGGCC         TTTTTCTTCAGGAGA 100 56
HR116_RS17165 3777583 .. 3777599 + -10.8  -4.77173   TCCCGTCCCCTCATG              GCCCCC TTCAT GGGGGC              TTTCTTTTCTCCGCA 100 50
HR116_RS17170 3779043 .. 3779053 +  -2.4  -3.39895   GACAAAGGGAAACGC                 CCGG ATG CCGA                 TTGATTGCTGCCGCG  47 520
HR116_RS17175 3780242 .. 3780265 + -13.8  -4.93696   AGTCGTTCTGATCCG          GCATGGCCCC TCAC GGGGCCTTGC           TTTTTCCTATTTCCC 100 30
HR116_RS17180 3781020 .. 3781057 +  -8.4  -4.84761   TGTTCTTCATCCGCC  CGCCGGGGTTCCTTCCCC ATGC GGGGGAGG--CTCCGGCA   TTTTTCTGGAGGTCT  90 62
HR116_RS17185 3781464 .. 3781483 +  -4.2  -4.07885   GGGTGTCTTCCCCAC            GGGGAGGCC TCC GGC-TCCAC            TTTTCAGGAGGCCTC  61 88
HR116_RS17190 3781920 .. 3781954 + -13.4  -2.74523   CTGAATCTCTTCCTT     CCACCCGCCAGGGCAG CAC TTGCCCACGCGGGCGG     TGCTGTTCCAGCTCA  72 37
HR116_RS17195 3782336 .. 3782370 +  -4.3   -4.2828   GCCTGACGTCACCTG    CGACGCAGC-CGAGG CATTCGC CCTGGCGCTGCG-CG    TTTTCATCCCTAACG  66 35
HR116_RS17200 3783096 .. 3783121 + -13.3  -2.77899   CGGTTTGACCCAACG         CGGAGGCATGC CTTG GCGTGCTTCCG          TCCTTCATCCCAACC  68 33
HR116_RS17205 3784268 .. 3784285 + -12.7  -3.73088   CATCCACTGACCCCG             CAGGCGG CTTG CCGCCTG              TTGTTCATCACCTGT  81 31
HR116_RS17210 3784676 .. 3784708 + -15.5  -4.25104   TTCTTTCCACCCACC      GGGGTTTCTCGCCCC GAC GGGGCGAGGTGCCTC      TTTTCCTGAAGGAGC 100 70
HR116_RS17215 3785085 .. 3785125 +   -17  -4.08557   TTTCCTTCCCACCCC TGGGGCATGTCACCGC-CCC TTG GGGAGTGGTG-CATGCCCCG TTCTTCTTTCGGAGC 100 80
HR116_RS17220 3787480 .. 3787518 + -15.2  -5.14563   TCCGTTGTTCCCACC   TTGCAGCCACGTCCACGG GAA CCGTGGGCGTAGCTGCTC   TTTTTTCATCCCAAG 100 76
HR116_RS17225 3788440 .. 3788455 + -11.8  -5.27335   CGATGCGTTTTCACT              GGCCCC TTCG GGGGCC               TTTTTCTTTGGAGGG 100 53
HR116_RS17230 NONE
HR116_RS17235 3789784 .. 3789797 +  -3.7  -3.05384   GGCCGGCGACCAGAC               CCGCC GCGT GGCGA                TTCCCTGACCGGAGC  45 4
HR116_RS17240 NONE
HR116_RS17245 NONE
HR116_RS17250 NONE
        traD NONE
HR116_RS17260 NONE
HR116_RS17265 NONE
HR116_RS17270 NONE
HR116_RS17275 3795668 .. 3795692 +  -4.2  -2.87132   TGCTCACCGAAGCCA         CCGGCATC-CT GTAA GGCGAGGCCGG          TATGTCCGAGCAGCA  44 12
HR116_RS17280 NONE
HR116_RS17285 NONE
HR116_RS17290 NONE
HR116_RS17295 NONE
HR116_RS17300 NONE
HR116_RS17305 NONE
HR116_RS17310 3803390 .. 3803407 +  -3.4  -3.87815   GCTTGCCCTCCCAGG             GTG-GCG CCCTC CGCTCAC             TTTCTGGAGGTCCGC  56 174
HR116_RS17315 3803944 .. 3803963 +   -15  -4.72272   GGCTTGCTAATCCAC            GCGGAGGC TTCG GCCTCCGC             TTTTTCATGGGCGCG 100 51
HR116_RS17320 NONE
HR116_RS17325 3805449 .. 3805461 +  -5.5  -4.19624   GGGGCCAGGTGTTCC                TCGGC AGC GTCGA                TTTCTATTGAGGATA  67 3
HR116_RS17330 NONE
HR116_RS17335 NONE
HR116_RS17340 3808855 .. 3808902 +    -4  -3.72324   GTTGGGATCGTAGCC GGGCGTGGCCCGCAGTTCCTCAA TGG TTG-GGTACTGCAGTTCAAACCC TTCTTCATCGGGATG  54 100
HR116_RS17360 3812870 .. 3812880 +  -2.4  -3.57971   CGGCGGCACGCCGGG                 ACGC TAT GCGG                 TTTCGCACTGACTCT  49 195
HR116_RS17365 NONE
HR116_RS17370 NONE
HR116_RS17375 NONE
HR116_RS17380 3815098 .. 3815113 +  -4.6  -4.59773   GCCTCAGTCGGCACG              CTGCTG AAAA CGGCGG               TTTTTAGAGGTGCCC  74 114
        arsD NONE
        arsA NONE
        arsB NONE
        arsC NONE
        arsH 3819539 .. 3819558 +  -3.4   -3.6053   AGACAAACTACAAGG            CAACGCGC CTGG GAGCGGTG             TTCATTTCTGGCAAA  51 83
HR116_RS17410 NONE
HR116_RS17415 3821212 .. 3821253 + -18.8  -2.78384   CCATTTATGCCTTGA TTTGTGCCTGCAGCACGC CTTTTC GCGTGCTGCAGGCACACC  TATCCTGCGGCAAGC  87 120
HR116_RS17425 3822551 .. 3822576 +  -4.8  -3.78242   CTTCACCCTGGTTGG         GTGGCTAC-TC AATGC GATGTAGCTAC         TTATATTGTGAATTT  58 4
HR116_RS17430 3823016 .. 3823042 +  -6.4  -2.59431   ACCATGAATCGCCAT         ACCACGCGGCAG GAT CTACCGCGTGCC         TAGCTTCTGGCCGAA  48 173
HR116_RS17440 3824189 .. 3824199 +  -2.4  -3.90112   CCGGTTTGCGTGATA                 GCAG CTC CCGC                 TTTGCTTGCGACGGG  54 189
HR116_RS17445 3825205 .. 3825221 +  -5.8  -4.15396   GCTGGCCTATTACCC              GCAGCT CACCC GGCTGC              TTCTTTCCTTTCAGG  67 342
HR116_RS17450 NONE
HR116_RS17455 NONE
HR116_RS17460 NONE
HR116_RS17465 NONE
HR116_RS17470 3828301 .. 3828333 +    -4  -4.38712   AACGTACTCGACCGG     CTCGGC-CTCGCCGT TAAG ACGGTGGGAGACGTG      TTTTCTCAGCCTGCG  66 40
        nhaA 3833676 .. 3833703 +  -4.8  -4.20025   GTTTGACTGCGTCTT        GCCGCCCC CTTTTTTGCGTA GGGGTGGC         TTTCTATTCCGGGTT  65 230
HR116_RS17500 NONE
HR116_RS17505 3836294 .. 3836307 +  -8.1  -2.60723   GTGAGTGTTTGACGG               GTCGC GGTT GCGAC                GTTCATTCCAACTGC  53 175
HR116_RS17510 3837663 .. 3837677 +  -5.8  -3.72241   GATCAGGCACAAAAA               TTTAAC CAC GTTAAA               TTTAACTCATTAGTA  60 365
HR116_RS17520 3838765 .. 3838781 +  -2.1  -3.60475   TTGCCCAGGCTGATC              GACAGCA GCT TGCCGGC              TTTCAGCTCGCGGTT  48 410
HR116_RS17555 3847171 .. 3847199 +  -2.4  -3.62096   GCGCAGGCCGAAGTA       GC-GCATCAACAG GTAC TTGGTGGTGCCGC        TTTCCCCTCCTCCAC  48 251
HR116_RS17575 NONE
HR116_RS17580 NONE
HR116_RS17615 3861878 .. 3861906 +    -3  -3.90112   CGCAGCCAGTGCCGA       GC-GAATCCGGGC CATG GCCTGGACCCCGC        TTTCGTTGAGGAAAA  58 83
HR116_RS17660 NONE
HR116_RS17665 3884366 .. 3884390 +  -4.8   -3.6682   AGCGAATGCCCGACT          CACCCGCGCC ACTTC GGTCCGGGCG          TTTCAGTCCGTCCAC  55 62
HR116_RS17715 NONE
HR116_RS17720 3896600 .. 3896616 + -15.1  -4.18018   CCCGAAAATGCAAAA              GCCCCGC TCA GCGGGGC              TTTTCAGTACGCGGA 100 126
HR116_RS17730 3897542 .. 3897560 + -11.7  -4.98531   AACGCCTCCGGAAAA             GCCCGTC CCCGC GACGGGC             TTTTTCATTTGCGGA 100 46
        tusD NONE
        tusC NONE
        dsrH NONE
HR116_RS17750 NONE
HR116_RS17755 3900017 .. 3900030 +  -2.5  -3.91897   CGATACGAATAGCCC               TTTAT TTAT ATAAA                TTTATCGATCACCCG  54 42
HR116_RS17760 3901458 .. 3901470 +  -6.2  -2.70932   GCGTAGGCCGCGCAG                CCGC TGGCC GCGG                TGATTCCCGGCACGA  47 421
        trxB 3909503 .. 3909518 +  -4.6  -3.53091   GCCCTCCCCTACCCC              GCCATG CTGA CCTGGC               TTTCCCGCACCGACT  53 60
HR116_RS17795 3910167 .. 3910178 +  -3.6  -3.34488   GCGACCAGCCTCCTA                CCGG CGAC CTGG                 ATTTTTAGGCGAGTT  46 6
HR116_RS17800 NONE
        infA 3911313 .. 3911332 + -16.4   -4.4078   GATTGCAAAAGAAAA            CGCCCGGC ATCT GCCGGGCG             TTTTCGTTGCCGCGC 100 67
        cspD 3914551 .. 3914568 + -12.7  -4.98255   TGCGGAAATGAAAAA             GGCCGGT GCGA ACCGGCC              TTTTTCTCGTTCGGG 100 53
HR116_RS17830 3918458 .. 3918485 + -17.8  -4.83169   CACGCTGACGAAGCA        GAAACCCCGGGC CTAC GCTCGGGGTTTC         TTTTTATCGAGGCCT 100 47
HR116_RS17835 NONE
        mnmA NONE
        hflD NONE
HR116_RS17850 3921685 .. 3921716 +  -4.5  -4.90013   GCTGAATGCCCCACC     GGGGCGCACCTTTCA TGTA TGATA--TGCGCCCC      TTTTTCGTTGACTTC  77 36
        purB 3923139 .. 3923157 + -17.4  -5.27335   CGCAACCCTTTTGCA             CGCCCGGC TGC GCCGGGCG             TTTTTGTTTCAAGGA 100 44
HR116_RS17860 NONE
HR116_RS17865 NONE
HR116_RS17870 NONE
HR116_RS17875 3926240 .. 3926273 +  -5.2  -4.10855   TTTCCAGCGCGAATT     GCCTCCCGCTCCG GCAAAGCCA CGGGGCGCG-GGC     TTTTGCGGGCATTTT  65 53
HR116_RS17880 3928455 .. 3928472 + -14.1  -4.98531   CCCGCCTCGCGAAAA             CCCCGGC TCCG GCCGGGG              TTTTTCATTTCCGGA 100 78
HR116_RS17885 NONE
HR116_RS17890 3931663 .. 3931676 +  -2.4   -4.1891   AAGCGCTGGAAAAAG               CAGA GAAGCG TCTG                TTTGTGTTAGAAAAA  59 456
HR116_RS17895 NONE
HR116_RS17900 NONE
        nuoC NONE
        nuoE NONE
        nuoF 3936649 .. 3936672 + -13.8  -2.68761   CGCCTGATGCTTTGC          AGCCGGACGG CCAG CCGTCCGGCG           ATGTTTCGTCGTCGT  72 34
        nuoG 3939471 .. 3939505 +  -4.9  -2.79302   CTCCGTGGAAGGTCT    GCAGGAGGCTGCACAA TGAG TTG-GCTGACTCCCGC     TCTGGTCACCATCAT  44 7
        nuoH NONE
        nuoI NONE
        nuoJ NONE
        nuoK NONE
        nuoL NONE
        nuoM NONE
        nuoN 3946796 .. 3946811 + -11.8  -5.27335   CCCGCTCCACGAAAA              CCCCGC CTCG GCGGGG               TTTTTCTTTGGCCCG 100 45
HR116_RS17960 3947710 .. 3947731 +   -13  -2.53015   GGTTGACAGCGGCGC           GCGCGGAC CTTAGA GTCCGCGC            TCCCTTCCCGCCTGT  67 35
HR116_RS17965 3949236 .. 3949282 +  -8.4  -3.71848   TGAAACGAACAAGCC CCGCATTCGCGGGGCGCGTCTG CCA CGGGCGCGACTCAGGCCTGCGG TTCTTCCTCGCGGCC  69 38
HR116_RS17985 3956430 .. 3956442 + -10.5  -3.21276   AACTGTTAAGCCCTG                GCGGC GCG GCCGC                TCTTCTGCAACGGCA  64 439
HR116_RS18015 3960772 .. 3960788 +  -4.3  -2.89602   CGCCCACTCCCTGGG              CGGGCAC ATC GTGTCCA              ATTTCATCTGGGACC  44 453
HR116_RS18025 NONE
        norR NONE
        queD 3966371 .. 3966383 +  -9.1  -2.85351   CGCCCGACTCTCCCC                TGGCG CTT CGCCA                TCTGCTCTAAAACGG  58 43
HR116_RS18055 3967010 .. 3967064 +  -9.4  -2.94322   AATCCTGGCTGCAAC GCTAAGCCGGTTTTCCCGACGGCATC CTGCC GATGCCGTCGG-AAACCCCAC-TGGC TACTTTCGCTCCCCT  58 21
HR116_RS18120 NONE
HR116_RS18125 3979524 .. 3979546 +  -4.1  -3.22448   ATAGCCAATGACCCG          CCGGCC-GGT TCCT ACTAGGCTGG           TTCGCTTCGCTTTCC  47 129
HR116_RS18130 3980922 .. 3980932 +  -5.4  -3.27774   AGGATCCCGACCCGC                 TTGC CGC GCAA                 TTCGTCCTTGCGCTG  51 103
HR116_RS18155 NONE
HR116_RS18160 NONE
        pfeA 3992881 .. 3992891 +  -3.2  -3.30124   CCTTCTATACCAGCC                 TGAC CGC GTCG                 TTCTGAGCCATAACG  46 9
        pfeE 3993995 .. 3994024 +    -5   -4.4648   ACTGCAACCCTCTGC       GGCGTTGGGA-AG AGGAG CTATCCCGAAGCC       TTTTGTCCTCGCGAT  71 189
HR116_RS18175 3995386 .. 3995405 +  -4.9  -2.57294   GCGCGGTCCGCCGCC            GGCGGGT AGATCC ACACGCC             ATTGATCTCGGTCTT  42 121
HR116_RS18185 3997382 .. 3997404 +  -2.5  -3.92373   AAACACCATTGTCGA           CTGCGGTGC TAATC GCGCCGGCG           TTTCTCCCTACCCTA  54 84
HR116_RS18190 3998286 .. 3998306 +    -9  -3.14132   GAACTCCACCAGCGT           C-GGACCGG CGAG CCGGTCCAG            TTCGTCGCGCGCCGG  59 317
HR116_RS18220 4004190 .. 4004213 +  -2.4  -4.12188   GTACCCGGGCGGGCC          CTTCGCGGC CCGCCTA GCC-CGGAG          TTTTCCCGATGATCC  59 42
HR116_RS18225 NONE
HR116_RS18230 4007160 .. 4007172 +  -4.7  -3.44051   CTGCCCCTGGCGGAT                CCGCC CAC GGCTG                TTATCCTGCTCGCCG  53 64
        tse2 NONE
HR116_RS18240 4008346 .. 4008360 +  -2.8  -3.14931   GCGCAGGCTGGCGGT               CTCG CTGAAGC CGAG               TTCCTCGGCGATCCG  44 384
        cysK NONE
HR116_RS18275 4015102 .. 4015133 + -13.6  -2.78384   GCCGGCGCCCCCTGA      GCGCCGGCGGCGAA CCAG TCCGTCGCCGACGC       TGTCGTCAGCCGACA  72 163
HR116_RS18280 4016262 .. 4016290 + -17.4  -4.07687   GCAAGTGAAGCCCGG        CGCCGGCCCGGT TTGTC GCCGGGCTGGCG        TTTTAGCGCAAGGCT 100 33
HR116_RS18285 4017704 .. 4017714 +  -8.2  -3.31792   TCGGCCGGAACTTGT                 GGCC ACA GGCC                 TTGTGCACATACTCC  58 192
HR116_RS18295 NONE
HR116_RS18300 4021141 .. 4021199 +  -3.9  -3.15544   GCCGGTAACGGCGGG TCTGCAGGAGTGCGCCGGCCTGCTGCGCG AGCAA CGCGCA-CA-G-CGGCG-ACACCCGTGGG TTGGTCGCCCTGCCC  45 84
HR116_RS18315 NONE
HR116_RS18320 4025018 .. 4025063 +  -6.7  -3.28791   ACCCTGCGAATCCTG CCAGTCGAGAGCGGCCAGGT TCTGCAT GCC-GGCCTCCCACGGCTGG TTGTCGAACAGCGCT  54 247
HR116_RS18330 NONE
HR116_RS18335 NONE
HR116_RS18340 NONE
HR116_RS18345 NONE
HR116_RS18350 4028651 .. 4028664 +  -9.5  -2.87211   GACAAGGCACCGTAG               GCGGC GGGT GCCGC                TCTCTCCGCCGGCAT  58 26
HR116_RS18355 NONE
HR116_RS18360 NONE
HR116_RS18365 NONE
HR116_RS18370 4039090 .. 4039117 +    -2  -5.06414   CCCTGGATTGTAGTG        GTCAACCCAT CCCGGACA GTGGGTTGAG         TTTTTCTTCGGCCAC  77 96
HR116_RS18455 4060127 .. 4060147 +  -2.3  -3.54741   CCTGGCCCTAGTCGG            CGCCGGCCC CGA GTGACCGCG            TTTCAGACCATGGTC  49 10
HR116_RS18460 4060601 .. 4060614 +  -8.1  -3.17075   AGCGCCGAACGGGCA               GGCCA GCCC TGGCC                TTCCCTTCCGACACG  58 223
HR116_RS18485 NONE
HR116_RS18490 4064340 .. 4064353 +  -5.9  -3.13522   CTGCAACAACAGCGC               GCCGT CATG GCGGC                TCTTGCTGGACAACT  51 455
HR116_RS18505 4065711 .. 4065723 +  -3.3  -3.53012   CCGCGCGCACCTGGC                GCAAG CCG CTGGC                TTTCAGGCAGGCGGC  49 200
HR116_RS18520 NONE
HR116_RS18525 4067416 .. 4067432 + -10.8  -4.07568   CGCAGGCAACAGAAA              GCCCGC GCTCG GCGGGC              TTTTCGGCAAGGCAA  82 49
HR116_RS18535 4068242 .. 4068269 +  -3.5  -5.75342   CGACGCTCCTTTGAA        GACCATC-GC CCTCCCCCC GCAGATGGTC        TTTTTTTTGCCCGCG  95 203
         eco 4069031 .. 4069047 +  -8.7  -4.98522   ATCCTTAAAAGCCGC              TCGGCTT CAA GAGCCGA              TTTTTATGTCAGGTT  93 174
HR116_RS18560 4072451 .. 4072487 +  -9.3  -3.20348   CCGTTTGCGGCCGTA    GAGCTCCGGACACTTCA TGC TAGGGGGGCCGGAGCTC    TTCCCTCTTCCTCGC  61 181
HR116_RS18570 4074482 .. 4074510 + -16.8  -5.22943   ACCTGCGAGCGCGAC        GAGAACCCCGGG CCAGT CCCGGGGTTTTC        TTTTTTGCGTTTCGT 100 45
HR116_RS18575 4075421 .. 4075437 +  -9.3    -3.551   GCCTCACCATAGGGC              CCCGCGC GGG GCGCCGG              TTGTCTGGGTTCGAC  68 456
HR116_RS18590 4076167 .. 4076177 +  -8.2  -3.61398   GCTGATCCCGGCACC                 GCGC CTA GCGC                 TTCTTCGGCACCACC  65 36
HR116_RS18600 4077756 .. 4077784 +  -4.5  -3.40299   CGTCTTCCAGTTCTT        CGTCGTCGGAC TTGCGGC GGCCGATGATG        TTGTCCATCTCCTCG  51 375
HR116_RS18615 NONE
HR116_RS18620 4080927 .. 4080953 + -10.2  -5.83822   AACCCCAAGGGTATT        TCCCGACCAGC TCCCCC GC-GGTCGGGA         TTTTTTTTGCCTGTC 100 132
HR116_RS18640 4084098 .. 4084125 +  -7.6  -3.28712   TCGTCGCTCATCTTC        GACTGCCTGCCG GCTG CGTGAGGCGGTC         TTATAAAGGCAGCGA  58 258
HR116_RS18650 4084727 .. 4084742 +  -3.9  -3.05816   TTTTCTCGAAGCTGC              CGCGG TTGACC TCGCG               TTCGCTGAACAATGG  44 225
HR116_RS18675 4088120 .. 4088137 + -12.7  -5.09225   TCCGCGTCGACAGAA             CGGCACC CCGG GGTGCCG              TTTTTTCCATCCGCT 100 41
HR116_RS18695 4091647 .. 4091673 + -13.6  -3.06183   GCGCGAGGCTGAGGC         CCCGGCGCGGCT AGA GGCCGTACCGGG         TTGCCTGGAGATGAG  70 367
HR116_RS18705 4092804 .. 4092831 +    -4  -3.41745   TTCCCAGCATGTTTC        CCCAGCGGTGCCC TCG GGGCGCCA-TGGC        TTCCTATTGTCCGAA  51 48
HR116_RS18710 4094665 .. 4094697 + -18.5  -4.07885   CAGAAGTAGGACGCT      TCCCCTCCGTGCC CCCGGCA GGCACGGGGGGGA      TTTTGCGGAGCGCTC 100 32
HR116_RS18715 NONE
HR116_RS18720 4095684 .. 4095698 +  -5.6  -3.14132   CCAAGCCCCCTTTCG               CCGCTA CAG TCGCGG               TTCATCCACCAGACA  51 95
HR116_RS18725 NONE
HR116_RS18730 4097666 .. 4097679 +  -5.9  -3.38812   TGCGGTCGATGTCCT               GGGCC ACCT GGCTC                TGTTCTTCGGCGGCG  55 190
HR116_RS18740 4100655 .. 4100683 + -14.6  -3.53444   ATGGTGGTCACCAAA        GCCCCGGAGG CCGCTCATC CCTCCGGGGC        TTTCCCCCCGCCTGC  83 239
HR116_RS18745 4101833 .. 4101848 +  -2.4  -3.33696   CTTCAGTCAGAGCGG              CTCAGG GCTT CCGGGG               TTCGTTGCCGAGCAG  45 497
HR116_RS18770 NONE
HR116_RS18775 4106583 .. 4106616 +  -5.2  -2.74144   CTCACCGGGAACGCT     CCTTTGGGCTGGAA CCCGCC TCCCTGCCAAAAGG      CTTTCAAGATCCGGG  44 200
        dusA NONE
         tal 4109160 .. 4109194 +  -8.4  -3.04792   TGAGGCCCATCAGGA     TGCGGTGCGCCTCCAG AAC CTTGTCGCGCACCACA     TCTTCCGACTGGTCC  55 184
HR116_RS18800 4111309 .. 4111326 +  -8.3  -3.59262   ACTGAAACGACGAAA             GGCGACC CAAG GGCCGCC              TTTCCAGGTGTCGCA  65 36
HR116_RS18810 4112985 .. 4113028 +  -7.4  -3.08679   CTGCACGCCGCTCGG CGTGCAGCGTCTCGGTACG GGGCTGG CGTCCCTGGGCGCTG-ACG TATTCCATGAAGCCG  54 443
HR116_RS18820 NONE
HR116_RS18825 4114747 .. 4114763 +  -4.3  -2.71712   CCGACAGGTTAATCT              GTTCGGC ATG GACGGAC              CTTTCGGCGCCCGCC  42 29
HR116_RS18830 4115101 .. 4115119 + -17.4   -4.8048   TTGCCGAAATGAAAA             GCCCCGGC ATG GCCGGGGC             TTTTTCGTATCCGCG 100 46
HR116_RS18850 NONE
HR116_RS18855 4119205 .. 4119229 + -17.2  -2.78547   CGCGCCCGTGAAACG          CGAAGCCCCC ATGAC GGGGGCTTCG          TGCTTCATACCGTCG  84 30
HR116_RS18880 4125070 .. 4125099 + -22.3  -3.01712   AGCGACAGTCGCAAC       CGACAAAGGCGCC TTCC GGCGCCTTTGTCG        TCTTCACCCACCCAA 100 54
HR116_RS18885 NONE
HR116_RS18890 4126221 .. 4126236 +  -4.7  -2.80816   CACGTCCCCACTGAT              TGCTC TGCAGC GAGCA               TGTCGTACCTCGCCG  44 227
HR116_RS18895 4127022 .. 4127072 +  -3.8  -3.37796   TAACAGCCTCGCCCA CCGCCCGCCTCACAGACTGCTCG CCGACA CGAGCAACCAGGGAGGTAG-CGG TTATGGATCGTCCGA  48 38
HR116_RS18900 NONE
HR116_RS18905 NONE
HR116_RS18910 4128682 .. 4128692 +  -4.6  -2.61695   CCCTGGCACAGGAGA                 GCCG TCA TGGC                 CTATTTCAAGCTGGA  43 70
HR116_RS18915 NONE
HR116_RS18920 NONE
HR116_RS18925 4131316 .. 4131328 + -10.5  -2.87132   CTCGCCACGACACCC                CGCGC ACC GCGCG                TCTATCGCAGAGGAG  61 44
HR116_RS18930 4131906 .. 4131936 + -16.8  -4.07568   GCATGAGACCGCACC       GACAAGCGCCCCGC CTC GCGGGGCGCTTGCA       TTTTCGCCGCCCGCC 100 35
HR116_RS18935 NONE
HR116_RS18940 4132776 .. 4132794 + -14.6   -4.8048   CGCTCCACCAGAGAA             GGCCACTC CAC GAGTGGCC             TTTTTCGTCTCGACG 100 51
HR116_RS18960 4134268 .. 4134287 +   -10  -2.62184   GTCTACGACTGATTC            CGGCCTGCC TAC GGCAG-CCG            TGCTATAACCCAGGC  59 29
HR116_RS18965 4135279 .. 4135301 +  -8.5  -2.75481   AGGCGACCTTGCCCT          GGAAC-GGTC CCAG GACCAGTTCC           TCGTTGCGGTTCAGA  52 316
HR116_RS18980 4139282 .. 4139302 +  -3.9  -4.08945   CAGCAGCGATTCTTC            GACGCCA TCCGGCC TGGCGAC            TTTTCCCCGGGTGCT  61 497
HR116_RS19000 NONE
HR116_RS19005 4142271 .. 4142314 +  -7.3  -2.52896   CCCCGCATGATTATC AGGAGC-CCGTTCGCCCGCC CCGGC GGCCTGCGAACCGCGCTCCG TGCCTTCAGCCGTGA  50 84
        htpX 4143243 .. 4143261 +   -16  -5.60993   TTCACACTTGGGACA             GGGCGACC ATC GGTCGCCC             TTTTTTTATGCCCGG 100 47
HR116_RS19015 4144497 .. 4144518 + -18.7  -3.60234   TCCGCTGAAAATGGA           CGGGGCGCC GCGC GGCGCCCCG            TTTCAGCCTCTCTCC 100 33
HR116_RS19030 4146766 .. 4146795 +  -4.4  -3.74224   CTGCTTGGCTCCAAC       TGAAACAGATGCA CAAAA TGCA-CTGATTCA       TTTCGATCATTTCAA  56 23
HR116_RS19035 NONE
HR116_RS19040 NONE
HR116_RS19045 NONE
HR116_RS19050 4152014 .. 4152034 +  -5.3  -2.78463   CGCGCGAGACCGCGA            CCTAACGCC TGG GTCGATAGG            TATCCTCAAAAACAT  44 21
HR116_RS19055 4153208 .. 4153225 + -14.1  -4.71426   CAAGCCCATGAAAAA             GCCCCGC CGAA GCGGGGC              TTTTGTTCATCGCGC 100 354
HR116_RS19065 4156134 .. 4156164 +  -5.3  -3.22223   AATAGCCGAGTTGCG      GCTCCAGC-GCCGCG GCA CGCGTCCGCAGG-GC      TTCCTGGTCGAGTTC  51 107
HR116_RS19075 4158361 .. 4158384 + -19.6  -3.05384   TGAGCGCGCCGCGGC          CGCTCCCGCC GCCC GGCGGGAGCG           TTCGCTAGAGCAGCA  93 38
HR116_RS19090 NONE
HR116_RS19100 NONE
HR116_RS19105 NONE
HR116_RS19110 4163843 .. 4163860 + -14.1  -4.91109   AGCGGAAACGAAAAA             GCCCGGC GAAT GCCGGGC              TTTTTCTCGTCGCGC 100 73
HR116_RS19125 4165879 .. 4165905 + -18.8  -4.98531   GCCAGATCGCAAGAA         GGCCCGGCTAAT CAA GTTAGCCGGGCC         TTTTTCATTTCCGCA 100 37
HR116_RS19130 4166559 .. 4166576 + -10.5  -5.64274   ACGACCTGTTGAAAA             CCGGTCC CTCG GGGCCGG              TTTTTTTATGCCTGC 100 49
HR116_RS19150 NONE
HR116_RS19155 NONE
        greB 4172808 .. 4172838 +  -5.2  -3.64703   GCTTTAGCGGTATTT       CGGCTGCTGCCGGG CGC CCCGCAAGTTGCTG       TTTAAATCGGCGCAC  57 433
        thpR 4173473 .. 4173485 +  -5.5  -3.28712   ACCCGCCTCTTCCGC                TCTGC CAC GCAGG                TTATGACCGGCCGCC  52 43
HR116_RS19175 4174593 .. 4174614 + -18.7  -2.71712   AGCCTGTAGGACCCC           GGCCGGGGC CTCG GCCCCGGCC            CTTTCCCGGAAGCCC  87 32
HR116_RS19180 4175780 .. 4175805 + -16.1  -4.72272   CGCCGCAACGAAAAA         GGGCGGCCACC CGAA GGTGTCCGCCC          TTTTTCGTCGCCAGC 100 147
HR116_RS19195 4178936 .. 4178948 +  -5.5  -3.17723   CAGCTTTCAAGATAA                TGGCG CCT TGCCA                TTAGCTTGCCGATAA  51 122
HR116_RS19200 4180461 .. 4180489 +  -7.4  -2.71144   TCTGATCCGCAGGCG        CACCTGCCTATC GCCCG GATAGGCAGGAA        TCATTCGCCGCGCTG  52 36
HR116_RS19205 NONE
HR116_RS19210 NONE
HR116_RS19215 4183409 .. 4183427 +  -2.3  -3.61398   GCGGAAACGCATCCA            GCCGC-CC ATCT GGCGCGAC             TTGTTCGAAGAGAAC  48 337
HR116_RS19255 4191473 .. 4191513 +   -11  -2.77899   GCAGCAACAGGTAGT TGGGC-GCCGACCAGCAGC GCCC GCCGCTGGACGGCAGGCCG  TCGTTGATCGCCGCG  60 269
HR116_RS19265 4192714 .. 4192769 + -11.8  -3.44622   GGCTAGGCCGGCGTT CAGGCCGTCAGCC-GCTCGCGCAGGC GGCCGA GCATGC-CGAGCAGGCTGCCGACCCG TTCCTTCTCGCGCTC  74 35
HR116_RS19280 4195420 .. 4195438 +  -6.7  -4.72272   GCTCGCGGGGCGGAG             TCATGCG GGCCG CGCGTGA             TTTTTCCTGCGCAAC  81 114
HR116_RS19285 4196311 .. 4196335 + -14.3  -2.77899   CTGAGCTACCCGTTC          CGCCTGATCTC CGA GTGATCAGGCG          TCCTTGATCACCAGC  75 8
HR116_RS19295 NONE
HR116_RS19300 NONE
HR116_RS19305 4201553 .. 4201568 +  -2.5  -3.35679   GCTGAAGGGCAACAG              CTTCG GGGTCG CGAGG               TTCTGACTGAAACAG  45 4
HR116_RS19310 NONE
HR116_RS19315 NONE
HR116_RS19320 NONE
HR116_RS19325 NONE
HR116_RS19330 4209051 .. 4209075 +  -5.5  -4.67048   TGGCAGGGGCGCGCT          GCTCCTGCGGC GGT GCTTCCGGGGC          TTTCTTTTCCGGTGC  76 515
HR116_RS19400 NONE
HR116_RS19405 4223219 .. 4223233 +  -4.2  -2.50016   CCAGGCCTGCGAGGA               GCGC CGATGAA GCGC               CTGTTGCTGCTCGGC  41 16
HR116_RS19410 4224277 .. 4224289 +  -2.6  -3.07113   AGAACGAATGCTGGC                CGGG CTTTT CCTG                TTCCGTCGCATGATC  41 349
HR116_RS19420 NONE
HR116_RS19425 NONE
HR116_RS19430 NONE
HR116_RS19435 4230379 .. 4230401 +  -8.3  -2.90615   GCAGACGTGCACGTT           GTGCCGGCG CTGCT CGCCGACGC           TGGTTTCGCAGCGGT  54 212
HR116_RS19455 NONE
HR116_RS19460 4234385 .. 4234434 +  -6.2  -3.37493   CGGCGAAACCGCGAC CCTGCTCGCCGGCCCGCGCGGCC TCGAT GGCGGCGTTGAG-GGCAAGCAGG TTGGTCTGTTCGGCG  55 456
HR116_RS19475 4237937 .. 4237954 +  -9.1  -4.07568   GGCTGGCCGAGCGCT             TCCTGGC CTGA GCCAGGG              TTTTCAACGGGCGCG  76 15
HR116_RS19480 4238784 .. 4238807 +  -3.7  -4.13767   TTCGACCTCTACGGC          GCGCCCTGA ACGGCG TCCGGCCGC           TTTTCACCTCGACCG  63 17
HR116_RS19485 NONE
HR116_RS19490 NONE
HR116_RS19495 4241092 .. 4241102 +  -3.2  -3.36327   CCAGCTCCGGATCGC                 CTTC GTC GAGG                 TTGTCGATCACCTCG  48 82
HR116_RS19505 4242868 .. 4242882 +  -2.1  -3.31144   CCTTCCTCTCCACGG              CC-GCT GAGA AGCAGG               TTGTGGGCATCCAGG  45 205
HR116_RS19520 4246441 .. 4246458 +  -3.3  -3.65902   TGCCGAAGGCGGCGT             ACAGGCT GGGC GGCCTGA              TTTCCATCGCCTCGG  53 485
HR116_RS19530 4247836 .. 4247875 +  -8.4  -3.07787   CCTTCCCTCCCATGC  ATCGTTCCCGGGCGCGGC CACG GCTGCGCTCGCGGAGGAG   TCTTGCCGTGCTATT  57 44
HR116_RS19535 NONE
HR116_RS19540 4250459 .. 4250471 +  -3.3  -3.61715   ACCAACTTACAATGA                TCCCG ACC CGGAA                TTATTCCGCCAAGTA  51 442
HR116_RS19545 4251214 .. 4251272 + -10.9  -2.85668   GGAGCGCATGCTCGG CCGTCGCCAGCGCCGCTGAGCGGGGCC CTTCGTC GGCTCT-CGCGGCGGCTC-GGCGACGA TCTGCTATAGAGGTA  64 7
HR116_RS19550 4251652 .. 4251672 +   -14  -2.77899   AGCGCACAACGAAAA            CGGCCCTC GCAAG GAGGGCCG            TCGTTCATCGCGGCG  72 41
HR116_RS19560 4255303 .. 4255324 + -10.1  -5.14563   CAGGTTCCCCATCCA           GGCCCGG CTCATCCA CCGGGCC            TTTTTTCATCGGCGC 100 71
HR116_RS19580 4259959 .. 4259980 + -12.3  -3.25073   GGCGCTGAAAGCGGT           G-GGAGCGGC CAT GCCGCTCCGC           TATTCCTCTTCGACG  70 33
HR116_RS19595 NONE
HR116_RS19600 NONE
HR116_RS19605 NONE
        cobM 4267706 .. 4267730 +  -4.1  -5.14563   CGACAGCGGGCCGGC          ACGGCTAGCGT TCA GCGCTGGCCCC          TTTTTTCCTGAAGCC  84 103
HR116_RS19615 4269178 .. 4269203 +  -8.9  -3.30124   TGAGCACCGAGACGC         GCGCGTCGCCGC CCA GCGG-GGCGAGC         TTGTCGCGGATACCG  58 499
HR116_RS19635 4273826 .. 4273841 + -10.4   -5.1861   AAGGCAAACGAAAAA              GGCTCC CTCG GGAGCC               TTTTTTCATGCTGCG 100 39
HR116_RS19660 4278201 .. 4278226 +  -6.1  -5.96219   TCCTAATGGTCTTGA         CCCGGATTC ATCCCCCA GAACCCGGG          TTTTTTTTATCCGTG 100 203
         maf 4289008 .. 4289031 + -18.2  -4.03234   GGCATTCCATATAAA          GAAGCCCGGC TTCG GCCGGGCTTC           TTTATATAAGGAAGG 100 44
         rne 4295438 .. 4295457 + -13.6  -5.40072   GACAGGCTGAAAAAA            GGGGATGC CATG GCATCCCC             TTTTTTTGCGCGCCA 100 43
HR116_RS19795 4303227 .. 4303243 +  -8.7  -4.98522   ATCCTTAAAAGCCGC              TCGGCTT CAA GAGCCGA              TTTTTATGTCAGGTT  93 175
HR116_RS19820 NONE
HR116_RS19825 4308773 .. 4308787 +  -4.2  -2.69468   CAACCCTCGAACAAG               GAGCCA CAG TGACTC               TCATCTATGGACATC  42 14
HR116_RS19830 4309513 .. 4309541 + -18.9  -2.70932   CGCTGAGCACATCCC        CTCCGGCCGGC TCAGGCC GCCGGCCGGAG        TCCTTCAAAAAAGCC  87 35
         mfd NONE
HR116_RS19895 4325677 .. 4325692 + -11.8  -5.63103   CGCAATAGCGAAAAA              GGCCGC AATA GCGGCC               TTTTTTTCGTTGCGA 100 33
        lexA NONE
HR116_RS19920 4329920 .. 4329932 +  -4.7  -3.95219   CGACGCAGCACGATG                CGCCC GTC GGGCA                TTTCTACGATTTCAA  61 237
HR116_RS19955 4338723 .. 4338753 +  -9.6  -2.53271   ATCGTCCGCGCACGG       CTCGCGCCACTGGT TCA GCCACTGGCCCGGG       GTATTCTGCCAATAG  54 201
HR116_RS19965 4339652 .. 4339683 + -19.4  -3.73224   AGCCTGATCTCTCCC      CGCTCGGCCGGGGC CTGC GCCTCAGCCGAGCG       TTTCCTCGGCGCTCA 100 34
HR116_RS19980 4344596 .. 4344613 + -14.1   -3.6215   TCTGACCCCCAACCC             GGCCCGG ACGC CCGGGCC              TTTCCAGTACCTTGA  81 36
HR116_RS19985 4345039 .. 4345067 + -19.5  -3.18264   TCTGATCGCCGGCAA        TGGCCGCCCGCCG CAA CGGCGGGCGACCG        TTCCTCAGTCGAGGA  95 36
HR116_RS20015 4353275 .. 4353333 +  -8.7  -4.37658   GTCGAAGCCGGATTG CCCGGCAGGCCGATCACCGGGATGCCCTG GAA CTGGCCGAC--GGTCAGCGGCTTGCCGGG TTTTATCGCCAGCTT  79 367
        mobA NONE
HR116_RS20035 4355759 .. 4355789 + -17.7  -4.19735   ACAGGTTTTCCTGAA      GACCCCGTCGACTC GAAC GAG-CGACGGGGTC       TTTGCTTTTCCGCCC 100 53
HR116_RS20040 4355975 .. 4355991 + -10.8   -5.4833   CCATATCCCGAAAAA              CCCGCC TCAAC GGCGGG              TTTTTTATTGCCTGC 100 38
HR116_RS20060 NONE
HR116_RS20065 NONE
HR116_RS20070 4361219 .. 4361234 +  -5.4  -3.16742   GGAATAGCGGGAAAG              CCC-GTC CTA GACAGGG              TTCGTGCCAATTCGC  48 34
HR116_RS20075 4362712 .. 4362733 + -15.9  -3.72893   CCGCGGCGGAACGAA           GAGGCCACC CTTG GGTGGCCTC            TTTCATGGCGGGATG  90 93
HR116_RS20085 NONE
HR116_RS20090 NONE
HR116_RS20095 4365559 .. 4365591 + -15.6  -2.71712   AGAAAGGCCGTTGAA     GGATG-CGCCGACCG GCAA CGGTCGGCGCCCTCC      GTTTCCCCAACGCGA  78 27
HR116_RS20100 4367062 .. 4367083 +  -2.2  -3.53091   AGTTCCTCCTGCAAC           GCCTCCAGG GCCAG CC-GGAGTC           TTTCGCCAGGCGCCT  48 82
        dacB 4372408 .. 4372435 + -19.8  -4.19817   GCAGTACGAAAAAAA        GGCCGCCAGCGG TTGC CCGCCGGCGGCC         TTTTGCATGAATGCC 100 44
         rmf 4375375 .. 4375392 + -12.7  -4.27316   CGGGCGCAAGCCCAA             GGGCTCC GCAA GGAGCCC              TTTTCAATTCCGCCG  95 92
HR116_RS20145 NONE
HR116_RS20150 4378876 .. 4378886 +  -4.6  -3.65902   GTCAACACCGATGCC                 TGCC GCC GGCG                 TTTCACTGCACTGGC  55 92
HR116_RS20155 4380941 .. 4380951 +  -8.2  -3.12847   CCTACCGCTGGGCTT                 CGGG AGC CCCG                 TTGCCTCTCCCGCTT  58 85
HR116_RS20170 4382557 .. 4382576 +   -15  -3.07935   ATCCAGAATGAAGAA            CGCGCAGC CTGG GCTGCGCG             TTCGATGGATGCCGT  78 193
HR116_RS20240 4396377 .. 4396410 +  -4.7  -2.52946   TTGCTCCATGACCAC     TTGAATGACGCAGC CACCCCT GTTGCGTCA-TCGA     CATTTTGTGAAGGAG  43 251
HR116_RS20245 4396963 .. 4396977 +  -5.6  -3.14344   AGCCAAGCAGGCGTA               GTGGTC TCC GGCCGC               TTGATCCCAAGCGTC  51 25
HR116_RS20275 NONE
HR116_RS20280 NONE
HR116_RS20285 4405588 .. 4405610 +  -4.9  -3.33737   CGCTCATGAGTCTCT          TGCG-AGC-CG CCG CGTGCTGCGCA          TTCTCAGAATTCGTA  50 32
HR116_RS20290 NONE
HR116_RS20295 NONE
HR116_RS20300 NONE
HR116_RS20305 NONE
HR116_RS20310 NONE
HR116_RS20315 4410455 .. 4410476 +  -8.6  -2.78596   TCCCATGACACACCG           CCGCCGCG TACAGT CGCGGCGA            TCTGCTGCCCCAGTC  52 150
HR116_RS20365 4418753 .. 4418764 +  -7.2  -3.61398   GTAAGCGGCTGTCAG                GCCG CCTT CGGC                 TTGTTGCGCGACCAG  62 342
HR116_RS20390 4426008 .. 4426022 +  -4.9  -3.90112   AGATCAGCCCATGCT               CGGCG AACGA TGCCG               TTTCGTTGCCCGCAA  60 109
HR116_RS20455 NONE
HR116_RS20460 NONE
HR116_RS20465 NONE
HR116_RS20470 NONE
HR116_RS20475 NONE
HR116_RS20480 4455173 .. 4455186 +  -5.9  -2.90723   GCCACCGCTCTATCC               GCGCT GAAC GGCGC                TATGGTTAGGACTGG  48 19
HR116_RS20485 NONE
HR116_RS20490 NONE
HR116_RS20495 4458377 .. 4458394 + -14.1  -3.02144   CTCCGCACAAAAAAA             CCGCGGC CTGG GCCGCGG              TCTTGGCGGGGCTCG  75 56
HR116_RS20550 4473941 .. 4473973 +  -6.1  -2.79183   GCCCACCACGGGATG      CCGCCCGGCCTCG CCGAGCA CCAGGCCGGCCAG      TGTCGTACCGGTACC  47 371
HR116_RS20570 NONE
HR116_RS20575 4480947 .. 4480961 + -12.8    -4.258   ACGGAAACGAAAAAA               GCGGCC ATT GGCCGC               TTTCTTCGTGGCTCA  95 257
HR116_RS20640 NONE
        gspD 4491914 .. 4491939 + -14.7  -4.13014   CTCATACGAAAAAAA         GGCGCTGCTCC TTTC GGAACAGCGCC          TTTTCCGCATCTCCC 100 64
HR116_RS20730 4511346 .. 4511360 +  -5.6  -3.04144   CAGGTCGGACGCCAC               GGGTAG GCC CTCCCC               TCTTCGCCGTCCGCG  49 48
HR116_RS20745 4514229 .. 4514244 + -11.8  -5.08824   AACGAAATGAAAAAA              GGCGCC CGAA GGCGCC               TTTTTTCGATCACCG 100 31
HR116_RS20755 NONE
HR116_RS20760 4516493 .. 4516509 +  -2.9  -2.72829   CCTGCAACAGCCGGT              CGATGGT TTC GCAATCG              CTTTCCCGGCGTATC  40 78
HR116_RS20820 NONE
HR116_RS20825 4526207 .. 4526245 + -10.4  -3.40403   TTTTCCTCCAGTTGG  CGGA-TGCGCTTGCTGA TCTCGC TCGGCGAGCGCAGTTCG   TTCTCGTAGCGCCCG  65 138
HR116_RS20835 4529502 .. 4529533 +  -7.4   -4.7497   TCCTGTAGGGAAAAT      GGGGAAGTCA TCGGGAGAGGCT TGACTTCCCC       TTTTTAATCAGTAAC  86 33
HR116_RS20840 4529647 .. 4529668 + -15.1  -4.93365   GGAGCCAAATTCAAA           GCCCTCGGC ACAT GCCGGGGGC            TTTTTCGTTATCGGG 100 34
HR116_RS20955 4559970 .. 4559986 +  -2.2   -3.1855   GATTCCGCCGCGGCG              GCCCTT CCCCC AAAGGC              TTCACTCTTCAACGG  43 136
HR116_RS20960 NONE
        mupP 4561409 .. 4561430 + -11.5  -2.52795   GCCGCCGACAGACAA           CGACCCGCC GCCA GGCGGGTCA            TGCATTCAAAGGATT  62 49
HR116_RS20970 4562196 .. 4562225 + -19.3  -2.93878   CGCCCAGTGATTCCC       CGGCAGCCTCGCC GCCC GGCGAGGCTGCCC        TGTCCTTCCCTCTTC  91 31
HR116_RS20975 NONE
HR116_RS20980 NONE
        gltS 4565283 .. 4565309 + -15.9  -3.53012   TTCAGTTGAACCATG        GC-GGCGCTCCG CTAG CGGAGCGCCAGC         TTTCCGACGAGCGCC  85 32
HR116_RS20990 4566591 .. 4566608 +  -6.9  -3.92625   AGCGGATGCGTTTCT             CCAGCAG CCAG CCGCTGG              TTTCCTTGCCGTCTC  66 188
HR116_RS21005 4569206 .. 4569236 +  -4.5  -4.07568   CAACTCGTCGGTGCA       ACCCGGGGTGACC ACGAA GCTCGCCCCGGCC       TTTTCCGCAGCGGCG  62 484
HR116_RS21025 4572903 .. 4572913 +  -2.4   -3.8211   GCCAGATCACGCTGC                 CGGC GCT GACG                 TTCTTGTCGATCCGC  54 195
         gap 4586538 .. 4586566 + -12.4  -2.52464   GCGTTCCCCCTTTTT       CG-GCGCGGACCG CAAC CGGTCCTCGCCCG        TCACTTCACGACAGG  65 230
HR116_RS21120 NONE
HR116_RS21125 4591932 .. 4591978 +  -5.7  -4.07568   AGTCCTGCCCTGAGG CAGTCGCCGGGTACCGGCGGCCG GCC CGGTCGCCC-T-CCCGGCAAACG TTTTCGCACCGGACG  65 28
HR116_RS21130 NONE
HR116_RS21135 4593149 .. 4593159 +  -2.4  -2.83403   CGGCTACTACTACAG                 CCAC TGA GCGG                 GTTTCGTCAGCCCGC  40 19
HR116_RS21140 4593736 .. 4593760 + -17.9  -3.01712   CTGACGTCCGAGCCA          CCGCTACCGGG TCC TCCGGTAGCGG          TCTTCCGACCAGCCG  90 37
HR116_RS21145 4595212 .. 4595228 +  -2.1  -2.73203   TTCCCCAGGAGCATC              CGGCATG ACT CTTCCCG              CTTCGTTGTTCCTCG  39 61
HR116_RS21150 4595893 .. 4595909 +  -3.5  -3.15544   AGGCCGTGGGCGGCG              CAGCCGG CAG CCAGCAG              TTGCTCAGCGTGCGG  45 223
HR116_RS21165 NONE
HR116_RS21170 NONE
HR116_RS21175 NONE
HR116_RS21180 NONE
HR116_RS21185 4601896 .. 4601921 + -17.5  -3.24329   GGCCTGGCGACTAGC         CCGGGCGCTCC TGGC GGCGCGCCCGG          TATTCGTTGGGCGTG  89 53
HR116_RS21195 4603409 .. 4603433 +  -4.1  -3.75665   TCGCTCCCCCGGGAC          GACCGTCGGTC CCG GATCGGCGCGC          TTTCCTGAACTATCG  56 70
HR116_RS21200 4605374 .. 4605398 +    -2  -3.33744   TGCTCCAGCGCCGCC         CGCT-GCGGGC CGTC GCCCACCAGCC          ATTTTTCGCCCGGCA  44 427
HR116_RS21215 NONE
HR116_RS21220 NONE
HR116_RS21225 4609220 .. 4609234 +  -3.4  -3.86822   CCGCATCCGCTCACG               GGCTCG CGC CAGGCC               TTTCTCACGGAATTC  56 199
HR116_RS21240 NONE
HR116_RS21245 NONE
HR116_RS21250 4612757 .. 4612780 +  -5.9  -3.14132   TCCTGTCCGCCAAAC          GCCTCTGAG TCCAGC CGCAGGGGC           TTGATCCGGCGGGCC  51 18
HR116_RS21255 4614714 .. 4614729 +  -3.9  -4.08216   GGTGACCTTGTCAAA              GGCTC TGCAAC GGGCC               TTTTCGCGGCAATCA  61 80
HR116_RS21260 4615210 .. 4615222 +  -4.7  -2.90075   CAGCAACGGCTGAGC                GGACG CCA CGCCC                TATCGTTCCGGCCCC  46 28
HR116_RS21300 NONE
HR116_RS21305 NONE
HR116_RS21310 4625199 .. 4625217 + -13.1  -4.72007   GAGTGAGACGAAGAA             CCGCCGC CCTGT GCGGCGG             TTTCTTTTCCTCAGA 100 35
HR116_RS21315 4626199 .. 4626214 + -11.8  -5.26875   TGAGCCGTGCGCGAG              CCGCCC TTCG GGGCGG               TTTTTTCCTTCCGCC 100 38
        minC NONE
        minD NONE
        minE 4630522 .. 4630546 + -22.9  -2.90496   CGCCCAGGGTCCATA          CTGCGGCGGCC ATT GGCCGCCGCAG          TCGTTTCACCGAGCC 100 43
HR116_RS21345 4631248 .. 4631287 +  -4.9  -3.60098   CGCCGTTCTGAGCCT TC-CCCGCCG-CGTCCCGG CCCG CCGGGACGCCGCCCGCCGA  TTTCCGGTACCCCGT  55 30
HR116_RS21350 4632854 .. 4632885 +  -7.2  -3.35679   CGTCGCGCCGGAAGC      CCTG-GCGCTCGGCG GCG CGCTGGCTGCGCAGG      TTCTCGGTGGAACAG  56 178
HR116_RS21365 NONE
HR116_RS21370 NONE
HR116_RS21375 NONE
HR116_RS21380 NONE
HR116_RS21385 NONE
HR116_RS21390 4639648 .. 4639664 +  -9.4  -3.65902   AGGCTCGCTGCGAAA              GCGCGA GCGGA TCGCGC              TTTCCATCGCGTCGC  68 42
HR116_RS21400 NONE
HR116_RS21405 4644929 .. 4644956 +    -4  -3.59979   GGCTGTCGCCCTTGA        GC-GCCTGCACGC CGA GCTGGTAGGCCGC        TTTCCCATCGCCCGC  51 230
HR116_RS21425 4647196 .. 4647222 + -11.7  -3.28712   CGCCGAAGCTCTCCG         GGTTATCCACG CATAC TGTGGATAACC         TTGTGAACAGCCCCC  72 485
        rdgC NONE
HR116_RS21455 NONE
        sugE 4651434 .. 4651444 +  -2.4  -3.40597   TGCAACTCAGTACCT                 ACCG GCT CGGA                 TATTTCCGTCGCCGC  47 187
HR116_RS21465 4651717 .. 4651735 + -17.4  -5.04601   AGTTCGCCAAAAAAA             GCCCCGGC ATC GCCGGGGC             TTTTTCGTTTCTGCG 100 46
HR116_RS21490 4661535 .. 4661550 +  -3.9  -2.52676   CCGACACCACCAGCA              TCGCC CCATCC GGCGG               TCGCTTGCGCACCTC  40 239
HR116_RS21505 4666887 .. 4666901 +    -7  -3.01712   TGAGCAGGCCGGGCA               GCACCC AGA GGGCGC               TCTTGCCCAGCCGCA  51 331
HR116_RS21575 4678297 .. 4678331 +  -5.6  -2.70932   AGCCTCAATCCGCCA     GCACCTCGGCCAGG CTGACGA CCTGGCCGAAATGA     TGCTTCCACAGGCGC  46 40
HR116_RS21585 4679642 .. 4679663 +  -5.7  -3.28712   GACCTTGTCGCCAGG           CTCGCGGGT GAAG GCCCGCAGG            TTGTCCAGCGCCGCC  51 385
        phoA 4688789 .. 4688814 + -16.1  -4.98531   GACCAGAACGAAAAA         GGCGCGCCGGT TTCG ACCGGGGCGCC          TTTTTCATTTCGCGC 100 44
HR116_RS21655 NONE
HR116_RS21660 4698587 .. 4698610 + -12.4  -3.65902   GCTGGCCGAACTGCC          GCCGATCAGC ATCG GCTGAGCGGC           TTTCCCTACCGTCGG  75 7
HR116_RS21665 4700265 .. 4700281 +  -7.9  -3.16564   CCGTGGCGTAGTTGC              CCTGGGC CAG GCGCAGG              TTGGTCACCTGGCCG  54 359
        rapA 4707788 .. 4707814 + -16.7  -4.17878   GGCTGCGCGAAACGA         GAAGCCATGGG CATCC CCCATGGCTTC         TTTCATTTCATTTCC 100 52
HR116_RS21705 4708519 .. 4708544 + -18.3  -5.63517   AAAGCCGACGAAAAA         GGCCGTGGGGG GAAT CCTCCACGGCC          TTTTTTCTTTCAGCC 100 45
HR116_RS21715 4712819 .. 4712853 + -14.2  -3.14132   TGCAGACGCATCAAC     TGCGCGGCCAACCC ACTCATC GGGGTGGCCGCGCC     TTGCTCGCGGGACAG  80 114
HR116_RS21725 NONE
HR116_RS21730 NONE
HR116_RS21735 4716252 .. 4716275 +  -4.4  -2.62616   CTGCGCGGGAGGCTG          GCATGAGCCG GACC TGGCGCCTGC           TGCTCTGGCCGCTGC  41 20
        phnE NONE
HR116_RS21745 NONE
HR116_RS21750 4718690 .. 4718713 +  -2.2  -3.51329   GGCACGTTGACGGTA          CGCCGCTCGC CCTG GCGATAGACG           TTGTCCTTGACCGTC  48 273
HR116_RS21765 4722647 .. 4722663 + -13.7  -3.35679   CGTCGAACAGCAGCA              GGCCCAG CGC CTGGGCC              TTGTCGATCACCCGG  77 404
HR116_RS21775 NONE
HR116_RS21780 NONE
HR116_RS21785 4726971 .. 4727006 + -15.5  -2.66602   CACTGGAAATACCGG    CAAGCGCCGCGGAAG CTGGAA CTTTCCCGGCGCTTG     TCCATTGTTACGTCA  77 49
HR116_RS21795 NONE
HR116_RS21800 NONE
HR116_RS21805 NONE
HR116_RS21810 NONE
HR116_RS21815 NONE
HR116_RS21820 NONE
HR116_RS21825 NONE
HR116_RS21830 4741772 .. 4741786 +  -3.4  -3.48276   TGAGGCCAGCGAACG               CCGGCG TTC CGTCGC               TTCTCTGCCAGGCGA  49 38
HR116_RS21835 4742652 .. 4742685 + -11.1  -3.24188   TCGTGCATTCATCGC    GCG-GCCACGGC-AC GGGCAG GTCGCCGTGGCTCGC     TTCATCGTCGTCTGA  67 48
HR116_RS21840 4744346 .. 4744360 +  -2.7  -3.71284   CAGTGGTAGGCCACC               GAGGC CATCC GCCCC               TTGTGTTCCTCGCGC  53 484
HR116_RS21855 4747989 .. 4748011 + -10.4  -2.87132   GTCCTTGGTTGTTGC           CGCCGGCGTC ACG GTCGCCGGCA           TCTGTAGCAGCGCCG  59 483
        flgA 4760487 .. 4760521 +  -2.7  -4.05033   ATATGTAGAGGGAAA    GCCGTGGCCGGTAGCG CTGG CGCTACCC-CGGCGGG     TTTCTCTAAACTGGG  57 33
        flgM NONE
        flgN NONE
HR116_RS21925 4762773 .. 4762816 +   -11  -2.78816   ACCGCGATCGGGCAG GCGCAGGGCGCGTTCCAGC AATACCC GCTGCAA-GCGTCCCGCGC TCTCCTCGCCGATGG  60 506
        dsdA NONE
HR116_RS21950 4768767 .. 4768803 +  -6.4  -2.70932   CAAGGTCGCCACCGT   GGCCCCGAG-CAGCGTC TCGT GGCGCCGGCTGGGGGCG    TCCTTGGCCGGCGCC  47 507
HR116_RS21965 4771212 .. 4771235 + -18.2  -3.56092   GAGTTCGGAAGGGAC          GGGATGGCGG CAAG CCGCCATCCC           TTTCCGACCTCCTGC 100 41
HR116_RS22005 NONE
HR116_RS22010 NONE
HR116_RS22015 NONE
HR116_RS22020 4779520 .. 4779535 +  -6.1  -2.63631   TGCCGGGCGCTACAG              CGGCA GGCACA TGCCG               TCGTGTGCCAGTTCC  46 58
HR116_RS22090 4790858 .. 4790873 + -11.8  -5.38958   GTAGCGCTTGAAATG              GCCGGC ATTC GCCGGC               TTTTTCTTTATGGAT 100 57
HR116_RS22095 4791331 .. 4791360 +  -4.9  -2.75712   TATCTGTTGCATCGC       CGCGGTAGCCGCTG AGC CA-CGGATGCCACG       TCATTCCGTACCTGG  44 11
HR116_RS22100 4792262 .. 4792278 +  -2.1  -3.89524   CCGCTCGCCTCGTCC              CGCCATG ACC CACAGCG              TTTCTCCCATCGGCT  54 74
        tsaA 4792985 .. 4792999 +  -2.7  -3.55801   AGCGCAGCGGATTGA               GCGCC AGCGC GTCGC               TTTCGAAGACTTCCT  49 49
HR116_RS22115 4793804 .. 4793817 +  -2.3  -3.76482   CTCGGTACACTCAGT               GCCAG CAAC CTCGC                TTGTTCCTCATCTCC  52 85
HR116_RS22120 NONE
HR116_RS22125 NONE
HR116_RS22130 NONE
HR116_RS22135 NONE
HR116_RS22140 NONE
HR116_RS22145 4801660 .. 4801685 + -17.6   -4.1822   GCCGGAAAGCAGAAA         GCCCCTGCCG CGGATA CGGCAGGGGC          TTTCTTCGCCTGGCG 100 47
HR116_RS22155 4804168 .. 4804201 +   -16  -2.52464   AGCAACGCATAGGTG     GCGGCCATGCCCAG CAGCAC CAGGGCATGGTCGC      TGACTTCGCGCAGCG  73 495
HR116_RS22185 4808875 .. 4808891 +  -8.7  -3.58864   GGCTGAGACGCAGGC              CGACACT GTC GGTGTCG              TATTTCTGCTCGTAG  62 467
HR116_RS22235 NONE
HR116_RS22240 4820036 .. 4820061 +  -6.7  -3.28712   GTTGCTCGCCAGCCT         GCGACGCCGCTG AGT CCGCG-CGGCGC         TTGTCCGACCCGCGC  55 13
HR116_RS22245 4820784 .. 4820796 +  -3.3  -2.71712   GTTGGATAGGGTCAG                GGTCG CGC CGAGC                ATTTCCGCCGGCGGG  40 269
HR116_RS22270 4826038 .. 4826061 +  -5.2  -3.14132   GCCACCGCCTGGGTC          CGGCGGGC CACCCCGA GCTTGCCG           TTGATCCGCCGGGCG  49 78
HR116_RS22290 4832852 .. 4832876 +  -4.1  -2.50988   AGATTTCCCAGCGGA          CCCGCGCGC ACGACAG GCGCACGGC          ATCTTCCTACTCTCG  41 40
HR116_RS22295 NONE
HR116_RS22300 4834720 .. 4834763 +  -6.5  -2.71364   CACCGCTAGCCCGGG CGGCGCGACGGCGTCACTCG AAGCG CCCGTGGCGCCC-CTCGCCG TCCTTGAAGCGCTGC  49 32
HR116_RS22340 4841018 .. 4841060 +   -17  -3.18383   CCGCCGCCTGGGCAG GCGTTTCGGCGGATAACGCC TGG GGCGTTATTCGCCCTACCGC TTGCTCCCTCCCCGT  89 152
HR116_RS22350 4842415 .. 4842464 +  -6.4  -3.54543   CAGCCTGCCGGAAGC GCACTGACGGCTTGCCGCCCACCCC GGC GGGGTGGGCCGTA-GC-GCAAG-GC TTTGCCCGACTGGCT  59 19
        folM NONE
        folE NONE
        folX NONE
HR116_RS22370 4844657 .. 4844673 +  -2.1  -3.65351   TTGCCAACCCTGCCC              CAGACAC CAT GAGCCTG              TTTCGATGACCCTGA  49 55
HR116_RS22375 4845138 .. 4845163 + -18.3  -2.57132   TACGCGACGAAAAAA         GGCGGGG-CCCC ATC GGGGTCCCCGCC         CTTCTCGCCGCCGCA  86 146
HR116_RS22430 4854189 .. 4854200 +  -5.8  -3.36919   TACCTGCCATGTCGT                GCGT ATCC ACGC                 TTCTCCACGTTTTCT  52 189
HR116_RS22435 4855828 .. 4855845 + -14.1  -4.66833   CGCGCGCATGAAAAA             GCCCGGC AATA GCCGGGC              TTTTTGGGGTTGGCG 100 54
        mnmC NONE
HR116_RS22465 4862719 .. 4862737 +  -4.4  -3.72695   GGTTCGCCAGGTAAA             GACCGCCG ACG CGACTGTC             TTTCGTAGCGAACCT  56 139
HR116_RS22475 NONE
         ngg 4866919 .. 4866932 +  -3.8  -2.56596   CGATCTTCTCTTCCC               CCTC AGCCGC GAGG                TGCCTTCATGACCCC  41 1
HR116_RS22485 4868142 .. 4868173 + -17.2  -2.62184   CAAGGACTGAACCCG      CGCCGGCCTCCCCG CCTC CGGGGAGGCCGCCC       TCCTCTCCAGCCAAC  83 31
HR116_RS22490 NONE
HR116_RS22495 4871508 .. 4871538 + -10.5  -3.28712   CGCCCCCGCTCCGTA      G-GGCGAATAACCG CTCG CGGTTATCCGCCGC       TTATCCGCCGCCCCC  66 222
HR116_RS22505 4874915 .. 4874948 +  -9.3  -3.68222   TATCCGCCCTCCGAA     GCGGTCGGCGGCGCG CGAT CACTCCGCCGTCGGC      TTCTTGCGCTTGAGC  71 129
HR116_RS22515 4877877 .. 4877892 +    -6  -3.32516   CGGGGATGCGATCCG              GCGCCC GATG GGGCAC               TCTTGGTTCCTTTGT  52 76
HR116_RS22520 NONE
HR116_RS22525 NONE
HR116_RS22530 4880364 .. 4880381 + -12.7  -4.21936   ACCGTTAACGAAAAA             GGCCACC TCGG GGTGGCC              TTTTCGCGTTCTCGC  89 51
HR116_RS22540 NONE
        metG NONE
HR116_RS22595 4895102 .. 4895124 + -12.7  -3.53012   TGAGCCCAGGCATAC           GGGCGGACC GGGAG GGTCCGCTC           TTTCGCCCAGGACCG  76 38
HR116_RS22600 NONE
HR116_RS22605 4896845 .. 4896875 + -12.6  -3.47762   GCAGTGAGCGCGACC       CCGGGAGACGCA ACGGCAG TCCGTCTCCCGG       TCTTTCGTACGTGTT  76 34
        rsxA NONE
        rsxB NONE
        rsxC NONE
HR116_RS22625 NONE
        rsxG NONE
HR116_RS22635 4902812 .. 4902823 +  -4.4  -3.07816   GCCAGCGCGTCCGCG                TCAC CGGA GTGA                 TTGAATGAATGCCGC  45 6
         nth NONE
HR116_RS22645 4903777 .. 4903802 + -11.2  -5.03145   CGTCCACACCGCAAG         C-AAGCCCCGC AATTG GCGGGGCTTCG         TTTTTTCCGCCGTTC 100 48
        gloA 4934305 .. 4934337 + -24.3  -3.05384   TTCAGCAATCAGGAA      CGAAGAACCCCGGCT CAT GGCCGGGGTTCTTCG      TTCCATCGCAGGCGG 100 59
        pyrC NONE
         rnt 4938646 .. 4938663 + -14.1  -4.56597   CGAACCCATGAAAAA             GCCCCGC CGAA GCGGGGC              TTTTTCCAACGCGCG 100 158
HR116_RS22815 4939806 .. 4939822 + -10.8  -5.66684   CCTCTTTCAGAAGAA              CCGGGC CTGGC GCCCGG              TTTTTTTATGCCTTC 100 56
         bfr 4940479 .. 4940504 +   -19   -5.4505   GGGAACCACGACGAA         GCGCCGGCGG CCTGCC CCGCCGGCGC          TTTTTTCTTGCCGCC 100 43
HR116_RS22840 4947812 .. 4947847 +  -7.4  -4.33274   CGCACCACCGTGCCG    CACGAGCCCCGGAGAT CCGC ACCTCCGGGGCTCACC     TTTTGCTCCTCTCGC  76 242
        argF NONE
HR116_RS22855 4950746 .. 4950768 + -10.5  -3.70902   CAGGCCTGATACCTC           GGCGCCGTT CGGTC GGCGGCGCC           TTTCCCTATCGACCG  74 32
        yaaA 4951631 .. 4951655 + -14.9  -2.84325   GCAAGACTGATCTCC          CCGGCCCGCCG TCC TGGCGGGCCGC          TCCTCTTTCGGCACG  77 31
HR116_RS22865 NONE
HR116_RS22870 NONE
HR116_RS22875 NONE
HR116_RS22880 NONE
HR116_RS22885 4959641 .. 4959659 +  -3.1  -2.78679   CCCCGCGAGGAAACC             GGACATG CCCGA CATTTCC             CTTTCGATCCCCCGC  40 42
HR116_RS22890 NONE
HR116_RS22895 NONE
HR116_RS22900 4963973 .. 4963988 + -11.8  -3.72893   CACGGGGAGGAAAAC              GGCGGG TCGT CCCGCC               TTTCCTCGAGCGCTC  78 178
HR116_RS22905 4965618 .. 4965650 +  -2.6  -2.71924   ATTCCTCTACTTCCA     GTTCTGAG-CGAGGC CCAC GCCATGACACAGAGC      ATTTCCCGCCCCCTG  39 19
HR116_RS22910 4966822 .. 4966833 +  -5.8  -3.53012   ACGATTGAACGAACA                CAGC CAAG GCTG                 TTTACCCACGGGGCC  55 33
HR116_RS22915 NONE
HR116_RS22920 4969190 .. 4969223 + -26.1  -5.40072   GCTGAAGCGTCGACC     CGGCCCCCTGGCGGA GCGA TCCGCCAGGGGGCTG      TTTTTTTCCGACAAC 100 36
        arnB NONE
        arnC NONE
        arnA NONE
HR116_RS22940 NONE
        arnT NONE
HR116_RS22950 NONE
        arnF NONE
HR116_RS22960 4978723 .. 4978733 +  -8.2  -2.70932   TGCTCGCCGGGATCA                 CCCG CAA CGGG                 TCCTTGGCGGCGAAC  52 357
         cra NONE
HR116_RS22985 4986351 .. 4986371 +  -8.1  -3.14132   GTACCACGGCGGCAA            CGCCAGGGC CTC GCGCAGGCG            TTCGTGCAAGCGCGC  54 230
HR116_RS23000 NONE
HR116_RS23005 4988786 .. 4988831 + -10.4  -3.83205   GGTTCTGAACGGCAG GACCACGGGGCGCGGCGTT TTCCACCCT ACCGCCGTGCCCC-TGGCC TTTGCTATCCCGCCT  76 33
HR116_RS23025 4994335 .. 4994348 +  -3.1  -3.63744   CCAGTTGTCGGCAAA               CTGAT CCCG GTCAG                TGTTTTCCGGGCCGA  51 76
HR116_RS23030 4994768 .. 4994778 +  -4.6  -2.65815   CCATCAGCGCCGAGG                 CGCT GCC GGCG                 TGCTGTCCCTGTCCG  42 206
        nalD 4996835 .. 4996874 +  -2.1  -2.73364   GCTGGCGACCCGGAC TTCGCCGGCGCCAAGATCC ACCT GGA-CGTC-CGCCGCCGAA  TCCTTCGCCTGCACC  38 85
HR116_RS23050 4997672 .. 4997702 +    -9  -3.28712   GCGCCTGACCCCAGC      GAC-GGACGGGCA CGCGGA TGCCCGTCCCGAC       TTGTCCCGGGCCCCG  63 33
HR116_RS23055 4998522 .. 4998534 + -10.5  -3.04144   GGGCATCGGCGGATA                CCGCC TGT GGCGG                TATTCGCCCTACGGG  62 362
HR116_RS23080 NONE
        glpK 5006598 .. 5006630 + -15.7  -3.01712   ACTGTGACGAGCTGG     CGCCATTCGTCCGC CGCAAT GCGG-CGAATGGCG      TGTTCCCGGGCGCCG  81 34
HR116_RS23090 5007564 .. 5007587 + -13.8  -2.59569   GAGGCATTTCCCCTG          CCACGGCGCC GTTC GGCGCCGTGA           ATGTTCGTTTCAGAA  71 39
        glpD 5009384 .. 5009407 + -19.6  -3.44146   GCCAGCCAGAAACGT          CGAGGCCCGC TTTT GCGGGCCTCG           TTCGTTATGGAAGGG 100 43
HR116_RS23100 5009897 .. 5009911 +  -4.2  -2.72379   AGGTAAGGCACCACC               GCCG CCAGCAA CGGC               TCCTTGAAGGCTTCC  41 94
HR116_RS23110 5012219 .. 5012235 +  -3.5  -3.54424   TCCCACTCGCGACTG              CCGTCGG CGC CCTTCGG              TTTCGCGCCATGGCC  51 194
HR116_RS23145 NONE
HR116_RS23150 NONE
HR116_RS23170 5026987 .. 5027001 + -12.8  -2.62293   GGGCGACCGTCCCGT               CGCCGC TCA GCGGCG               CTTGATCTTCGGCTT  67 47
HR116_RS23185 5029289 .. 5029312 + -18.2   -4.8048   CGCACGCAAGAAAAA          GCCGGAGGCA TCGC TGCCTCCGGC           TTTTTCATGTCCGCG 100 52
HR116_RS23200 5031813 .. 5031842 +    -2  -2.70932   AGCAGGATGAACAGC       GGTCGCTTGCCT TCCACC AGCGGGGCGACC        TCGTTCACCACCCGC  38 351
HR116_RS23210 NONE
HR116_RS23215 NONE
HR116_RS23220 5035241 .. 5035272 +  -3.7  -3.53444   AAACCCGCGTGCCTC      CCGGAG-AGGCC CGCGGCCTT GCCCTGCTCCGG      TTTCCGGAGCCCTGC  51 48
HR116_RS23225 5036385 .. 5036418 + -18.3  -3.64703   GATCCGCACCGCTAT     CGACGAAAGGGCGACC CTC GGTCGCCCTTTTG-CG     TTTCCGTGCCCCGCC 100 39
HR116_RS23230 NONE
HR116_RS23235 5037271 .. 5037296 +  -2.4  -3.29511   ACACCCGCCCCCGTT         CGGCAG-GGCG AATAA CGCCACAGACG         TTATCCGCCGATACG  45 99
HR116_RS23245 5041356 .. 5041372 +  -3.6  -3.29263   GCAGTATGCGGATGA              CCGCCT GTCCA GGGTGG              TTGTAGAAGGAGTAT  46 72
HR116_RS23250 5042555 .. 5042568 +  -9.5   -4.1899   GGTACGCCAGGAAGC               GGCCC TGCT GGGCC                TTTTCCCTGGCGTCC  80 118
HR116_RS23270 5045905 .. 5045921 +  -2.1  -2.87132   AAGCCCGCTTCCGAA              GGCCCGT ATG ACCGACC              TCTCTCAGCACACGC  40 144
        mutS NONE
HR116_RS23280 5048878 .. 5048896 + -13.1  -4.86731   GCGCTGATACGCCAA             GGCCCGC AAACA GCGGGCC             TTTTCTTTGGCGACG 100 34
        gfnR 5057432 .. 5057452 +  -2.4  -3.66178   CAGTAAGGCGATTCA            CCGCTGCG ATAGA CTTGGCGG            TTTCCCGTTCCACCC  49 43
        yedE NONE
        yedF 5058957 .. 5058974 + -12.7  -4.30719   TGCAACGACAAGAAA             GCCGACC CTCG GGTCGGC              TTTCTTGTGCCAGGG  95 52
         map 5087346 .. 5087356 +  -2.4  -4.25104   ACCTCGGCAGCCTGA                 TCCG GCC CGGC                 TTTTGCTGCCAGCCG  62 26
HR116_RS23465 NONE
HR116_RS23470 5091463 .. 5091482 + -13.6   -4.8622   GCGGAGAAACGAAAA            GGGATCGC CGCG GCGATCCC             TTTTTCGTTCACACC 100 48
HR116_RS23480 5093891 .. 5093911 + -11.8  -5.67063   CTGTTCTCCCCCTGA            GCCTCGCC TACCC GGCGGGGC            TTTTTTTGTCCTGCG 100 83
HR116_RS23485 5094749 .. 5094771 + -10.6  -2.87564   CAGCAATCGTGGCAG           CCGGGCTT GCAGGCG AAGCCCGG           TATCTGCAGGCGTAA  61 326
HR116_RS23495 NONE
HR116_RS23500 NONE
        dapD 5097214 .. 5097226 +  -5.5  -3.63627   CTCGCCAGCGCCGCC                GGGTG CGC TACCC                TTTCCCCTGTAACCG  57 73
HR116_RS23510 NONE
HR116_RS23515 5098888 .. 5098940 +  -9.1  -2.75992   GACCGCCGGCTGAGC CCGCTCAGCGCGCCAGCAGTTCCGGC AGGT GCCGGGCCAG--GGCGCGGT-AGCGG TCCTCTTCGATCCGA  57 28
        plsB 5106249 .. 5106265 +  -5.8  -3.55444   TTTCCCTGTTCCGGC              CCGGCA ACCTA TGCTGG              TTTCCCGGGTCAGAG  57 98
HR116_RS23545 5106735 .. 5106754 +   -15  -3.06796   GCACACCGCGGCATG            CCGCCGGT GCGA ACCGGCGG             TTCCCTCCAGTACAC  78 42
HR116_RS23550 5107542 .. 5107565 + -19.6  -2.59564   GCCAGGTGAGTCGAC          GGACGGGGCG CGAT CGCCCCGTCC           CTTCTCCCGTCAGGC  90 32
        mexL 5112927 .. 5112957 +  -3.1  -3.05384   CAGCGCGCAATCGCG      CAGGTCGGCGA-CC GAGC GGATCGCCGTCCAA       TTCACTCGCGCCAGC  42 458
HR116_RS23615 5122770 .. 5122781 +  -7.2  -3.65991   AGCGGATGGTCTCTA                CCGG GCAA CCGG                 TTCTCTTCGCCAGCT  61 465
HR116_RS23625 5125174 .. 5125191 + -12.7  -5.24129   CACTGGCCTCCTCCA             GCCCCAC TCAG GTGGGGC              TTTTTTCTGCCCGAG 100 48
HR116_RS23630 5125936 .. 5125948 +  -4.7   -3.0082   GATACGCAGCACTAA                GCCGG ATT CCGCC                CTTCTTTCGTCGATT  47 26
HR116_RS23635 5126792 .. 5126811 + -16.4  -4.72272   TACGGAAGCCCAAAA            GCCCCGCC ATCC GGCGGGGC             TTTTTCATGGGCGGG 100 48
HR116_RS23730 5148478 .. 5148498 + -15.4  -3.28712   GGCCCTTCGGCAACG            CCGCCGCC CTGAT GGCGGCGG            TTATCCGCGGAACGA  84 14
HR116_RS23740 5151615 .. 5151638 + -10.2  -2.58544   CGCTAGAATTCGAGC          CCGTCCGGAG CTGC CTCCTGGCGG           ATTATCCGCCTGCCG  59 259
HR116_RS23745 5152411 .. 5152429 +  -4.4  -3.08679   GCGCAGCCGCTAGAA             TGTCCCGC AGC GCCGGGCG             TCTTCCGTGCCCGCC  45 90
HR116_RS23750 5153349 .. 5153362 +  -4.5  -3.79138   ACGCGCTCGGGGAAC               TCAGC TCTC GCTGG                TTTCCTCGCTCTCTT  56 104
HR116_RS23760 5155671 .. 5155697 +  -4.2  -4.29304   AGGACGAATAGTCGC         TCGGCTACCCGC CCT GCACGAAGCCGG         TTTCTCTTCTAATCC  66 89
        nalC 5158788 .. 5158800 +  -4.1  -3.82486   CGAAAGGTGCGCCAG                CATGG TGG TCATG                TTGTTCATGTTGCGT  57 278
HR116_RS23840 5176358 .. 5176388 + -11.2  -2.57463   CCGCGGACAGGGCGG       CCCCTCTCCC CTATCCAACCA GGGAGAGGGG       GTTATCCGCACGCTT  62 69
HR116_RS23850 5178116 .. 5178134 + -13.1  -3.89354   AGAAGACATGAAAAA             GCCCGCC ATCAA GGCGGGC             TTCTTCCTTTCACGA  83 40
HR116_RS23875 5185005 .. 5185033 + -11.8  -5.14563   AACGAAGCCCACGAA        GAGGATGATTGC ATCTA GCCATCATCCTC        TTTTTTCATCAGGCC 100 94
HR116_RS23880 5185774 .. 5185789 + -10.4  -4.10188   CGGGGATATGGAAAA              GGCACC CGTG GGTGCC               TTCTTTCTGCCTGTA  78 64
HR116_RS23915 NONE
HR116_RS23920 5192341 .. 5192352 +  -2.2  -2.94099   GGGATTGCCGAACCG                GC-CC CGC GGCGC                TCTATAATCGACCCC  40 44
HR116_RS23925 5194258 .. 5194302 +  -6.2  -2.90075   AGCCGTCGATCAGGG CCGCGCAGTCGGCGCGCCAGC GTTC GAGGGAGCGCAGGCTG-GTGG TGTCATTGACGCCGA  48 344
HR116_RS23955 NONE
HR116_RS23960 5198586 .. 5198611 + -13.3  -5.19275   CAGCCACGCCAGGAA         CGCCGCCGCGAG ATT TTC-CGGCGGCG         TTTTCTTTTATCCGT 100 72
HR116_RS23965 NONE
        nagA NONE
HR116_RS23975 NONE
        ptsP NONE
HR116_RS23985 5206095 .. 5206113 + -13.1   -3.8591   GGCGGATAACGAAAA             GGGCGGC AACTG GCCGCCC             TTCTTGCTTGTCCGA  83 186
        mltF 5213045 .. 5213072 +  -7.6  -3.33696   TGTCGAATACCAGCA        GCGGTCCGGCTGC ACC GCCGGCG-ACCGC        TTGCTTCAAGGCCAG  56 497
HR116_RS24020 5215332 .. 5215368 + -10.6  -4.13014   GCCCTCGCGCACCAG    GACCGCGCCCACCGGC ACTTC GCCGAGGGCCGCGGCC    TTTTCCGCCTCTGCC  81 502
HR116_RS24040 5219539 .. 5219562 +    -3  -2.52464   CCACTGCAAGGTGCT          G-CGCGTACCG AAA CGGTCGGCGAC          TCGGTTCAGCAGAAG  39 428
HR116_RS24070 5228301 .. 5228317 +  -9.3  -3.59979   CGCCCGCCCCGCCAT              GGGCGGC ATG GGCGCCC              TTTCGCCTGCGAAAA  68 69
HR116_RS24075 NONE
HR116_RS24080 NONE
HR116_RS24085 5231844 .. 5231865 +    -5  -2.87136   GTGCTACAACCGATC           AGCGCGCT CTGGGT GGCGCGCA            TCTGCTCCTTGCTCG  44 239
HR116_RS24095 5233425 .. 5233435 +  -4.6  -3.40403   TTGATCGCACATCCC                 GGTG CGC CGCC                 TTATCATGCCGCCCA  53 37
HR116_RS24100 NONE
HR116_RS24105 5235762 .. 5235779 +  -9.1   -3.3692   CGCGCCCGGGCTCTC             GCAGCGC TGAG GCGTTGC              CTTTTTCGCATCACG  63 16
        dctP 5236997 .. 5237020 + -10.2  -3.55761   CCGACGGCCGCTGCC          GTCGGCCGGG CGCG CCTGTCCGAC           TTTCCGGAGTACCTC  70 59
HR116_RS24115 NONE
HR116_RS24120 NONE
HR116_RS24125 5239683 .. 5239698 +    -9  -2.71712   CCCGGCGATCGCCTG              CACCGA ATGC TCGGTG               GTTTCCAGCAGGCGC  55 133
HR116_RS24135 5241767 .. 5241781 +  -4.9  -3.66018   TAGAGATGGTGCCAG               GCGCT GCTCA GGCGC               TTGTTGAGCTGGTCC  55 517
HR116_RS24155 5243996 .. 5244015 + -12.8  -3.72576   GGTCAGAAGGAACAG            GGGGCGCG TCGA TGCGCCCC             TTTCATGACCAAGGG  81 67
HR116_RS24160 5244802 .. 5244820 +  -6.6  -2.83343   TCCTGCCAACGCACG             TCGGCGAG AAC CTTGCCGC             TGTACTGGTCGATGT  48 392
        leuA 5250856 .. 5250873 + -12.7  -5.15634   CACGGAAGGGAAAAA             GGGAGCC AGGC GGCTCCC              TTTTTTCATGGGATC 100 45
HR116_RS24195 5253084 .. 5253110 +   -21  -3.18681   TTCGGCCGCCTCGCC         CTGGCTGACTCC GGC GGAGTCAGCCAG         TTGCTGCAATTGACC 100 232
HR116_RS24310 5273569 .. 5273585 + -10.8  -4.81551   GCCGCTGACGAAGAA              CCCGGC CTGGC GCCGGG              TTTTTCATCTCCATG 100 44
HR116_RS24345 5279991 .. 5280016 + -11.3  -5.04601   CGAGGCACCAAAAAA         GCCCGCAAATAT TTG AT-TTTGCGGGC         TTTTTCGTTTCTGGC 100 31
HR116_RS24375 5286602 .. 5286619 + -12.7  -5.14563   ACAAGGAAGCACAAA             GGCCACC CGTG GGTGGCC              TTTTTTCATACCCGG 100 111
HR116_RS24400 NONE
HR116_RS24405 NONE
HR116_RS24410 5293481 .. 5293526 +  -3.6  -2.78715   ATCCGGACGCGGCGG GCGCCCGCCGCGGCCCGCGG CCTTAC CCCCGGGCCGCCATCCCCGC TATACTCCCGAACTT  40 40
HR116_RS24415 5296453 .. 5296476 + -14.6  -4.20516   AAGCACTCTCGCCAA          GGTACGGGGC TGCG GCCTCGTACC           TTTCTTCCCTCAGGC 100 39
HR116_RS24440 5300185 .. 5300241 + -7.09999  -2.52676   GGAAGTCATCAAGTA AAAAAAGCG-GCCG-CCGGCCGCGGGC CTCCC GCCCGTGGCCGGACGGCACGATAATCC TGCCTTCACGCACTC  48 25
HR116_RS24445 NONE
HR116_RS24450 NONE
HR116_RS24455 NONE
        rlmF 5305041 .. 5305082 +  -7.4  -4.30719   CCCGGATCCGCTGCC GA-GCCAAGAATCGGACACC CCAA GGTGTCCG-TTCGTGACGTC TTTCTTCTACGAACC  76 57
HR116_RS24470 5307028 .. 5307038 +  -6.8  -3.72576   AAAGGAGCCGATGCC                 GCAG GTT CTGC                 TTTCCTCGAAGAACC  62 54
HR116_RS24485 5309678 .. 5309717 +  -9.3  -3.20382   ACCACTGGCTGTACT CGACCAGC-GCCGGACCGTC GTC GATGG-CCGGCAGCAGG-CG TTCCTGGATATCGAC  59 467
HR116_RS24495 5310486 .. 5310510 +  -4.9  -3.86252   TCTGGCTGATTCCGT          CATCGCCGC CCTGGTC GCCGCGGTG          TTCTATTTCGTCGCC  60 169
        yejK 5313338 .. 5313382 + -13.4  -2.52543   CGGTCTGCGCCAACA GCGGGTTGCCC-GCCGGCAGC GCCG GCGGCTGGCAGGGCGCGCCGC TGAATTCAGCGGCGT  66 496
HR116_RS24555 5320893 .. 5320927 + -11.2  -3.72576   GTAGTTCAGCGCGTA     GCCGCCGAGCAGCTCT TCC AGCGCCGCCCGGCGTC     TTTCGTCAAGCGCGG  73 74
        rhlB 5324586 .. 5324607 + -15.9  -5.04601   GGCGTGGAGAAAAAA           GGCGAAGCC ATCC GGCTTCGCC            TTTTTCGTTTCTGCG 100 46
HR116_RS24570 NONE
HR116_RS24575 5326827 .. 5326838 +  -7.2  -3.53444   CTGTCCCCCTGATGA                CCCG GCGG CGGG                 TTTGCGGCACACTCG  60 29
HR116_RS24580 5327508 .. 5327561 +  -5.9  -3.08015   AGGAGCTGAAGGAAG GCGGCGACTGACGGCAGCCG-CCGC CGGCGA GCGGTCAGTCGCCGT-AGATGTCGC TCTTGAAGTACTTGC  49 15
HR116_RS24630 NONE
        narL 5343139 .. 5343160 +  -2.9  -2.61274   GGCGGTGGAGAACGA           CCTG-GTGTG AGC CGCGCGCGGG           CTTGATTCCGGTCAA  39 16
HR116_RS24640 5343627 .. 5343683 +  -4.1  -3.57792   AGCGCCGCTGCGAAT GACGGCGAGGCCGGGGGCGGC-GGCT ATCCCC AGCCTGCCGAAACCCGCATCCCCGCC TTTCGGCCTCCCTCG  53 24
HR116_RS24645 5344278 .. 5344293 +  -2.4  -3.06696   GACCGAGGGAGGACC              CGATGG AAAC CCGCCG               TCTGTTCAACCAGGG  41 39
HR116_RS24650 NONE
HR116_RS24655 NONE
HR116_RS24660 NONE
HR116_RS24665 NONE
HR116_RS24670 NONE
HR116_RS24675 5348429 .. 5348458 +  -5.6  -4.37092   GCGGGCGCTCGCTCT       GCGAAGGCTGCGC TCAGT GCGCCCCCT-CGC       TTTTCTCCAGCGGCT  71 71
HR116_RS24685 NONE
HR116_RS24690 NONE
HR116_RS24695 NONE
HR116_RS24700 5353745 .. 5353762 + -14.1  -3.36175   CGCCGAAACGAAAAA             GCCCGGC ATCC GCCGGGC              TTCTCCCTGCCCCTT  77 116
HR116_RS24725 5359818 .. 5359839 + -15.1  -3.06302   ATAATCGCCCGCCCA           GTGGCGGGC CCCT GCCCGCCGC            TTCGATGGCGGTGGT  81 45
HR116_RS24730 5361258 .. 5361272 +    -7  -3.66288   GCATTGCCGGTGAGC               GGGCGG ATG CCGGCC               TTCTGTTGCAGGCTG  61 413
HR116_RS24740 5362851 .. 5362865 +  -5.8  -3.43553   TCCCGCAGCATAAAA               TGATAA CTA TTATCA               TTCGTTAATCCTTCT  55 79
HR116_RS24745 NONE
HR116_RS24750 5364348 .. 5364385 +  -4.7   -3.3422   GGTCGGCGTGCACCC   GCGCGAATGAGCGGAAA GATA TTTCCGCGCACCTGAGC    CTTTTTCCCCACCTC  50 16
HR116_RS24755 5366872 .. 5366901 + -18.6  -2.55074   ATCCGCCCTCCCCGC       CGCCGGGCCTGG TTACCC TCAGGCCCGGCG        TCACTTCCAGTTCGG  87 91
HR116_RS24765 5369506 .. 5369529 +  -2.3  -4.08706   AGGTTGTCCGCCCCC          GACTGGCAC GGCAGA GTGCCAGGG           TTTATCTCATAGGGA  57 364
HR116_RS24770 NONE
HR116_RS24775 NONE
HR116_RS24780 NONE
HR116_RS24785 NONE
HR116_RS24790 5372395 .. 5372405 +  -8.2  -3.29144   TCTGTGGGGCGAATA                 CGCC ACC GGCG                 TTATCCCCGACCTCC  60 69
HR116_RS24850 5387377 .. 5387410 + -11.7  -2.70932   CCAGCACGCCAGGCA     CATGGGGT-GGCGCGC CTA GCGCAACAACCCCATG     TGCTTGGCCCGCGCC  66 42
HR116_RS24875 5397066 .. 5397099 + -17.3  -3.14602   ACGGCGTTGAGCCAT     CGGCGCCCGGCCGGC TCGC GCTGTCCGGGCGCCC      TCTTCCTCAGGTGCC  89 42
HR116_RS24885 5399221 .. 5399231 +  -8.2  -3.63515   CGAATCGGCGGATAA                 CGCC TGC GGCG                 TTATTCGCCCTACCA  65 69
HR116_RS24905 5403390 .. 5403417 +  -9.8  -4.85782   AGCGCCCCTTGTTCA        CGCCGGTGT-CGC ATG GCTTGCACCGGCG        TTTCTTTTTCCGCAA 100 79
HR116_RS24910 5404491 .. 5404530 +  -7.8  -3.07816   GGCGAACTGAAGGAA  TCCTTCGGCGAACGTGC GGGAAAA GCGCGG-CGCCGAAGGC  TTCCATACGTCCGGA  54 31
        betT 5406649 .. 5406667 + -13.1  -3.10715   TGAGCGCAGGAAAAG             GGGGCGC GCAGG GCGCCCC             TTCCCTCATCCTCCG  71 38
HR116_RS24950 5414375 .. 5414398 + -13.2  -5.46698   ATGCGCAGGAAAAAA          GCGCAGG-AGC CTG GCTTCCTGCGC          TTTTTTCGTTTTCGG 100 65
HR116_RS24990 5424842 .. 5424854 +  -4.8  -3.14132   ACCTTTGGGCAAGCG                CGAC CGGAA GTCG                TTCCTGCCACGCGAC  48 75
HR116_RS24995 5426339 .. 5426351 +  -3.3  -3.55444   TAGAGGCCAGTACGC                CAGCG CCT CGCTA                TTTGCCGGATGGCCG  51 38
HR116_RS25015 5429840 .. 5429853 +  -3.7  -3.39895   TTCGAAAACATGAAT               CCGGG ATGG CACGG                TTCCTTCATAGACAC  51 123
        sfnG 5431003 .. 5431035 +   -17  -2.53876   GGCCTGAACGGCAAC     GGCGGCCGCC-AGGC GTTG GCCTCGGCGGCCGGC      TGGGTTAGAGTCGCG  83 34
HR116_RS25025 5431737 .. 5431766 + -11.3  -2.90075   CAACGGGATGTGAAC       GGCGCCGCGCGCCG ATT CGCCGCGCTG-GCC       TATGCTTGACGAGCC  64 28
HR116_RS25030 5432271 .. 5432284 +  -3.7  -4.07568   TGAGTCCCGACAGGC               GCGGC ACCA GCAGC                TTTTCGAAGAGACGC  61 61
HR116_RS25040 5434283 .. 5434321 + -17.4  -2.71263   CTGCCCCATTGACCG  GGC-GCGCGCCGGGCTG GACAAG CGGCCCGGCGCGCCGCA   TGCTTCGCCCCCATT  84 29
HR116_RS25045 NONE
HR116_RS25050 5435982 .. 5435992 +  -4.6  -3.63569   ATGAAATGGCACAGT                 GCCG CCA TGGC                 TTCTTCAGGCCTTGA  55 473
HR116_RS25055 NONE
HR116_RS25060 5439487 .. 5439501 +   -10  -4.27584   AGGCCATCTCCAAAG               CCCTTC TGC GAAGGG               TTTTGGCTTGCCCCT  85 100
HR116_RS25065 5441577 .. 5441591 +    -7  -4.11216   TGTCGTGAACCGCAC               CCCGGC TGC GCCCGG               TTTTGAGCCTGCGGG  69 129
HR116_RS25070 5443305 .. 5443326 + -11.6  -2.65112   TACGCTTCGCCCGCA           GCCAGAGC AGGTAC GCTCTGGC            TGCTCTCAGTGCATT  65 56
HR116_RS25075 5444943 .. 5444955 +  -3.3  -2.52464   GCCCGTAAGGGTGGA                GACAC GCA GTGGC                TCGATTCACGACAGC  39 248
HR116_RS25090 5448594 .. 5448632 + -14.5  -3.53031   CGCCTGATCCGCCCT  CCGAGC-GCGACCGTGCG TCAG TGCCCGGTCGCCGCCCGG   TTGGTTTACAGTGGC  83 34
        fieF 5449768 .. 5449826 +  -7.9  -3.21218   ACCACGTCGTAGCTG GCGGCCGGCCCGCTGAC-CGGATAAACGG GTC CCGCT-GCCCGCGGCGGCGGGCTGACCAC TTCGTACTCGCGGGT  54 223
HR116_RS25105 5451239 .. 5451261 +    -7  -3.49168   TGACACGGAACAGGC          GGCATGCCG TATAAT CGGCA-GCC           TGTTTCAGTTGTCAT  57 61
HR116_RS25110 NONE
HR116_RS25115 5452506 .. 5452531 +  -6.7  -3.14132   TGTGCCGGGGGTCGG         CGATGCGCGCC TGCA GGCGACCGTCG          TTGGTCAGCAGCAAC  52 424
HR116_RS25125 5454317 .. 5454349 +    -4  -3.55444   GGGCCTCGACCGCCC     GCCCGACC-GAGAAC CACG GTTCGCCGGCCAGGC      TTTCCGGCATCGGCA  51 408
HR116_RS25160 NONE
HR116_RS25165 NONE
        hemL 5464587 .. 5464608 +  -4.3  -3.05384   TTGCCCGCCCCGATC           CAGGAGGTG TCTT CCCCTCATG            TTCCGTACCGGCCGC  45 215
HR116_RS25175 5465579 .. 5465606 +  -3.3  -4.13014   AACGCTAGGAACCGG        GGGCCCCGC CCTCTATAAT GCGCGGTCC         TTTTCGAACTGTCCG  61 450
        miaB 5467016 .. 5467028 +  -3.3  -3.53012   ACCTTCCCGCCGCCA                CGGTG CAC CAACG                TTTCAGCGGGAACCG  49 70
HR116_RS25190 NONE
        ybeY NONE
HR116_RS25200 5469474 .. 5469501 + -18.4  -3.01924   CTGCAGAACTGAGCG        CGCCCCCTCCGC CACG GCGGAGGGGGCA         TCTTCCCGCGCCGTC  90 29
         lnt 5471213 .. 5471233 + -15.4   -3.1247   CCCCTCCTGGATAGA            CCGGCGCC CCTGC GGCGCCGG            TTGCGTCTCAGCGGT  83 47
HR116_RS25220 NONE
HR116_RS25225 5475994 .. 5476016 + -18.4  -3.30651   CACCCCGTGATGCCC           CGGGGCCGGT TTC GCCGGCCCCG           TCTTCTCCTATGAAG  93 31
HR116_RS25230 NONE
HR116_RS25235 NONE
HR116_RS25240 NONE
HR116_RS25245 5479302 .. 5479312 +  -8.2  -3.29511   TCGTAGGGCGGATAA                 CGCC ATG GGCG                 TTATCCGCCGCTGCG  60 98
HR116_RS25255 5481250 .. 5481273 +  -3.6  -3.75292   ACGGTACTCACCTAC          GCGCCGGCGG ATAA CCGCAAGCGG           TTGTTCGTCCTACGT  54 47
HR116_RS25320 5494138 .. 5494150 +  -6.2  -2.64155   GGCAAAGCCGCAGCG                GGCG AAGGC CGCC                TCGATTTCCGCGGCA  46 150
HR116_RS25330 NONE
HR116_RS25335 5497024 .. 5497038 +  -2.8  -3.12668   GTGCTCCAGCAGCAC               CTGG ATCCGCG CCAG               TTGCATCTGCGCGTC  44 78
HR116_RS25355 5499310 .. 5499339 +  -4.7  -3.17075   CCTCAGCCTCTGCTT       CGTCTGAGCCCGC CCCA GCGAGCGCTGCCG        TTCGCTTGACGGCCA  48 19
HR116_RS25360 5501213 .. 5501253 +    -9  -2.81547   GGGAAGGAAAAAACG GCG-AGGGCGCGGCG GGCAAATAGATA CGCCGCGCACTACGC  TCATTGGTGTGGAAG  57 3
HR116_RS25365 5502118 .. 5502146 +  -9.4  -2.52676   CTGTACCAGTCCAGC        CGGGTGCCGGCG TAGAC CACCGGCGCCCC        TGGCTTGGCCGCATC  54 220
HR116_RS25390 5508142 .. 5508152 +  -2.4  -3.84406   TGAGCTACGACATCA                 ACCC GCT GGGC                 TTCTTCTAGTAGGAC  54 6
         eat NONE
HR116_RS25400 NONE
        eutC 5512128 .. 5512142 +    -7  -2.71681   GCCGAAGGATGGGCC               GGCGCG CGT CGCCCC               TCCTTCGGCCGATTC  49 49
HR116_RS25410 NONE
HR116_RS25415 5513654 .. 5513674 +  -8.9  -2.57132   GCGTGGCGCGAAGAC            CCGCTGGGG ATG CGCTAGCGG            CTTCTGCAAGGCCAG  53 8
HR116_RS25425 NONE
HR116_RS25430 NONE
         ppa 5517467 .. 5517484 + -14.1  -4.93968   CCTCGCCGAAAAGAA             GCCCCGC AGCC GCGGGGC              TTTTTCATTCTCCCT 100 46
        mucE 5518964 .. 5518975 +  -4.4  -2.64973   CAGGGCTGGCTTCGA                CACA CGGA TGTG                 TCATCTCCCCTTCCT  41 271
        aqpZ 5519802 .. 5519826 +  -6.4  -2.71681   CGGCCGAGGAAACGA         CA-AGGGAGCC TGCG GGCTCCCGATG          TCGTTGCAAGGATTG  49 73
HR116_RS25455 NONE
HR116_RS25460 5523468 .. 5523488 +  -5.5  -3.63922   GCTACAGGGCTGCCC            TGGAAGT CTCGATA ACTTCCA            TCTTTTAACGAGAGT  57 253
HR116_RS25465 NONE
HR116_RS25470 NONE
HR116_RS25475 NONE
HR116_RS25480 5528297 .. 5528313 + -10.8   -5.1675   CCCCACCCCAGAAAA              GCCGGC CACAA GCCGGC              TTTTTTAATGCCTCC 100 199
HR116_RS25490 NONE
HR116_RS25495 5530838 .. 5530850 +  -3.3  -3.33696   GAAGTCCCCGGCAAA                GGTAG GGG CTCCC                TTGCTTGGGCGCGGC  46 55
         dxs 5532829 .. 5532839 +  -8.2  -3.63515   GACAACGGCGGATAA                 CCGC GTT GCGG                 TTATTCGCCCTACCC  65 54
HR116_RS25570 NONE
HR116_RS25575 5543953 .. 5543973 +    -9  -3.53012   CACGCCGAACGCGGG            CAAGCCTG AGGCA CGGGCTTG            TTTGCGCGCGGCGCG  65 17
        trxA 5545359 .. 5545370 +  -2.2  -3.32844   GCCAGGCTAGGCAGG                CGGA AAAA TTCG                 TTATAACGTAACAAA  45 482
HR116_RS25590 5545995 .. 5546034 +  -5.4   -2.5955   AAGCTGTAGGATCGT  TCCGGAGGCGCCGCGAGG GATT CGGCGCGGCGCCCCTCCA   TCCATTCTCGAGGCT  43 32
HR116_RS25595 NONE
HR116_RS25600 NONE
HR116_RS25605 NONE
HR116_RS25610 5549472 .. 5549487 + -11.8  -5.20216   CCCCCAACGGGAAAA              GGCGCC TTCG GGCGCC               TTTTTTCATCCTGTG 100 66
HR116_RS25615 5549936 .. 5549950 +  -2.1  -3.61398   TCGAAGCGGAAACGC              CGCAGC AGGC GCT-CG               TTGTTCGCCCGCGAA  48 90
HR116_RS25650 5558101 .. 5558133 +  -6.8  -3.28712   GCGAACGGCAACGCC      CCGCCGCCATCGCC CTCCC GGCCCTGGCGATGG      TTGTCCGGCGCGCCC  54 473
HR116_RS25660 NONE
HR116_RS25665 5559247 .. 5559257 +  -2.4  -2.75844   ACCCTGTACCAAATG                 GCAG TTG CCGC                 ATTTCCCCTCGGGGC  39 105
HR116_RS25670 5562370 .. 5562405 +   -11   -3.1544   GTCGAGGCCGCCGCG    GCCGGTCGCCGCGGCGG TTA CCGCAGCGG-GACGCGC    TTGGGTATCCTGTCC  67 42
HR116_RS25675 5563188 .. 5563213 +  -9.7  -3.72324   CCGCATACCTGATGA         GGTCGGCATCG CGCT TGATGCCGAGC          TTCTTCATGGCACTG  68 81
HR116_RS25715 NONE
HR116_RS25720 NONE
HR116_RS25725 5577320 .. 5577352 +  -3.4  -3.53761   CCGGCTCCGGTAGGG     CGCTC-GCCC-TGTCC CAC GGACAAGGGCCGACCA     TTTGCCGGGCGATTA  49 107
HR116_RS25730 NONE
        hpaB 5579479 .. 5579489 +  -2.4  -2.59191   CAATGACGCCCGCGT                 CGCC TCC GGAG                 GTTATCCCCATGTCC  38 35
        hpaC 5580464 .. 5580476 +  -3.3  -4.33417   CGCGCTGGATGAAAC                GGGCG ATC TGCTC                TTTCTTGTCGGTCAC  66 478
HR116_RS25755 NONE
HR116_RS25760 NONE
HR116_RS25765 NONE
HR116_RS25770 5585455 .. 5585481 +  -3.7  -3.06183   GTGCTGGCGGTGGAC         GGCGGCT ATCTCTGCGCCTG AGCCGCC         TTCGCTCCGGATGCA  45 5
HR116_RS25775 NONE
HR116_RS25780 5588686 .. 5588726 + -12.6  -2.73364   GGCCGTGCAGGCTCT GGCCGGCGCCTGACTAGCCG CCC TGGCT-G-CAGGCGCTGGCG TACTTGCGGTAGGCC  68 13
HR116_RS25790 NONE
HR116_RS25795 NONE
HR116_RS25800 NONE
HR116_RS25805 5592680 .. 5592704 +  -7.8  -4.56597   CCAGCCACGGAAAAA         CCCCGGAACGC GATC GCCT-CCGGGG          TTTTTCACAGCAAGC  83 48
HR116_RS25825 5596717 .. 5596737 +  -4.6  -4.07687   GCACCATCGTCGATA            CTGCTGGC AATCC GCCGACAG            TTTTCAAGAGGCCAT  63 145
HR116_RS25830 5597629 .. 5597651 +  -6.8   -3.8211   TCGCGTAGTCGAGCC           CCTCGGCGGC GAT GTCGACGCGG           TTGTTGTGGGTGGAC  64 515
HR116_RS25840 5599420 .. 5599440 +  -5.4  -2.82834   CGACGGAGCGTAGCG           GCGCGGGAC GCCG GTCCTG-GC            TATGATGGTGCCATG  46 57
HR116_RS25845 5599920 .. 5599930 +  -8.2  -3.63515   AGTATCGGCGGATAA                 CGCC CAT GGCG                 TTATTCGCCCTACAG  65 94
HR116_RS25865 5608066 .. 5608098 + -15.5  -4.15044   CTGAGCGCGCCCGCT      CCGGCATCCCTGCGC CGC GCGCGGGGATGCCCA      TTTATTCCGAGCCGG 100 37
HR116_RS25870 NONE
HR116_RS25875 NONE
HR116_RS25880 5611661 .. 5611679 +  -3.1  -3.64703   GAAAAGACGCGATGG            C-GGGTGC CGTC GTACCCCG             TTTCCGTGCAAAGAC  51 66
HR116_RS25895 NONE
HR116_RS25900 NONE
        hpaE NONE
        hpaD NONE
HR116_RS25915 NONE
HR116_RS25920 NONE
        hpaH 5620288 .. 5620309 +  -2.9  -3.65351   CTCGGCAGCATCTCC           TGCCGTTTC GTCT GAGGAGGCA            TTTCCATGGACCTGC  51 11
        hpaI NONE
        ccoG NONE
HR116_RS25950 5626898 .. 5626940 + -12.8  -3.75884   TTAGATTGCAGGCTC CGGCCGGCG-CC-CCGTC TCCCCCCTC GACGGCGGTCGCCGGCTG TTCATTTCTTTCGGG  81 222
        ccoN 5628395 .. 5628406 +  -7.2  -2.57013   CCGCATGGCCTGAGC                CGCG ACAG CGCG                 TCCCTTCCCTTCCCG  51 28
HR116_RS25960 5628706 .. 5628728 + -12.7  -2.53392   GCACTGGGACAAGAA           TTGGCCGGC ATGAC GCCGGCCAG           TCGCTTCAGGGCTTT  67 13
HR116_RS25975 5632298 .. 5632321 +  -6.7  -2.56596   GTCGGTCAGCGACAG          TCCC-TGCGC CAGGC GCGCGCGGGA          TAGCTTCATCACCGG  47 252
HR116_RS25985 NONE
HR116_RS25990 5636404 .. 5636420 +  -7.3  -3.38291   CCTCGATACGGCGTT              GACTTGT TCA ACAGGTC              TTATCGAGTTGTCGC  58 108
HR116_RS25995 5636944 .. 5636986 +  -5.6  -2.79679   ATTAGAAAAGTCGCA CTCCGGCACTTCATGCG TTTGAACTTT CGCAAGG-GTGTCGGAG TGTCATGCAAGTATT  46 40
HR116_RS26000 5638287 .. 5638297 +  -2.4  -3.87373   GCAAACTCTAGGAAC                 GACC CAT GGCC                 TTTCTCGACGCTCTC  54 30
HR116_RS26005 NONE
HR116_RS26010 NONE
HR116_RS26015 5643135 .. 5643145 +  -8.2  -4.25104   CGCCCTGGAAGAACC                 CGGG GAC CCCG                 TTTTCCTCCAGGGCC  76 308
HR116_RS26030 NONE
HR116_RS26035 NONE
HR116_RS26040 NONE
HR116_RS26045 NONE
HR116_RS26050 NONE
HR116_RS26055 5651995 .. 5652013 + -13.1  -3.51232   CGCGCTTGCGACACA             GCCCCGC GGCCG GCGGGGC             TTGCTTTACGAAACG  76 56
HR116_RS26075 5657919 .. 5657931 +  -4.1  -2.78935   AGCTCGGCGAGCAGT                TCGAG CAA TTCGA                TCTGGTGGACGATAT  41 288
        fepB NONE
HR116_RS26090 NONE
HR116_RS26095 5662005 .. 5662015 +  -6.8  -3.01712   CGACCCGCACGTTGA                 GGTC GAA GACC                 TGTTGCAGAGCGGCC  51 457
HR116_RS26105 5663434 .. 5663459 + -10.4  -3.09759   AGAATCAATAGCATG         GCGGCCTTCC ATTCGA GGAATGCCGC          TTCCATGACTGTCTT  62 91
HR116_RS26110 5665026 .. 5665041 +    -6  -3.75332   CCGGCCGGGAAACGG              CGCAGG TCGT CCAGCG               TTTCCATTCCGCCCT  59 403
HR116_RS26120 NONE
HR116_RS26125 NONE
HR116_RS26130 NONE
HR116_RS26135 5669476 .. 5669510 + -19.3  -3.14878   GCAAGCAAGTGAAAG     GCGCGGGCGGAAGGC TTCGC GTCTTGCGCCCGCGC     TGTTCCGTTCAAGGG  93 29
HR116_RS26140 5670041 .. 5670057 +  -5.8  -3.82097   ACCGGCGCGGTATGC             CGCCGCG ATGG CGCG-CG              TTTCGTCGATTTCCG  60 206
HR116_RS26150 5672106 .. 5672128 + -13.4  -2.57211   TCCAGGCGCAGGTCG           CGCGCCAGCA GGT TGCTGGCGAG           GTTCTCGCGGCGGGT  67 175
HR116_RS26160 5675737 .. 5675750 +  -3.1  -3.34013   TGCGCCGCCTCGAAC               GC-CTC GCC GAGCGC               TTCGTTGACCGCCTG  46 187
HR116_RS26170 NONE
HR116_RS26175 NONE
         xth 5678732 .. 5678753 +  -5.7  -3.04263   GTGGGGTACGGCGCC           TCGCCCCAG TACT CCGGGACGA            TCTTCCAGATGCGCT  47 154
HR116_RS26190 5680471 .. 5680486 +  -6.2  -2.64616   AATGACAAGTGAGGG              GAATAG CTAT CTATTC               TGCTATCCATAAACG  46 399
         piv 5682131 .. 5682159 + -17.5  -2.91276   GTCCGGGACAGGTAG        GGCGCATAACGCC AAC GGCGTTATCCGCC        GTTTATCCCGCGCAG  87 138
HR116_RS26205 5683304 .. 5683317 +  -3.7  -5.00616   TCCGCCCGCGATCCG               CCGGC CGGT GCCTG                TTTTTTCGCCGGCAA  81 43
HR116_RS26210 5684196 .. 5684217 +  -4.3  -3.53811   AGCGTTTCACAGGGG           GCTGCGGAG GATT CTTCGTCGC            TTTCGGCACGCTGCG  53 92
HR116_RS26215 5686005 .. 5686015 +  -8.2  -3.67976   CAGGTTCATCTTCAG                 CCGC ACC GCGG                 TTTCCAGTTCCTGGC  65 368
HR116_RS26225 NONE
HR116_RS26230 5689268 .. 5689292 +  -2.8  -3.86015   CCAGCAGGAGGAAGG         CGCC-GAC-CGC GGC GAGTGTCAGGCG         TTTCTCGGGAAAGTC  56 259
HR116_RS26245 5691593 .. 5691642 +  -6.9  -2.72379   TACGAGGGTTAGCGA GCCCCCGCGCCACGGCC-CCGC CCGAGAA GCGGAGGCGGTCACGCAGGGGA TGGTTACCGGGTTCC  49 29
HR116_RS26250 5693075 .. 5693088 +  -3.1  -3.05384   GGAGCTGGAGAGCGT               TCCAGC CTC GC-GGA               TTCGCTCGGCCCGAA  43 99
HR116_RS26255 NONE
HR116_RS26260 NONE
HR116_RS26265 NONE
HR116_RS26270 NONE
HR116_RS26310 NONE
HR116_RS26315 5709252 .. 5709273 + -15.1  -5.00616   TTCTGAAGCTTCCGT           CGCGCGGCC CGTG GGCCGCGTG            TTTTTTCCGGGACAG 100 35
HR116_RS26320 5710516 .. 5710567 +  -5.7  -2.52464   AGAGCCGGCCCTGTT CGTCGAG-GCGGAAGTCGGTGCGGC TGTA GCCGCTCAG-CTTCAGCGCCCGGTG TACCTTCAGCGCCAG  44 235
HR116_RS26335 NONE
HR116_RS26340 5714903 .. 5714913 +  -8.2  -3.29829   CTGCAGGGCGAATAA                 CGCC AGG GGCG                 TTATCCGCCGCTGTC  60 183
        mexG NONE
        mexH NONE
        mexI NONE
        opmD 5721889 .. 5721912 +    -8  -2.57132   CACCAGGCTGACGCG          CTCCCCTGCC AACA GGCTGGAGAG           GTTGTCGCGGGCCAC  50 390
HR116_RS26370 NONE
HR116_RS26375 NONE
HR116_RS26380 NONE
HR116_RS26385 NONE
HR116_RS26390 NONE
HR116_RS26395 NONE
        pdxH 5729628 .. 5729678 + -11.9  -3.73775   CCGCGGCCTCGGAGC CG-GGCCGTAG-GGCGAATAACGCC ACC GGCGTTATCCGCCGCTGCGCCGACG TTTCATCGCGGTAAA  78 138
HR116_RS26405 5731035 .. 5731072 +  -6.3  -3.01712   AGGCATCCGTGCGGG  TGCC-G-GGCGCTGCGCG CCTAT CG-GCAGCGCCTCAGGCC  TCTTCCGCCCGCCCC  51 99
HR116_RS26460 NONE
HR116_RS26465 5754242 .. 5754255 +  -3.1  -3.09516   CGCACATCCCGACGC               CCTTT CCCG AGAGG                TTGCATGATGAAAAC  43 4
HR116_RS26470 NONE
HR116_RS26475 5756005 .. 5756032 + -18.4  -3.03771   GCCTGAAAACGAAGA        CCCCCTGCGGCC CGAG GGCGGCAGGGGG         TCTTCGAAGGTCTGC  90 35
        uvrA 5761059 .. 5761085 + -15.9   -4.8048   GGCGCTCATGAAAAA        GCCCCTGCGGCC GTGA GGC-GCAGGGGC         TTTTTCGTATCCGCG 100 47
HR116_RS26775 NONE
HR116_RS26780 5807645 .. 5807666 + -14.4  -4.25104   CGCCTGAAACGAAAA           CGCCGCGC ATATAA GCGCGGCG            TTTTCGTAGCGGCCC 100 34
        hemJ 5811001 .. 5811015 +  -2.8  -2.65993   GGTGGTGCTCAAACC               TTTCTG ACC CAGGAG               TCCTGTCCATGTCCT  39 19
HR116_RS26810 5812056 .. 5812081 +  -2.4  -4.03234   GCTTGTGGGCGCCAA         GGCCGCCGAT TAGGCT GTCGGCTGCA          TTTCTCTCACCCCAG  57 89
HR116_RS26815 5813209 .. 5813233 + -12.1  -3.54129   CGCAACCCCTCGCGA          CGGGCGGGG TCCAATT CCCCGTCCG          TTTCGGAGAAGTCTC  75 44
HR116_RS26820 5814132 .. 5814142 +  -2.4  -4.09685   TGGCCCAGGTCCGCA                 GCGC GGC GAGC                 TTTTCCGCCATCAGC  58 106
HR116_RS26830 NONE
        coq7 5816748 .. 5816776 + -20.5  -4.01888   CTGAATCGCACGCAT        GAAAAAGCCCGCT CGA AGCGGGCTTTTTC        TTTCTCGTGTGCGAT 100 37
         crp 5819261 .. 5819278 + -12.7  -4.74801   AGCACCCATGAAAAA             GGCCGGT CGCA ACCGGCC              TTTTTCATGGGGTTC 100 43
HR116_RS27030 NONE
HR116_RS27035 5851026 .. 5851057 +   -13  -4.64676   CCAGCCGGGCACAAA      AAAGGCGGATGACG CAAA CGCCATCCGCCTTC       TTTTCTTCCGCCTCG 100 288
HR116_RS27090 5864526 .. 5864545 +  -6.4  -3.88291   CGCACGCGCTCGACG            CTGGCG CCGGCTCC CGCCAG             TTTGTCCGGATGGTG  62 114
HR116_RS27110 NONE
HR116_RS27115 NONE
        pdxA 5872041 .. 5872076 +  -8.8  -3.57144   AAACCGCCTACCAGA    TGGCGGCCAGCCGCTG CTGA CGGCGGTCGGCCATCG     TTTAGCCCTGCCGGC  65 6
        rsmA NONE
        apaG NONE
HR116_RS27135 NONE
        glpE NONE
HR116_RS27145 5876804 .. 5876824 +  -6.1  -2.63715   CTGTCGGAATGGTAC            CTGCGGGTT CGC AAGTCGCAG            TAGTCTGCCATCGGT  46 2
HR116_RS27150 NONE
HR116_RS27155 5879838 .. 5879850 +  -4.7  -3.13299   CGGCCGTCCACGGGA                GCCGC CAT GCGCC                TGTTCGCTATCGTCC  48 114
HR116_RS27160 NONE
HR116_RS27165 5881648 .. 5881683 + -10.5  -3.42996   GCTTCGGGAGTCAAC   GC-CTGGCC-ACGCCAT TCGA ATGGCGCCGGCCAGAGC    TTCTGCTGGATCCTC  65 47
        plsY 5883411 .. 5883445 +  -8.4  -3.61715   GGCCGCTGCGCAGCG     CCTGGTTGGCGCTGAC GCC GCCGGCGATCACCAGG     TTCTTCAGGCCGGTC  62 298
        rpsU 5884695 .. 5884712 + -14.1  -3.71649   AGTGATCGTGCCTCA             GCCCGGC CCCG GCCGGGC              TTTCGGCTTTCCGCC  84 62
HR116_RS27195 5885233 .. 5885245 +  -3.3  -4.07568   GCTGCCGCTCTGCGC                CCACG CGC CGTCG                TTTTCGAGAACACCA  58 81
HR116_RS27200 NONE
        rpoD 5889196 .. 5889218 +  -9.1  -5.27938   CGAGTGACGAACGAA           CCCCCGG CCTGAAAAA CCGGGGG           TTTTTCTTTGCCGCT 100 34
HR116_RS27210 NONE
HR116_RS27215 5893133 .. 5893149 + -15.1  -3.74347   CCCACCACCTTCAAA              GCCGCGC ACT GCGCGGC              TTTGCGCTTTCTAGG  90 34
HR116_RS27220 5893634 .. 5893648 +  -7.1  -2.80113   ATCGGCTCACAAAAT               GAGCC GAATA GGCTC               TCTAATCGGCTCATG  49 244
HR116_RS27225 5894807 .. 5894820 +  -4.5  -3.19463   CTGAGCGCCTGCACC               GGGCT CACC AGTCC                TTGATGCGTCATCGC  47 37
HR116_RS27230 5895404 .. 5895415 +  -3.6  -2.53263   ACGATATCGATTCCA                TCGC CAAC GCGG                 TAACTTCGAAGTACC  39 206
HR116_RS27240 5898545 .. 5898555 +  -8.2  -3.67296   TGAGCCAGGGGTCGC                 CGGC GTG GCCG                 TTTCCGTGAGTCGTA  65 6
HR116_RS27245 NONE
HR116_RS27250 5899711 .. 5899726 +    -4  -2.74144   TGCCCGAATGACGGA              GAATCG CCCA TGATTC               CTTTCGGCCTCAGCC  42 30
HR116_RS27255 NONE
HR116_RS27260 5900865 .. 5900885 +  -2.5   -5.0538   CCAGGGTCGATACGG           TGTCCGGC GCGTGA GCCGG-CG            TTTTTTCGCGTCACC  77 226
HR116_RS27270 5901742 .. 5901754 + -10.5  -2.56596   GTCTTGGCATCCAGG                GCGCC CTC GGCGC                TGGCTTCCTCCAGCG  57 232
HR116_RS27280 5902976 .. 5902992 +  -2.2  -3.53012   ACGAATTCACTGACA              GTACGG CTACA CTGTGC              TTTCCCGGCAAGGAG  47 109
HR116_RS27285 5903432 .. 5903453 + -18.7  -3.39803   CGCCTGATTCCTTCC           CGCCGGGCC GCAC GGCCCGGCG            TTCTCCCTCTCCCTG  95 34
HR116_RS27290 5904509 .. 5904525 +  -6.5  -3.84406   GCAGGCCGAGGGCAC              GCTGGAC CAC GTCGAGC              TTGTTGTCGTAGAGC  62 287
HR116_RS27300 5906130 .. 5906142 + -10.5  -4.23999   CAGCTCGCGCAATTG                CGCCG CCA CGGCG                TTCTTTTCCGTCTCC  85 121
HR116_RS27310 5907454 .. 5907493 + -11.2  -3.64703   GACCTGCAGCCCTGA  CTCAGCGCCG-CGCGGCGG TCG CCGCCGGGTCGACGCAGCG  TTTCACTGCGCGAGG  73 26
HR116_RS27345 5913242 .. 5913267 +  -3.1  -3.81146   TCGCGGGCGGCCAGC         CAGTCGCGCAC TTCC GCGCACCACTG          TTCTTCCTTCAGCAC  56 64
HR116_RS27360 NONE
HR116_RS27365 5918718 .. 5918735 + -14.1  -4.98531   ACCGCGCGATAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTCCTTTCCGGC 100 44
HR116_RS27375 5921152 .. 5921164 +  -6.2  -3.13403   GCTGAGCAGCTCCAC                CGGC GGATG GCCG                TCTTCCTGCCAGCGC  51 170
HR116_RS27385 5923108 .. 5923122 +  -5.6  -3.31144   TGGTGCAACTTCGCC               GATCCG GCA CGGAAC               TTCTCCGCGTCGAAG  51 485
HR116_RS27405 5925451 .. 5925476 +  -3.3  -3.11634   CAGAGCCGATATCCG         TG-CCGGCAC AAGGAAC GTGCTGGCCA         TTGGCTGGTCTACAA  44 41
HR116_RS27410 NONE
HR116_RS27415 5927167 .. 5927188 + -17.3   -5.1675   CGCTGGTGACGAAAA           GCCCGAGGC CTGT GCCTCGGGC            TTTTTTCATCGGTCG 100 32
HR116_RS27435 5931750 .. 5931796 +    -8   -3.5764   CCCTTCCCGTTGCAG GTCCTGCGGGCAGGCATCGAG CAGCGC CTCGATG-CTCTCCGCGGTGC TTTCCAGGTGACATT  60 238
HR116_RS27460 5935447 .. 5935465 + -13.8  -4.09243   TCGGGCAATAAAAAA             CCCCGCCT TTT GGGCGGGG             TTTTGCAGACCTCTA  90 56
HR116_RS27465 NONE
HR116_RS27470 5937019 .. 5937054 +  -7.4  -2.78384   GCTGCCCGCCGAGCA    CCTGGCT-GGCCCGGCG GAT CGCCGCGCCCATCCGCG    TGTAGTAGCCCGGCG  51 313
HR116_RS27505 NONE
HR116_RS27510 NONE
HR116_RS27515 NONE
HR116_RS27520 NONE
HR116_RS27525 NONE
HR116_RS27530 NONE
HR116_RS27535 NONE
HR116_RS27540 NONE
        nirJ NONE
        cobA NONE
HR116_RS27555 5951611 .. 5951627 + -15.1  -3.70902   GGCGCCCAGAAAAAA              GCCCCGC ATC GCGGGGC              TTTCCGTCTCAGGCG  90 317
HR116_RS27605 NONE
HR116_RS27610 5965193 .. 5965208 +  -6.8  -3.54109   TTCCTCCAGGCTGAC              GGCGACG AAA CG-CGCC              TTCTGGTTCGGTTGC  58 150
HR116_RS27640 5970460 .. 5970483 +  -6.6  -2.71268   CTCCGCAGCAAAGCA          GCAGCCGG CGCTGAAC CCGGCGGC           TAATCTCTGATCCAA  49 12
HR116_RS27645 5970928 .. 5970961 + -11.7  -2.73721   GCGCGCCTGCGGTTG     CATGGTGCGACATCC GCCA GGAAGTCCCGCCATG      TCGTTCCCGCTTCGT  66 133
HR116_RS27650 NONE
HR116_RS27655 NONE
HR116_RS27660 5972877 .. 5972892 + -11.8  -3.06796   CGCCGCTGTGAACCT              GCCGGC CCGC GCCGGC               TTGCGTACACTAGGG  68 30
HR116_RS27665 5973970 .. 5973991 +  -4.3  -4.07687   CGCGTGGCAGGCGAG           GGAACGGCA AGTG TGCCGGTGC            TTTTCCGCGGGAACT  61 87
        rarD 5975001 .. 5975058 +    -7  -2.81547   CCGCCTTCCCCAGCC GGGC-TGACGTTATCCCCAGGCTTGCGG AACT CCGCAAGCCTGGCGAAAAAA-CACGCAC TCCTTCCTATCCCCC  49 19
HR116_RS27685 5979196 .. 5979213 + -14.1  -5.09521   GCAGCGCAACGAAAA             GCCGCCC CGAG GGGCGGC              TTTTTCATTTCTTCG 100 51
HR116_RS27700 5981536 .. 5981580 +  -6.1  -3.04144   GCGATGACTCGGCAG GCGCCAGGCGTCCTCGGTGAG AAA CTGGCGGATATCGCCAGGCGC TATTCGCCCTACCCC  49 6
HR116_RS27710 5983164 .. 5983186 +  -4.8  -4.11216   GGCGCGGCGGTAACA           CTGGGCACAA TTA TTGTGCACAA           TTTTCCCAATGCGAC  65 65
HR116_RS27715 5985344 .. 5985361 +    -4  -4.08767   GCGAGGATCAGCCAG             GCGCGC GAGGCG GCGAGC              TTTTCCGCCAGTCCG  61 171
HR116_RS27735 NONE
HR116_RS27740 5988801 .. 5988842 +  -2.7  -4.60487   TGGTGCCACGCTGAA CCGAACGGGCCGGCGAAAA ATTT TTCCCGCCGGCCCTATCAC  TTTTTCCGACTCGTC  68 27
HR116_RS27745 5991329 .. 5991339 +  -8.2  -3.63515   CGTAACGGCGGATAA                 CCGC TTC GCGG                 TTATTCGCCCTACCG  65 58
HR116_RS27755 5993341 .. 5993362 +  -2.2  -2.70932   GCCTGCCGCCGATCG           TCTG-CGCG TCGTC CGCGACTGA           TCCTTCCAAGGAGCC  39 4
HR116_RS27760 NONE
HR116_RS27795 5999802 .. 5999830 + -17.5  -2.71712   GCACCCACCTCGTAG        GGCGAATAACCGC AAC GCGGTTATCCGCC        GTTTCCACGGCGCAG  84 132
        mdtD NONE
HR116_RS27815 6005623 .. 6005653 +  -2.5  -3.57263   TGCTGCGCTGGTTCT      TCTACTGAGCGGCG AGCG CGCTGCA-GGTAGG       TTTGCGGGTGAAGGT  49 18
        dbpA 6008247 .. 6008271 + -10.6  -2.87132   GCGCGCCGCCGCTTC          GCTCGCCGGG CCCGC TCCGGCGCGC          TATATCGCCGCCGGG  61 40
        yccS 6010971 .. 6010983 +  -7.7  -3.28924   GGCGTTGGCGAAGCT                GGTCA CGT TGACC                TTCTGCAAACGGCTG  56 301
HR116_RS27855 6015694 .. 6015728 +  -2.9  -2.82023   CGGCCGCTCGTCGCG    CC-GCTCAGGGCAGGAC TTC GTCTT-CCTTGAACTGG    TCCTTGATGTAGGTG  40 64
HR116_RS27870 6018613 .. 6018649 + -17.3  -2.90349   CGGTAGCGCGCCGGC    CGCCGGGGAGACGGG CAAGGAA CCCGTCTTCCCGGCC    ATTTCCGTTTCCAGC  87 73
HR116_RS27875 6020031 .. 6020041 +  -8.2  -3.63515   CGCATCGGCGGATAA                 CGCC CCT GGCG                 TTATTCGCCCTACCG  65 148
        hydA 6024999 .. 6025046 +    -9  -3.05384   GAGCGCTGATCCTTC CCGCAATACCGGACCGGCCCGT AGAG GCCGGACGGTGCCGTATTGCCG TTGACTGCCCCGAGA  60 32
HR116_RS27895 NONE
        preA 6027793 .. 6027823 +  -9.7  -2.89564   GGCACGCTTCCTGCG      TGCCGCTGCG-GTC CGAC GACGCGCAACGGCG       TCTGTCGGATCGACC  58 90
        codB NONE
HR116_RS27910 6030768 .. 6030791 +  -6.6  -3.36273   GCCCAGACCTTGGAG          CCATGCGGGC GGGT GCGCGAATGG           TTCATCTTCGCGCGG  55 372
HR116_RS27935 NONE
HR116_RS27940 NONE
        metF NONE
HR116_RS27950 6039941 .. 6039951 +  -5.4  -3.32769   CGAAGGTAGACAGGA                 GTTC GCA GAAC                 TTGGTGATTTCACAG  50 213
HR116_RS27955 6041976 .. 6041995 +   -15  -3.67597   GCGAGGATAAAAAAA            CGCCGACC CTAG GGTCGGCG             TTCTTGCATGGCGCG  85 78
        mexR 6048526 .. 6048557 + -19.6  -3.63805   CTTTTCGAAGCACAA      TGAAAAACGCCGGC GATC GCCGGCGTTTTTCG       TTTCAGGTATCCGCT 100 48
HR116_RS27995 NONE
HR116_RS28000 6053777 .. 6053788 +  -7.2  -2.72799   GCCCAGCAACTCTGG                GGCG ACTT CGCC                 TGATATCTCTCCCGC  52 11
HR116_RS28005 6055642 .. 6055659 +  -2.6  -3.14132   GGCACAGGCCAGGGT             CAGGGG AATCCG CACCTG              TTCGTAGCCCAGCAG  42 426
        gshB 6071439 .. 6071465 +    -5  -4.07687   GGCGAGCGACCGCGT         GTCCAAGGCGCG GAG TGCGTCATAGAC         TTTTCCGCCCCCCAT  63 92
HR116_RS28065 6072414 .. 6072428 +  -9.2  -3.89346   TGTCCAGCAAGTAGC               GCCGGC AAG GCTGGC               TTTCTCGCGTCCGAA  74 27
HR116_RS28070 NONE
        ruvX 6073469 .. 6073495 + -10.1  -3.60151   ACCCGGATTGACCCA         TGGCAGCCGGC ACGCC GCCGTTTGCCA         TTATGCTTTCGCCAC  70 30
        pyrR NONE
HR116_RS28085 NONE
HR116_RS28090 6076404 .. 6076421 + -14.1  -4.87626   TGCCACCACGAAAAA             GCCCGCC ATCC GGCGGGC              TTTTTCATCTTCGCG 100 45
        czcD 6081315 .. 6081327 +  -6.2  -3.65046   GATGATCCGCTCCAG                CGCC TGGTT GGCG                TTGTTCGCGTGCAGG  59 474
HR116_RS28125 NONE
HR116_RS28130 NONE
HR116_RS28135 NONE
HR116_RS28140 NONE
HR116_RS28145 6087947 .. 6087993 + -14.3  -2.62613   TCGCAGCGCGCCTGA CCCCGCTCCCA-CGGCGCGCGC CAGC GCGCTTGCCGCTGGGGGCGACG CTCTTTAGACTGGCG  74 26
HR116_RS28150 NONE
        metW NONE
HR116_RS28160 NONE
        rdgB 6090946 .. 6090986 + -18.2  -3.72576   CCTGGGCCTCTGAGC CGCAGCCGCCGGCGCCGCC CCCG GGCGGCGTCGGCA-CGGCG  TTTCGTCCGGCCGCC 100 28
        hemW NONE
HR116_RS28175 NONE
HR116_RS28180 6093008 .. 6093032 +  -4.1  -3.78934   GCGCGGCCCGACCTG          CACGCCGAAGT CGT ACATCGGCTCG          TTGTTGTCCAGCCCA  57 92
        mtgA 6097877 .. 6097889 +  -4.7  -2.57795   GGCTGCAACGCAGAT                GCCCG CTG CAGGC                TCAGTTGCTCCTCGG  42 310
HR116_RS28240 NONE
HR116_RS28245 NONE
        rsmD NONE
HR116_RS28255 NONE
HR116_RS28260 NONE
HR116_RS28265 6108215 .. 6108261 +  -6.3   -3.5393   CTTGGCGTTGACCAG GCAACGCTGGGC-GAAGGCGCG GTAG CGCGCCGCCAGCTCCGGGTCGC TTTCCAGCAGGTGCT  56 286
HR116_RS28275 6110308 .. 6110328 +  -9.6  -2.78547   GTTCGTGCGCTGAAC            CGGGGCGC GTGCG GCGCCCCC            TCATTCCTACGCTGC  57 28
HR116_RS28280 NONE
HR116_RS28285 6112597 .. 6112643 +  -2.9  -3.01712   CGCGCCGCGGCAGCC GGCCCGGCGCCATCAGACCTATG GGC TAAAGGCC-GATGGC-CCGTGCG TCTTGGCCGCACGGG  43 63
        coaD 6113247 .. 6113261 +  -5.6  -3.09492   ACTGCGGGCGCCGAT               GCGGCA CAA TTCCGC               TATTCCCGTTACCGA  49 82
HR116_RS28295 6113596 .. 6113613 +  -2.5  -4.26019   CTTCAGGGACGGTTC             GCGCCCC GTCC GACGCGC              TTTTGGCTATCCTTG  62 59
         ggt 6115882 .. 6115906 +  -4.2  -4.09685   ATCTCCCTGGGTCGC          AGCCTTGCAG AACCA CTGGAAGGCC          TTTTCCCGGCTGCCG  61 484
HR116_RS28330 6120330 .. 6120356 + -17.3  -2.79679   GAACGGCCCGCGTTC         GCGCAGCGGCG AATCC CGTCGCTGCGC         TATAATCGCGCTCTT  84 39
HR116_RS28335 6121595 .. 6121608 +  -5.2  -2.56596   GGCTGAGCCCGTCCC               GGCG GATGAG CGCC                TGCGTTCATCCGCCC  43 35
        ilvD 6123772 .. 6123790 +  -9.5   -4.8622   CCCGCGACGAAAAAA             GCCCGGT CCCGC GCCGGGC             TTTTTCATTCACGCG 100 46
HR116_RS28345 6125370 .. 6125399 + -17.1  -4.07687   GCCGGACACTGATAG       GCGCGGCGCCACC TCCG GGTGGCGTCGCGG        TTTTCGCCGAAGGGT 100 29
HR116_RS28350 6126296 .. 6126315 +  -9.2  -3.53012   CCAGTGCCAGGCCGG            CCTGGCGG CTGA CCACCAGG             TTTAGCCGGCCCGGC  64 343
HR116_RS28370 6130569 .. 6130583 +  -2.7  -4.90217   CTGGCAAGCCAGCAT               GAGCC GCCGG GGCGC               TTTTTGCTATGTTTG  74 519
HR116_RS28380 NONE
HR116_RS28385 6133453 .. 6133463 +  -2.4  -3.56704   ATCGCCCAAGAGGTA                 GGCC CAT GCCC                 TTCGTTTCCTACGCG  49 55
HR116_RS28390 6134725 .. 6134742 +    -7  -2.82015   GATTCTTCTTCAGCA             TCGCCA TCAGGT TGGCGA              TCTGGTCGATGTGGC  50 495
HR116_RS28410 6138252 .. 6138286 + -15.8  -2.71364   GATCGATTTCGCTCA    GGCGCTGGGCCTCGG CCATCT TCGAGGC-CAGCGCC     TGGTTGACCCGGTGC  75 505
HR116_RS28430 NONE
HR116_RS28435 6144302 .. 6144324 +  -8.3  -3.14132   CAGGTAAAGGTTCAT           CCACGGGCC TCCCT GGCTCGAGG           TTCGTCGCCCAGCAG  58 466
        rpiA 6148703 .. 6148713 +  -4.6  -2.87132   ACACTGCAACAAAAG                 CGGC TAC GCTG                 TGTCTCAGCAGACGG  46 77
HR116_RS28465 6149157 .. 6149176 +  -7.8  -3.30124   GCGGGCCTCAGGACA            GCCATTCG ATGG CGAACGGC             TTGTGCCGGATGCGC  58 76
HR116_RS28475 6152414 .. 6152458 +    -4  -3.87994   GTCGCGGACGAACAG GCGCTTGTCGCGCCCGGGGT CGTCC ACCACGTGCACGGCGAACGG TTTGTCCGCCTGGGT  57 332
HR116_RS28485 NONE
HR116_RS28490 NONE
HR116_RS28495 NONE
HR116_RS28500 6157295 .. 6157349 +  -6.1   -3.7175   CTTAAGAAATGATCG ACGCGGCGCTGGC-GGCCAGCTCGCG CCAG CGCTGGCCGGCCAGCCAGCTTGGCCA TTTCGATCCCTTTTT  60 29
HR116_RS28505 NONE
HR116_RS28510 6160192 .. 6160221 + -14.9  -3.75153   GGTCGGAACGCGAAA       CGGCCCACCTCCC GGAA GAGAGGCGGGCCG        TTTCGATTCAGGGCC  88 61
        serA 6165357 .. 6165401 + -21.8  -2.53263   TAAGGCAGCGTCCGG CGGAAA-GGAAAAAGGAGGCC CAGC GGCCTCCTTTTTTCGTTTCCG TCACTTGACGGTAAC 100 38
HR116_RS28545 6166925 .. 6166949 + -14.2  -2.90511   CCCGAACGGGGGAAG          CGGCCGCGCC CGAGA GACGCGGCCG          TCGTGTTTGTCGATG  77 48
HR116_RS28550 6167649 .. 6167663 + -12.8  -2.52464   GAGAATCGCCTGACC               GCGCCG CTG CGGCGC               TGAGTTCAGCCGCCG  67 8
HR116_RS28560 6169186 .. 6169203 +  -3.3  -2.73364   CGCAGCGCGCCGCCA             TGCTCGG GCAA CCAGGCA              TCGTTGAGGTAGAGA  40 228
HR116_RS28570 6170913 .. 6170951 +  -2.1  -2.62263   AGCTGAGCTTCGACC  AGCCCCAGGCG-CGCGGG CGCA CCAGCGGCGCCAGGAGAA   TCGTCTCGCCCAGCT  38 434
HR116_RS28580 NONE
HR116_RS28585 6173224 .. 6173241 +  -6.2  -3.01712   GAGAACAGCGGCAGC             CTGCCG AACAAC CGGCGG              TGTTCGCCCAGCCGC  49 488
  aac(6')-Il 6179407 .. 6179433 + -10.2  -3.65902   CTTCGTTACACCAAA         GCCATGGCAG AATGAGC TTGCCATGGC         TTTGGCTCCACTACG  70 85
HR116_RS28615 6179842 .. 6179873 + -10.8  -2.84276   ACGGCCCAACTTGTC      GCTCCAGCGGACGGC TTC GCCGCCCACTG-AGC      TAATTCGTTAGGCAT  64 91
   aac(3)-Id 6180386 .. 6180436 + -14.1  -3.60792   ATGCCTAACAAGGCA CTCCAGCCGACGGCTTTGCCTTCGC TGC GCTACGGCAAATCCG-CGGCTG-AG TTTGGGCGTTGAACG  81 33
HR116_RS28675 6190037 .. 6190081 +  -8.3  -3.08133   ATCGAGGAACGCGGG GCCTTCTTCCTGGCGTTCATC ATC GACGGCCGCCAGGGCGTCGGC TTCGCTCAATGCGTC  56 218
HR116_RS28695 6193139 .. 6193155 +  -3.5   -3.9243   TTTTGGCTCCCCTCG              CTGGCGC TCG GCGCCCC              TTATTTCAAACGTTA  56 100
HR116_RS28700 6193988 .. 6194011 +   -16  -3.06133   TAACAATTCGTTCAA          GCCGACCGCGC TAC GCGCGG-CGGC          TTAACTCCGGCGTTG  84 45
HR116_RS28705 6195539 .. 6195549 +  -8.2  -3.65902   GCAGCCGACCCAAAA                 CCGC TAC GCGG                 TTTCGGTCGGCTGAG  65 75
HR116_RS28710 6196014 .. 6196031 +  -4.7  -3.07233   AAGTCGCTGCGGAGG             CCGACGC CATG GTGACGG              TGTTCGGCATTCTGA  47 11
        folP 6197103 .. 6197134 +  -7.2  -2.87344   AGTCAGCAGACAAGT      AAGCCGCAACATCA GAAT TGTTGTTGCGGCGC       TCTGTAAGACCAATC  53 135
HR116_RS28720 6198484 .. 6198515 +  -8.8  -3.80893   TCGAAACCTCGTGAA      TG-GCGGTATCCTGT CTG GCAAGATACCGCTCA      TTTCCCTTGTCCCGT  69 85
      tet(G) 6200520 .. 6200536 +    -3  -3.78953   TACTACGCAGACCAT              TCGCAA CTTCA TTGTGA              TTTAGTCATGGCGAT  54 9
HR116_RS28740 6201464 .. 6201487 +  -8.8  -3.61398   TTGCACTGGCGGCGC          GCGCGCTGCG GGCC TGTAGTGCGC           TTCTTCCCGCGCGCC  65 141
        sul1 NONE
HR116_RS28765 6205595 .. 6205607 + -10.5  -4.10657   GTCATCGCCGCCGAC                GCCCG TGC CGGGC                TTTTCGGGCCTGTCA  81 187
HR116_RS28775 6207101 .. 6207129 + -11.6  -3.16668   ACGCCGAGTCTCGCC        CCAGCGGCGCCA GCGCA TGGCGCAGCAGG        TTCATGCCGCTGTTG  70 422
HR116_RS28805 6212567 .. 6212581 + -12.8   -3.3782   GCTGGAAAGAAAAAA               CGCCCC GGC GGGGCG               TTCCTTCACTGGCTC  74 148
HR116_RS28855 6224228 .. 6224286 +  -7.9  -3.61764   CCGGTAGGCCGGGCA CCCCTGCCCTGCCTGCCGGCCGCGA-GG CACG CCGTTGCGGCGCGCCGGTACGGCAACGG TTTAGACCTTGCTGC  62 49
        glnA 6229559 .. 6229576 + -12.7  -5.24129   GAGTCACCCTCTTGA             GGCCTCC TTCG GGAGGCC              TTTTTTATGGGCCGG 100 62
HR116_RS28875 6230105 .. 6230118 +  -3.8  -3.66178   GGCGTGCCCTGCTCG               TCCG GTTCCG CGGA                TTTCGCCTTGGGCGC  54 56
HR116_RS28885 NONE
HR116_RS28890 6233687 .. 6233699 +  -3.3  -5.41143   CCACTCCGCCGTGGG                CGGGA TTT TCCGG                TTTTTTTCCCGACTC  91 56
        glnL NONE
        ntrC 6236465 .. 6236482 + -14.1  -4.77438   CCATGAGCGACCCAA             CGGGGCC TTCG GGCCCCG              TTTTTCATGGTCCGT 100 54
        trmL 6238199 .. 6238215 + -10.8  -3.62775   GACAGGCATGAAAAA              GCCCGC GCAAG GCGGGC              TTCTTCGCAAGTGCT  73 48
HR116_RS28930 6241336 .. 6241367 + -19.6  -3.29144   ACGAACTCCCGCGCA      G-GGCGGATAACCGC GTC GCGGTTATCCGCCGC      TTCTGCAGGCCATCG  95 51
HR116_RS28935 6242504 .. 6242529 + -10.3  -5.75342   TGAAATACGTGGAAG         CGCCCCACAGC GCGC GGTGCGGGGCG          TTTTTTTTAACGGCG 100 87
HR116_RS28940 NONE
HR116_RS28945 NONE
HR116_RS28950 6246026 .. 6246039 +  -6.7  -3.14132   CGGCAGCGGTTAAGG               TGACG TCCT CGTCA                TTCCTGCACGGACGC  53 61
HR116_RS28955 6247595 .. 6247612 + -11.3  -3.15249   GAGGTAGTTGGCGAC             GGCTTCG TCGA CGAAGCC              TTCCTGGCGCATCTG  67 80
HR116_RS29000 6253862 .. 6253901 +  -7.8  -3.12521   CCGCTGGACAGCCTC  TGAT-ATGCTCGGTGGCGG TCC CCGCCACGGAGCTTCGCCA  TGTCCTTTTCCTCCG  56 23
HR116_RS29005 NONE
HR116_RS29010 NONE
HR116_RS29015 NONE
        mutY NONE
HR116_RS29025 NONE
HR116_RS29030 NONE
HR116_RS29035 6260321 .. 6260341 +  -3.9  -3.78953   CGCTCCAGTGGTACA            GTTTCGGTA CAG TGCCGGCAC            TTTGCTACTGGAGAT  56 81
HR116_RS29040 NONE
HR116_RS29045 6263760 .. 6263778 +  -6.6  -2.62396   CGGAAAAGCGCGCCG             GCGGCGCT CCG AGCCTCGC             TCCTGTGCCGAGCTC  48 320
HR116_RS29070 6270081 .. 6270100 +  -3.5  -3.54488   CATCTAACTATCGGC            CAGATGG GGCCAG CCAACTG             TATTCTTTACAACGC  51 60
HR116_RS29075 6271433 .. 6271444 +  -4.4  -2.57344   AGGGATCGGATGGTA                CCAA GGGT TTGG                 GTTCTGACACGCATC  41 7
HR116_RS29080 NONE
HR116_RS29085 6273596 .. 6273609 +  -2.3  -3.22476   ACTGTAATGTACCGT               GACTC GCTG GAGCC                TTACTGGTACCTGGT  43 180
HR116_RS29090 6273705 .. 6273724 + -11.4  -4.98531   TGAATACGACGAAAA            GGCTCACC TCCG GGTGGGCC             TTTTTGCTTTCCGCC 100 34
HR116_RS29100 6275519 .. 6275529 +  -3.2  -3.17075   GGCTCCGGTTGAAGC                 GCTG TGC TAGC                 TTGCCTTCGCCAGGA  44 213
HR116_RS29105 NONE
HR116_RS29110 6277121 .. 6277172 + -13.8  -2.62292   TTCAGCATCTATTGA TGCC--AAGCCAGGCCACCGCCGGG CGCGT CCCGGCGGTGGCC-GCCTTCAGGCC TGACTTCTCATGATT  71 26
HR116_RS29115 NONE
HR116_RS29120 6278588 .. 6278612 + -17.1  -4.11216   GCTTTCCGATGCCTG          CGGGGCGGCTA TAA TCGCCGCCCCG          TTTTCCCGCTGCCGC 100 47
HR116_RS29125 6280155 .. 6280167 +  -4.1  -4.63486   GTATGACGTTCGAAG                GAACG GAT TGTTC                TTTTATTGCAACGGT  72 325
HR116_RS29130 NONE
HR116_RS29135 NONE
HR116_RS29140 NONE
HR116_RS29145 NONE
HR116_RS29150 6285329 .. 6285356 +  -4.3  -4.19336   CAAAAGGTAATTTCT        GAGTAACATAGA AGTAA TCTG-GTTACTC        TTTCTTGAAGTGATT  63 255
HR116_RS29155 NONE
HR116_RS29160 6286933 .. 6286949 + -11.5  -4.27316   TCCAGCCGTGAAAAA              GCCGCTC ACT GGGCGGC              TTTTCCGTTGCGGCG  89 30
HR116_RS29175 6290736 .. 6290748 +  -3.3  -2.59431   TCACTGGCGGCGCCG                GCCAG GTC CTCGC                TGAGTTCTGACCCCC  39 3
HR116_RS29180 NONE
HR116_RS29185 6292556 .. 6292568 +  -3.3  -3.09015   GCTCGGGGCTGATCA                GCAGG TTT CCTCC                TTGCCTGGCTGTGAC  43 67
HR116_RS29190 NONE
HR116_RS29195 NONE
HR116_RS29200 NONE
HR116_RS29205 NONE
HR116_RS29210 NONE
HR116_RS29215 NONE
HR116_RS29220 6296024 .. 6296041 +  -3.3   -2.5805   CGAGCTCTTGCAGCA             CCTGGTC AGCT GACCGCG              CTTGTAGCGCCTCCT  39 13
HR116_RS29225 NONE
HR116_RS29230 NONE
HR116_RS29235 NONE
HR116_RS29240 NONE
HR116_RS29245 NONE
HR116_RS29250 6301130 .. 6301153 +  -2.2  -2.79183   TTTCTGGCCCCGTCG          CCGCGCGCGC GGCA GCCTGTGCAG           TGTCATCCACCTGCA  39 79
HR116_RS29255 NONE
HR116_RS29260 NONE
HR116_RS29265 6303315 .. 6303344 +  -2.8  -3.67611   GAAGCGTCCCTCGTC      GCGTAGAGG-ACGC CATG GCGGACCTC-GCGC       TTGTATTCCACTGGG  51 20
HR116_RS29270 NONE
HR116_RS29275 NONE
HR116_RS29280 NONE
HR116_RS29285 6307738 .. 6307756 +  -7.3  -3.16475   ACACGAACATAAAAA             AGGCGCC ACCAA GGCGCCC             TTCAGTATGTAACTA  56 29
HR116_RS29315 NONE
HR116_RS29320 NONE
HR116_RS29325 NONE
HR116_RS29330 6312321 .. 6312334 +  -8.1  -3.55622   CAACCGACGCCCAGC               CCCAC TGCC GTGGG                TTTGGGGAAGTTGCA  65 42
HR116_RS29335 NONE
HR116_RS29340 6315319 .. 6315333 +  -7.1  -2.62184   CGAAGACCGTCCGTT               GCTGG CTGTT CCAGC               TCGTCTGACAACCCC  48 3
HR116_RS29345 NONE
HR116_RS29350 NONE
HR116_RS29355 6316178 .. 6316188 +  -4.6  -2.86164   CCAAGAAAGCCCAGG                 GCGG ACG TCGC                 TATGCTCGTTAAACG  46 3
HR116_RS29360 NONE
HR116_RS29365 NONE
HR116_RS29370 NONE
HR116_RS29375 6319717 .. 6319747 + -17.7  -4.51097   CGGCACCATGAATCC       CGAAAAGCCCCGC CTCGC GCGGGGCTTTTTG       TTTTATCCTGCTTCC 100 196
        rfbB NONE
        rfbD NONE
        rfbA NONE
        rfbC NONE
HR116_RS29400 NONE
HR116_RS29405 6326803 .. 6326818 +    -9  -3.14132   GTTCGGCCACGCCGA              GAGGAC ACCC GTCCTC               TTCATAAAAGACAGA  61 215
HR116_RS29410 NONE
HR116_RS29415 NONE
HR116_RS29420 6330081 .. 6330111 + -16.3  -4.59982   ACCCTGAAGCCCAAA      TGAAG-AGCCCGGC GAAC GCCGGGCTTCTTCA       TTTCTTTCCTTGTGC 100 325
        arcD NONE
        arcA NONE
HR116_RS29435 NONE
        arcC 6335400 .. 6335416 + -15.1  -3.86981   GATACACCACCCACA              GGGCCGC TTC GCGGCCC              TTCTTCATTCTCCTC  91 39
HR116_RS29445 6337726 .. 6337744 + -13.1  -4.56914   CGCCACAACGGAAAA             GGCCCGG CTAGA CCGGGCC             TTTTCGTTTCAGTGC 100 45
        yrfG 6341497 .. 6341514 +  -3.3  -4.16842   TTCGGCCTTGGCGAT             GGCG-CTC AGG GTGTCGCC             TTTCTTCACGGTGAC  63 197
HR116_RS29480 6342954 .. 6342966 +  -4.7  -2.52676   CACACCTAGAACGAT                AGGGC CCA GCCCA                TGCCTTGCCAGCCTG  43 110
        fdhD NONE
HR116_RS29490 6346148 .. 6346174 + -23.8  -3.01791   GAAGCCCACGAAAAA         CGCCGCCTCCTG CAA CAGGAGGCGGCG         TCTTAAGGAAAAAGT 100 39
HR116_RS29495 6346984 .. 6347005 + -15.1  -3.85698   TCCCTACGACGCAAA           GGCCGGGCC GGAT GGTCCGGCC            TTTGTGCGAACGACC  91 50
HR116_RS29500 6347491 .. 6347520 + -20.9  -3.93236   TGCCGAAGCTGATGT       GTAAAAGCCCCGC GAAC GCGGGGCTTTTAC        TTTCTACCGTTCGTC 100 51
HR116_RS29510 6348988 .. 6349033 +  -5.1  -3.61398   AGGGATTCAGTATGC CGCGCGATAGATCGCCAGGGC ATCC GCCTCGCCGACCTCGCGCGGG TTGTTAACCAGCAGA  55 482
HR116_RS29535 6354292 .. 6354329 +  -2.5  -2.60032   AATGACCAGTTCTTC   CCGCGGCAGCTT-GCCGC TGC GCGGCCAGGGTTCAACGG   CCTTTTTCCCGACCG  38 70
HR116_RS29545 6355493 .. 6355506 +  -9.5   -5.1861   TCGCCCATGAAAAAA               CCGCC CGAA GGCGG                TTTTTTCATGGTGCC 100 44
HR116_RS29560 6359005 .. 6359031 + -14.5  -2.62463   TCGGCCTGAGGCCAT        C-CCGGTCTCCC CTGC GGGAGACCGGCG         CTTCTCAGTCCTGGC  74 32
HR116_RS29570 6360060 .. 6360070 +  -2.4  -3.57561   CATCAACCTGCTCGA                 CGGG AGT CCGG                 TTTGAGCCATTCGCC  49 10
        rimK NONE
HR116_RS29580 6362450 .. 6362462 +  -4.7  -3.28924   GAGGCCGGTGCCCTT                GCCGC CAC GCGCC                TTGTCGCCGCGGATG  49 249
HR116_RS29595 NONE
HR116_RS29600 NONE
        gshA 6369175 .. 6369228 + -12.1  -2.53822   TCGGCCTGATCAGCA ACTGAGCGAAGCCGGCGCGCCCCTG CGCC CAGGGACGCGCCGGCGGATCACAGG CTCTTCTCGAATACC  65 21
HR116_RS29615 6371583 .. 6371593 +  -6.8  -3.05384   AGCCGGCGCAGCACG                 CCGA CCA TCGG                 TTCGATACGCGCCAG  51 50
HR116_RS29635 NONE
HR116_RS29640 NONE
HR116_RS29645 NONE
HR116_RS29650 6379430 .. 6379443 +  -5.9  -3.40403   CCAGGGTATGCGGCG               CCCGT TTCA GCGGG                TTGTCCTCCGCCGGC  55 245
HR116_RS29685 NONE
HR116_RS29690 6390229 .. 6390262 +  -8.8  -3.03159   CAGCGGGATGCACAG     GCGCC-GGTCGGCAT GCAGG ATGGCGCCCAGGCGC     TGTTCGAAGGCTTCG  55 473
HR116_RS29720 NONE
HR116_RS29725 NONE
        ssrS NONE
HR116_RS29735 6396369 .. 6396389 +  -2.6  -4.07885   CTTGCGCTTCATCGA            TTGCCT CCCCCTTCC AGGCAA            TTTTCGAGGCCGGTC  57 211
HR116_RS29740 6397212 .. 6397244 +  -3.3  -3.01712   GCACCAGTTCCGGCA      TGCTTTCCCGTGGCG TGG TGCCGCCCGAAAGAA      TGTTCAGCGGCAGCA  42 229
HR116_RS29765 6403830 .. 6403858 + -17.5  -3.90922   ATGTTTTTCCCCTAT        GAAGGCCCCGGTT TCC GACCGGGGCTTTC        TTATTTCCGACCAAT 100 131
        glpT 6405327 .. 6405355 + -17.4  -3.05384   GCCGGCTGATGACGC        GGCGGCTCCGGC GCCAG GCCGGAGCCGCG        TTCAGTCCCGCGGCG  88 32
         ppx 6413564 .. 6413579 +    -9  -3.36327   ACCGTCGGCCTGCAA              CACCCA GGCC TGGGTG               TTGTCGGTCAGGTAC  63 126
HR116_RS29815 6417594 .. 6417619 + -13.9  -2.90392   GTACCCTCCGCTCCG         GCTGGCCGCCG GGGC CGGCGGCTCGC          TATGCTTGCGCGATA  74 93
        elbB 6418374 .. 6418393 + -11.4  -4.14739   ATCGGCCAAGCACGA            GGGCGGTCG CGC CG-CCGCCC            TTTTCAAATCCGTGC  84 40
HR116_RS29825 6419418 .. 6419444 + -18.1  -2.70932   CTTCCGTAGAAATGA         CGACGGCCAGT ATCGC ACTGGCCGTCG         TGGTTGCGCGAACCC  86 515
HR116_RS29860 6426365 .. 6426409 +  -6.3  -4.07687   TGGCCGCCGGTTTCG CCGCAGGCTTCGCAGCTGGC TTGGCT GCGGGCTTCGCGGC-TGCGG TTTTCGCCGCGGGCT  66 279
HR116_RS29870 6427932 .. 6427959 +  -9.9  -3.73224   GCTAAAATGCAAAAA        TGGCGC-TCTCC CGCAT GGAGACGCGCCG        TTTCGTAACGACTCG  74 36
        argH NONE
HR116_RS29955 NONE
HR116_RS29960 NONE
HR116_RS29965 6448399 .. 6448419 +  -8.2  -3.12351   CAATGGCATGACCGG            AGCCAGGC ACGGC GCCTGGCC            TTGCCTGTGCCCGGA  58 133
HR116_RS30050 NONE
HR116_RS30055 NONE
HR116_RS30060 6463174 .. 6463194 +  -8.2  -3.12351   CAATGGCATGACCGG            AGCCAGGC ACGGC GCCTGGCC            TTGCCTGTGCCCGGA  58 133
HR116_RS30065 NONE
HR116_RS30070 6466880 .. 6466895 +  -7.5  -2.79248   TCAGCGCGCGTAGTC              GCCGG CGGCTT CCGGC               TGGTATTCGATTTCC  52 84
HR116_RS30090 NONE
        lysA 6469576 .. 6469631 +  -4.1  -3.23216   AAGCCTGCTGCCGCA GT-GAGGCCCAGACCATGC-TTTTG CGCTTCAC CAAGATGCATGGCCTGGGCAACGAC TTCATGGTCCTCGAC  47 22
        dapF NONE
HR116_RS30105 NONE
        xerC NONE
HR116_RS30115 6472996 .. 6473013 +    -4  -4.07568   GCCAACAGGAAGTAG             CCCGCG CTGGCC CGCGGC              TTTTCCGCACCGGCC  61 243
HR116_RS30125 6475568 .. 6475594 +  -2.2  -4.38154   CGAGCAGGATCACCA        TCGCGGCCAGG ACCGAG CCGGGC-GTGA         TTTTCTCGGCGGTCT  65 76
HR116_RS30155 6480619 .. 6480643 + -12.8  -2.53263   CCCTCAACCTCGCCC          CCGCCGACCT ACCCA AGGACGGCGG          TCGCTTCGACCTGGC  67 277
HR116_RS30185 6486675 .. 6486696 +  -7.3  -4.15106   TCGTTGCAGGCGCTT           GGTCATCAT GAAC AGGATGACC            TTTTCACCCTTGCTA  67 519
HR116_RS30250 6504516 .. 6504536 +  -4.7  -3.90112   TGGGGCTGAGGCCAG           CGCT-GCC AAGCGC GGCTAGCG            TTTAATTCGCAGCAC  60 32
HR116_RS30255 6506288 .. 6506301 +  -3.8   -3.6944   CAGATCTACTTCTCA               GCTC GTATAA GAGC                TATTTCTATTAAAGG  56 46
HR116_RS30260 NONE
HR116_RS30265 NONE
HR116_RS30270 6512718 .. 6512731 +  -5.2  -3.01791   CACGATGGTCATACA               GCCC CAGATC GGGC                TGTTGGGCAGCCCCT  47 361
HR116_RS30280 NONE
HR116_RS30285 6514885 .. 6514902 +  -4.8  -3.07043   CCCCGTCGGTGGACT             GGCTAC ATCTGC GTGGCC              TGTTGGCATCCTCCA  47 187
        betT 6523775 .. 6523805 + -16.1  -2.77043   TGGTGCGCTGAGGGA      TGCG-GGGGCCGGC CAAT GCCGGCCCCTCGCC       GTTTCGCCTACTGGA  81 30
HR116_RS30330 6527894 .. 6527910 +  -5.7  -3.08798   CGAACTCGAGCCAGC              GCGCGTC GAC GCCGTGC              TCTTCGATCAACCGT  49 374
         rep 6531367 .. 6531401 + -12.8  -4.11216   TCGATTTTCACAAAA     GTGTCTTGCCCGATGC CTA GCCTCGGGCGAGGAAC     TTTTGCCGCTCCACG  89 62
HR116_RS30345 6533198 .. 6533234 + -10.8  -3.14931   GCCGGCAGCGGCGCG   GCC-CGCCTGCCACGGGG CCG CGCCG-GGCAGGCGCGGA   TTCCTGACCGCTCGA  67 41
HR116_RS30350 6533935 .. 6533982 +  -5.5  -3.14132   CGCCACTCAGCCCCG CTCTTCCTG-GCTGGCTCGCAGG CCGG CCAGC-AGCAAGCGCTGGTAGAG TTCCTCGCGAAGCCC  51 42
HR116_RS30400 6544293 .. 6544308 +  -6.1  -4.52857   AGGACTCCCGGCATA              GACGG GAAACA CCGTC               TTTTCTGTACACGAT  74 67
HR116_RS30405 6545821 .. 6545852 + -12.3  -3.53224   GGAAAACTCCTAGAA      TTCGCACGACCGG GATGAG CCGGTCGTTCGAG       TTTCCACGGGAGATA  74 97
HR116_RS30410 6547625 .. 6547641 +  -2.1  -2.64616   GCGCGACATGGGCAT              TGGCCCG GAC CAGGGCA              TCGTCTCGGTAGCGC  38 226
HR116_RS30425 NONE
HR116_RS30430 6552258 .. 6552275 + -14.1  -5.24129   ATGCTTGTTACCCTT             GCCCGCC ACCT GGCGGGC              TTTTTTGTGCGCGGC 100 59
HR116_RS30445 NONE
HR116_RS30450 6555427 .. 6555437 +  -2.4   -2.8474   GACTCGGACGGGCGT                 CGCC GGA GGGG                 TGGTTATGGGTCAGG  40 182
       coaBC NONE
         dut NONE
HR116_RS30470 NONE
        argB 6561343 .. 6561374 +   -23  -3.22091   GCGTCACTGATCCGC      CCGCCACGGCGCGC TCCG GCGCGCCATGGCGG       TTCCTCCATTAGCGT 100 31
HR116_RS30485 6564008 .. 6564022 + -11.4  -3.08679   CCAGCGCCGGGATCT               GCACCG CGC CGGTGC               TCTTGAGTACCGGCG  66 404
HR116_RS30505 6567498 .. 6567512 +  -2.7  -4.33105   TGGAAACGCCCGATC               TCGCC CTGCA GGCGC               TTTTCCTCCTGCTTG  66 99
HR116_RS30520 6569564 .. 6569581 + -14.1  -4.66938   GTCAGACATGAAAAA             GCCGGCG CATG CGCCGGC              TTTTCTATTCCACGT 100 46
HR116_RS30535 6571788 .. 6571803 + -11.8  -2.54325   ACATCGAATGACCGG              CGGGCG CCTC CGCCCG               ATCTCTTTCCAACCC  65 30
         gmk 6572496 .. 6572521 +  -6.7   -4.4078   TTTTTAGACTATTCA         GTCCGCCCGGC AAAC GTCGGGCTCAC          TTTTCGTTACGAGGA  76 68
        rpoZ NONE
        spoT NONE
HR116_RS30555 NONE
HR116_RS30560 6576507 .. 6576542 +  -4.4  -3.60805   GCAGCCCGCGCAGAT    AGCCGCCGCGGGACGG GACG TCGCGCTGCGCCGGCA     TTTCCAGTCGCCTCT  52 325
HR116_RS30580 NONE
        recG 6581683 .. 6581696 +  -3.1   -3.4404   CACGGCCAGCAATAC               GGTCA AGTG TGATC                TATTTCGCTCTCGCT  49 14
HR116_RS30590 6583258 .. 6583273 + -11.8  -4.30719   CGGATGAGATCGAAA              GCCGCC CTCA GGCGGC               TTTCTTCTCCGGAGC  91 90
        glcC 6591330 .. 6591369 +  -3.4  -2.82834   GCGTCGCAGACCGGC  CGCCGGCCGAACGT-GCTA CCC TCGCCGCCTTCTGCCGCCG  TCTCGTAGTCCCGTC  42 50
HR116_RS30645 NONE
        ubiA 6593158 .. 6593175 + -12.7  -3.72576   GCACGCCGTCCTTTT             CGGTGGC CGGC GCCACCG              TTTCCTGGGCCAGCG  77 345
        phoB 6594115 .. 6594143 + -13.7  -3.60098   ACCAAGAGCTGACCC        CGCTCCCGGCCGC CCA GCGGCCGGAGTCG        TTTCCCCTGGACGGT  81 29
        phoR 6595577 .. 6595595 +    -3  -3.10597   GCAAGCGACGACACA             GCCCCTCA TTC TTAAGGGC             CTTTTGGCTACCGCA  43 87
HR116_RS30670 6596965 .. 6596985 + -19.7  -2.74784   CTCGACTGAGACGAG            CCGGCGCCG CCA CGGCGCCGG            TGACTTTTCAAGGCT  90 32
HR116_RS30740 6613963 .. 6613992 + -20.1  -3.61764   CGCCGGGGCTAGACG       CAGGAACGCCGGC TATC GCCGGCGTTCTTG        TTTGCGCGTTCCTCA 100 29
HR116_RS30760 6619879 .. 6619899 + -19.7  -4.77173   ATCAGGTGCGTACTT            GGCCCGGCG TTT CGCCGGGCC            TTTCTTTTCTGCCAC 100 69
HR116_RS30780 6625014 .. 6625033 + -10.6  -3.28712   GTCGTTACCTTTGTC            GCCACGGC CGCT GCCGCGGC             TTCTCGCCGGGGGCC  66 145
HR116_RS30785 6626425 .. 6626461 + -21.6  -3.28712   CGGATCTGACGGCGC   GTCCCTGCCCGC-CCCG TCCA CGGGAGCGGGCAGGGCC    TTGTCAGCCCCGCGG 100 32
HR116_RS30800 NONE
HR116_RS30830 6634844 .. 6634870 +  -6.5  -2.75064   GCAGGCCGGGATAGG         CCGATAGCGGC GTGAA GCGGATATCGG         TACTTCGCTCCACCG  49 212
HR116_RS30860 6640767 .. 6640778 +  -5.8  -4.07885   TTGACGCTTTCGGCA                CGAC CCTG GTCG                 TTTTCGGGCCGGGTC  65 141
HR116_RS30865 6641874 .. 6641897 + -10.2  -3.05463   CCACTCCCGACTCGT          CGCCTCTCCC TCCA GGGAGGGGCA           TTGCATCGCACCCAT  62 49
HR116_RS30870 NONE
        dgcA NONE
        dgcB NONE
HR116_RS30885 NONE
HR116_RS30890 6648864 .. 6648880 +  -4.5  -4.23647   CGTGGTGACGATAAA              TTATTGT ATT ACGATAA              TTTATTCCCTAGTTT  63 82
HR116_RS30895 NONE
HR116_RS30900 NONE
HR116_RS30905 NONE
HR116_RS30910 6650374 .. 6650386 +  -4.8  -3.68351   CCCCGGGCACTACTC                GCTG GGCGG CAGC                TTTCACTGGTGAAGC  58 1
HR116_RS30915 NONE
HR116_RS30920 6651136 .. 6651162 +   -10  -3.72695   AGGCATTGCCGTTGT         CGTCCTGGCGCC ACA GGCACCAGCGCG         TTTCCTCCGCCGGCT  70 147
        gbcB 6655093 .. 6655118 +  -2.5  -3.78953   GTCGAGCAGCAGCAG         GCGCCACTGG TCCCGTT CCAG-GTCGC         TTTCCTCGTAGCGCT  54 277
HR116_RS30960 NONE
HR116_RS30965 NONE
HR116_RS30970 NONE
HR116_RS30975 6666677 .. 6666710 +    -3  -3.01712   CGGCAGAACGTGGAT     TGACCGGAGAG-GGA TGCGC TCCTCTCCCCGGCCC     TCTTCCCGAAGGGAG  43 23
HR116_RS30980 NONE
HR116_RS30985 6668467 .. 6668489 +  -7.6  -3.85698   TTTCCAGTGCAAAGC           CGCGCGGC CGTGGAC GCCGCGCA           TTTGTACCCACAACG  68 177
        fdhA 6669737 .. 6669760 + -19.6  -2.72991   ACCTCCGGCAACAAC          CGACGCGGCC CACG GGCCGCGTCG           TCGTTGGCGCTATCC  90 41
HR116_RS30995 6670862 .. 6670893 + -10.8  -2.78547   CCACCTTCACCCGCG      CCTTGTCGATGGCG TAGG CGGCATCGGCCAGG       TCATTGCTCACCTGC  60 126
        adhP 6674784 .. 6674805 + -15.1  -3.16971   GAGATGTGACCTGCG           GGGCGGCGT CCCG GCGCCGCCC            TTGCCTGTCTACTCG  83 32
        aspA 6677541 .. 6677570 +  -9.3  -5.41143   CCCTCTCTACACTCT       GA-GGGACACGGCG ACC TGCGGTGTCCCTTC       TTTTTTTCACCGCTC 100 244
HR116_RS31045 NONE
HR116_RS31050 6681958 .. 6681968 +  -2.4  -3.01712   CGGTGGGACGAAGGT                 CAGC AAC GCGG                 TCTTGAAGCGCCCGA  41 311
HR116_RS31070 6687854 .. 6687889 + -15.4  -3.08015   TCTTCATCACCTTCG    GCGACAGGCGCAGGCT GCGC AGGCTGCGCTTGACGC     TCTTGAGGTGGTTGA  78 345
HR116_RS31085 6690269 .. 6690305 +  -6.5  -2.70932   GATCCGGCTCAGGAT   CGCCCGGCGCGCG-CTC GGCTA GAGTCGCGCGCCCA-CG   TCGTTGCGAGCCCGA  49 51
HR116_RS31090 6691740 .. 6691760 + -11.1  -4.12188   AGCAGGAACACCACG            TAGCCCCTG AAC CAGGGGCTC            TTTTCCAGGTAGTCG  81 47
        uvrD NONE
HR116_RS31115 6700389 .. 6700400 +  -2.2  -3.25823   ATAAGCCCGCTGAAT                GG-CG CTT CGACC                TTGGTATAAAGGCGA  45 37
HR116_RS31120 6701964 .. 6701991 +  -2.6  -3.34398   GACACATGCTGGCCG        GCTGAGGCTGAA CCGT TTCATCCGCAAC         TATTTCCAGCGCCCG  45 21
HR116_RS31125 6702592 .. 6702623 +  -7.4  -2.87132   CAGCCTGAACTGTAC     CGT-A-GGCCGCTC CTTACC GAGCGGCCTTCACG      TATCTGGAAGAAGCC  53 68
HR116_RS31175 NONE
HR116_RS31180 NONE
HR116_RS31185 NONE
HR116_RS31190 NONE
HR116_RS31195 6717806 .. 6717864 +  -3.8  -2.72344   CCACCGGAACAGTTC CGCTACAGCCGGGCGGAACAGTTGCCGG GGCCA CCG--AACTGTTCCGTCCAACTCCCGCG TGGTTGCCCCTGAGC  42 43
HR116_RS31200 6718197 .. 6718238 + -12.4  -2.60075   CACAGTTGGTTAGTC TCAGCGTTGACACGGCCGCG CGGA TGCGGCCG--TCTACGCTGA CTTCGTTCGGAGCAA  65 59
HR116_RS31205 6718671 .. 6718684 +  -3.1  -3.01712   TCCGTTAGCCTTGGC               GG-CTG TTC CAGTCC               TATTCCGCCCAACCC  43 120
HR116_RS31210 NONE
HR116_RS31215 NONE
HR116_RS31220 6721361 .. 6721385 +  -3.6  -3.63515   GCTCTTTCAGCGCCT         CGCAGA-CG GCGGATAA CGCTCTGCG          TTATTCGCCCTACAG  51 73
HR116_RS31230 NONE
HR116_RS31235 6723459 .. 6723478 +  -3.4  -3.02144   TGACCGCACGCCGCA            CGCCGCAC GCCC GTCCGCCG             TCTTCCCCGGAGTGA  43 273
HR116_RS31240 NONE
HR116_RS31245 6725717 .. 6725745 +   -16  -4.18934   GCCTGGTCCGCGAGG        CGCCGGGCGATC AGCAG GATCGCCAGGCG        TTTGTTGGCGTGCTG  95 155
HR116_RS31265 6730621 .. 6730648 +  -3.4  -3.29854   GACATTAGCCGTTCT        GCGGGTAGGTTCG TCA TGAAGC-ATCCGC        TATTCTCGGTATTTT  46 33
HR116_RS31270 6732413 .. 6732423 +  -4.6  -3.43071   AGTTGATCGAGCAGC                 GCCG GGC TGGC                 TTCCTTGATCTCGCC  51 383
HR116_RS31285 NONE
        algB NONE
HR116_RS31315 6743201 .. 6743231 +   -14  -2.69871   GGGCGGCGGTTTCCA       GGTCCGGCTCGC CATCGAA GCGAGCCGGACG       GTATTTCATCTGGAA  69 101
HR116_RS31355 6750280 .. 6750302 +  -7.7  -3.19659   ACTGCAAAGGAGCAT           CGAAGGGCT CAAGA AGCCATTCG           TGTGTTCTGACTGTC  56 143
HR116_RS31365 6753564 .. 6753575 +  -2.2  -3.02144   CCTGGCGAGGCCGCG                CTGA CATG TCGG                 TGTTCACCCCACTCG  41 54
HR116_RS31370 6754645 .. 6754661 + -13.7  -2.75481   CAGCCCACCCCCGGC              CCGGCCA TCC TGGCCGG              TCGTTCGCATTGAAA  72 151
HR116_RS31390 NONE
        znuC NONE
        znuB NONE
HR116_RS31405 NONE
HR116_RS31410 NONE
HR116_RS31415 NONE
HR116_RS31420 6764633 .. 6764651 +   -16  -5.00138   CCGCCCCTGGAAAAA             GCCCGGTC TTC GACCGGGC             TTTTTCGTTTCCGTC 100 55
HR116_RS31425 NONE
HR116_RS31430 NONE
HR116_RS31435 NONE
HR116_RS31440 NONE
HR116_RS31445 6769885 .. 6769909 +  -5.5  -4.44548   GCCGACGAAATCGCT          GCGGCTGAGGC CAT GCCGCAGCATC          TTTTCGTTGAGTGTC  74 74
HR116_RS31460 NONE
HR116_RS31465 6775023 .. 6775057 +  -7.7  -3.40522   GCCACTGACCACGGT    GGTCACGGGCCAGGCG CAGG CGCC-GGCGCGCGACA     TTCTCGTCGAGCAGT  59 268
        pdxY 6776492 .. 6776504 +  -9.1  -3.75024   CCATTTCGGCCAGAC                CAGCG TCG CGCTG                TTCTTCATGGTCACC  71 319
HR116_RS31500 NONE
HR116_RS31520 NONE
HR116_RS31525 6787141 .. 6787152 +  -7.2  -3.85698   GAGGGAAATTCCTTA                GCGC AGCG GCGC                 TTTGTCGGAGACGAA  68 348
HR116_RS31545 6790945 .. 6790956 +  -7.2  -3.34962   TGCCCTGAAGGATCG                GCGG ATTT CCGC                 TTATCCACTCTCCCG  58 134
HR116_RS31550 6792507 .. 6792538 + -20.2  -4.56597   CGGGCCTTTTTATCC      ACAGGACGGCGACC TTCG GGTCGCCGTCCTGC       TTTTTGGCGCGGCAA 100 73
HR116_RS31565 6795538 .. 6795555 + -11.3  -5.84381   GACTTTTTGGTGATA             GGCCATC TGCG GATGGCC              TTTTTTTATTCCTCG 100 125
HR116_RS31585 6798713 .. 6798727 + -11.4  -3.04263   TGTCGCGGCCCTGTA               GCGGCA GGT TGCCGC               TGTTGCCGATCAGGT  65 359
HR116_RS31595 NONE
HR116_RS31600 NONE
HR116_RS31605 6802420 .. 6802431 +  -3.6  -4.11394   GACGATTGCCAGGGA                CTGC CCCT GCGG                 TTTTCCCGCTGAAGT  61 2
HR116_RS31635 6809479 .. 6809495 +  -7.9  -2.66435   TGGAAACCGTTCCGC              TGACCGG TTG CCGGACA              TGGTCTGATCCGAGT  51 23
HR116_RS31640 6811273 .. 6811323 + -21.8  -3.16742   CTCGCCGGCCTCGAT GCCCGCGCCTTCGTCGGCGAAC ACCACCA GTTCGCCGCCGCGGGCGCGGAC TTCCTGCAGGTTCGA 100 260
        rpmH NONE
HR116_RS31745 6831600 .. 6831621 -  -4.3  -2.70979   CTTGAAGGAAACTGA           CAGTAGCAG ATCG CGGCTACGG            GATTGCCAGTGATGG  42 200
        yidC 6829770 .. 6829790 -   -14  -3.25942   ATCTCCGGATAGCAA            GACGCCCC TCGAG GGGGCGTC            TTGTTGTGGACAGTT  77 54
        mnmE 6828360 .. 6828375 - -10.4  -3.35679   CCTGGTTATCCACAA              CTCGGC GTGG GCCGAG               CCCCATTACTTGCCG  66 31
HR116_RS31730 6827308 .. 6827318 -  -2.4  -4.28548   ATCGAGGGAGCAAAA                 CGGC TCG GCGG                 GCTTACAAAAAATAA  62 369
        mnmG 6825300 .. 6825310 -  -2.4  -3.32498   TACCGCAGACATCAA                 GCGC TCT GCTC                 CAGTTGGCGGCCAGA  45 11
        rsmG NONE
HR116_RS31715 NONE
HR116_RS31710 6822895 .. 6822910 - -11.8   -2.8547   AGCGCGCAGAGTATA              GGGGGG GAGT CCCCCC               TGTTCAACTGGCTGG  67 78
HR116_RS31705 NONE
        atpB NONE
        atpE 6821201 .. 6821224 - -10.4  -3.53012   TCGTTGTCCGTCAAA          CACTCAAATC GAAT GATTCGAGTG           ATTAGCCGGCGATTT  68 27
HR116_RS31690 NONE
HR116_RS31685 NONE
        atpA NONE
        atpG NONE
        atpD 6816245 .. 6816262 - -14.1  -2.62184   GCTTGCCTCACATGA             GCGCCCG TCGC CGGGCGC              ACAGGATTACAGTTT  71 32
HR116_RS31665 6815747 .. 6815766 - -13.6  -5.46698   TGCAAAACGAAAAAA            GGGTAGCC CACA GGCTACCC             TTTTCCCTGACACCG 100 61
        glmU NONE
HR116_RS31655 6813731 .. 6813745 -  -2.8  -3.11634   TTCGAGATCACTTAA               GTTTCG TTT CGAAAG               AAAAGTGTGCGAATC  44 74
HR116_RS31650 NONE
        glmS NONE
HR116_RS31630 6807393 .. 6807439 - -11.6  -2.82529   GACAATCAGCAAGGA CCGATTG-CG-CGACCGGCTCC GCAAG GGAGCCGGTCGCCGGCGTTCAG GCGTACAGGTCGCGC  66 22
HR116_RS31625 6806263 .. 6806285 -  -7.6  -3.59262   CCCTACAGCCGGAAA           CGCGGGGAAC CCG GTCCGCCGCA           CGGACCGGGGCTACG  62 53
HR116_RS31620 6804208 .. 6804232 -  -4.2  -2.99471   CCATGCCCAGACACA         GCGCGATCACG CCAC CGCC-TCGCGC          GCACGCTGGCGCCAG  45 7
HR116_RS31615 NONE
HR116_RS31610 6802175 .. 6802185 -  -4.6  -3.01712   CCCTGGTGGCGAAGA                 CCAG CCA CCGG                 GTCGCCGAACTGTTC  45 328
HR116_RS31590 6797875 .. 6797889 -  -3.6  -4.35524   CTGGTAAATTTAAAA               CGTTAT ACT ATAACA               ATTAACACCACAATC  64 493
        dksA NONE
HR116_RS31575 NONE
HR116_RS31570 6795432 .. 6795442 -  -2.4  -4.57073   TAGCGCCGCGAAAAA                 GCCC TGA GCGC                 GTCATCAGCCTGTCA  68 174
HR116_RS31560 NONE
HR116_RS31555 6792832 .. 6792849 -  -9.8   -5.7946   CCGGGAATAAAAAAA             CCGCGC TCGAAG GCGCGG              CTCTTTTCGTTGTCA 100 51
HR116_RS31540 6787800 .. 6787825 - -12.5  -5.22312   ACGGAGATGAAAAAA         CCCCCGTTCCC TGGC GGAAGCGGGGG          TTTCGGCGGCCCCCG 100 63
HR116_RS31535 6787168 .. 6787183 - -11.8  -3.25823   TTTGTCGGAGACGAA              GCGCCG ACGG CGGCGC               GCAGGGCCTCCAGGC  72 107
HR116_RS31530 6786726 .. 6786755 -  -9.2  -3.05384   CGCGCGGCGATCGAA       CAGGACCTGGCC TACTTC GGCCAGTACCTG        CTGAACCTCCTGGAG  57 105
HR116_RS31515 NONE
HR116_RS31510 6782353 .. 6782374 -  -9.3  -3.63744   GCCGCGTGGAAAACA           CCGACGGCC AATC GGCCGCCCG            CTTCAATGACTGACC  68 63
HR116_RS31505 6781514 .. 6781554 - -21.3  -3.68827   CAGGGACGACTGAAA  CTTTTCCACAGGCCGCTCC AGC GGAGCGACCCGTGGAAAAT  CCACTCAGCGGCCAG 100 30
HR116_RS31495 6779843 .. 6779861 - -13.2  -3.60971   ACGGCAAGGCGGAAA             GGCGGAAA GGC TTTCCGCC             AACGGAGCCGGGCAG  77 289
HR116_RS31490 6778023 .. 6778042 -    -2  -2.88544   GTCCAGTCGTAGAGA            CGGCGCAA CATG TCAGGCCG             ACTGCGGCAGCGGTG  40 18
HR116_RS31485 6777406 .. 6777433 -  -4.6  -2.71712   CTCTGCTGGGCAAAC        CGATGCTGGCGC TCAA GCGCCTGGGCCG         TCACCCGACTGCTGG  44 41
HR116_RS31470 6774308 .. 6774320 -  -4.8  -2.67515   GGGAGCACGACATGA                GCCT GCGCG AGGC                GATCAAGGCATCGAA  43 498
HR116_RS31455 NONE
HR116_RS31450 NONE
HR116_RS31385 6757912 .. 6757922 -  -2.4  -3.01791   ACGCCGCGCGCAAGA                 GGGC GCG GCCA                 TCAGTCACGGGTTTT  41 40
HR116_RS31380 NONE
HR116_RS31375 6754532 .. 6754560 - -11.6  -2.94199   TAGGCAGGAACCACA        GGAGCACGGCCG TCCTG CGGCCGTTCGCC        CTTCAAAAACCATGC  67 382
        polA 6750180 .. 6750214 -  -4.3  -5.81412   TCCAGGCAAAAAAAA     CCCCGAGCTTC GTATGGGGAGGGG GAAGTTCGGGG     TTCAAGTCCGGACCG 100 237
HR116_RS31350 NONE
HR116_RS31345 6748333 .. 6748350 -  -6.9  -5.08824   GGCGGACGCAAAAAA             GGGCAGC CGAG GCCACCC              TTTTTCATACATCTT  86 62
HR116_RS31340 NONE
HR116_RS31335 NONE
HR116_RS31330 NONE
HR116_RS31325 6743958 .. 6743992 -  -2.2  -2.54801   GACTCCGAAAGATAG    GCAGCGTGGT-CA GGCGGCGATG TGCAACACGCTGC     GCAGGTTGTCCAACA  38 0
HR116_RS31320 6742849 .. 6742907 -  -6.7  -4.08692   CAACCTGCTGGAAAA CGCCCTG-CGCCATAGCAGCGAAGGCGG GCAGAT CCACCTGCAG-GCC-CGGCGCCAGGGCG ACCGGGTGCTGATCG  67 278
HR116_RS31305 NONE
HR116_RS31300 6738687 .. 6738730 -   -16  -2.78197   TTCTATATATAGAAG CGCGCCGGAAGGCAGCGA GACATCGG TGGCTCCCCTCCGGCGCG TTTTCGCCTGGCCCG  81 162
        gltP 6736773 .. 6736806 -  -9.4  -3.85698   TGCCGGCGCCAGAAA     CGCCGAGGCCCCGG ACGATG CCGGGGCCTCCTGG      GCGGGAAGCCGCCTT  74 39
HR116_RS31290 6735245 .. 6735255 -  -8.2  -3.16191   CTATACCGCGATCAA                 CGCG CCG CGCG                 GCCTCGACGAGCGCA  56 256
HR116_RS31280 6732711 .. 6732756 - -15.4   -3.2794   GTTGATCGACATCAA CGCCGC-CGCCGCAGCCCCGGC GGGA GCCGACGC-ACGGCATGCGGCG AAACGCCTCAGGCGT  84 33
HR116_RS31275 6731956 .. 6731968 -  -2.6  -4.18018   CCTGCGCATCGAAAA                GCCG CTATT CGAC                GACGACATGCTCTAC  62 118
HR116_RS31260 6727443 .. 6727484 -  -2.9  -4.32482   ACGGAGAAGTGAAAA CCTGGGGAGCGGTGACCG CGGCAGC CGATGACCTCTCGCC-GG AAGCTTGCGCGGACG  64 252
HR116_RS31255 NONE
        prfH 6725511 .. 6725543 - -11.2  -3.02511   TGGAGGCGCTGAACA     TCCGCATGCGCGGCG CTGC CGC-GCGCAAGCGGG      GCGAAGAGCCAGTGA  62 75
HR116_RS31225 6720989 .. 6721022 -  -8.7  -3.31144   CGGCCATCTGGACAA     GCCGGCCGGCGACCAG CGC CTGGAAGT-GGCCGGC     AAGACCTTCCAGCAG  58 424
HR116_RS31170 NONE
HR116_RS31165 NONE
         gmd 6709727 .. 6709756 -  -9.3  -2.90496   CGCCGCCGGAAAGCA       CCACGGGAATCAGC ATG GCTTACTCCCG-GG       AAACGCGTCGCAGGT  58 15
HR116_RS31155 NONE
HR116_RS31150 NONE
HR116_RS31145 NONE
HR116_RS31140 NONE
HR116_RS31135 NONE
HR116_RS31130 6702508 .. 6702526 - -10.2  -3.09516   GCCGGCATCAGCGAA             GCCCAGCG CTA CGCCGAGC             TGAACAAGCCGTTCT  62 104
HR116_RS31105 NONE
HR116_RS31100 NONE
HR116_RS31095 6691651 .. 6691682 -  -9.4  -2.78463   AGCCCGGCCAGGATA      CCCGCCAGCCGCA GGCCGAA CGCAGC-GGCGGG      TGTGCCGGCAAGGGC  55 55
        hexR NONE
HR116_RS31075 6687346 .. 6687360 -    -7  -3.21099   GCGGCGCACCAGGAA               CTGGCC AAC GGCCTG               CTGCGCGAACTACCG  52 153
HR116_RS31065 NONE
        oadA 6683087 .. 6683105 - -14.6  -5.61596   ATGCCGATAAAAAAA             GGGGAGCA TCA TGCTCCCC             CAGGGACTTTAACCG 100 51
         mtr 6681156 .. 6681214 - -10.1  -3.01712   GTTGCTGTGGGAATA CCTGGCCTA-CGGCCCGTTCGCCGAGCGC CCG GCGTTCGACGC-CTGGCTGGCCGGCCAGG CGGCCAGCCGCGACC  60 508
HR116_RS31040 NONE
HR116_RS31035 6677333 .. 6677388 - -15.3  -2.63596   CCTGATCCGATACGA GATCGAGCGCGCCCAGGTCCGGCTG TCGACG CAGCCGGGCCGCAGCGCAGCCGATC GAAGAAGGCTCACCG  77 323
HR116_RS31025 6674423 .. 6674445 -  -7.6  -3.13403   CGCCCGGCAGGAAGA           CCCGGTGGAG GTG CTCCAGCGCG           ACATCGGCGGCGCCC  54 394
        purE NONE
HR116_RS31010 6671745 .. 6671803 -  -4.3  -4.41548   GGACAGTGTAGAAAA GCCTTGGGTTCAGTGCCGCCCGCCAACC CAAG GATGGGCGGGCGGCAATCG-CTCACGCC TCGATCAGCGCCTCG  69 19
HR116_RS31005 6671407 .. 6671428 - -18.7  -2.87319   GCGAAGTGAGGAAAC           GCCGGCCCC CGCG GGGGCCGGC            CAGAGCCATCAATTC  91 34
HR116_RS31000 6670753 .. 6670769 -  -9.4  -3.54543   AGCGAGCCGCTGAAA              CGACCC TGAGC GGGTCG              GCGAGCGGACGGCGC  68 83
HR116_RS30955 NONE
HR116_RS30950 6658644 .. 6658671 - -13.4  -2.69207   GAGATGAGGAAAGAG        CGGCCGCCCC GGTTCATG GAGGCGGCCG         AGAGTGGACTCAGGC  72 35
HR116_RS30945 6654754 .. 6654767 -  -5.9  -3.43492   GGAGATGGAGCACAA               CGGCG GGAT CACCG                ACGAGGATGTCGCCG  55 93
        gbcA NONE
HR116_RS30930 NONE
HR116_RS30925 6650621 .. 6650660 -  -5.6  -4.23781   CCGAGGAAAACGAAA  CCCTGCAACTCTCCATGC TCGA GCAGGAAGAAAAGCAGAG   CGGCACCCAGGCCCG  69 376
         cls 6638376 .. 6638407 -  -9.4  -4.18018   GCTGGCTAGGGAAAA      GCTGCACGCCCGC GCGGTCG GCGGGCG-GCAGA      GGCGTCGCTCAGGAC  79 172
HR116_RS30850 NONE
HR116_RS30845 NONE
HR116_RS30840 6635785 .. 6635801 -  -4.3  -3.14132   TGCGCCGTCGAGGAA              GGGAACG ACC CGCTCAC              TCGTCGCCGGGCACG  47 22
        argE 6634273 .. 6634288 -  -2.5  -3.14564   CTATGGCGTGAGCAA              CCGCA AGCTGG TGCAG               GTGATCGGCGAGATG  43 324
HR116_RS30825 6632458 .. 6632484 - -19.4  -3.14132   TTCGGGGTGTACGAA         GCCCCGCCCGGC CGC GCCGGGCGGAAC         GGATAGGTGCGGGTT  93 39
HR116_RS30820 6631506 .. 6631535 -  -7.7  -2.59191   GGACATCTCCAGAAG       TTGTTCCCGCCCC CGAC GGGGCGGGGAGGA        AGAAATCAGCGCGGC  51 31
HR116_RS30815 NONE
HR116_RS30810 NONE
HR116_RS30805 6628759 .. 6628788 - -10.6  -3.32844   GCTGGCACGCGACAA       GGCGCACCGCCG GCAGCA CAGCGGCGCGAC        CAAGATCACCATTCC  66 231
HR116_RS30795 6626846 .. 6626856 -  -4.6  -2.59191   CGACACCGCCACAAT                 CGCC TCC AGCG                 GCTTGCGGAATGCAG  43 151
HR116_RS30790 6626177 .. 6626187 -  -2.4  -2.90194   AGTTGCTCAAGCAGA                 CGTC CAT GTCG                 ATCATCGAGGTGGCC  40 303
HR116_RS30775 6622105 .. 6622133 -  -2.2  -3.52472   AGAGCGGGAAATGAA        CGACCGGTCGCC TACTT GGCGAACGCCAG        CTTGGCCGCGGCTGC  47 8
        choW NONE
        choV 6619997 .. 6620027 - -17.6  -3.96327   AGCGCGGAGGATAAA       CGCGAATGCCCGGC AGC GCCGGGCATTCGTA       GCGGCCCCGAGCGGG 100 51
        betI NONE
        betB 6615720 .. 6615743 - -10.2  -2.78384   TTTCTCGGCATGACA          CCGGCCGCGAC GCT GGCGCG-CCGG          TGTCTGGAAGTTCGG  60 108
        betA 6613969 .. 6613986 - -14.1  -3.20382   GGCTAGACGCAGGAA             CGCCGGC TATC GCCGGCG              TTCTTGTTTGCGCGT  76 44
HR116_RS30735 6611456 .. 6611473 -  -2.6  -4.82548   TAAAAAGAGATAAAA             CTCTCG AATTCA CGAGTG              TTACTTGCGCTGCTG  74 503
HR116_RS30730 NONE
HR116_RS30725 6609701 .. 6609711 -  -5.4  -2.81464   GGATCACGCAGCACA                 CCAA CAA TTGG                 TGGGTCTGGGCAGAT  44 23
HR116_RS30720 6609546 .. 6609583 - -10.1  -3.34398   GTTCTGGTGCAAAGA   CCAGAAATCAATGTTCA TCCA CGAACATTCATTTCTGA    GCTTTCGACGATTGT  66 47
HR116_RS30715 6606458 .. 6606479 -  -5.9  -3.33162   GACTTCACCTTACAA           CACACAATC ATCA GATTGTTTG            GGTGTTATATGGTCA  52 20
         rrf 6606186 .. 6606221 - -19.2  -4.07568   TTTCCGCGCGCAAAA    GCAAAACCCCTGGTCA TCGC TGACCAGGGGTTTTGG     GATAGGAGCTTGACG 100 33
HR116_RS30705 6604743 .. 6604770 -   -12  -4.22375   ACATGACGCAACAAA        GCCCGCCAGC-AG AGC CTCGCTGGCGGGA        AAGGCCGGCGGGTCC  86 109
HR116_RS30700 NONE
        pstA NONE
HR116_RS30690 6599802 .. 6599857 - -14.8  -2.81547   CGGTGACATCAACGA GCTA-CGGAGAGCGCCGGAGGCAGCGG TATCG CCGC-GCCTCCGG-ACGCGCCGCTAGC CGTAGCGGCCGGTGA  75 21
        phoU 6598992 .. 6599017 - -10.5  -4.15222   AGTCGCGCGAAGAAA         CAAGGCTCC AGGTCAAG GGAGCCTTG          CCTGCGGAAGATCAC  81 37
HR116_RS30680 6597968 .. 6597981 -  -3.8  -2.62983   GCCAGGGCGAGACGA               CAGC GAGCGG GCTG                TGAACGGATCGTCGG  41 52
HR116_RS30675 6596964 .. 6596986 - -16.2  -2.64616   GCTCGACTGAGACGA           GCCGGCGCCG CCA CGGCGCCGGT           GACTTTTCAAGGCTC  80 32
HR116_RS30655 NONE
        glcD NONE
        glcE NONE
        glcF NONE
HR116_RS30620 6586101 .. 6586117 -  -5.8  -3.90856   AACGGGCCAACCAAA              GATGGG TGGTG CCCACC              GGTCGCCTCACAGCC  62 33
HR116_RS30615 6585787 .. 6585802 - -11.8   -5.1675   CCAGGCATGAAAAAA              GGCGGC CAGG GCCGCC               TTCTTCACCGGCGAG 100 47
HR116_RS30610 NONE
HR116_RS30605 6584261 .. 6584274 -  -3.8  -3.34192   AACGGCCGGAACCAA               TGGC ATTCAA GCCA                TGAGGCCGGGTAACT  48 18
HR116_RS30600 6583759 .. 6583783 -   -15  -3.14211   AGCGTCTTCGACGAA          GCCCGGAGCC GCTCT GACTCCGGGC          TCTCGGCGGTCAGTT  80 35
HR116_RS30595 6583258 .. 6583273 - -11.8    -3.727   CGGATGAGATCGAAA              GCCGCC CTCA GGCGGC               TTTCTTCTCCGGAGC  78 17
HR116_RS30575 6577687 .. 6577705 -  -4.4  -3.62597   GGGACGCGCCAACAA             CCGGTTGG CAG CCATCAGG             CGTCCCCGAGTACCG  53 21
HR116_RS30570 6576834 .. 6576863 -  -7.2  -3.03159   CGAACGCGGCGAACA       TGAAGGCCCCTCG AAACG CGAAGG-CCTCCA       GTCTGTGCAGCGCGG  54 63
HR116_RS30565 6576073 .. 6576095 -  -4.1  -3.61517   ATCTGGCTGCAACAA          GGCAAC-CGC GGCC GCGAGTTGCT           GTTCAGCCTCGACGA  51 144
         rph NONE
HR116_RS30525 6569564 .. 6569581 - -14.1  -4.84527   GTCAGACATGAAAAA             GCCGGCG CATG CGCCGGC              TTTTCTATTCCACGT 100 46
        pyrE NONE
HR116_RS30510 6567339 .. 6567359 - -10.4  -2.93435   CGAACGAGCGACAGA            GCCAGCCC CTGCC GGACTGGC            TGCGCGAGAAGATCA  59 70
HR116_RS30500 6566293 .. 6566326 - -10.1  -3.14132   CGGTGCGCGGAGCAA     CTCCGCCAGCGCGGG GTTT CCCACCATGGCGGCG      AACGCACCGAGCGCT  64 96
HR116_RS30495 NONE
HR116_RS30490 6563644 .. 6563672 - -18.9  -3.35992   AGGCATCGGAACGAA        GCGGCAGCCCG GTATCCG CGGGCTGCCGC        CATCGACTAGGAAAA  93 53
HR116_RS30480 6561022 .. 6561041 - -11.4  -3.41745   GTCCTACAACATCAA            TGCCGACC TGGT GGCCGGCA             AGGTGGCGGAAGCGC  70 367
        radC 6554769 .. 6554803 -  -4.9  -3.09327   GCAGTTCAGCGAACA    CCACCAGCGGCTGATCG ACG CG-CCGGCCGC-AGCGG    TACTCGACGCGGTGG  47 509
        rpmB NONE
        rpmG 6552319 .. 6552335 - -15.1  -4.98531   GCCGGAAATGAAAAA              GCCCGCC AGG GGCGGGC              TTTTCGCAAGGTGCC 100 48
HR116_RS30420 6548661 .. 6548692 - -23.8  -2.93723   GGCGCACGAAGCACA      GCGGCCGGGCTTCC AGAA GGAAACCCGGCCGC       GGGTGTGGCTCGAGA 100 71
HR116_RS30415 6546949 .. 6546973 -  -7.7  -2.52543   ACTCCCTGGAAGCCA          CCGACGTGCCC GCC GTGCATGCCGG          CTACGCGCCCTATCG  49 480
HR116_RS30395 6541006 .. 6541022 -  -4.4  -3.13299   GCAGGACAGCGAATA             GA-GCGC AGAG GCGCATC              GGGGGTTCTCCTGTA  47 45
HR116_RS30390 NONE
HR116_RS30385 6540407 .. 6540453 - -10.2   -4.8048   TCGCGACAGGAAAAA TTCCGCGGACACTGC-CCGGCC CTTGC GACCGGAGCAGCGTCC-CAGAG CGCTCGCGGAGCCTT 100 45
HR116_RS30380 NONE
HR116_RS30375 6538460 .. 6538479 - -12.1  -5.44721   ATCAGGCGAAAAAAA            GCCCGGC TCTCCG GCCGGGC             CAGACAAAACTCAGG 100 36
         alr 6537216 .. 6537242 -  -5.1  -4.28774   GCAGGCAAGGCAAAA        CGAGGCCGCACA CGGC TG-GCGACCCCA         AGTCGGCCGTATCAT  68 109
HR116_RS30365 6536465 .. 6536490 -  -3.1  -2.78596   CACCCGGGCACGATA         CCGATCACTGCG GGC CGC-GCGGGCGG         GCGCAAGTATAACGG  40 162
HR116_RS30360 6535954 .. 6535969 - -11.8   -4.8048   CGCGGATACGAAAAA              GCCGCC AGGA GGCGGC               TTTTCGCGACACGGT 100 51
HR116_RS30355 6533814 .. 6533846 -  -6.9  -3.92075   ATCGTCATCGAGAAA      TCCTTCCAGGATGGC CGC GCCCTGCTGGAAAGC      GAAGGCTACCGGGTC  66 105
HR116_RS30335 6527209 .. 6527224 -  -6.8  -3.36327   CGACGGCACCCAGAA              CGTCGCC ATG GGCG-CG              ATCCGCGGTCTCAAG  56 258
HR116_RS30325 6524944 .. 6524962 -  -4.4  -3.60627   CGACCCTAGCGCAAA             CCCTGCGC CCG GCCCAGCG             ACGGCAGCGACCTGT  53 76
HR116_RS30320 6523486 .. 6523500 -  -5.6  -3.16039   AAGCAGGGCTACGAA               GTCCAG GTG CAGGAC               GGCGAGGACGGCCGG  49 338
HR116_RS30305 NONE
HR116_RS30300 6517057 .. 6517070 -  -2.3  -3.14132   TTTGGCCTTTACCAA               GTCGA GGCA TCGGC                ACCCTCCCTAACTGA  43 5
HR116_RS30295 6516379 .. 6516393 -  -7.1  -3.36569   TTAATTGTGGAAATA               GCGCT ATTTG AGCGC               CTAAGATGAAGGAAA  55 189
HR116_RS30290 6515166 .. 6515176 -  -4.6  -4.56978   CTTGCAAATAAGAAA                 GCCG AAA CGAC                 GCAGGCAAGACTATC  74 36
HR116_RS30240 NONE
HR116_RS30235 6502163 .. 6502193 -  -5.4  -4.05788   CGGCCTTAAACGAAA       CCAATGCGCATGCT CAA ATCATGAGCATCAG       GTGATCGAACCAGAT  63 368
HR116_RS30230 6499424 .. 6499447 -    -3  -4.02334   GACGTACACCAGAAA          GCTC-GGACGC GGG ACGCCCAGGGC          ATCAGCCAACTTTCC  58 355
HR116_RS30225 NONE
HR116_RS30220 6496942 .. 6496958 -  -2.2  -3.14931   GTTATCGGTGAGCAA              CGCC GTCATACCT GGCG              CTCCAAAGCCTCGGC  43 14
HR116_RS30215 NONE
HR116_RS30210 6494199 .. 6494217 -  -2.4  -4.20516   CGGTTACGGAATAAA             TCTCAACG AAG CATTCAGA             GCGCGAAGCGCTCCT  59 21
        zorA NONE
HR116_RS30200 6491260 .. 6491288 -  -4.7  -3.05963   ACCGGCATGTGAACA       GGAGGCAGCTTCA CGGCT TGA-GCT-CCTCC       AGACGCTCACGAACC  47 7
HR116_RS30195 NONE
HR116_RS30190 6486028 .. 6486058 -  -5.2  -3.77553   CAAGATTACCAAGAA       CCGCGGCTCGTTCC CCA GTGACGAGGCGCTG       CTGAAACTCTTCTAC  60 186
HR116_RS30180 6483601 .. 6483638 -  -2.7  -3.14132   GGTCTGGGTCATGAA   CACT-CCTTGCGGTGGAC ATT ATCCACCTTAAGTCAGTG   TCCACTCAGCCCGGG  43 15
HR116_RS30175 NONE
HR116_RS30170 6482315 .. 6482325 -  -3.2  -3.75153   CTTGTTTAAGGTAAA                 GAAC GAC GTCC                 ACTATTTTCTGCATC  54 141
HR116_RS30165 6481614 .. 6481644 -    -6  -3.90922   AGCGTTGCGAAACAA       TCCTCATGCTCCTC TCC GTGGAGCAGGAGAT       GGTCACACCATCTGG  62 259
        glnK NONE
HR116_RS30145 6477926 .. 6477954 -   -21  -3.64822   AGCGCGGGAGGCAAA        CCGACGCCCGGC GGAAA GCCGGGCGCCGG        CAGGTATTACAGGTT 100 32
HR116_RS30140 NONE
        sutA 6476832 .. 6476866 - -18.7  -2.62263   ACCGGCGCCATAGCA    CAAGGCCCGCCATCCC TTGC AGGA-GGCGGGCCTTG     GGATGGCGCGAAATC  87 39
HR116_RS30130 6475465 .. 6475497 -  -6.7  -3.13403   GGCTGCGTATCAACA      TCGCCTATGCCAGCG ACC CGCGGGCCCTGGCGT      TCTTCGAGGCGTTCG  53 70
HR116_RS30120 6472779 .. 6472799 -    -9  -2.70932   GCCCGCCTGCAATGA           CG-GACCGG GCCC CCGGTCGCG            GGTAGCGCCCTAGGC  57 35
        cyaY NONE
HR116_RS30080 6467332 .. 6467363 - -15.2  -5.10029   AGGAATCGCAAAAAA      GCAAAAACCCCGCC CGAA GGCGGGGTTTTCCC       GGACACTAACACAGT 100 67
         rnk 6466641 .. 6466670 -    -5  -3.04144   CGCGCAGCGGCAAGA       CGGC-GGCGCA GCGGTGTAT TGCGCCAGCCA       TATCGGTTGCAGCAG  45 220
HR116_RS30045 NONE
HR116_RS30040 NONE
HR116_RS30035 6459627 .. 6459645 -  -2.2  -3.43122   CTACAACAAACAAAG             CGGCATCG ACC CGGCGCGG             GCTTTCCTGGCCACG  47 102
HR116_RS30025 NONE
HR116_RS30020 NONE
HR116_RS30015 NONE
HR116_RS30010 NONE
HR116_RS30000 6454364 .. 6454380 -  -2.9  -3.95787   CACCATATTGACAAA              CTGCGCC ACA AACACAG              CCAGACCAATTCCAT  56 49
HR116_RS29995 6453244 .. 6453281 -  -5.5  -3.73968   AAATCCGGCAGCAAA   CGGGGGTCAATTAGCATC CAG GATGCTTCCTG-CCCCTG   GATACGTTGTGGCGA  60 378
HR116_RS29985 6452555 .. 6452586 - -15.2  -5.10029   AGGAATCGCAAAAAA      GCAAAAACCCCGCC CGAA GGCGGGGTTTTCCC       GGACACTAACACAGT 100 67
HR116_RS29950 NONE
HR116_RS29945 NONE
HR116_RS29940 6444852 .. 6444870 -  -2.2  -3.43122   CTACAACAAACAAAG             CGGCATCG ACC CGGCGCGG             GCTTTCCTGGCCACG  47 102
HR116_RS29935 NONE
HR116_RS29930 NONE
HR116_RS29925 NONE
HR116_RS29920 6437177 .. 6437203 -   -10  -3.53444   CTATGCTTCCGGAAA         CGACGGGCGCTC AGC GCACGCCAGTCG         CCGAAGCCTCTCGCC  68 9
HR116_RS29910 6434360 .. 6434378 -  -4.5  -2.63858   CAGGACATTCATAAG             CTCAGGC TTCCT GCATGAG             TCGCGCACATGGATA  41 8
HR116_RS29905 NONE
        hemC NONE
HR116_RS29895 NONE
HR116_RS29890 NONE
HR116_RS29885 6429421 .. 6429441 -  -6.1  -3.57144   TTCCCCATGCTCAAA            TGCCCGC CACCACC ACGGGCA            GCCCCGGAGTACGCC  57 0
HR116_RS29880 6428726 .. 6428747 -  -3.5  -3.75665   CGAGAGCTGACGAAA           GGCCACGGG ACAG CCCGCGTCA            GGCACGTCGGAGGAA  54 23
         rsd 6427932 .. 6427959 -  -7.7  -4.87318   GCTAAAATGCAAAAA        TGGCGC-TCTCC CGCAT GGAGACGCGCCG        TTTCGTAACGACTCG  88 49
HR116_RS29865 6426103 .. 6426118 - -10.4  -2.87132   GCGGCTTTGCAGACA              GCGCCT TAGG AGGCGC               TGGTCGGGGCGGCGC  61 15
HR116_RS29855 NONE
HR116_RS29850 NONE
HR116_RS29845 6422235 .. 6422250 - -11.8  -5.36441   GGCGGACAGAAAAAA              CCCGGC AGAT GCCGGG               CTTTCCCGAGGATAC 100 102
HR116_RS29840 6421445 .. 6421465 -  -8.9  -2.93252   ACTCTGTAACAATCA            CGCCCATCA GCG TGTCGGGCG            GCTCAGAGCGGCGCT  55 28
HR116_RS29835 6419418 .. 6419444 - -18.8  -3.00946   CTTCCGTAGAAATGA         CGACGGCCAGTA TCG CACTGGCCGTCG         TGGTTGCGCGAACCC  91 43
HR116_RS29830 6418434 .. 6418458 -  -4.1  -3.53012   GCGTGCGTCTCGAAA          CCATCGAGTCG AGA CGCCGCGATGC          GCGAAACGCCCTCCC  51 480
        hemB NONE
        ppk1 6413315 .. 6413337 -  -6.3  -3.76224   GCGGCACCCAGGAAA          TGCCCTC-GG TGCG CCTGAAGGCA           GAGCCCAAGAGCCTT  62 138
        trxA 6411390 .. 6411408 - -17.4  -5.89947   GAAACGCAAAAAAAA             GCCCCGCG AAT CGCGGGGC             TTTCCAGCGAGGCCT 100 50
         rho 6409884 .. 6409908 - -21.5   -5.1675   CCAGGCATGAAAAAA          GGCGCTCCGGT CAA ACCGGAGCGCC          TTCTTCAATTCCCTG 100 46
HR116_RS29785 6407815 .. 6407864 -  -6.4  -3.06492   CCATTCACTGCAAGA CCCCACATCCTACCTGCTCCCGG CCCAT CCGGCAGCAGGCAA-ACGCGGCA TTCGGTCACTGCTGG  51 31
        ubiD NONE
HR116_RS29775 6405111 .. 6405127 -  -9.3  -4.15044   CTGGCGCCGAAGAAA              GCGGCCG GCA CCGCCGC              CGGCTTCACCGGTCT  75 255
        fliL 6402124 .. 6402146 -  -7.6   -3.6392   CACAGGAAAGCAGAA           TCCCCGGTGC CTC GCATCCGGGA           GCGCGGGACAGAACG  62 52
HR116_RS29755 NONE
        rbbA NONE
HR116_RS29745 6396828 .. 6396886 -   -10  -3.61715   CAGCGCCGGGAAGAA CCCCTGGAGCGCCCGCGACGTCAGCTTC GTC GAAGCCTTCGCCGAGGTCGTTCCACTGG CCCGGTTGAAGGCCC  67 157
HR116_RS29715 NONE
        pepP NONE
        ubiH NONE
HR116_RS29700 NONE
HR116_RS29695 6389745 .. 6389769 -    -5  -3.62046   CTACCTGCGCAACAA         GGCGCAGGTCA TGCG TGAC-TGCGCG          GCGCTGTTCTGAGGA  55 74
HR116_RS29680 6386658 .. 6386679 -    -3  -3.44284   CCTGCATGAAGAACA           GCCT-CGTC AGCGG AACGTAGGC           ACGAATGATAAGAAA  49 63
HR116_RS29675 6385606 .. 6385636 - -19.1  -3.33696   TCGGTGCGGAACGAA      CGACGCCCC-GCTC GGAC GAGCCGGGGCGTCG       AGTATAACCGGCGGT  93 40
HR116_RS29670 NONE
        gcvT NONE
        gcvH 6382228 .. 6382259 -   -16  -4.56597   TCGCCGCTGCAAAAA      GAACAAAGCCTCGA ATGA TCGAGGCCTTGTCC       AAGGATAGCGGGTTT 100 61
HR116_RS29655 6379160 .. 6379204 - -12.2   -3.1355   GCCAGCGACATGGAA CTGGCCAGCGCGA-TCCTCGCC GGC GGCGAGCAGTC-CGCCGTCCAG CAGTAGGCCACGGCG  70 66
HR116_RS29630 6374091 .. 6374109 -  -9.5  -3.54488   GGGTCGGAAAGAAGA             CCGGCGC TCACC GCGCCAG             CAATTGCTCCAGGCG  68 14
HR116_RS29625 6372779 .. 6372795 -  -4.4  -3.14602   GCCAGCCGACGAAGA             TC-GCGC TCAG GCGCCGA              ACAGCGCGCGCAGGA  47 15
        argE 6371392 .. 6371402 -  -2.4  -3.53444   GGATCGCCCTGCAAA                 GCTC CGG GCGC                 ATCATGAAGTTCCTC  48 154
        argA 6369185 .. 6369218 - -27.5  -3.10409   CAGCAACTGAGCGAA     GCCGGCGCGCCCCTG CGCC CAGGGACGCGCCGGC      GGATCACAGGCTCTT 100 29
        ompR 6363680 .. 6363709 - -21.5  -2.73875   TTGCGGGTAAGACGA       CGCGGCCGGTGCA TCGC TGCACCGGCCACG        CGGAGACTCAGGCCT 100 33
HR116_RS29585 6361849 .. 6361863 -    -7  -3.49618   GGCGGACACAAGCAA               CGCGTC GAA GGCGCG               CTGATCGGCGGCAAC  58 465
HR116_RS29565 6358885 .. 6358907 -   -12  -2.87132   TGGGGCTGCTACACA           CCGCTGGC GGCGAAG GCCAGCGG           CTGGCTGGTGCAGGT  63 154
        hslO 6357187 .. 6357197 -  -2.4  -3.43042   CGCTGGATGAAAAAT                 CGTC AGT GGCG                 GGTCTCGGAAGGCCC  47 17
HR116_RS29550 6355493 .. 6355506 -  -9.5  -5.14563   TCGCCCATGAAAAAA               CCGCC CGAA GGCGG                TTTTTTCATGGTGCC 100 51
HR116_RS29540 6354214 .. 6354254 -  -5.9  -3.01791   ATGGCTGGTCGAACA  GATCCGCCAGGTCGGGGCC GCC GGACCGGACTAGGGGAATC  CGGGCAGTCAGAAGC  49 33
HR116_RS29530 NONE
HR116_RS29525 6350175 .. 6350190 -  -5.4  -3.29263   AGACGCCCGTCAGAA              CGAGAA ATGC TCCTCG               GGCAGGGCCATCAGG  50 4
HR116_RS29520 NONE
HR116_RS29515 6348264 .. 6348305 -    -3  -3.65522   GATCGAGGCGAACAA GCTGGTCCAGTA-CCGCCTGC TCA GCCGGCCGCTACCGGAC--GC TGGCCAGGCGGTCGA  53 233
HR116_RS29505 6347497 .. 6347514 - -14.1  -4.11394   AGCTGATGTGTAAAA             GCCCCGC GAAC GCGGGGC              TTTTACTTTCTACCG  93 45
        lysM 6341341 .. 6341359 - -13.1  -4.54727   CCGCGGAAACGAAAA             CCCCGCC ACGCG GGCGGGG             TTGGCGAAACGCCGG 100 43
        nudE NONE
        cysQ 6339079 .. 6339104 - -23.3  -4.97666   AACAGATCAGAAAAA         CGCCGCGCCCC AATT GGGGCGCGGCG          TTTTTCTTAAGTAAA 100 71
HR116_RS29455 6337977 .. 6337991 -  -6.4  -3.26947   CAATTTTGACATCAA               GCTCCA CGG TGAAGC               TCCCATTGAGTTATC  55 79
HR116_RS29450 6337726 .. 6337744 - -13.8   -4.3208   CGCCACAACGGAAAA             GGCCCGGC TAG ACCGGGCC             TTTTCGTTTCAGTGC 100 34
HR116_RS29310 6310376 .. 6310390 -  -2.1  -3.52896   TCAGTACTGACATAA               CGACA GTCCA TGTCA               TGTTCTCGATGGGAA  47 45
HR116_RS29305 NONE
HR116_RS29300 6309417 .. 6309442 -  -3.3  -4.15044   CCCTGCCCTAATAAA         GCCTGACCTAC CCGC ATAAATCAGAC          TACAACCCATTATTC  61 35
HR116_RS29295 NONE
HR116_RS29290 6307739 .. 6307755 - -10.8  -5.49569   CACGAACATAAAAAA              GGCGCC ACCAA GGCGCC              CTTCAGTATGTAACT 100 42
HR116_RS29170 NONE
HR116_RS29165 6286933 .. 6286949 -  -9.3  -4.58395   TCCAGCCGTGAAAAA              GCCGCTC ACT GGGCGGC              TTTTCCGTTGCGGCG  91 43
HR116_RS29095 6273705 .. 6273724 -  -9.2  -4.35461   TGAATACGACGAAAA            GGCTCACC TCCG GGTGGGCC             TTTTTGCTTTCCGCC  83 47
HR116_RS29065 6266386 .. 6266396 -  -6.8  -3.37344   CCCGGAGGTAATTAA                 CCTC CGG GAGG                 CGGGCCGCCCAACAG  55 11
HR116_RS29060 6264665 .. 6264679 - -11.4  -3.28708   TAAACCCGAGACCAA               GGCAGC TCT GCTGCC               GCAGCCGGTCGAGGG  69 82
HR116_RS29055 6263843 .. 6263864 -  -7.9  -4.56597   GGCCCCGGGCAAAAA           GCCGC-CCGG CGC CTGGCGCGGC           ATCCATGCCTCACCA  83 373
        hisB NONE
        hisH NONE
HR116_RS28985 NONE
        hisA NONE
        hisF 6250169 .. 6250193 -  -6.4  -4.44046   TGTACCTGAAAGAAA         GCCGCGCGAGT GTCG ACTCGCGCT-C          AGGAATGGCTAGCCG  76 75
HR116_RS28970 6249275 .. 6249328 -  -7.2  -3.82378   AGCGAGGCAGAATAA CCAGCGCCGCGCCG-CCAGGCCAGC CTTTT GCCAGCATCGCCGGCGAGGCGTCAG TAGCGCTCGCGGATC  68 22
HR116_RS28965 6248440 .. 6248453 -  -5.2  -3.53012   GGCGGGGCCGGCAAA               GGCG TTTCCC CGCC                CGGCCCCCTGTTGGC  53 54
HR116_RS28960 6247166 .. 6247191 -  -6.1  -3.15861   GACCACCCCGACGAA         TCGCGCTCG CTGATCGC CGAGCTCGA          TCGCGACGCGCTCGA  51 411
HR116_RS28925 NONE
        grxC 6238754 .. 6238765 -    -3  -2.52464   CCTTGGGTCAATTCA                TGAA TGGT TTCA                 GGCAGACAGCAGCGC  39 23
        secB 6238199 .. 6238215 - -10.8  -4.76041   GACAGGCATGAAAAA              GCCCGC GCAAG GCGGGC              TTCTTCGCAAGTGCT 100 45
HR116_RS28905 6236968 .. 6236988 -  -8.1    -3.737   CAATCCTTCAGGAAA            GCGCGCGCG CCG CCAGCGCGC            TCATGAGAATTGGCA  69 286
HR116_RS28880 6229605 .. 6229615 -  -3.2  -2.94924   GGCCCATGGAGAAAC                 GCAA AGT TCGC                 CGCGCCGTTCGGTTA  42 481
        thiI 6226312 .. 6226332 - -10.4  -3.61398   GCTGCCGCCGAACAA            GCCCGGCT GCTTA AGCCGGAC            GATAAACACGCACAT  70 15
        typA 6224210 .. 6224249 -   -25  -4.34402   CGGCGCATAGCAAAA  CGGCCGGTAGGCCGGGCA CCCC TGCCCTGCCTGCCGGCCG   CGAGGCACGCCGTTG 100 64
HR116_RS28850 6222994 .. 6223015 -  -2.3  -3.13899   AATCCTTGATCAAGA           GGTACCA-CG ATC CACTGATACC           TGCCCTGGCCATCCT  43 121
HR116_RS28845 NONE
HR116_RS28840 6217941 .. 6217998 -  -2.4  -3.53012   GGGGCCCGTCGTAAA GCCTCCTCAGCCGAAC-AG-CAT-AGCGCG GAAC CG-GCTCATGGCTTGTTCGGC-GAGGA-AC GCAGCAGGCTCATTG  47 3
HR116_RS28835 6215890 .. 6215920 - -19.7  -3.85698   TCCGTCGGCGAGAAA       CGCGACCGGCGCC GCCCG GGCGCCGGTCGCC       GCTACCTCAGAAGTC 100 32
        gloA 6215126 .. 6215145 -  -4.9  -5.24989   GGAGAGAGGAAAAAA            CCCGCGC AGTTTA ACGCGGA             ATTGGCGGTCACGCT  91 120
HR116_RS28825 NONE
HR116_RS28820 6213490 .. 6213500 -  -2.4  -3.91897   CCTTGGAGTCAGAAA                 CGCG AAC CGGG                 TTCCCTGAGGAACGC  54 8
        bamE NONE
HR116_RS28810 6212567 .. 6212581 - -12.8  -5.63517   GCTGGAAAGAAAAAA               CGCCCC GGC GGGGCG               TTCCTTCACTGGCTC 100 31
        hutC NONE
HR116_RS28795 6209595 .. 6209619 -  -8.6  -4.60797   TTTGGATAGACAAAA         GCGCCTAC-CC TTTC GGTGTAGACGC          TTTTTCCTGGCGGCG  86 49
HR116_RS28790 6208187 .. 6208199 -  -4.7  -2.87026   GATAGGGATACCAGA                CGGCC AGT GGCAG                GTAGCCGAGCATGGC  46 305
HR116_RS28745 6201214 .. 6201228 -  -4.9   -3.6869   TATAGGAAGTTCAAA               CGCCC TTTTC GGGCA               GTCTGCTGGGTAGGC  55 237
     tetR(G) 6198409 .. 6198439 -  -7.5  -3.35679   TGCTGCCACCGAGAA       GTCGCCAGTCGTC TAGCC GACGACTGGAAGC       AAGCCCGCTCCGATG  58 217
       intI1 6190607 .. 6190620 -  -2.3  -3.53224   GATCTTCTCGGCAAA               GATGC GCGT GCAGC                CTGCGGCGTGCAGCT  47 419
HR116_RS28680 6189821 .. 6189839 - -10.2  -2.72632   CAAGGGGAGAAAGAG             CCGCGTGG TGC CGACGCGG             TGTAGCCGAGGGTAG  60 58
HR116_RS28670 NONE
        merP NONE
        merA NONE
        merD NONE
        merE NONE
HR116_RS28645 6185132 .. 6185142 -  -3.2  -3.37198   GCCGTATACACAACA                 GGCT TCA AACC                 GCGCTGACTGGTGCA  46 221
HR116_RS28640 NONE
HR116_RS28635 NONE
HR116_RS28630 NONE
HR116_RS28625 6180386 .. 6180436 - -14.1  -2.65808   ATGCCTAACAAGGCA CTCCAGCCGACGGCTTTGCCTTCGC TGC GCTACGGCAAATCCG-CGGCTG-AG TTTGGGCGTTGAACG  71 136
       intI1 6177608 .. 6177627 -  -3.4  -3.10164   GGATCCATCAGGCAA            CGACGGGC TGCT GCCGGCCA             TCAGCGGACGCAGGG  43 127
HR116_RS28600 NONE
HR116_RS28595 NONE
HR116_RS28590 6172450 .. 6172466 -  -6.5  -3.22298   CTCACCGACCAGGAA              GGCGAGA AGT TCTGGCC              GATCTACAACACCTA  53 299
HR116_RS28575 6170114 .. 6170133 - -11.4  -3.29471   GCTCCAGCACAGCAA            CGGCCTGC CGCG GCAGACCG             CCAGCGAGCCACGCC  68 416
HR116_RS28565 6168914 .. 6168968 -    -7  -3.30771   GTACATCGGCGACAA CTCGATCG-GCCGCATCGAACTGCG CGACAT CGCCGACCTGCGCGGCACGATCAAG GTCTGGGGTCACTGA  55 62
HR116_RS28555 6167410 .. 6167445 -  -6.1  -3.02263   AGACCCTGTGGAACA    TCATCACCCCGCAGGC CCTGC GCCTG-GCGGTGCCGA    GCCTGTCGAACAGCC  49 249
HR116_RS28540 6165370 .. 6165387 - -12.7  -4.98531   GGCGGAAAGGAAAAA             GGAGGCC CAGC GGCCTCC              TTTTTTCGTTTCCGT 100 40
HR116_RS28530 6162481 .. 6162498 - -14.1  -3.49777   CGCCACAGACGAGAA             GGGCCGG ATGA CCGGCCC              TCTGCGTTGCGACAC  79 44
HR116_RS28525 6161731 .. 6161753 - -12.7  -3.05384   GCCGGCGCTAGGGAA          GTCGGCCGCC CCCC GGCGGCCG-C           AGCGGTTCAGAGCAC  71 32
HR116_RS28520 6160631 .. 6160648 -  -3.3  -3.16564   GGTCCAGGCTACGAA             GCCTTGC TGAA ACCAGGC              TTAATCGGCGCTTAA  44 48
HR116_RS28515 6160192 .. 6160221 - -19.3  -3.66178   GGTCGGAACGCGAAA       CGGCCCACCTCCC GGAA GAGAGGCGGGCCG        TTTCGATTCAGGGCC 100 41
HR116_RS28480 6152043 .. 6152068 -  -4.7  -3.14878   TCGCCGAAGCCAACA         GCCGC-TTCGCC CAC AGCGAAGGCAAC         CAGGCGGGCTATTCG  47 104
HR116_RS28470 6149102 .. 6149158 -  -7.9  -3.76224   GTCTCAGCGACGAAA GCTGACCC-A-GCCC-TGGCCGCCGTCG ACAC CGGCGGCGGCTGCGGGCCTCAGGACAGC CATTCGATGGCGAAC  65 16
        ilvA 6146159 .. 6146172 -  -2.4  -2.93723   TCCCGAGGAAGGAGA               TCAC CTGCCC GTGA                AGCTTAGCAGCCCGT  40 60
HR116_RS28450 6145584 .. 6145597 -  -9.5  -3.48276   TGCGTTCCTACAGAA               CCGGC GAAG GCCGG                TGAAGTCCATTTCGT  65 48
HR116_RS28445 NONE
HR116_RS28440 NONE
HR116_RS28425 NONE
        ptsP 6138893 .. 6138928 -  -2.3  -2.71712   CGCTTGCGGGGAAAG    CGTAAGCGCCGCACG ACGAAG CGTCCGGCGCGCGGG     AAATCAGGGCTGGAC  39 29
HR116_RS28415 6137394 .. 6137406 -  -2.6  -3.40403   GCTCTGGCACTACAA                CCCC CGCGT AGGG                CCACCGCGCCTGCTG  46 395
HR116_RS28405 NONE
HR116_RS28400 6135277 .. 6135305 - -12.4  -4.25104   CCCCGGGCACGAAAA       GCGGCTCAGGCCG CCTT CGGC-TGCGCCGC        GTCGCGGCGGTAGGC  91 2
HR116_RS28395 6133986 .. 6134002 -    -5  -3.60296   GACCCCGAGTGGAAA              GCGCCG CTGCT CGCCGC              GGGCTACCGTTTCGT  52 305
HR116_RS28375 NONE
HR116_RS28365 NONE
HR116_RS28360 6126528 .. 6126551 -   -11  -4.05446   TCGTGGAAGGACAAA          GGCGCGAG GATAAACA CTCGCGCC           GGCGGACTCCAGGCC  82 57
HR116_RS28355 6125690 .. 6125711 -  -7.9  -3.61398   GGTGCGCGGCAACAA           CGACACCCA GGAC TGGGCGGCG            GACATCCCCGAGCGC  60 308
HR116_RS28325 NONE
        mutM 6117850 .. 6117860 -  -2.4  -2.62184   TGTGGCGGTAGAGTA                 TGCG CGG CGCG                 GCGCTTCAGCGTTGG  38 31
HR116_RS28315 6117179 .. 6117189 -  -2.4  -3.51032   ATCGCCTAACTATAA                 CAGC GCT GCGG                 GTAGTGCCAGCGTGA  47 47
HR116_RS28310 6116739 .. 6116767 - -14.7  -4.43501   AATGCATCGAGAAAA        CAAAAAGCCGGTC GAT GACCGGCTTTTTT        TCATTCCGTTGGAAA 100 42
HR116_RS28305 6115517 .. 6115543 - -10.7  -2.52464   CCGGCTGGCAATCCA         GGCGGCGTGCC TCACT GGCTCGCCGCT         TCAACCGCCTGCTGC  62 10
HR116_RS28270 6107740 .. 6107772 -    -4  -4.24342   GCGCCGAGGAAGAAA      CGCCGATTCGCGTC TGGCT GGCGGAAATCGCCG      TGCTGCCCGGCGCAC  65 192
        ftsY NONE
        ftsE NONE
HR116_RS28225 NONE
        rpoH 6098227 .. 6098247 -   -14  -5.60993   CCGGGCAGAAAAAAA            CCGCACCC TTGCG GGGTGCGG            TTTTCGCGAGGCGCG 100 45
HR116_RS28215 6097486 .. 6097508 - -12.6  -2.72144   CCAGCCCGCTGAAAT           GGAGCGCGGC CAG GCCGGGCCCC           TACGTACGCCAGCGC  65 114
HR116_RS28205 6096407 .. 6096429 -  -9.9  -3.21416   CACCCCGATGACCAA          GGCGC-CTTG TCGA CAAGTGCGCC           GCCTGAGGCAACCGG  64 43
        thiS NONE
HR116_RS28195 6095226 .. 6095274 - -31.8  -3.64198   TTGCTAGAGACAGAA GGGCGGGCTGCCTGCCGGACGC TTCCC GCATCCGGCGGACAGCCCGCCC CAGGTAGTCGGTATC 100 39
        trmB NONE
HR116_RS28185 6092880 .. 6092930 - -10.4  -2.63102   AGTACCTGCAGATCA GCCCGGCGCCGGCGC-GCCTGGACG ACGA CGG-CACGCTACGC-GGCGCCGAGC TGATCGTCTGAGGGC  59 49
HR116_RS28120 NONE
HR116_RS28115 6080826 .. 6080849 - -18.2  -3.66178   CCCTGCAACTGGAAA          CCTCGGCCTG CGCC CAGGCCGAGG           AGCCGCTGGCCTACT 100 50
HR116_RS28105 6079368 .. 6079385 - -14.1   -4.7497   GCCACCCATGAAAAA             GCCCGCC GGAT GGCGGGC              TTCTCGCACCTGGCG 100 48
HR116_RS28100 NONE
HR116_RS28095 6076404 .. 6076421 - -14.1  -4.77036   TGCCACCACGAAAAA             GCCCGCC ATCC GGCGGGC              TTTTTCATCTTCGCG 100 215
        pilG 6069739 .. 6069752 -  -9.5  -3.35358   CGAAATAAGCATCAA               CGGCC ATGC GGCCG                GATATCAGGAAACGG  63 30
        pilH NONE
HR116_RS28045 6068724 .. 6068743 - -12.8  -2.79796   TTCCATGTCACGACA            CGGGCCGG CAGA CCGGCCCA             ACCGGTGAAGCTGTT  68 40
HR116_RS28040 NONE
HR116_RS28035 NONE
HR116_RS28030 NONE
HR116_RS28025 NONE
HR116_RS28020 NONE
HR116_RS28015 6055865 .. 6055888 -  -4.5  -3.09635   ATGGCGAGCATGTAA          CGACGACTCC GTGGT GG-GACGTCG          GATTATCCCGGCCGG  45 73
HR116_RS28010 6055198 .. 6055237 - -14.3  -3.55444   TCGGCACGTTCGAAA GCCTGCGCCAA-CGCCTGC TGCG GC-GGCGCCTGGCGCCGGC  CTGAGGCGCGTCTAC  85 37
HR116_RS27990 6049845 .. 6049869 -  -7.7  -5.46657   CAGGCTAAGAAAAAA          CCCCGGATTGC GCT GCGAACCGGGA          AGCGCAAGGCGCCGG 100 65
HR116_RS27985 NONE
HR116_RS27980 6048533 .. 6048550 - -14.1  -4.95876   AAGCACAATGAAAAA             CGCCGGC GATC GCCGGCG              TTTTTCGTTTCAGGT 100 47
        mexA 6046611 .. 6046624 -  -2.4  -3.53437   CTATCAATGAAAAAC               TTCG ACATTA CGAA                TCCCCTTGATCAGCC  47 35
        mexB NONE
        oprM 6041976 .. 6041995 -   -15  -5.67063   GCGAGGATAAAAAAA            CGCCGACC CTAG GGTCGGCG             TTCTTGCATGGCGCG 100 49
HR116_RS27930 6034863 .. 6034890 - -10.4  -3.34895   GCGATCCTGAAGCAA        GGGCATGGTGGG CACG CCCGCCTCGCCC         GGATGGACAGCGGCG  66 106
HR116_RS27925 6032658 .. 6032671 -  -5.9  -3.30441   GACGACTCCTCAGAA               GCGCG TCTG CACGC                TCAGCTCGAAGGTGC  52 6
HR116_RS27920 6031108 .. 6031158 -   -17   -3.4052   TGCGAATTCAACCAA GGCTACC-AGCAAATCCGGGCGT GCGGCG ACGCCCAGTCTTGCCAGGTAGCC CCTCTCAGCGACGCT  93 30
HR116_RS27915 6029947 .. 6029996 -  -4.7  -3.33815   ACTGTCGGGAATCAA CTTCGTCGCCAACCCGCTGGTGA ACAT CCACCTGCAGGGTCGCTTCGACG ACTACCCGAAGCGCC  49 487
HR116_RS27885 NONE
HR116_RS27880 6020070 .. 6020114 -  -8.4  -3.29511   CGTACCCGTGTAGAA GGCGGTCGATGCCGGCGCCTC GATG GAAGCGCCA-CTCAGGCCGCC AGGCGGCCGCCGGCG  60 16
HR116_RS27865 NONE
HR116_RS27860 6015660 .. 6015688 - -18.2  -3.34398   GGCTGTTCTGAAACA       CG-GCGGCCGGCA TGGG TGCCGGCCGCTCG        TCGCGCCGCTCAGGG  93 35
HR116_RS27850 NONE
HR116_RS27845 6011430 .. 6011480 -  -6.1  -2.80016   TCGCAGCATGAAGGA GCGT-CCCGGGA-GTGGATCGCCAC AGC ATAGCCATCCCGACCCCGGGCACGC ATGTCCCCGTGTCGC  46 76
HR116_RS27840 6010660 .. 6010689 - -12.2  -3.53444   TTGCTGAAGAAGGAA      CTGGCC-GGC-GCG CAGC CGCTGCCAGGCCAG       CCCTAGCGCGCGCCG  74 28
HR116_RS27825 6006254 .. 6006273 - -13.6   -5.4505   CCGGGCAATAAAAAA            CCCGGATG CTTC CATCCGGG             TTCTTCGGGCTGGGG 100 51
HR116_RS27820 6005239 .. 6005249 -  -2.4  -4.11216   GGTCGATCCGGAAAA                 GGAC CCG GACC                 TCTAGGATGGCCTGG  59 400
        clpG 6000573 .. 6000601 - -13.8  -3.16971   TCATGAGATATCGAA       CGCCCCGGCC-GC ATTC GCAGGCCGGGGTG        AGATTTCGACCGACC  76 73
HR116_RS27800 5999714 .. 5999767 - -19.7  -2.90194   ACCGGCCGAAGCACA CCCA-TCTCGTAGGGCGGATAACGCC GGG GGCGTTATTCGCCCTACCGGAGCGGG CAACGAATACCCGGG  93 227
HR116_RS27790 NONE
        creB 5997365 .. 5997386 -  -4.3  -2.50988   GTAGACCAGGAAGAT           CCGAACGCC GAGC GGCATCAGG            CGTGGTCCGGGCTGT  41 21
        creC 5995889 .. 5995903 -  -2.1  -2.73124   GGTGATGGCGGAAAG              TCTGCG GCGC CGC-GA               TGGCGGGCTTCGGGT  39 80
        creD 5994468 .. 5994488 - -15.4  -2.71712   TTCCTCCTTGGAAAT            CGGCGGCG GCCGG CGCCGCCG            CCCTCGTCGTCAGGC  78 35
HR116_RS27770 NONE
HR116_RS27765 5993658 .. 5993700 -  -9.7  -2.52464   TCCCCCGCGAAGGCA GCGCCCGCTGGCGACGC CTGACCATC GCCTCGCTGGCGGACGC CGTCCTCGACGCCGC  54 289
HR116_RS27750 5990937 .. 5990969 -  -6.2  -5.16572   ACCGAAGTGAAAAAA     GGCCAGTACGCAGGC AACC GCCTGCA-ACAGGCG      CCGCGCAACCAGGCC  90 525
HR116_RS27730 5986297 .. 5986328 -  -6.5  -3.87627   GGTCTATATAAAATA      TGCCCGGACGCTGG ATCCA CCAGCG-CCGCGAA      GGTCTTATCGAGGCG  65 92
HR116_RS27725 5985830 .. 5985847 -  -9.1  -2.63715   ACTCACGGCAGACGA             CCGGGCA AGCA TGCCCGA              GCCTCAGGGCAGATG  56 29
HR116_RS27720 5984957 .. 5984967 -  -8.2   -3.7108   AGCTGTACACCGAAA                 GCCG CGC CGGC                 GCCTATCACTACGCG  65 290
HR116_RS27705 5981560 .. 5981576 -  -9.4  -3.85698   GTCCTCGGTGAGAAA              CTGGCG GATAT CGCCAG              GCGCTATTCGCCCTA  74 83
        pcaD 5979698 .. 5979709 -  -5.8  -2.79312   AAAGCCGCGACGATA                GCCT AATC AGGC                 TGCGCCGAGAAAGCT  46 20
HR116_RS27690 5979196 .. 5979213 - -14.1  -4.42238   GCAGCGCAACGAAAA             GCCGCCC CGAG GGGCGGC              TTTTTCATTTCTTCG 100 30
HR116_RS27680 NONE
HR116_RS27675 5975492 .. 5975510 -  -2.5  -4.37092   AGGCTGCTCAGAAAA            CGAT-CAA ACCC TTGTATCG             CCCATGGATAAAGGC  62 212
HR116_RS27635 5968638 .. 5968677 -  -3.5  -4.44974   GGAAATGGCAGAAAA GC-TTGTCGCGAGGCTCGC CGAG GCGAGCGGCGCT-CAACGC  GGCGCCTTGATGCGG  67 19
HR116_RS27630 NONE
HR116_RS27625 5966964 .. 5966981 -  -3.3  -3.61178   GGCATGCATCTCAAA             CCTCCTGC GCG GC-GGCGG             TCCGCTCGGCGAGCC  51 3
HR116_RS27620 NONE
HR116_RS27615 5964936 .. 5964952 -  -6.6  -3.23853   CCCCTTCAACGAAGA              GTTCCA ACTAG TGGAAC              ACAGCAAAGACCAGG  53 185
        bioB 5961697 .. 5961715 -  -6.6  -3.33815   AGCGGCTGCAACGAA             GGGACGGC GGC ACCCTCCC             TTCCAGTATGGTCAG  55 37
        bioF NONE
HR116_RS27590 NONE
        bioC NONE
        bioD NONE
HR116_RS27575 5957818 .. 5957841 -    -3  -4.13014   GTGACAGTCGGAAAA          GGAAG-GGTCG GGG CGGCCGCTGCC          GGCCGCCAGGAAGTC  61 39
HR116_RS27570 5955651 .. 5955668 - -14.1   -4.7497   CGCAGGCATGAAAAA             GCCCGCC GAAG GGCGGGC              TCTTTCTCACCTGGG 100 67
HR116_RS27565 5953597 .. 5953613 - -10.8  -3.98661   GACAGGCATGAGAAA              GCCCGC TTTTC GCGGGC              TCGAGCGAGTTCGCC  82 113
HR116_RS27560 5951611 .. 5951627 - -15.1  -5.24129   GGCGCCCAGAAAAAA              GCCCCGC ATC GCGGGGC              TTTCCGTCTCAGGCG 100 48
HR116_RS27500 5941292 .. 5941344 -  -6.2  -3.75024   GGCGAGGATGAAGAA CCACATCGCCAGGT--CGCCGGGCAG GCG CCGCTCGACGGTATCAGGCGACATGG AGATCGACGATGTCC  60 13
HR116_RS27495 NONE
HR116_RS27490 5940454 .. 5940464 -  -2.4  -3.16564   CGGCGATTCTAGGAA                 GCGG CGG CGGC                 GAACCCGCTTGATGG  43 66
HR116_RS27485 NONE
HR116_RS27480 NONE
HR116_RS27475 5936568 .. 5936592 -  -9.2  -3.72695   ATTGCCTCCATGAAA          CCGAAGGCGC GGAAA GCGCCTGCGA          ACAGTGCGGCATGCC  68 171
HR116_RS27455 NONE
HR116_RS27450 NONE
HR116_RS27445 NONE
HR116_RS27440 5931548 .. 5931582 -  -3.6  -5.88565   CCTAGAATAAAAAAA    GCGCCCCACAGGAC CAAAACGAC GTCC-G-GAGGCGC    ATGCGAGGACAGAGG 100 55
HR116_RS27430 5929301 .. 5929321 -  -8.1    -3.695   GGCAAATATTCGAAA            GGAGGCGGG AAG CCCCCCGCC            AGAGCGAAACTGGCG  69 202
HR116_RS27425 NONE
HR116_RS27420 5927167 .. 5927188 - -17.3  -4.25104   CGCTGGTGACGAAAA           GCCCGAGGC CTGT GCCTCGGGC            TTTTTTCATCGGTCG 100 136
HR116_RS27400 5923832 .. 5923842 -  -2.4  -3.19246   GGAACTGCAACTCAA                 GCTG GCG CCGC                 TCGTTCTGTAAAGGC  43 50
HR116_RS27395 5923332 .. 5923350 -   -16  -3.09516   GGGTCGATCACGGAA             GCGGCGGA TTA TCCGCCGC             CACCGCCGATTGATC  84 86
HR116_RS27390 5922622 .. 5922636 - -11.4  -4.20749   GAAGAGGCCAAGAAA               GGCCTG GAA CAGGCC               CAGGCGCAGTAGGAC  84 229
HR116_RS27380 5920527 .. 5920561 -  -8.6  -4.08216   CCACTTCCTGGAAAA     CGACGAAGCGCG GATCGGCCCGG CGCGCTTCCTCG     GCGCCACCCTGTGGA  72 475
HR116_RS27370 5918718 .. 5918735 - -14.1  -4.83169   ACCGCGCGATAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTCCTTTCCGGC 100 45
         tkt NONE
HR116_RS27350 5912780 .. 5912822 -  -4.8  -3.31461   GACCTACCTCGACAA CCTC-GCCCATGCCGCCCGCG AAGC CGCCGGCG-C-CGGGCTGACG GTGCTCATAGAGCCG  49 387
         epd NONE
HR116_RS27335 5909919 .. 5909929 -  -2.4  -3.53012   TTCGTCGTCCTCAAA                 GGTG TGC CCCC                 CGAGGACGGCGAATG  47 57
HR116_RS27330 5909685 .. 5909695 -  -2.4  -4.41241   GAAACTGGCAGAAAA                 GCAC TAC GGGC                 ATTCCACCGGCTTTT  65 18
HR116_RS27325 5909112 .. 5909130 - -11.7  -3.36878   TTCAGTGATTCAGAA             GCCTGCC GCAGG GGCAGGC             CCGGTTCAAGTTCCT  72 82
         fba 5907966 .. 5907982 - -10.8  -3.04144   GGCGGATGTGCAAGA              GCCCCG ACCAG CGGGGC              TCCCGTTCGAACGAA  66 46
HR116_RS27315 5906981 .. 5907004 -  -2.2  -4.15833   ACGACCAGGGTAAAA          GCATCCCGGC ACAC GCCGGCGTCC           CCCGCCACAACCAGG  59 476
HR116_RS27305 5905648 .. 5905662 -  -4.2  -3.36289   CACGACGCCAACGAA               TGGCTG GCG CAGCAA               CAGCGCGAGCGTCCC  49 394
HR116_RS27295 5904054 .. 5904095 - -12.1   -2.7535   TGGTGGAAGACAGCA GCACCGGCACCCGCGCCGC CCTC GCCGCGGGGATGCGGGTGA  TCGGCTTCGTCGGCG  65 185
HR116_RS27275 5901310 .. 5901331 -  -2.9  -3.33261   CTGGAACCTGTACAA           CTATGCCGCC CAC GGCGACG-AG           GCGTTGTCGCCGAGT  46 219
HR116_RS27265 5900470 .. 5900497 -  -8.4  -3.09933   CTGGAACGGATCGAA        CCGGG-CGAGC TGATCGT GCCCGACCCGG        AACAGGGCGACGAAG  56 202
HR116_RS27235 5895144 .. 5895166 - -10.6  -3.53012   TCTTCGTGCTGGAAA           CGGCAGGT TTCCAGC ACCTGCCG           ATAGGTCTCTACCGT  70 409
        tsaD 5883103 .. 5883124 -  -3.5  -2.52676   CACCGCGCCAACTTA           CGCGATCTG TTCG CCGGCCGCG            AACGGCATTTCTAAT  39 118
        folB NONE
        folK 5881310 .. 5881330 - -10.3  -2.82516   TGGGCGAGTACCACA            CCCACGCCC ATC GGGCGCTGG            AGCTGCGCCCGAATA  59 294
HR116_RS27105 NONE
HR116_RS27100 NONE
HR116_RS27095 5864216 .. 5864226 -  -2.4  -3.66178   GTGCCGAAGCTGAAA                 CTGG CGA CCGG                 CGACTTCTATTACCG  51 237
HR116_RS27085 NONE
HR116_RS27080 5860135 .. 5860152 -  -2.5  -4.25848   AAGCCGCGAGCAAAA             CCTGGGC GAAC GCCCCTG              TCAGAGCAGGCGGTG  62 26
HR116_RS27075 5858947 .. 5858983 - -10.2  -3.97088   TTCGAGAAGAGCAAA   GGTTTGCGCGCCAGC GCTCTCCG GCTGGCGCGCAA-CG    GCCTCCTCAGCGCTT  78 32
        potA NONE
HR116_RS27065 5856477 .. 5856526 -  -8.3  -3.55444   GGGCGACCCTGGAAA GTGTGGAACGGTAGGAGGAGCCGC CGC GCGGCGGCCCCT-CCGGCCCTCTC TGGAGGGTCAGGCGA  65 44
HR116_RS27060 NONE
HR116_RS27055 5854228 .. 5854251 -  -8.1  -3.14564   CGACGCCCGGACCAA          GCCG-GGCGC GCCCT GCGCCTCAGC          CGCCGGGTTGTGCGG  58 21
         rpe NONE
HR116_RS27045 5852601 .. 5852623 -  -6.9  -3.57615   TCAACAGGGTGCAAA          CGCGCGCCGG CTAT CCGGCG-GAG           GATGATGTCAGGCGC  59 33
HR116_RS27040 5851029 .. 5851054 - -16.9  -5.24129   GCCGGGCACAAAAAA         GGCGGATGACG CAAA CGCCATCCGCC          TTCTTTTCTTCCGCC 100 51
HR116_RS27025 NONE
HR116_RS27020 5848457 .. 5848472 -  -7.5  -5.65177   ACAGGCATAAAAAAA              CCGGC TCGAAG GCCGG               TTGGAAAATTCCAGG 100 67
HR116_RS27015 NONE
HR116_RS27010 NONE
HR116_RS27005 5846548 .. 5846565 - -14.1  -4.54727   CTCCGCAAACGAAAA             GGCCCGC TCGC GCGGGCC              GGTTGAATGTTCGAC 100 71
HR116_RS27000 NONE
HR116_RS26995 NONE
HR116_RS26990 NONE
HR116_RS26985 NONE
HR116_RS26980 5842149 .. 5842165 - -10.8  -4.90266   TCCATTAATGAAAAA              CCCCGC ACAAG GCGGGG              TTCAGGGGGTGATGA 100 27
HR116_RS26975 NONE
HR116_RS26970 NONE
HR116_RS26965 5839973 .. 5840009 - -17.1  -2.75712   GGACCTACTGAAGTA    GCGCGGGCGCCGCTCGC CTG GCGGACGGCGCCGTCGC    TCACTCCTCGCCCTC  84 105
HR116_RS26960 NONE
HR116_RS26955 NONE
HR116_RS26950 5836585 .. 5836600 - -11.8  -5.54907   TCCAGAAAAGAAAAA              CCCCGC CAAG GCGGGG               TTGCGGGTGAGCGGT 100 44
HR116_RS26945 NONE
HR116_RS26940 5834881 .. 5834914 -  -2.3  -3.23692   CAGCAGGACCAGCAA     CACG-GCCGGCAGG AGCAGAG CGAGCCGGCTCATG     ACAGCACCGCCCTGG  43 21
HR116_RS26935 NONE
HR116_RS26930 5834124 .. 5834143 - -12.1  -5.00138   GATGCAAACGAAAAA            GCCCGGC ACACGG GCCGGGC             TCTGAGGTTGCAGGT 100 179
HR116_RS26925 NONE
HR116_RS26920 5833113 .. 5833126 -  -3.7  -3.53761   CAAGTTCGTGCCAAA               CCTCG TCGG CGGGG                GTCAGTTTTTTTCCG  51 27
HR116_RS26915 5832819 .. 5832838 -  -9.2  -4.82901   TGTCTTCCAGAAAAA            GACCCCGC CGCA GCGGGGTG             GCCTGTCATGCCCAT 100 31
HR116_RS26910 NONE
HR116_RS26905 NONE
HR116_RS26900 NONE
HR116_RS26895 5829117 .. 5829131 -  -4.2  -3.01712   TTCCTCTCGTGAAGA               GCCG ATTCCGA CGGC               TCGCTTGAATATGTC  45 43
HR116_RS26890 5828456 .. 5828474 -  -7.3  -5.47218   CTTCAGGCAAAAAAA             CGCCCGC GCATG GCGGGCC             TGTTACGGCGTTGCC 100 43
HR116_RS26885 5824458 .. 5824478 -  -7.5  -3.91897   TGCCGTATTTACAAA            GCTGTCGTC AAT AACGACCGC            CCCGCTTGGATTTCT  68 327
HR116_RS26880 NONE
HR116_RS26875 NONE
HR116_RS26870 5821964 .. 5821984 -  -5.4  -4.40561   GCCGGCGAAAAAGAA           GTCAGGCGC GCCA GCGCC-AAC            GGGCGAATGCCTTGA  71 254
HR116_RS26865 NONE
        trpD NONE
        trpC 5819247 .. 5819293 - -21.9  -3.02511   GGCACCCGCTGAACA GCA-CCCATGAAAAAGGCCGGT CGCA ACCGGCCTTTTTCATGGGGTTC GACAGCGCGGATCAG 100 37
HR116_RS26845 5817799 .. 5817826 -  -9.8  -3.17194   ATCTTCCGAACTGAA        CG-GCCGCCCGAC GGA ATCGCGCGGCACG        AAAAAAGGGGCGCAT  64 104
        speD 5816754 .. 5816770 - -13.7   -4.7497   CGCACGCATGAAAAA              GCCCGCT CGA AGCGGGC              TTTTTCTTTCTCGTG 100 46
HR116_RS26825 5813764 .. 5813795 -    -2  -3.85389   CGGGAAGAACTGAAA      GGGCGCGGCGTCAA GGTC TCGGTGCTGTGCCC       TGGGCCAACCCGTAC  54 321
HR116_RS26800 NONE
HR116_RS26795 NONE
HR116_RS26790 NONE
        erpA 5807639 .. 5807672 - -22.6  -3.53444   GTATCCCGCCTGAAA     CGAAAACGCCGCGC ATATAA GCGCGGCGTTTTCG      TAGCGGCCCCATCGA 100 43
HR116_RS26770 5803248 .. 5803265 -  -2.6  -4.82548   TAAAAAGAGATAAAA             CTCTCG AATTCA CGAGTG              TTACTTGCGCTGCTG  74 475
HR116_RS26765 NONE
HR116_RS26760 5801493 .. 5801503 -  -5.4  -2.81464   GGATCACGCAGCACA                 CCAA CAA TTGG                 TGGGTCTGGGCAGAT  44 23
HR116_RS26755 5801338 .. 5801375 - -10.1  -3.34398   GTTCTGGTGCAAAGA   CCAGAAATCAATGTTCA TCCA CGAACATTCATTTCTGA    GCTTTCGACGATTGT  66 47
HR116_RS26750 5798250 .. 5798271 -  -5.9  -3.33162   GACTTCACCTTACAA           CACACAATC ATCA GATTGTTTG            GGTGTTATATGGTCA  52 20
         rrf 5797978 .. 5798013 -   -17  -4.07568   TTTCCGCGCGCAAAA    GCAAAACCCCCGGTCA TCGC TGACCAGGGGTTTTGG     GATAGGAGCTTGACG 100 33
HR116_RS26740 5796924 .. 5796938 -  -2.8  -2.94045   CGAGCTCAAGAATCA               TTGACG CAA CCTCAA               ACTAAGCTCCCCTCC  42 8
HR116_RS26735 NONE
HR116_RS26730 5795364 .. 5795380 -  -4.5  -3.01791   ACCTTGCTGTCAAGA              GTTTTCT CTT AAAAAAC              CTGAACTTAGGTTTC  45 110
HR116_RS26725 NONE
HR116_RS26720 5795120 .. 5795130 -  -5.4  -3.43109   TACATGAGCGAAACA                 CAAG CAA CTTG                 ACTGGAGCGGGTAGC  53 27
HR116_RS26715 5795005 .. 5795028 -   -14  -3.85864   CTACCATTAGAACAA          GGGCAGATAT TTTC ATATCTGCCC           CTGGATAAATGGAGC  86 35
         tuf 5793714 .. 5793739 - -12.6   -4.4078   TGGCCTGAAGCAAAA         TCAGGCCGAC CATTAT GCCGGCCTGA          GAGGGGAAGATCAAC 100 46
HR116_RS26705 5793608 .. 5793632 - -11.5  -4.63486   ATCTCGTGAAGAAAA          GCCAGATTTAC TTG GGAAATCTGGC          AGGCCAGGAGGGAAT  95 22
        secE NONE
        nusG 5792631 .. 5792653 - -20.6   -4.4767   CCAGTGACGACAAAA           CCCCGCAGCC TTG GGCTGCGGGG           TGAGGGATGCGTTTT 100 44
        rplK NONE
        rplA 5791393 .. 5791422 - -12.9  -3.06492   GCAGGGACCCCAATA       CCTGTGCAGCGGGC AGA ACCCGCTGCAC-GA       TTTCACTTAGGCTTC  71 32
        rplJ NONE
        rplL 5790213 .. 5790236 -   -16  -4.78149   CCCAGAACGGAAAAA          GGCCGGTGGC AAAA GCCACCAGCC           ATCAGCCTTTCGCTT 100 72
        rpoB NONE
        rpoC 5781684 .. 5781709 - -19.1  -4.19624   CACCGTCAAGACAAA         GCCCCGGCTAT CGGG ATAGCCGGGGC          TTGTCGTTGATGCTT 100 39
        rpsL 5781146 .. 5781162 -  -2.2  -3.27475   CCCGGGACCATAACA              GTCAAG TTACG CCCGAC              CTTACTCTTATCGAC  45 63
        rpsG NONE
        fusA 5778458 .. 5778472 -  -2.1   -3.8647   AGCCACGACAGTAAA               CCTCT TACTT AAAGG               GCTGAATCAACCTTG  54 32
         tuf 5777214 .. 5777231 - -14.1  -5.32565   CAACGAACGAAAAAA             GGGGCCC CGGA GGGCCCC              TTTTCTGATGGCAGG 100 49
        rpsJ 5776772 .. 5776790 -  -9.6  -2.63301   CAGAGCGTTACACGA             CCAATGCC GAA GGCATTAG             CCGAGGCTGATCTGT  56 22
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 5770432 .. 5770461 - -20.9  -4.16279   GAGATCACGCCAAAA       CGAATCAAGCCCC ATGA GGGGCTTGATTCG        ATGTCGCGATCAACG 100 70
        rpsH 5769934 .. 5769944 -  -6.8  -3.17146   TCCCCTTAGAACACA                 GTGC AGA GCAC                 TTCGCCGCCAACACC  53 5
        rplF NONE
        rplR 5769021 .. 5769032 -  -2.2  -2.59431   GTTTGCCATAACTTA                GAAC TCCA GTCC                 GCCTTCACGAGCGGC  38 11
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        rpmJ 5766379 .. 5766402 - -15.3  -3.64441   ATAGCAAATAATCAA          CCCGGCAGC ACACTA GCTGCCGGG           TTATCACGCGTGGAT  86 46
        rpsM NONE
        rpsK NONE
        rpsD NONE
        rpoA NONE
        rplQ 5763398 .. 5763413 - -11.8   -5.8187   CAGGTAATAAAAAAA              CCGGGC CTAG GCCCGG               TTTCTTGTGCAGCAG 100 46
HR116_RS26500 5761663 .. 5761684 - -15.9  -5.38951   AATGCAGATAAAAAA           GCCCCCTTC CTAG GAAGGGGGC            CGGGGGCCTCATCAG 100 45
         bfr 5761059 .. 5761085 - -15.9  -4.72272   GGCGCTCATGAAAAA        GCCCCTGCGGCC GTGA GGC-GCAGGGGC         TTTTTCGTATCCGCG 100 49
HR116_RS26485 NONE
         ssb 5755999 .. 5756038 -   -28  -4.07568   GGCGTCGCCTGAAAA  CGAAGACCCCCTGCGGCC CGAG GGCGGCAGGGGGTCTTCG   AAGGTCTGCCCGTGG 100 71
HR116_RS26455 NONE
HR116_RS26450 NONE
HR116_RS26445 NONE
HR116_RS26440 NONE
HR116_RS26435 NONE
HR116_RS26430 NONE
HR116_RS26425 5734097 .. 5734107 -  -4.6  -3.40403   GGCGCGGCATCAGAA                 CGCG CCC CGCA                 GGCTGACGTTGAAGC  53 9
HR116_RS26420 5733795 .. 5733821 -  -2.2  -2.84812   AGCGAGAGCAGGAGA        GGACGC-GCCG CCACTT CAACCGCGCCC         CGCCAGCAGCCACAA  40 14
HR116_RS26415 NONE
HR116_RS26410 5730809 .. 5730829 -  -3.2  -3.82084   CGCGAATACGAAGAA           GCGCGGCGG CCGA CCGCCA-AC            AAGATCATCCTGGCC  56 262
HR116_RS26365 5721318 .. 5721367 -  -6.1  -3.35371   GAGATCGCCAACGAA CGCTACCGCGCCGGCGCCGGCAG CTAC CTGGCGGTGCTGGAGAACCAGCG CGCGCTGTACCAGAT  55 193
HR116_RS26330 5711473 .. 5711488 -  -3.9  -3.05384   GTCGCGCGCAGCGAA              CGGCC TCCCTC AGCCG               CGCAGTTCCTCGACC  45 19
HR116_RS26325 5710314 .. 5710342 - -18.8  -2.78798   AGGCCTGAGCGAAAG        GCGCGGCCCGCC CCGGC GGCGGGCCGCGG        GAATCAGGAACGCGC  87 29
HR116_RS26305 NONE
HR116_RS26300 5702480 .. 5702500 -  -5.5  -3.55815   AAACATCCGGTGAAA            TATGGTTTT CAT ATAACCATA            TGAGATATCAAACTA  57 77
HR116_RS26295 5701488 .. 5701504 -  -2.1  -3.66803   CTCGAACATGGGAAA              GGCGCAC GCT GTCCGCG              AGGACTCACAGGGGA  49 87
HR116_RS26290 NONE
HR116_RS26285 NONE
HR116_RS26280 NONE
HR116_RS26275 5698009 .. 5698060 -    -8  -3.21912   CGGCCAAGGCATGAA CCTGGCCA--TCGAGGACGCCAGC GCCCTG GCCGACGCCCTCGACCTGGCCTTG CGCGACGCCTGCGCG  56 294
HR116_RS26240 NONE
HR116_RS26235 5688539 .. 5688555 -  -7.2  -4.09685   GCTGAGCCCGGAAAA              GGGCGC GCAAG GCACCC              TGGAAGCCCATGTCG  67 508
HR116_RS26220 5685682 .. 5685702 - -13.9  -2.52464   TCGCGCCGGAACGCA            CGCCGGCGC GAC GCTCCGGCG            GTTCAGACCGCCAGG  71 28
HR116_RS26200 5682364 .. 5682374 -  -8.2  -3.30243   AGGTAGGGCGCATAA                 CGCC AAC GGCG                 TTATCCGCCGTCTAT  60 112
HR116_RS26185 5678306 .. 5678330 -  -4.2  -4.56597   CCGCTCCTGGAAAAA         GGACGCCCTGC TCCA GCCGGA-GTCC          CGCGAGTGCTTCGAG  70 330
HR116_RS26165 5675479 .. 5675491 -  -4.1  -3.68222   GCTGAACTTCAACAA                CCTGT TCG ACAAG                TACTATTACAGCGGC  54 174
        dkgB 5671880 .. 5671894 -  -3.4  -3.78022   GGCATACCCAGGAAA               GCAACC ACA GGGCGC               AGCGCCTGTACGACT  56 137
HR116_RS26145 5669476 .. 5669510 - -17.1  -2.88134   GCAAGCAAGTGAAAG     GCGCGGGCGGAAGGC TTCGC GTCTTGCGCCCGCGC     TGTTCCGTTCAAGGG  87 391
HR116_RS26115 5664489 .. 5664525 -  -6.5  -3.21099   GGCCGCGACCAGCAA   CGTCGCCGCCGCCAAT GCCGGG ATCGGCCTCGGCG-CG    CTACTTGGCGGAGAG  51 159
HR116_RS26100 5661143 .. 5661153 -  -2.4  -3.01712   CCGGCTCGCTGAACA                 CCCG GAC CTGG                 TCGCACGTCGTCCCG  41 455
HR116_RS26080 5657372 .. 5657399 -  -5.4  -3.27298   GCGCGCAAGCAGCAA        CCGGCGCACTTC CGCG GCAGCCCGCCGA         GCCGCGCGCTGCTCG  51 289
HR116_RS26070 NONE
HR116_RS26065 5653018 .. 5653028 -  -6.8  -2.53995   ATCTACGCCAAGGCA                 GAGG CTC CCTC                 GCCTGTACCACGCCC  48 150
HR116_RS26060 5651995 .. 5652013 - -13.1  -2.87132   CGCGCTTGCGACACA             GCCCCGC GGCCG GCGGGGC             TTGCTTTACGAAACG  70 60
HR116_RS26025 NONE
HR116_RS26020 5642353 .. 5642378 -  -6.1  -2.78384   TCGCCTGCGACGACA         GCCGCCA-CGAC ATC ATCGGCGACGGC         ATCGACATCGCCTTC  47 486
HR116_RS25980 5631600 .. 5631621 -  -8.6  -3.03771   CGACAGCGGCGAAGA           CGGCGCGG CGATCT CCGGGCCG            GTGGACAATCGCAAC  55 504
HR116_RS25970 5629242 .. 5629258 -  -2.1  -4.00868   GTATGCAGAAGGAAA              TCAACGG TTT CCGCCGT              GCAGGGCCAAGCCCA  57 9
        hpaR 5628707 .. 5628727 - -14.7  -2.87622   CACTGGGACAAGAAT            TGGCCGGCA TGA CGCCGGCCA            GTCGCTTCAGGGCTT  77 32
HR116_RS25940 NONE
HR116_RS25935 5620773 .. 5620786 -  -3.7  -4.11216   GGTCCAGGTGGAAAA               CCTGG AGGG CCTGG                CCAACCTCGACGCGA  61 442
        hpaA NONE
  aph(3')-II 5611651 .. 5611676 -  -3.1  -4.63932   GAGCCGTCAAGAAAA         GACGCGATGGC GGGT GCCGTCGTACC          CCGTTTCCGTGCAAA  69 80
HR116_RS25860 5605656 .. 5605681 - -17.6  -4.21462   ACGCACGACGGAAAA         CGCCCCGGAC GCAAGG GTCCGGGGCG          GCGATGTGCGTTGGA 100 84
HR116_RS25855 5604351 .. 5604369 -  -6.7  -2.59154   GAAGACTAGATCAAG            CGGGCGGA TTCC TCCGCC-G             AATCATCCGACCCCA  48 52
HR116_RS25850 5599651 .. 5599677 -  -8.7  -3.73647   CGCATGGAGGAACAA        CTGGGC-ATCCG CCTG CGGATCGCCCCG         GCCTTCGGCGAGGTG  65 363
HR116_RS25835 5596780 .. 5596804 - -11.5  -3.26449   CTGGAGACAATCGAA          GAGCACAGC AGAAATG GCTGTGCTC          CATCCAAAGCGCTGC  69 377
HR116_RS25820 5594504 .. 5594547 - -23.2  -3.55071   GGATAGCTCCGGAAA CGGCGACGCCCCCGCTTTCC CAGG GGAAAGAGAGGGCGCCGCCA GGGTGTGGAAAGGCT 100 40
HR116_RS25815 5593493 .. 5593510 -  -8.3  -2.70932   GCTGCTCGCCAAGCA             GCCCGCG CAAG CGCGGGA              AGCCGCTGGCAAGGA  54 172
HR116_RS25785 5588614 .. 5588647 -  -9.5  -3.30441   CATGATCGGCGAGAA     GGCCGCCGACCTG ATCCTCGG CAAGCCGGCGCCC      CATGCACCGCCCGCG  61 77
HR116_RS25750 NONE
HR116_RS25745 5579582 .. 5579592 -  -8.2  -3.23216   CGTGATCACCAGCAA                 CGGC CCG GCCG                 GACGCTGCGGGATCA  58 508
HR116_RS25710 NONE
HR116_RS25705 5572272 .. 5572303 - -10.9  -3.07994   GCGAATCGCAGGGAA      CGAACGGCGATCC CTCCCT GCATCGCCATTCG       CAACAGGGCGACCTG  66 167
HR116_RS25700 NONE
HR116_RS25695 5568760 .. 5568780 - -10.4  -3.64703   CTTCCTCCAGTGAAA            CCCCGCGA CCTAT TCGCAGGG            CCGTGCTACGGCAGG  70 70
HR116_RS25690 5565612 .. 5565638 - -11.5  -3.01712   TGCGCCTGCGGAAGA         GGGCCACACTC CAGGC GAGAGCGGCCC         CGGCCGGGAAGGGAG  66 68
HR116_RS25685 5564421 .. 5564437 - -13.7  -3.54935   GAAACGCCGGGGAAA              GAGCGGC GGC GCCGCTC              AGGGGAAGGTAAACG  81 24
HR116_RS25680 5562626 .. 5562669 - -10.2  -3.35813   GGCGACCTCAACCAA CGCGACTGCGCCGAACGCATC GGC GAGGCGCTGGGCG-AGCGGCG GATCGATCGCCTGAT  65 503
HR116_RS25655 5557607 .. 5557628 -  -7.2  -3.01791   ACCTGTTCCGCAAGA           CCGGCGCG CGCAGC CGCACCGA            GCTGGTGAAGCGACT  54 47
HR116_RS25645 5555210 .. 5555229 -  -4.9  -4.63218   GCGTGTCGAACAAAA            GGCTGCC GCGGAG GGCAGCG             AAAGAGCCGAACGAA  74 65
HR116_RS25640 NONE
HR116_RS25635 5553072 .. 5553082 -  -6.8  -3.86897   TTCAGGCGGGAGAAA                 GCAG GCG CTGC                 AATTGGGCGAAGGCG  65 1
        feaR 5551714 .. 5551732 -  -4.4  -3.12505   ATCTGATAGTGAATA             GCGACGCG GCG CACGCCCC             AAGGCAATGACATCC  47 240
HR116_RS25625 NONE
HR116_RS25620 5549472 .. 5549487 - -11.8  -4.19238   CCCCCAACGGGAAAA              GGCGCC TTCG GGCGCC               TTTTTTCATCCTGTG  86 410
HR116_RS25585 5544667 .. 5544703 -  -9.3  -3.07962   GTGCAGAGCTGAAGA    GCCGTCTGGCCGCCG ATGCCGG CGACGACGAGGCGGC    CTACCAGTTGGCCGT  59 249
        nrdR NONE
        ribD 5540743 .. 5540765 -  -3.5  -3.27661   AAGACATATGACGAA          CTCCTGTTTC GTGA AAAACAGG-G           CTTTTTGGATCGAAG  46 324
HR116_RS25555 NONE
        ribB 5538759 .. 5538783 - -11.4  -3.35597   CTCATCTGTTAAAGA         GC-CGGGACGC CGTT GCGCCCCGAGC          GAAAAGGGTCGAAAG  69 95
        ribE NONE
        nusB 5537760 .. 5537781 -  -3.5  -2.53382   ATCAGCTCGAACTCA           CCCATGACG CCGC CGGCGCGGG            ATCAGCGCTTGCCGC  39 27
        thiL NONE
HR116_RS25530 NONE
HR116_RS25525 NONE
HR116_RS25520 NONE
        ribA 5534100 .. 5534145 -  -6.7  -2.72344   CGCCAGTTGCAACCA CCAGGCACGTC-CCAGCGCGCC GCG GGCTTGCTGGCGACTCACGTGG TTTCCGCCTCGCCCT  49 18
HR116_RS25510 5533717 .. 5533739 -  -8.4  -2.85216   GAGCAGCCAGAACGA           GCGCATCAAC CGA GTTGACGCGG           AATACGGTAGAGCCA  55 8
HR116_RS25505 5532820 .. 5532848 - -17.5  -2.62656   AAACCCAGCGACAAC        GGCGGATAACCGC GTT GCGGTTATTCGCC        CTACCCCCCAATTGC  83 102
HR116_RS25485 5528297 .. 5528313 - -11.5   -4.4009   CCCCACCCCAGAAAA              GCCGGCC ACA AGCCGGC              TTTTTTAATGCCTCC  95 67
HR116_RS25440 5517467 .. 5517484 - -14.1  -4.17048   CCTCGCCGAAAAGAA             GCCCCGC AGCC GCGGGGC              TTTTTCATTCTCCCT  93 79
HR116_RS25420 5513428 .. 5513438 -  -8.2  -3.39908   GGTGCCGAAAAGACA                 CGCC CGC GGCG                 CCGCCCTTGCCGCCA  63 151
HR116_RS25385 5504308 .. 5504346 - -17.2  -2.78384   CGTCGCGGCATCAGA   CGACGCGGCGTCGGCGGG GTT CCCGCCGGCCTCGCGGCG   GCCCGCCTGGAGCCG  84 50
         mpl NONE
HR116_RS25375 NONE
HR116_RS25370 5501432 .. 5501455 -    -8  -2.57132   CCGCGGCTGGACAAC          CCGGTCGGCC CGCT GGCCGAGCTG           CTGCCGCAACTCAAC  50 513
HR116_RS25350 NONE
HR116_RS25345 NONE
HR116_RS25340 5496684 .. 5496698 -  -2.7  -3.14931   GCCAGCCGCCAGCAA               CCGCC GCGCT GGCGC               CTGACCTGGGTACTG  44 309
HR116_RS25325 5494017 .. 5494029 -  -4.7  -2.71924   GAGGTCGCCTGAAAG                GCGGC TAT GCCGT                GCGGCTTTCGATCAC  44 17
HR116_RS25315 NONE
        nadD NONE
        rsfS NONE
        rlmH NONE
        mrdA 5487700 .. 5487750 -  -4.5  -2.66692   CAGCAGCAGGAGAAT CCCGTCGATGTGCAGGCGCTGCAG CAGG CTGGCGCGCCGGCGCATC-ACGTC TTCGTTGGACAGGGT  41 51
        rodA NONE
        mltB NONE
HR116_RS25280 5484552 .. 5484563 -  -5.8     -3.94   CCAATGGTCAAACAA                TCCC TTGC GGGA                 ATTCCCTGCGTGAGT  62 47
HR116_RS25275 NONE
HR116_RS25270 5483012 .. 5483022 -  -6.8  -2.79183   TCGAGTCCCATCAGA                 GCAC CAT GTGC                 ACGCGTCCGGTCGCG  49 10
        lipB NONE
        lipA 5481321 .. 5481348 - -22.8   -4.8622   CTGCCCAATGAAAAA        CGCCGCGTCCCT GTGC AGGGACGCGGCG         TCGGAAGGCATTGGC 100 51
HR116_RS25250 5479302 .. 5479312 -  -8.2  -3.30124   TCGTAGGGCGGATAA                 CGCC ATG GGCG                 TTATCCGCCGCTGCG  60 52
HR116_RS25215 5472071 .. 5472083 -  -2.6  -3.34894   AACTTCCCGGAAAGA                GACC CTAGC GGCC                GTTGCCCGAACGGAA  45 17
HR116_RS25210 5471213 .. 5471233 - -15.4  -2.87132   CCCCTCCTGGATAGA            CCGGCGCC CCTGC GGCGCCGG            TTGCGTCTCAGCGGT  79 33
HR116_RS25180 5464739 .. 5464766 -  -9.9  -2.76696   CCGTTCCCGAAGAAT        TGC-AGCAGGCG CTCGC CGCCTGCCAGCA        GGTCGCCAATGGCGG  57 429
HR116_RS25155 5458971 .. 5458993 -  -8.4  -2.75064   TTTCCCAGTGAATCA           CGCTTCAGGC TTT GCCTAAAGAG           ACATACAGGTCGCGC  54 73
HR116_RS25150 NONE
HR116_RS25145 NONE
HR116_RS25140 5456117 .. 5456139 -  -2.1  -3.69216   TTCGCATGGAAAACA          TCTTGCCTGT ACCG ACAGG-AAAA           CACAGCGCTTTTCTC  52 49
         amn 5454569 .. 5454604 - -24.8  -3.33261   CCGCAAGGCGTAGAA    GCGCGCCGCGGTTTCC GCAC GGAAACCGCGGCGCGT     CCGATCAACGGAACG 100 30
HR116_RS25130 5453854 .. 5453896 -  -4.9  -3.57144   TTCGGCACGCCGAAA CCCG-GCGAGCAGTGGCGCG TCGCAC CGCGCAAC-G-TCGCTCAGG AGGCCGAGGCCACCA  52 21
HR116_RS25120 5451921 .. 5451956 - -10.2   -3.2614   CATGTCCGACAGCAA    GCTGCGCGCACTCGGC GCCA GCCATTCGCGCGCCGC     GCTGGATATCCGCCC  63 210
HR116_RS25100 5449560 .. 5449573 -  -2.3  -3.90112   TGGTCGGCAAGGAAA               CCGTC AGTT GACGC                TGTAGCCGCGCCCGC  54 15
HR116_RS25085 NONE
        hrpB 5444694 .. 5444721 -    -2  -5.06414   GTGGCCGAAGAAAAA        CTCAACCCAC TGTCCGGG ATGGGTTGAC         CACTACAAAGCTCCA  77 300
HR116_RS25035 5432046 .. 5432082 -  -4.1  -3.25823   CTTCGCCGACAGCAA    GGCCCAGGTCGACGCCT TCC ACGCCGCGGCCCTGGCC    GCCGGCGCACGCGAC  47 185
HR116_RS25010 5428358 .. 5428370 -  -3.3   -4.1822   GGTCAGGTGAACAAA                TCGTC GTC GCCGA                GGAAGCTGGAGTCGT  61 0
HR116_RS25005 5427723 .. 5427748 -    -4   -2.5366   GGAAAAAAGGAAACG         GACGGC-ATTC TAGCG GATTCGCCGTC         TCCCATCGTCCTCTG  41 53
HR116_RS25000 5426037 .. 5426081 -  -9.7  -2.52464   TCCTGCGTGAACTCA CCCCCGCCGCCACCTATGCCG AGC CGGCCCTCCTGGCGGCGGCGA TCAAGCGCCTGCCGC  54 293
HR116_RS24985 5422645 .. 5422657 -  -6.2  -4.08485   TGTATGGAAAGGAAA                CGCG TCCGG CGCG                AGGCCCGGCGTTCGG  65 71
HR116_RS24980 5418859 .. 5418870 -  -2.2  -4.07687   AGGCTCCGCGGAAAA                GGCT CCCC AACC                 GGAGTGTAGTCTTTT  57 118
HR116_RS24975 NONE
HR116_RS24970 NONE
HR116_RS24965 NONE
        tesB NONE
HR116_RS24955 5414375 .. 5414398 - -13.2  -5.14965   ATGCGCAGGAAAAAA          GCGCAGG-AGC CTG GCTTCCTGCGC          TTTTTTCGTTTTCGG 100 86
HR116_RS24945 5412581 .. 5412610 -  -7.1  -3.06133   GAACCTCGGAGGCAA       CGGTGCCGCGCTCC GGA GGAGAACGG-ACCA       GGGACGGGCAATGGG  51 180
        tauA 5411510 .. 5411539 - -21.5   -4.1822   CCGTAGGGTAAGAAA       GCCTCCGCTCCGA CAGG CCGGAGCGGAGGC        GCGGAATTCAGCGCT 100 33
HR116_RS24935 NONE
HR116_RS24930 NONE
        tauD 5408898 .. 5408942 -   -12  -2.52543   AGCTGGCGGAACGGA CAGTTGCCG-GCGCGGGCCGCC GGA GGAAGCCCGCGCGCGGCGTC-G TCAGAAGGGCTTGTC  65 26
HR116_RS24920 5406648 .. 5406668 -  -9.6  -4.26903   TTGAGCGCAGGAAAA            GGGGGCGC GCAGG GCGCCCCT            TCCCTCATCCTCCGT  83 101
HR116_RS24900 NONE
        cydB NONE
HR116_RS24890 5399397 .. 5399420 - -11.8  -4.83169   ATCGGCGGACAAAAA          GA-AGCCCTCC AGC GGAGGGCTCTC          GGAAAAGGGCGCCGG 100 63
HR116_RS24880 5396975 .. 5397028 -  -3.5  -3.85698   GCCCTGCGCCAGAAA GGCGGCAAGCGCGGCGTCGCC-TCGC TGT GCATCGGCGGCGGCGAAGCCACCGCC GTGGCGCTCGAACTG  56 103
HR116_RS24870 5393952 .. 5393983 - -16.6  -4.07568   GGGCGGTCGCGAAAA      CGCGGAGACCAAGC GTTT GCTTGGCCTCCGGG       CGTTTCAGCGGTGTA 100 52
HR116_RS24865 NONE
HR116_RS24860 5390395 .. 5390425 - -19.9  -4.07568   CGCCGCCCGCGAAAA       CGAAGAAACCGGC ACAAG GCCGGTTTCTTCG       TGGCTAGGAACGCCG 100 45
HR116_RS24855 5386910 .. 5386923 -  -9.5  -3.30441   GATCACCGGCGACAA               CCGCG GCAG CGCGG                CGGTGGTGGCCAAGG  61 494
HR116_RS24845 5382990 .. 5383020 - -13.3  -2.71731   CCGATCGGGTAACGA      TGC-GGGCCCGGTC CCCG GACCGGGCCTGGCA       GGATGTATATCCCGC  68 92
        moaC NONE
        moaD NONE
        moaE 5381627 .. 5381674 -   -12   -3.1855   CCTCCGAAGAGGTAA GCCG-GCGGCGCGAGGAGGTAG ACGTCA CT-CCTCCCAGCGCTGCGCGGC GGCCTGGTCGCTGCA  70 2
        moaB NONE
HR116_RS24820 5379682 .. 5379692 -  -8.2  -4.56597   TCCTCTGGCGAAAAA                 CGCG CTC CGCG                 GCAGTGGGCAACCCC  86 106
HR116_RS24815 NONE
HR116_RS24810 NONE
HR116_RS24805 5377100 .. 5377142 -  -6.4  -3.59979   TTTGGTCAGGGGAAA CGCCC-ATTCGCT-CCGC GCCGCCCAT GCGGCAACGAACCGGGCG TTGCCTCGCTGAAAA  59 135
HR116_RS24800 NONE
HR116_RS24795 5373001 .. 5373018 - -12.7  -3.91897   CGTGCCATGCAGAAA             GGCCACC CGAG GGTGGCC              TTTCTGCATGGCGAC  83 66
HR116_RS24760 5366812 .. 5366842 -    -8  -4.15044   CGGTTTCTGAAGAAA       GACCGCGGGAGCGC ATG GCGCAACGGCGGAC       GATCGCCAGCGATCA  72 85
HR116_RS24735 5360767 .. 5360790 - -11.6  -2.80816   CGGCCACCCACGAGA          CCCGCCGGGC CATG GCCGAGCGGG           CGCTGCAGAACTTCG  63 123
HR116_RS24720 NONE
HR116_RS24715 NONE
HR116_RS24710 5354711 .. 5354728 -  -2.6  -3.47322   GCTCACGATAACGAA             GAGGTG CGCTAC CGCCTC              AGCGGTAGATGGTCA  47 24
HR116_RS24705 5353745 .. 5353762 - -14.1  -4.98531   CGCCGAAACGAAAAA             GCCCGGC ATCC GCCGGGC              TTCTCCCTGCCCCTT 100 45
HR116_RS24680 5348400 .. 5348420 - -16.1   -4.4078   GGCCGCCAACGAAAA            CGCCCGCCA TGA CGGCGGGCG            CTCGCTCTGCGAAGG 100 47
HR116_RS24625 NONE
HR116_RS24620 5337707 .. 5337717 -  -2.4  -2.76453   TTACAACGCTAATCA                 GAGG TTG CCGC                 GGGCTGCTGCCGACG  39 44
HR116_RS24615 NONE
        narH NONE
        narJ NONE
        narI NONE
HR116_RS24595 5330002 .. 5330015 -  -2.3  -3.71873   GGAGGGAGAGGGAAA               CATCG GCGC CGAAG                GCTATTGCACCAGCG  52 27
        moaA 5328918 .. 5328936 -  -8.8  -3.27475   TGGCCTACCAGAAGA             GCGGCC TCGCCCT GGCCGC             TGGCGAAGGCCCGCT  60 60
HR116_RS24585 5327507 .. 5327532 - -18.3  -3.36557   AAGGAGCTGAAGGAA         GGCGGCGACTG ACGG CAGCCGCCGCC          GGCGAGCGGTCAGTC  93 35
HR116_RS24560 5320485 .. 5320506 -  -6.5  -3.18264   GCTCTCATCGATGAA           CAGCG-CGCC AAG GGCATCGCCG           CCGAGCGGATCATCC  51 379
HR116_RS24550 NONE
HR116_RS24545 5317998 .. 5318016 -  -3.1  -2.78384   TTCCTTGCGATGATA             GGGAC TTGCCAGGC GTCCC             CAGGCGGGAACGCCG  40 56
HR116_RS24540 5317470 .. 5317517 -  -2.4  -2.66634   GAGCTTAGGAGATTA TCCGCGCTTC-GGCCACCGACAG CCT CAGCCGGCCGCCGGATGGGCAGC CTGGTAGGCGGCCAG  38 2
HR116_RS24535 NONE
HR116_RS24530 NONE
HR116_RS24525 5315657 .. 5315702 - -23.3  -3.26319   AATCCGGGACATGAA GGGCAC-CCCATCGCCTGGCCC GAT GGGCCTGGCGATGGGCGCGCTC AATCCAGCCGGCACC 100 24
HR116_RS24520 NONE
HR116_RS24515 5313863 .. 5313874 -  -3.6  -4.13767   TGTCGCAGTGTAAAA                CGGA GTCC CCCG                 CAGGCGAAGGACTTT  61 40
HR116_RS24510 5312660 .. 5312703 -  -6.1  -3.64487   CTACATCCGTAACAA GGACTACGGCCTGT-CGCCGGA AAT CCCGGCGGACAAGC-GCA-CCC TCAACCAGTTCCGCC  59 211
HR116_RS24490 5308741 .. 5308751 -  -6.8  -3.31144   TCTTGACGTGCAGAA                 CCTG CGC CAGG                 GCCTGGCCGACCTCG  54 500
HR116_RS24480 5307504 .. 5307535 -  -4.2  -3.62775   AGCAGTTCGCAACAA      CCGGTCCGGGCCGT GACG ACGGCAGCGACCTG       CAGCGAACCGAGGCC  53 95
HR116_RS24475 5307052 .. 5307108 -    -3  -3.61398   GCTTTCCTCGAAGAA CCCCG-GGGCTGA-ACTCCAG-TGACC ATGCCG AGCCAGCCGGAGCACCTGCCCTCGAGG CAGCCGGCTGCCACT  51 207
        exoS 5305052 .. 5305071 - -13.6  -2.80344   TGCCGAGCCAAGAAT            CGGACACC CCAA GGTGTCCG             TTCGTGACGTCTTTC  72 54
HR116_RS24435 5297964 .. 5297974 -  -5.4  -4.21275   TCAAGTCACCGAAAA                 CTCA TGA TGAG                 TTACTTTCATTCAGT  65 430
HR116_RS24430 NONE
HR116_RS24425 5296895 .. 5296915 -  -3.4   -2.7083   CACTCTATAAACTGA           CTAAA-GCA ACCA TGCCTTTAG            AAAAATAAATATCCA  40 45
HR116_RS24420 5296365 .. 5296410 -  -8.2  -3.45945   GTGATCGAGAAGGAA CGCGCCAAGCTAGCCGAGGCC GAACA GGCCCTGGCCAAGCTGGC-CG AGCAACGGCAGAAGA  60 101
HR116_RS24395 5289988 .. 5290022 -  -3.6  -3.29471   GGCCCAGCATAGGAA    TCCTGCCGCGTCGGCG CCGTC CGCCAACG-GAC-GAA    AGCTACGCCGAATCG  46 28
HR116_RS24390 5288983 .. 5289016 -  -4.6  -2.89668   CAAGAGGCCGATAGA    CCGTCGAG-GC-GAAC GCTC GTTCAGCGCTCGCCGA     TTTATTCGACGACTG  46 27
        lptF NONE
        lptG 5286602 .. 5286619 - -12.7  -4.10934   ACAAGGAAGCACAAA             GGCCACC CGTG GGTGGCC              TTTTTTCATACCCGG  89 54
HR116_RS24370 NONE
HR116_RS24365 5284086 .. 5284111 -  -9.7  -5.95539   CTGCAAATAAAAAAA         GGCAGCG-CTGG AGT CGAGACGCTGCC         TTTACCCGAACTGCT 100 66
HR116_RS24355 NONE
HR116_RS24350 5279991 .. 5280016 - -11.3   -5.1675   CGAGGCACCAAAAAA         GCCCGCAAATAT TTG AT-TTTGCGGGC         TTTTTCGTTTCTGGC 100 466
        queA NONE
         tgt NONE
        yajC 5277185 .. 5277204 -  -3.4  -2.82516   TTGTTGAGCATGACA            CCGCCCGT TATG ACGCGGGG             CGCCTTGCGCGCCCC  40 61
        secD NONE
        secF 5274324 .. 5274342 - -12.4  -4.39166   GCGCAGATACGAAAA             CTCCCGCC AAA AGCGGGAG             TCCTCGAGTGACCGG 100 70
HR116_RS24315 5273605 .. 5273636 - -24.6  -4.26076   TCATCTCCATGAAAA      TGCACAAGGGCGCC CGCG GGCGCCCTTGTGCA       TCATTGCGACAGTCA 100 44
        trmJ NONE
        cysE 5271019 .. 5271050 -   -10  -3.97388   ACATGCTAGCAGAAA      GC-CGCCGGCCGCGC ATT ACGCGGCCGGATTGC      CGTCCTCGTCCTTGA  78 9
        iscR NONE
        iscS NONE
        iscU NONE
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 5265328 .. 5265346 - -10.2  -5.10933   TTACCTAAAATAAAA             CCCGCGAA TTA TACGCGGG             TTCCCGGCAAATGCG 100 57
         ndk NONE
        rlmN NONE
        pilF NONE
HR116_RS24240 NONE
        ispG NONE
        hisS NONE
HR116_RS24225 NONE
        bamB 5257437 .. 5257463 -   -18  -4.51238   TTCAGAAAACACAAA         GGCCGCTGACGT CGG ACGGCAGCGGCC         GGACACTTGAAACCC 100 44
         der 5255874 .. 5255899 - -18.3   -4.8622   GCGGCCAATGAAAAA         GGCCCGACAGG GATA CCTGCCGGGCC          TTTCGACGAAGGAAA 100 49
HR116_RS24210 NONE
HR116_RS24205 5253689 .. 5253709 -  -2.5  -3.05384   CGTTCCGGCACTCAA            GGATGGATT TCG AAGCGATCC            GCGTCCATGTAGGCC  41 1
HR116_RS24200 5252658 .. 5252683 - -11.7  -2.73364   GGGTTATCTCAACGA         GCGCGGCGTGG CCAT CCTCGCGGCGC          TCGACGAAGTGGCCG  62 306
HR116_RS24190 5251277 .. 5251294 -  -4.7  -3.82083   TCATGATAAGGCAAA             GCGCGGG CTGC CCCTCAC              ACCACCAGCATCACC  58 22
HR116_RS24185 5250856 .. 5250873 - -12.7  -4.75174   CACGGAAGGGAAAAA             GGGAGCC AGGC GGCTCCC              TTTTTTCATGGGATC 100 57
HR116_RS24175 5248180 .. 5248206 -  -4.3  -3.01712   CCGGCGCGGCGAAGA        CGCGCCGGTGCC CCCA GGAAGCGGCG-G         CTATCGGATTGAAAG  45 44
HR116_RS24170 5245899 .. 5245926 -  -5.4  -3.16177   AGCGCACACAGGCAA        GGCG-GGCCCCGC TGG ACGGGGCCTCGTT        GAAGGTTCAGAAGCT  48 32
HR116_RS24165 5243996 .. 5244015 - -12.1  -2.57274   GGTCAGAAGGAACAG            GGGGCGC GTCGAT GCGCCCC             TTTCATGACCAAGGG  65 463
HR116_RS24150 NONE
HR116_RS24145 5241905 .. 5241926 - -13.7  -2.78798   ACCTCGCACGCAAAG           GC-GGGGCGC CGG GCGCCCCTGC           TCGACACGGCGCTCA  72 38
HR116_RS24140 5241278 .. 5241308 - -16.1  -3.57561   GGCCAACCGCTGAAA      CG-GCGCCGCCCCG TACG CGGGGCGGCGAGCG       CTCAACCGACCAGCG  91 27
HR116_RS24130 5239558 .. 5239569 -  -7.2  -2.58861   CAGCAGTTGCAGAAG                CGCC CTCC GGCG                 GACTAGGAGGCGAAG  51 28
HR116_RS24090 5231472 .. 5231509 -  -8.5  -3.67597   GCTGTGATCGAAGAA  CTCAGCGGCGT-GCGCA GCGCGG TGCGCGAC-CCGCTGCG   CGACTTCATCGAGTT  65 131
        guaB 5225496 .. 5225528 - -12.7  -4.19953   TACGGAATTCGAAAA      CGACACGGGGCTG AATCGAA CAGCCCCGTGCAG      CACTCATTTCAATCA  89 44
        guaA 5223835 .. 5223858 - -16.8  -4.42386   GGCGGAGCCATAAAA          GACAACGGCC TTAC GGCCGTTGTC           TTTCGGATGAATCAC 100 57
HR116_RS24055 5221532 .. 5221543 -  -2.2  -4.63486   ACCGCTGCAAGAAAA                GCACG GGA CG-GC                GCAGAATTTGCTGTA  68 488
HR116_RS24045 5219011 .. 5219030 -  -4.3  -3.83026   CTGCGCGACAGCAAA            GCGA-CGA TTTCC TCGATCGC            GCAAACCCTGGGCTA  58 183
HR116_RS24035 5216992 .. 5217037 -  -2.5  -4.45544   CTGCAGCAAGCAAAA GAGC-TCCCCAGCG-CCAGCG GCGGAT CGCTGGTCGCGGACTACGCTC AGGCTACCTTCACGA  65 24
HR116_RS24030 NONE
        tadA 5214797 .. 5214807 -  -2.4  -3.40639   AATTCGACGAAGGAA                 GCGC GCG GCGA                 CTACGACTTTACGCC  46 160
HR116_RS24015 5213261 .. 5213278 - -14.1  -4.75404   AAATCCCATGAAAAA             GGCCGCC CTAT GGCGGCC              TCTTCCGGCAGCGAT 100 44
HR116_RS24010 5212347 .. 5212371 - -12.1  -3.40611   TGGACGTGAAGAAGA          TGCTGCCGCGC CTG GCGCAGAAGCA          GTGGTACGCCAAGAC  73 241
        purL NONE
HR116_RS23995 5206523 .. 5206535 -  -3.3   -3.9392   GCCGACGCCAAATAA                TGGCA CTT TGCCT                TGACATGATGAATAT  56 123
HR116_RS23990 5206095 .. 5206113 - -13.1  -4.48987   GGCGGATAACGAAAA             GGGCGGC AACTG GCCGCCC             TTCTTGCTTGTCCGA 100 48
HR116_RS23950 NONE
HR116_RS23945 5196096 .. 5196116 -  -2.5  -2.53263   CGCAGGGCGAAGCCA           CCGGTCGC TCGTTC ACG-CCGG            GTCCTCGACGAGGTC  37 17
HR116_RS23940 NONE
        purT NONE
HR116_RS23930 5193918 .. 5193928 -  -2.4  -3.32294   GGAAACCCGCGACAA                 CGAC CTC GGCG                 CAGTGTCCTGAGTCT  45 44
         ffh 5188512 .. 5188530 - -13.8  -3.54424   GCCGACGGCGCGAAA             CCGCCGGC GTG GCCAGCGG             CCGCGCGTCCGATCA  81 38
        rpsP NONE
        rimM NONE
        trmD 5186748 .. 5186762 -  -4.9  -3.01712   GCTGTGCTCCTAAGA               CCGGC AATCG GCCAG               CCATCGATACGTTAA  47 37
        rplS 5186345 .. 5186360 - -10.4  -5.24989   CCAGACATGAAAAAA              GCAGCC CTCG GGCTGC               TTTTCTCGGAGAAGA 100 47
HR116_RS23885 5185774 .. 5185789 - -10.4   -4.2349   CGGGGATATGGAAAA              GGCACC CGTG GGTGCC               TTCTTTCTGCCTGTA  81 41
        xerD 5181939 .. 5181951 -  -4.8  -3.28791   ACGCTTGTCGCAGAA                CGCT ACGAA AGCG                CCTCTTTTCGGATAG  50 64
        dsbC 5181080 .. 5181103 -  -6.7  -5.14626   ATGATGAAAACAAAA          GAGCCGC ACATTACGAA GCGGCTC           TTTATTAGTCAATTG  88 57
HR116_RS23860 NONE
HR116_RS23855 5178116 .. 5178134 - -13.1  -4.88711   AGAAGACATGAAAAA             GCCCGCC ATCAA GGCGGGC             TTCTTCCTTTCACGA 100 46
HR116_RS23845 5176241 .. 5176286 - -10.6  -2.78715   AACTGGGCGAGCATA CCGATGCCCT-GCTCGCCG-AGC TGG GCTACGAC-AGCGAGGGCATCGC CGCCCTGCGCCGGGA  60 238
HR116_RS23835 NONE
HR116_RS23830 5173416 .. 5173443 - -11.3  -4.58395   TCTATCCCTGAAAAA       CG-GGCCCGGACG CCTT CG-CCGGGCCGCG        GGCCTATCAGGCCTT  95 32
HR116_RS23825 5172760 .. 5172778 -  -8.8  -2.87211   AGCCCGGGTCAGATA             CCGCGGAA CTC TTCCTCGG             TAACGACCCGATAGG  55 0
HR116_RS23820 5170540 .. 5170556 -    -5   -3.6682   GGTCATCGATGGAAA              CCGGCC CGAGC GGCCTG              CCCCGGGCGCAGCCA  55 120
HR116_RS23815 NONE
HR116_RS23810 5164490 .. 5164516 -  -2.8  -3.66921   AAGTCTAACCTGAAA         CCCGCCCGCG TGCGGTC CGCCGGCCGA         CCGCCTGCCCTGCCT  51 59
HR116_RS23805 5163892 .. 5163921 -  -4.1  -3.93288   CTCGACGGAAGGAAA       CGGCGGCGGCGATC AAC GCTCGCC-CTGCAG       CCATTCCAGCTGCAA  58 8
        recJ 5162106 .. 5162132 -  -7.8  -4.48072   ATAGCTAGCAGAAAA         GCAGGTGGCAGC TAG GTTGCCCCCAGC         TCCGGGACGCGCTCA  81 38
        lasB 5160304 .. 5160362 - -12.4  -3.01712   CCTCCTGGCGGAAGA CGGCTTGAGCGACCCCGACCGGCATTCC TTCCT GGAGTGCCGGCCGGGGCCAC-CGAG-CT TACAACGCGCTCGGG  68 25
HR116_RS23790 5158956 .. 5158973 -  -4.2  -2.88243   GGGAGAATAACATCA             TATTGC CATTAC GCAATA              TCTCCCACGAAACGC  44 139
HR116_RS23785 5158508 .. 5158530 -  -7.7  -3.04144   CTGCTACCTGGAACA          CCTGTCGCAG AGCC CCGCG-CAGG           GCTGAGCGACGCGCC  54 43
HR116_RS23775 NONE
        armR 5157050 .. 5157064 -  -5.7  -3.95852   AGCCCAGGAATCAAA               CGATG TGTTC CATCG               CCCGCACCAATGGCA  62 56
HR116_RS23765 5155652 .. 5155689 - -12.7  -2.60075   CCGTGCCGAACCAAT   GCGCAGGACGAATAGTC GCTC GGCTACCCGCCCTGCAC    GAAGCCGGTTTCTCT  67 42
HR116_RS23755 5153043 .. 5153065 -  -7.7  -3.58343   TGGAGGACGCTGAAA           GGCTCGG TCTGCTCCG CCGAGCC           CGGGTTCGAACAGGA  60 309
HR116_RS23735 5148102 .. 5148126 -  -9.1  -3.04144   CGCCTACCTGGAACA          GGCGCCGCCGC TGC GCGACCGCGAC          GACCTCGGCAGGCAC  57 425
HR116_RS23725 NONE
HR116_RS23720 5143919 .. 5143930 -  -5.8  -5.22481   GACAAAGAAAGAAAA                CTGG CAAG CCAG                 ACTTTTCTGAGAAGA  87 99
HR116_RS23715 NONE
HR116_RS23710 NONE
HR116_RS23705 NONE
HR116_RS23700 NONE
HR116_RS23695 NONE
HR116_RS23690 NONE
HR116_RS23685 5135147 .. 5135190 - -10.8  -3.05384   CCGGCCTCTATTTAA TGCCGGCCG-GCGACGCATGG CCG CCGCGCGCCGCTCAGCCCGCC GGGGCCGGCGGCACC  66 16
        prfB 5133848 .. 5133860 -  -4.8  -4.11371   CAACAGGGGCGAAAA                GCGT AGCGA ACGC                CGGCCAGGCAAGGCG  65 128
        lysS 5132239 .. 5132252 -  -9.5  -5.14563   GCGGCCATGAAAAAA               CCGCC CGAA GGCGG                CTTTTCCATGGACTG 100 50
HR116_RS23670 5131324 .. 5131339 - -11.8  -4.72272   TTCGGGTATGAAAAA              CCCCGC CATG GCGGGG               TTGACGCTCAGGTCA 100 38
HR116_RS23665 NONE
HR116_RS23660 5129381 .. 5129393 -  -4.7  -3.36515   GCGCACCGGGAAAGA                CCGGC ACG GCGGG                GAACGGTCAGAGGAT  50 32
HR116_RS23655 NONE
HR116_RS23650 NONE
HR116_RS23645 NONE
HR116_RS23640 5126792 .. 5126811 - -16.4  -4.19953   TACGGAAGCCCAAAA            GCCCCGCC ATCC GGCGGGGC             TTTTTCATGGGCGGG 100 59
        cadR 5122077 .. 5122102 -  -9.6  -3.57144   CGCTGGACGTCGAAA         GCGCCGCGCG CCTCGC CGCGCTGCAC          GAGATGTATCCGCGG  64 262
         ppc 5119056 .. 5119073 -  -6.2  -3.73775   CGTATTTGCAGGAAA             CGGCAC TGTATG GCGCCG              AAAAGGCTGTCCAAG  60 95
         adk 5118290 .. 5118319 - -20.7  -3.53012   TCGCCGCCCCGGAAA       CGCCGACGGCCCG CAAG CGGGCCGTCGGTG        CTACAGCGCTGCGGA 100 41
        tsaB 5117535 .. 5117545 -  -8.2  -2.71263   AAGGCTTGGCAATTA                 CCGC TGC GCGG                 CATTTTCAGGGCGCT  54 31
HR116_RS23595 5117108 .. 5117121 -  -2.3    -3.827   AATAAGGAAGGGAAA               CCACG GGAG CGCAG                GGAACCGCTCAGGCG  54 34
HR116_RS23590 5116201 .. 5116229 -  -3.8  -2.90496   GTGGCGGGGAAAGGA       CTCC-CTAGCCTA GGCG CAGGCCGGCGGAG        CGTCGAGCGCCGCGC  44 41
HR116_RS23585 NONE
HR116_RS23580 NONE
HR116_RS23575 NONE
HR116_RS23570 5112173 .. 5112210 -    -7  -3.14564   CCACCGGCTGATCAA   CAGCCACGAGGCG-ATC GCCCT GACCCGCCTGATGGCCG   CGCAGGCCGGGCAGA  52 316
        mexJ NONE
        mexK 5107468 .. 5107492 - -13.5  -3.28447   CCAGGCAGGAGAAGA          GCATCCGCCAG AAC CCGGCGGCTGC          CGCCACCGGCCTGGC  73 108
HR116_RS23535 NONE
HR116_RS23530 NONE
HR116_RS23525 NONE
HR116_RS23520 5098626 .. 5098660 -  -5.7  -3.53811   TGCACGGTTGCGAAA    GCCTGGTCTGGCTGCTC GGC GAGCAGCGCGAC--GGC    CACTGGCGCTTCCGT  54 257
HR116_RS23490 5094444 .. 5094467 -  -4.5  -3.56643   CCGAGACCGCGGAAA          CCTAGCGGC GGGCAG GCCGCTACA           CCAGCACCTGGCGAG  53 21
HR116_RS23475 5091463 .. 5091482 - -13.6  -4.61873   GCGGAGAAACGAAAA            GGGATCGC CGCG GCGATCCC             TTTTTCGTTCACACC 100 34
        rpsB 5085493 .. 5085530 - -19.3  -3.91402   GGACAGAAACTCAAA   GGTG-GCAAAAAGGGGGC CTA GCCCCCTTCCTGCGCACC   GTCGGACGTCTGAAC 100 50
HR116_RS23450 5084498 .. 5084525 - -14.8  -3.16564   TCCCCATTTGACGAA        GAGGCCGCACGC ATCA GCGGGCAGCCTC         TTCCGGGGCGACAGT  80 55
        pyrH NONE
         frr NONE
        uppS NONE
HR116_RS23430 NONE
HR116_RS23425 5080295 .. 5080308 -  -3.7  -2.73875   GCCGTCCGAAGACTA               GCCGG CGTG CCGGG                TCAACCATTGCCCGG  42 9
        rseP 5078874 .. 5078900 - -16.7  -3.36059   CAACTGACAAATAGA         GAATCTGCCGC AAAGG GCGGCAGATTC         GAATTCAACATGACT  88 39
        bamA 5076451 .. 5076461 -  -5.4  -2.95896   GTACTACGTACAAAT                 CAGA AGG TCTG                 GCCCAGGGAGAACTG  46 14
HR116_RS23410 5075898 .. 5075914 -  -4.3  -2.53164   GTACTCATCATCAAC              GCAGCTG GTT CATCCGC              TCGATCACCTGGCGG  41 4
        lpxD 5074835 .. 5074850 -  -4.6  -2.80411   AAAAAACGTCAATTA              CGCATC AGAT GAAGCG               TCACCGCTTGAGGTC  44 7
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB 5071689 .. 5071702 -  -3.8  -2.87132   CGTGTTTCGGACACA               CACG GAATGA CGTG                CGAGCCGAAGGAAAT  44 150
HR116_RS23380 5070096 .. 5070127 -  -9.3   -4.8384   GAAATAACGCAAAAA      CGACAAGGCCCGG ATTGTA CCGGGCCCGGTGG       CAAAGCTACAGGTTC 100 93
        dnaE 5066485 .. 5066536 - -11.7  -3.14931   TCGAGCCGGGAGCAA GGGCGAT-CCGC-GTTTTCCCGCCGC AGA GCG-CGGAACAACGGCGTTATCGCCC ATCGCGATTAACGAT  70 33
        accA 5065397 .. 5065414 - -14.1  -3.32844   CTCCTCATGCGACAA             GCCCGGC GAAT GCCGGGC              TTGTCGATCGTACCA  77 55
        tilS 5063975 .. 5064006 -   -13  -4.05788   CGTGGGCAAAGCAAA      CTCCTGCTGATTCC GGAG GGAATCGGCGGGAG       CAGTACAAGACGGGA  86 65
HR116_RS23360 NONE
        kdsA NONE
         eno 5060024 .. 5060043 -   -15  -4.77165   TCCTTGAGAAGAAAA            GGGGTGGC TCTT GCCACCCC             TTCACCGTACCAGAC 100 46
        ftsB NONE
        ispD 5058950 .. 5058981 - -21.8  -2.71731   GCGAGCCTGCAACGA      CAAGAAAGCCGACC CTCG GGTCGGCTTTCTTG       TGCCAGGGTTCAGTG 100 35
HR116_RS23320 5055224 .. 5055257 - -15.9  -3.53811   GTGACCTCCGTGAAA     CGGTCGTGGCGAGCC GCAG GGCCCGCCGCGACGG      CTTGTCAGTAATGAA  86 30
        fghA 5054294 .. 5054315 - -10.1  -5.14965   ATTCGCATGAAAAAA           CGCCCTGGT TGGA ATCAGGGCG            TGATTCTACCCCGGA 100 67
        ispF 5053811 .. 5053821 -  -2.4  -2.57344   GAGTTCGCCGAGAAC                 GCTC ATC GGGC                 CATCAGCAAAGCGAC  38 17
        truD NONE
        surE NONE
HR116_RS23295 NONE
HR116_RS23290 5050331 .. 5050367 -  -8.6  -3.06302   ATGAGTTCGACTCAA    GCCCGGGCGATTCC TTTCCCGCT GGACACGCCCGGAC    CCGCTCACCTACATG  57 63
        rpoS 5049255 .. 5049270 - -11.8  -5.43414   AGCAGACACAAAAAA              CCCGGC GAAC GCCGGG               TCTTCAGTGGGTCTA 100 51
HR116_RS23265 NONE
        recA NONE
        recX 5042464 .. 5042481 -  -7.7  -3.07575   AAAACTGGGACTGAA             GC-TGCCG CTC CGGCACGC             GCTCAATCGTCGCTG  54 28
HR116_RS23240 5037286 .. 5037296 -  -4.6  -3.63515   CGGCAGGGCGAATAA                 CGCC ACA GACG                 TTATCCGCCGATACG  55 50
HR116_RS23205 5031205 .. 5031223 -  -5.3  -2.67803   CTTCGAGGAAATCCA            CTGGGACG CCAT CGTCC-AG             GCCGGTCCCGCCCTG  45 293
HR116_RS23195 5029785 .. 5029795 -  -2.4  -3.50853   GTCTCTCAATGAGAA                 GCGG GAA CCGT                 CTCCATTTGTTGCAG  47 5
HR116_RS23190 5029289 .. 5029312 - -18.2  -5.10461   CGCACGCAAGAAAAA          GCCGGAGGCA TCGC TGCCTCCGGC           TTTTTCATGTCCGCG 100 45
HR116_RS23180 NONE
        rpmJ 5026839 .. 5026866 -  -9.8  -3.14132   CGGCTGCTCGAGCAA        GGAGATCGCCCG CAAG CTGGCGATCTCG         GCGGAAACCGTGAAG  62 152
HR116_RS23165 NONE
HR116_RS23160 NONE
HR116_RS23155 NONE
HR116_RS23140 NONE
HR116_RS23135 NONE
HR116_RS23130 NONE
HR116_RS23125 NONE
HR116_RS23120 NONE
HR116_RS23115 5011625 .. 5011655 -  -4.7  -3.18264   CTGTTCACCTACGAA      GCGC-TGCTGG-CGG TGG CCAACCAGCATGCCC      TGGCTGGTCGACCGT  47 426
HR116_RS23105 5009444 .. 5009477 - -17.5   -3.2963   ACGATCCGGGCATAA     TGCG-CGACGCCACCA AGC CGGTGGCGCCGCCGCA     GTCGAGAATCCCGTG  91 393
        ybaK 5003428 .. 5003445 - -10.5   -2.6648   AAAAGTAAGACGAAT             GCCGACC GCTA GGCCGGC              GGGATTAGCGGCTCA  59 38
        glpK 5001735 .. 5001765 -  -2.5  -2.71011   ACCTCCTGGGAACGA      TCGCCACAGCATGC CGCC GCAGGCTCCGG-GA       TGGGCGATACAGTGC  39 170
HR116_RS23065 5000796 .. 5000808 - -10.5  -3.04144   CCTGTAGGGCGAATA                CCGCC ACA GGCGG                TATCCGCCGATACCC  62 146
HR116_RS23060 5000197 .. 5000217 - -19.7  -3.55444   GGGCGATGCCGCAAA            GCCCCCGGC CAG GCCGGGGGC            GTCGCGCCAGGGAGC 100 45
HR116_RS23045 4996500 .. 4996514 - -11.4  -3.19389   GAATTCACCGAGGAA               CTGCGC GAG GCGCAG               GAACGCAACAACGCC  66 265
HR116_RS23035 4994580 .. 4994602 -  -7.6  -3.25137   AACTGAAACAGCGAA           CGGCCTGATC CGC GCTCAGGCGG           CCTGGCGCTCCAGGC  56 18
        mmsA NONE
        mmsB NONE
HR116_RS23010 4988609 .. 4988630 -  -8.7  -2.67143   AGACCGACGACATGA           TCGAGCAGC ACCG GCTGCTGGA            GCGGGTCGCCGGGCT  52 231
HR116_RS22995 NONE
HR116_RS22990 4986096 .. 4986128 -  -8.4  -3.15544   GTCGACGCCGAGGAA     CT-GGCGGCG-AGCAG CAG CCGCAACGCCGCCGAG     CTGTTCGGCTGGGAC  58 44
        ptsP NONE
        pfkB NONE
HR116_RS22965 4978340 .. 4978353 -  -8.1  -3.14132   CTCGTTGCCGATCAA               CGAGG CCAG CCTCG                CACAGGAAGATGGCA  54 138
HR116_RS22845 4947532 .. 4947549 -  -7.7  -3.28712   GCGGCTGGGCTACAA             CGGCCTGC TGG GCAG-CCG             CGAGAAGGACCATGG  56 465
HR116_RS22835 4942156 .. 4942174 - -10.2  -3.60627   GTATTGTATCGGAAA             GCCTAGCG CGA CGCTCGGC             TTTACTCTCGCGTTC  70 52
        grxD 4941725 .. 4941741 - -10.8  -5.13354   CGGACAAAAAAGAAA              CCCCGC ACAAG GCGGGG              CTCTTCGTCGGATGC 100 46
HR116_RS22825 4940479 .. 4940504 -   -19  -3.25015   GGGAACCACGACGAA         GCGCCGGCGG CCTGCC CCGCCGGCGC          TTTTTTCTTGCCGCC  93 49
HR116_RS22810 4938646 .. 4938663 - -14.1  -4.77157   CGAACCCATGAAAAA             GCCCCGC CGAA GCGGGGC              TTTTTCCAACGCGCG 100 54
HR116_RS22795 4935672 .. 4935688 -  -2.9   -4.2349   GCTTTAGACGCAAAA              GCGACAG ATT CTATCGT              TTGCGCGACTCAAAC  61 35
HR116_RS22790 4934301 .. 4934341 -   -30  -2.77899   CGCTTTCAGCAATCA  GGAACGAAGAACCCCGGC TCATG GCCGGGGTTCTTCGTTCC  ATCGCAGGCGGCGCA 100 47
        mexP NONE
        mexQ NONE
        opmE 4927428 .. 4927440 -  -6.2  -4.44667   TCGTTCAATAAGAAA                CGGC GGGCA GCCG                GAACGTACCTGAAGA  74 306
HR116_RS22765 4926573 .. 4926589 - -10.9  -2.75844   GGGGCGACCGTAAAG              CTTGCCA CGG TGGCAAG              GTCAAGCAATGCAGC  63 365
HR116_RS22760 NONE
HR116_RS22755 NONE
        purB NONE
HR116_RS22745 NONE
HR116_RS22740 4920365 .. 4920402 - -18.3  -2.87132   GCGGTCCCGGACACA   CCGGGCTGCGGGTGGCG CGGA CGCCACCCTCGCCCCGG    AGCCGCGCCAGGCGA  90 57
HR116_RS22735 NONE
HR116_RS22730 NONE
HR116_RS22725 NONE
HR116_RS22720 NONE
HR116_RS22715 NONE
HR116_RS22710 NONE
HR116_RS22705 NONE
HR116_RS22700 NONE
HR116_RS22695 NONE
HR116_RS22690 NONE
HR116_RS22685 NONE
HR116_RS22680 NONE
HR116_RS22675 NONE
HR116_RS22670 4907951 .. 4907964 -  -3.7  -2.52464   TCTCGGGGGAATTCA               CGCGC CCAG GCGGG                CCATCAGGGTCTTGT  41 9
HR116_RS22665 NONE
HR116_RS22660 NONE
HR116_RS22655 4905456 .. 4905474 - -14.6  -5.47218   CCCCAGGCAAAAAAA             CCGGCGTT ACA AACGCCGG             TCCAAAGGCAACGCG 100 55
HR116_RS22650 4903780 .. 4903798 - -13.1  -3.36785   CCACACCGCAAGCAA             GCCCCGC AATTG GCGGGGC             TTCGTTTTTTCCGCC  74 43
        apbC 4890966 .. 4890988 - -19.2  -3.59979   CCGCCCCAGGGCAAA           GGCAGCCGTC GCC GACGGCTGCC           CGATCGCCTCAGTCG 100 34
HR116_RS22580 4890288 .. 4890304 - -10.8  -5.19261   AAAGGCATGAAAAAA              CCGGGC GCCAG GCCCGG              TTTCCGGTGTCGAAA 100 51
HR116_RS22575 4888985 .. 4889001 -  -9.3  -3.60627   TTATGCGACCGCAAA              GCCCGGC CAG GCCGGGT              CTTCGCAGGTCAAGG  68 43
HR116_RS22570 NONE
        sdiA 4886769 .. 4886785 - -10.1  -3.26473   CTAAAGGAGGATGAA              CGGCAGG CAA CCTGCCA              GATCTGGTAGGGCGC  66 63
HR116_RS22560 4885925 .. 4885936 -  -2.2  -3.12874   AGAGAGACTACGCAA                GTCGG CAG CCG-C                GGCCAAATCCCGGAA  43 127
HR116_RS22555 4885039 .. 4885058 - -12.1  -3.33696   GCCGCCGCCAAGGAA            GGCCGCG CGGGCC CGCGGCC             ACCCTCGCCGCCCCT  72 44
HR116_RS22550 NONE
        rarD 4882972 .. 4883003 -  -7.2  -4.03888   CATGGACAACAACAA      GGTCTCCC-GCGGCA AGC TGCAACCGGGCGACC      TGGTGTTCTTCCGGA  67 249
HR116_RS22535 4880364 .. 4880381 - -12.7  -4.86621   ACCGTTAACGAAAAA             GGCCACC TCGG GGTGGCC              TTTTCGCGTTCTCGC 100 103
HR116_RS22510 4874871 .. 4874915 - -11.4  -3.05816   TTATCCGCCATCCAA CGCCGGCGCGGCGGATAACAG CAAA CGGTTATCCGCC-CTCCGAAG CGGTCGGCGGCGCGC  66 43
HR116_RS22500 4871447 .. 4871457 -  -8.2  -3.29829   GACATCGGCGGATAA                 CGCC CAT GGCG                 TTATTCGCCCTGCAC  60 122
HR116_RS22470 4862719 .. 4862737 -  -6.6  -3.64703   GGTTCGCCAGGTAAA             GACCGCCG ACG CGACTGTC             TTTCGTAGCGAACCT  59 48
HR116_RS22455 NONE
         pap 4858067 .. 4858079 -  -4.8  -2.65298   TCGAGCGAGGATAAG                GCGA GGCAA TCGC                GCGAGGCACCGATCA  43 100
HR116_RS22445 4856770 .. 4856811 -  -8.6  -4.90778   GTCATGTAAATAAAA CCCATGA-GGCGAGCCCCG ACCTG CGGGGCCCGCCGTCGCGCA CGGGCTCAGCGTACG  90 31
HR116_RS22440 4855828 .. 4855845 - -14.1  -4.72272   CGCGCGCATGAAAAA             GCCCGGC AATA GCCGGGC              TTTTTGGGGTTGGCG 100 203
HR116_RS22425 4852815 .. 4852829 - -11.4  -4.83615   GATGGCGGATAAAAA               GCGTCG CGG CGACGC               GCTGGCGCACATAAA 100 168
HR116_RS22420 NONE
HR116_RS22415 NONE
HR116_RS22410 4850127 .. 4850137 -  -8.2  -3.94724   TAAAGCATATAAGAA                 CCCG GTT CGGG                 GTCTTGCCTCAGAGC  71 34
        ssuE NONE
HR116_RS22400 NONE
        ssuD NONE
        ssuC NONE
        ssuB NONE
HR116_RS22380 4845138 .. 4845163 - -18.3  -5.15634   TACGCGACGAAAAAA         GGCGGGG-CCCC ATC GGGGTCCCCGCC         CTTCTCGCCGCCGCA 100 59
HR116_RS22345 4841089 .. 4841099 -  -8.2  -3.63515   GTGTAGGGCGAATAA                 CCGC TAC GCGG                 TTATCCGCCACCTCG  65 58
HR116_RS22335 NONE
HR116_RS22330 4838702 .. 4838715 -  -3.7  -3.07816   CGGGCAGGGAGTGAA               CGGCG GTCA CGGCG                GCATCCTCTTTTGTC  45 150
HR116_RS22325 NONE
HR116_RS22320 4836964 .. 4836982 - -11.7  -3.73224   CCATGGGTGACGAAA             CGCCTCG TCCAG CGAGGCG             CCAGCACCCTAGCCC  78 82
HR116_RS22315 4836557 .. 4836581 -  -6.3  -3.21747   CCAGGGCAGTAGGAA          GGATTGCCCGA GTG TCGGCCAGCCC          GCCGGCGGGGACAAG  53 91
HR116_RS22310 4835534 .. 4835564 -  -5.4  -5.30575   GAAAAAGCGAAAAAA       GACACCGGCC GGATGGCAGAA GACCGGCGTC       AGCCGGTCTTCACCT  91 81
HR116_RS22305 4834394 .. 4834421 - -11.9  -3.90048   CCCTTCTGAAAAATA        CCGCCGGCGCC GATCTT GGCGCCGCCAG         CCCGGTCGCGGTGCC  81 337
HR116_RS22285 4830026 .. 4830049 -  -9.4  -3.55444   TTCGTATCCGCGAAA          GCGGCCGCCC CGAG GGGCGGCGGA           CCTCAGAAGTTCACC  68 28
HR116_RS22280 4828574 .. 4828612 - -26.9  -3.28924   GATGGGCCGTCATAA  CGC-ACGAGCGCGTCGGC ACAA GCCGACGCGCTCGTCGCG   ACTGGCCGGGACTCA 100 38
HR116_RS22275 4825926 .. 4825979 -  -8.6  -3.18582   GATCCCACCGAGCAA CTGCGCCTCGGCCAG-CGCCTGGGCG AACT CGCCCCGCCGACCGGCCGCGCC-CTG CACTGAGGCCGCTCA  58 38
        pdhA NONE
HR116_RS22255 NONE
HR116_RS22250 4820093 .. 4820104 -  -7.2  -2.71712   CGCCTTGCCGGAAAC                CGGC GCTT GCCG                 TACAACGCCCGGCAG  52 462
HR116_RS22230 4818652 .. 4818677 - -23.3  -4.26903   GGGAGCCGAGGAAAA         CCCGGCGCGGC CCGT GCCGCGCCGGG          TTCGCTCAATTGCCG 100 31
HR116_RS22225 4818312 .. 4818322 -    -4  -2.64218   ATTTTTTATGATAAT                 GATT TTC AATC                 GTATTCTTGTGAGAT  41 48
HR116_RS22220 4817715 .. 4817732 -  -3.4  -2.87132   GTTGGTCGTTATAGA             GGTTCA GACGCG CGAACC              GGCAAGACTCGGTAA  42 46
HR116_RS22215 4816619 .. 4816650 -  -3.7  -4.08767   TCCACGGCTCGAAAA     TGCGCTT-C-CCGGC CCCT GCCGGAACAAGCGCG      CGGGACGACTGCCCG  61 77
HR116_RS22210 NONE
HR116_RS22205 4813086 .. 4813107 - -10.2  -2.73364   CCTTTAGCGCAAGCA           GTCCACGA ACGCTA TCGTGGAC            AGTTGCTCAGGCCGC  60 32
HR116_RS22200 NONE
HR116_RS22195 NONE
HR116_RS22190 4808364 .. 4808379 -  -8.2  -4.18494   CATCGCCATCGAAAA              CGGCAC CAGC GCGCCG               CAACTGTTGCAGGCG  76 72
HR116_RS22180 4807393 .. 4807424 -  -7.9  -3.01924   CAGGCTTCCTGAACA      CGACCGGGCGATG GTAGTA CATTGCCAGGCCG       TTGCGCTGGCCGGCG  54 87
HR116_RS22175 NONE
HR116_RS22170 NONE
HR116_RS22165 4804065 .. 4804082 -  -6.2  -3.01712   CTCCCTGTGCGAACA             CCAGCC GAGTAT GGCCGG              CCTTGCGCCGCTTCA  49 38
HR116_RS22160 4803607 .. 4803643 -  -4.4  -2.88231   AGCAGAAGTACCAGA   CCGCGAC-CATGCGCGAG TTC CTCG-ACCTGTGCCGCAG   CGAGACCGCCGGGAT  44 82
HR116_RS22150 4801653 .. 4801692 -   -23  -3.53091   AGCCGGGGCCGGAAA  GCAGAAAGCCCCTGCCGC GGAT ACGGCAGGGGCTTTCTTC   GCCTGGCGCGACGAG 100 54
HR116_RS22110 4792472 .. 4792500 -  -4.3  -3.65812   GGCCCTGGAAGACAA        GCCGCGACTGAAG GTG CGCCCGCCGCGCC        TGGGCGGCAACCGCT  55 493
        phnC 4789250 .. 4789263 -  -2.3  -3.03159   TGAAGCGTTTCAACA               TGGAG AGAA CTCCT                GGGCAGGGTTTGGCG  41 65
        phnD NONE
        phnE 4787356 .. 4787372 - -10.8  -3.53811   TGCATGGTTTGGAAA              GGGCGC ACCAG GCGCCC              TCCTCGCGTCGTCAG  73 37
        phnF NONE
        phnG NONE
        phnH NONE
HR116_RS22055 NONE
HR116_RS22050 NONE
        phnK NONE
        phnL NONE
HR116_RS22035 NONE
        phnN NONE
        phnP 4779224 .. 4779245 -  -9.3  -2.61264   CCGCTGAGCGACAAG           GGCGCCACG GAAC CTCGGCGCC            ACTGAGCCGGCACAA  56 294
HR116_RS22000 4777658 .. 4777680 -  -2.7  -4.09511   AACACTGCGCTAAAA           GAGCAGA AAATTCGAA CCTGCTC           AGTAGCAGCTAGAAA  57 174
HR116_RS21995 4775860 .. 4775887 - -20.6  -5.14563   TTCGGGACGAAAAAA        GGCCCTCCCGGG TAAC CCCGGGAGAGCC         CATTTGCTCTGTACG 100 330
HR116_RS21990 4774727 .. 4774781 -  -7.7  -3.59262   TGCCACAGGGGGAAA TGGCGG-AGACGGCGTGCCGCACGACG GCA CGCCGGGCTGG-CGGCGTCTGCCGTCA GGCCTCCTTCTCCAG  62 23
HR116_RS21985 NONE
HR116_RS21980 NONE
HR116_RS21975 NONE
HR116_RS21970 4771211 .. 4771236 - -14.7  -2.52896   GGAGTTCGGAAGGGA         CGGGATGGCGG CAAG CCGCCATCCCT          TTCCGACCTCCTGCT  74 39
HR116_RS21960 NONE
HR116_RS21955 4768018 .. 4768030 -  -2.6  -2.71712   CCTGCTTTTCGAAAG                CCGC GAGGT GCAG                TGGAGCACGCCGTTC  38 285
HR116_RS21940 4764244 .. 4764257 -  -3.8  -4.98917   GAAAAGAGAAGAAAA               TCCG CCGCAT CGGA                CCTCCGGTCCCGTAC  81 205
HR116_RS21935 4762895 .. 4762910 -  -2.4  -3.76125   TCAGGTGAAGGGAAA              GCGTCG GACT CATCGC               AACCTCTCCTGCCTA  52 64
HR116_RS21930 4761984 .. 4762000 -  -7.9  -3.85817   ATCGCCGGGGAGAAA              CTCCGCG CGC CGCTGAG              CGGACAACTGCTGGA  66 321
HR116_RS21905 NONE
HR116_RS21900 4757638 .. 4757656 -  -6.6  -3.57144   TCGCGCAGTCCTAAA             CTGCCCCG CTC CGAGCCAG             CCGTCCTGTGCCGAG  59 185
HR116_RS21895 NONE
HR116_RS21890 NONE
HR116_RS21885 4755061 .. 4755080 -  -7.8  -4.39386   CGGAAAGGACGAAAA            CCTCAGCG ATAG CGCTGACG             TTCCTGTTTGAAAAG  81 8
        recQ 4752826 .. 4752838 -  -2.6   -2.8733   GGCGTCAGAAAATAC                CGGC AAATG GCCA                TATCACGACTCCAGT  40 28
HR116_RS21875 4751573 .. 4751589 -  -4.4  -2.55459   CACAGGGACAAAATC             GGCCATG GACT CA-GGCC              ACCACCTGGTTACGG  41 19
HR116_RS21870 4750333 .. 4750350 -  -5.7  -3.16683   ATTTCATTTGACTAA             TTATTAG TCGG CTAATAA              TGCCCGTCCAATTTC  51 91
HR116_RS21865 4749781 .. 4749792 -  -5.8  -4.34771   GAAAACCGACGAAAA                CCTC TGTA GAGG                 GCTTTCGGACGAAAG  71 97
HR116_RS21860 4747402 .. 4747453 -  -7.4  -2.82156   CGACAACGAATACGA CAGCGGCTACATCAACGCCG-CCA GCCTGA TGATCGGCTTCGATAC-GCCGCTG GGGCCGCTGACCTTC  52 111
HR116_RS21850 4744964 .. 4744979 -  -2.5  -3.63515   GTTGACCTGCAACAA              GCCAT GGGCGG ACGGC               AGCGGTTCAGCGGGA  49 32
        rfaD 4743485 .. 4743504 -  -9.2  -2.63073   GGTGGGCAACAACAT            CGTCGGCC GCCT GGCCGACC             GCCATACCATCGCGG  54 419
HR116_RS21790 4727221 .. 4727262 -  -8.7  -5.20222   ATTAAAGAAAGAAAA GCGAGCGAGAAGAGAAT CGGGAAAT ACGCTCTTCGCGCCCGC  CTTCGTATTTATCCG  93 53
HR116_RS21770 4722008 .. 4722031 -    -8  -4.56775   AGCGCCCTGGAAAAA          CGCGGCCTGC GCCG GCAGGTAGCG           CTGACCCTGCCGCAC  79 270
HR116_RS21760 NONE
HR116_RS21755 4718072 .. 4718086 -  -3.4  -3.73224   CCAGCGTGCAGCAAA               GCGCCG ACG CCACGC               GCAATACCTCGATGG  53 439
HR116_RS21720 4712510 .. 4712521 -  -5.8   -3.7108   AGCGGGACATGGAAA                TCGC CCAG GCGA                 TCATCGCGATGGCCC  57 238
HR116_RS21710 4708519 .. 4708544 - -16.1  -4.75404   AAAGCCGACGAAAAA         GGCCGTGGGGG GAAT CCTCCACGGCC          TTTTTTCTTTCAGCC 100 49
HR116_RS21695 4704305 .. 4704339 -  -2.7  -3.01712   GTGCGTCGGCGAACA    GGTCCATGGGCCGCAG GTTA CTACGCCGCAAGG-CC     GCTGCTGAAGCCTGG  41 51
HR116_RS21690 NONE
HR116_RS21685 4703136 .. 4703155 -  -9.2  -5.76949   CAGGCGCAAAAAAAA            CGGGCGAC CGAA GTCGCCCT             AAGTGCCTTGCGTGC 100 421
HR116_RS21680 NONE
HR116_RS21675 NONE
HR116_RS21670 4699902 .. 4699934 -  -5.4  -3.05596   GATGGCGCCACGCAA      GCGCTGCCGTTCAG TCCCC CTGCACGGTGACGC      TGGCGGTCATCCCGG  47 3
HR116_RS21650 4695179 .. 4695202 - -15.4  -5.40474   ATTCGGTCAAAAAAA          TGACCGAGAC ATTA GTCTCGGTCA           CGGTCTTTCCTGTCC 100 76
HR116_RS21645 4693289 .. 4693312 - -18.2  -3.33815   ACTGCCTGCAACGAA          GAAGCCCCGC ATCG GCGGGGCTTC           TTCAGGCAACGGCGG  93 43
HR116_RS21640 4692875 .. 4692894 -    -7  -3.34043   CGGAGGACGGGAGAA            GCTCCGGC CACT GCCGAGGC             GAAAAATATTCGGAA  55 129
        hrpA 4688789 .. 4688814 - -16.1  -4.94972   GACCAGAACGAAAAA         GGCGCGCCGGT TTCG ACCGGGGCGCC          TTTTTCATTTCGCGC 100 54
HR116_RS21625 4686495 .. 4686507 -  -4.7  -4.56597   CTGTTTCTCGAAAAA                CCTGC ACG GCTGG                CGTCCCTGTTCGCCG  74 216
HR116_RS21620 NONE
HR116_RS21615 NONE
HR116_RS21610 4683064 .. 4683083 -  -2.1  -3.05384   CCCCTTTGCATTCAA            GAGCTTT TGCATG AAGGCTC             TCTCTTCTGAAAATA  41 2
HR116_RS21605 4682778 .. 4682794 -  -4.3  -3.30124   GGCCAGTCTTTATAA              GCCCCTG GCT CAGGATC              TACCTCCCACTCTAC  48 49
HR116_RS21600 NONE
HR116_RS21595 NONE
HR116_RS21590 4679203 .. 4679230 -  -5.4  -3.32963   ACCGCGAGCTGAGAA        CCCGGATCGCCG CGGA CGGCAACGCGCG         CTTCCGTATCGTCAG  51 116
HR116_RS21580 4677982 .. 4677994 -  -4.7  -3.28712   GCTGCTGGCCTACAA                GGCCG ACC CGGAC                CTGCGCAACCTGGCC  49 317
HR116_RS21570 NONE
HR116_RS21565 NONE
HR116_RS21560 4675257 .. 4675285 - -25.3  -4.99134   AGCGGAAACGAAAAA        GCCGCCGCCCACG AAT CGCGGGCGGCGGC        TTGGTGTCGAGGATA 100 48
HR116_RS21555 NONE
HR116_RS21550 NONE
HR116_RS21545 NONE
HR116_RS21540 4672337 .. 4672368 -    -8  -3.68222   CTCCAATGCGAATAA      CGCGAAAAGCCC TCTACTAC GGGCCTTTCGGG       TTATTCGATATGGGT  65 48
HR116_RS21535 4670780 .. 4670799 - -11.4  -4.77157   GGAAGCGATTAAAAA            GACCTCGC CGGA GCGAGGCC             GAAAACAGGAGCAGA 100 54
HR116_RS21530 4669014 .. 4669040 - -19.4  -3.54307   AACATCCTGCGGAAA         CGAGCCCCGCCC GCC GGACGGGGCCCG         AGCGCCTCAGAACAC 100 32
HR116_RS21525 4668551 .. 4668565 -  -8.5  -3.53343   AATGCCTCGGGCAAA               CCCGG ACATG CCGGG               CCGCGCGAGGGGCTC  63 39
HR116_RS21520 4667483 .. 4667502 - -10.7   -5.0925   GCGGAAAAGCAAAAA            GCCTCGC AAATGA GCGAGGC             TTCTTGTGGGGTCCA 100 164
HR116_RS21515 4666958 .. 4666995 -  -3.3  -2.57931   GCGATCTCGCAGAAC   GCCGCGAGGACGAACCA GAGG TAGTTGATCACCGCCGC    CCGCCCTCCCGCTCC  39 16
HR116_RS21510 4666428 .. 4666438 -  -8.2  -3.82824   GATCACCCAGAAGAA                 CCCG CAA CGGG                 CCAGGGAACTCAACG  68 247
HR116_RS21500 4665715 .. 4665739 -  -5.6  -3.35679   GCGGGCGACTCACAA         GC-CCCGCCGA TCGC CCGTCGGGCGC          AGTTTCAGAGCCCGG  52 30
HR116_RS21495 4660979 .. 4660995 -  -8.7  -3.28712   GCTCTGCGTGGACAA              CGAGGAC AGC ATCCTCG              CCGGCATGAACAGCC  58 359
HR116_RS21485 4656983 .. 4656996 -  -9.5  -3.08464   GCAGGAGCGACGGAA               CCGGC TTCA GCCGG                TGAAGCTGGCTTCCA  60 18
HR116_RS21480 4656013 .. 4656028 -  -3.3  -4.08064   AAGTGGGGCGCAAAA              TTACG GCAAAT CGTAA               AGAACGTAAATACAA  58 65
HR116_RS21475 4653743 .. 4653771 - -16.8  -3.54475   GCGCCCATCATAGAA       CAGGCGTCC-GCG TTAC CGCAGGACGCCTG        TCGTCGGACGATGCG  91 60
HR116_RS21470 4651717 .. 4651735 - -17.4  -5.40474   AGTTCGCCAAAAAAA             GCCCCGGC ATC GCCGGGGC             TTTTTCGTTTCTGCG 100 47
HR116_RS21445 4648613 .. 4648623 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGT                 AACTTGCGAGATTGG  39 38
HR116_RS21440 4648443 .. 4648455 -  -3.3  -3.49182   AGATAGCAGAACGAA                CGCGT GGA ACGAG                GACAGAAGAACAGCG  49 113
HR116_RS21435 4647481 .. 4647501 - -18.3  -4.55128   ATCCGCAAATGAAAA            CGCCCCGTC ATG GACGGGGCG            TTTCATGCATCGCGG 100 49
HR116_RS21430 4646444 .. 4646454 -  -5.4  -3.53012   TCGCTGCCGGGGAAA                 TTCG CCG CGAA                 GATACCCGCGACCTG  54 295
HR116_RS21420 NONE
HR116_RS21415 NONE
HR116_RS21410 4644634 .. 4644685 -  -7.3  -2.54896   CTGCCAGGGAATGGA TGCCGCGCACCTGGCGACGCTGGCCT CCG AGGCCAA-G-CGCCAGGC-CAAGGCG GTGCCAGGCTACAGC  47 78
HR116_RS21395 4639648 .. 4639664 -  -9.4  -3.53091   AGGCTCGCTGCGAAA              GCGCGA GCGGA TCGCGC              TTTCCATCGCGTCGC  65 53
HR116_RS21360 4633296 .. 4633324 -  -3.7  -2.50016   CGGCAGTATGAACAT        GCGAGGGCTCC TTTTCCC GGAGCCCCATC        CTCGCAGAAGGTGCC  41 62
HR116_RS21355 4632335 .. 4632345 -  -8.2  -3.28712   GGTCTCGGCCGACAA                 CGCC CAT GGCG                 TACACCCGAACTACG  58 424
HR116_RS21325 NONE
HR116_RS21320 4625849 .. 4625864 -  -6.8  -3.53012   TCGGCGCCGTGGAAA              GGC-CGG ACA CCGAGCC              GCACTACTACGACCT  58 411
HR116_RS21295 4621456 .. 4621483 - -24.2   -4.8622   TTCGGCAAGGAAAAA        CGCCGTGCCCGG TTGC CCGGGCACGGCG         TTCCCCGATCGAACC 100 48
HR116_RS21290 NONE
HR116_RS21285 4619272 .. 4619300 - -19.6  -4.06502   GACGCTGAAACGAAA       GGCGGCGGACCGG AAAT CCGG-CCGCCGCC        TCGGGCTACGTCTTC 100 50
HR116_RS21280 NONE
HR116_RS21275 4616737 .. 4616754 - -12.7  -3.55444   GGCTCATGGGGCAAA             GGGCGGA AGAT TCCGCCC              TTGTAGTTCTCGACC  77 84
HR116_RS21270 4616419 .. 4616433 -  -3.4  -5.08824   GGTCGATGGAAAAAA               GCGCCC GGC GGACCC               GCGATGAAACCGCCC  78 138
HR116_RS21265 4614798 .. 4614817 -  -4.3  -3.64703   TTTCCGCCAGCGAAA            CGGTGTTC TTATC GAAC-CCG            TGCCCCGGCTCGATC  53 448
HR116_RS21235 4609795 .. 4609833 -  -4.7  -2.64243   GGACACGGGACATGA  CTCGACCTCCACCCACTGC GCT ACAACGA-TGGAGGT-GAG  GGTAGAGAATGATTA  43 131
HR116_RS21230 4609102 .. 4609138 - -10.9   -5.8187   CAGTGAATAAAAAAA    CCCGGTCGAACAC GCGGGGGGAAG GGGTTCGACCGGG    TGCTGCGTCCAATCA 100 38
HR116_RS21210 NONE
HR116_RS21205 4604579 .. 4604597 -  -6.7  -3.15544   CCGCATGGGCATCAA            CACCG-GC TATT GCACGGTG             GGCAACTTCGGCGCC  52 390
HR116_RS21190 4601472 .. 4601495 -  -4.4  -2.84051   GCACGGCGACGAAAT          CAGCGTGTAC CAGG GCGCGCGCTG           GAGCGATCCGGCGCC  44 421
HR116_RS21160 NONE
HR116_RS21155 4595558 .. 4595581 -  -6.6  -3.63515   GGCCAGGCGGAAGAA          GGCCGGCG CTGGCTGC CGGCGGCC           GTGGAAGCCGCCCGA  59 120
HR116_RS21115 NONE
HR116_RS21110 4589133 .. 4589151 -  -3.7  -3.13522   AGGCCTCGAGGAAGA             CCTCCAG CGCGT CCGGCGG             GATATAGAGGTCCTG  47 186
HR116_RS21105 4588348 .. 4588375 -  -4.7  -4.11484   CGGAAGCTCGGAAAA        GGCGACCGTCC GCAGGA GGACGAACGGC         CAGCGGCGCGCTCAC  65 37
        scpB 4587192 .. 4587221 - -11.3  -3.73224   CCAGGGTCGATGAAA       CGGAGCGGGCCGGC CTC GCCGGCGCGG-CCG       GATGAATTCTACAGG  76 53
HR116_RS21095 4586607 .. 4586639 -  -7.7  -3.09516   GCGTCCAGGAGGGAA     TGACTATCGGGCCG ATCGAG CGGCCCG-CGGTCA      CTCGGCCTCGGCGTC  54 23
HR116_RS21090 4585961 .. 4585991 -  -9.7  -3.15861   GATGATCCCCACCAA      GACCGGCGCCG-CCG AGG CGGTCGGC-CTGGTC      CTGCCGGAACTCGCC  59 374
         edd 4583334 .. 4583356 -  -8.3  -2.98823   GTTGCCGGAGAGACA           GCCGCCAGC CAAGC GCCGGCGGA           TATCGACCTATCAGA  57 42
HR116_RS21075 NONE
HR116_RS21070 NONE
HR116_RS21065 4580012 .. 4580026 -  -2.7  -3.48276   GCGGCTGCCACAGAA               CGCGG GAGAA CCTCG               TGCCTACCTGCCTCG  47 66
HR116_RS21055 4578207 .. 4578229 -   -17  -2.60244   GTGCGAAGGAACCCA           CCCGTGCCGC TCG GCGGCACGGA           GCCAGTCGGGAGGAT  83 76
HR116_RS21050 NONE
HR116_RS21045 NONE
        ugpC NONE
HR116_RS21035 4573748 .. 4573777 - -14.3  -5.40072   GTCGCCGGAAAAAAA       CGG-CCCGCCCGAA ACG CTCGGGCGGGTCCA       GGCACAACACCGGAG 100 56
HR116_RS21030 4572730 .. 4572762 - -11.9  -3.44051   CCTCGACGAGGACAA      CTGACCGCCCGCCTA TTG CAGGCCGGCGGCGAG      ATTCAGGCGCATGCG  74 5
         zwf NONE
         pgl NONE
HR116_RS21010 4568802 .. 4568817 - -11.8    -5.626   GACGGCATAAAAAAA              CCCGGC CGAA GCCGGG               CATGCCCAGGCGGGC 100 45
        rluB 4566967 .. 4566982 - -11.8   -4.7497   CCCAGGCATGAAAAA              GGCCCC CGAA GGGGCC               TTTCCAGGGCGCTTT 100 45
HR116_RS20995 4566395 .. 4566419 -  -7.8  -3.20723   GCTCTACGAAGCCAA         GCGC-GACGGC CGCA ACCGCCTGCGC          TGCGCCTGAGGCTTG  56 138
        mtnA 4557162 .. 4557196 -  -9.3  -3.54408   CCTGAGGCAAACGAA    GTAGGTCGGCGCATGC CCGA GCA-GCGCCAACTCAC     TACAAATCAACGACT  68 168
        gyrA NONE
        serC NONE
        pheA 4552055 .. 4552072 -  -4.1  -2.90075   CTCTTCGGAATGACA             GCG-CGCT CAG AGCACCGC             TTTCGGATAGGAGCC  44 14
HR116_RS20930 NONE
HR116_RS20925 NONE
         cmk 4547713 .. 4547726 -  -9.5  -3.65529   ATACCTGTAGTCAAA               GGCCC GGAA GGGCC                CGATTCCGCATCACC  68 260
        rpsA 4545967 .. 4545998 - -19.6  -4.24123   CCAAGAAGGGGAAAA      CGAAAAAGGGCGGC CTAG GCCGCCCTTTTTCA       TGATGGATCAGAGAC 100 41
        ihfB NONE
HR116_RS20905 4545115 .. 4545125 -  -6.8    -3.224   CAATCGCTGATAACA                 GAGC CTA GCTC                 GCGACTCAGGATGCA  53 213
HR116_RS20900 4543782 .. 4543816 -  -4.5   -4.1899   TCACTTCATGTAAAA    CAGTTCTCAA-CCA AAATCCGA TGGATTGAAAACTG     AAAATCCCATTGACT  63 73
        tviB 4542480 .. 4542502 -  -5.7  -3.41126   TCACAAAGCTTACAA          CTGATCTTAC AGGC GTA-GATCAG           ACTTATCTTCATCGA  55 9
        tviC 4541369 .. 4541394 -  -8.3   -5.0925   TCTCAAAAGCAAAAA         TAGCGCCGCTC TTGG AAACGACGCTA          CTTTCATCCAAACGC  93 54
HR116_RS20885 4539628 .. 4539642 -    -5  -2.53911   CGAACTGGGAACGGA               TCTACC TTG GGTAAA               AGCCCGAACCCGCAC  43 183
HR116_RS20880 NONE
        asnB NONE
HR116_RS20870 NONE
HR116_RS20865 NONE
HR116_RS20860 NONE
HR116_RS20855 NONE
HR116_RS20850 4530190 .. 4530218 - -16.1  -4.42653   ATCGTACGGAGAAAA        CAAAAAAGGCCGC TAG GCGGCCTTTTCCG        GAGAACGATGACTCA 100 38
HR116_RS20845 4529647 .. 4529668 - -12.9  -3.85909   GGAGCCAAATTCAAA           GCCCTCGGC ACAT GCCGGGGGC            TTTTTCGTTATCGGG  83 68
        uvrB 4525885 .. 4525905 -  -2.3  -3.15544   CCGCAGGTCGACGAA            CGCCTCGCG CAA CTCGCCGCG            CAACTGGGCAGCCAG  42 218
HR116_RS20815 NONE
HR116_RS20810 4520916 .. 4520941 - -17.6  -4.56597   CCCCTCCCCCAAAAA         CGAGGCCCGC AACTGG GCGGGCCTCG          TCATCGACTGTGGGA 100 50
HR116_RS20805 4520670 .. 4520683 -  -3.7  -3.68023   AATCCGCAAAACCAA               CCGCG TATT CCCGG                CAATTTGGTGGAGCT  56 31
HR116_RS20800 4520564 .. 4520574 -  -2.4  -3.39717   ACGGATGAACATGAA                 GTGG CGT CCCC                 TAGGGGACTCGAACC  47 16
HR116_RS20795 4520371 .. 4520387 - -13.7  -3.67175   ACCTTCGAAAAGTAA              GGCCAGC GAT GCTGGCC              TTGGAATGTGGTGGA  81 34
HR116_RS20790 4520222 .. 4520246 - -16.5  -5.43553   AGGGAAAAAACAAAA          GGGCCATTCCA ATT CGGAATGGCCC          TATAGAGCCCCGCAG 100 53
HR116_RS20785 NONE
HR116_RS20780 4518612 .. 4518650 -  -7.3  -3.59979   CTCCTCGATTCGAAA  CGGTTCGCCCCGC-CGGA TCGC TCCGCGCGGGCCACAGCG   CTTTTTACCGAAGAA  62 79
HR116_RS20775 4517949 .. 4517963 -  -2.7  -2.52933   TCCCAATTCATCAAT               GCTGC TCCAG GCTGC               CGGCCAGTTCGCGCG  37 6
HR116_RS20770 4517433 .. 4517470 - -16.3  -4.12188   CCACTACCTCGAAAA   TGACAGGCGGCGGATTC TAGA GAATCCGCCGCCCGGAA    CAAAGTGCGAATGCC 100 62
HR116_RS20765 4516454 .. 4516468 -  -5.6  -3.05463   AGGCCTGGTACGCAA               GCTAGG CCG CCTGGC               TGAACGACACCTGCA  49 12
HR116_RS20750 4514229 .. 4514244 - -11.8  -5.41359   AACGAAATGAAAAAA              GGCGCC CGAA GGCGCC               TTTTTTCGATCACCG 100 48
HR116_RS20740 4511827 .. 4511837 -    -4  -3.16921   ATGAAGCGCTAGGAA                 GAAA AGG TTTC                 GGCCGCGGAATCGGC  47 45
HR116_RS20735 4511101 .. 4511131 - -11.2  -2.80492   CATGAGCACCAACTA       CCTGGAGACCATCA AGA TGATGGTCTCCATC       GGCCTGGCCTGGAGC  60 310
        leuC NONE
        leuD 4508143 .. 4508172 - -21.5  -4.83169   ACTCCGGGAGAAAAA       CCGGGCGCACCCT ACCC AGGATGCGCCCGG        CAAGGGGACTCGCGT 100 46
HR116_RS20715 4507330 .. 4507348 -  -8.8  -3.07816   CCTTCATTCATTGAA             CGGCGG GCATGCG CCGCCG             CGATCGAACCGTCAC  57 37
        leuB 4506178 .. 4506210 - -16.4  -2.64318   ATATGAGAGAAGTGA     GC-TGGCCGGCAGCCA TCA TGGC-GCCGGCCAAGC     CCGTCAGATTACAGA  80 34
         asd 4505005 .. 4505029 - -20.7  -2.54896   CGCCCAGGCAATCGA          GGCGCCGCCCA TTG CGGGCGGCGCC          GGATCGATCAGCGCT  91 33
HR116_RS20700 4503800 .. 4503857 -  -3.3  -2.80816   TCTCGATTCACGAGA GGGAGTGCGTCGGTGCTTGC-TGTCCG CTCGCC CAGCCATGCATGGACGGACGCTC-CCC GGCAGCAGCGGATCG  40 93
HR116_RS20695 NONE
        truA 4500105 .. 4500136 - -10.9  -4.26903   TCGATGGTAGCAAAA      GCCCGAT-TCGACG TCAGC CGACGATATCGGGC      AATCCGGAAAGGAAA  89 7
HR116_RS20685 4499312 .. 4499334 -  -6.1  -2.61695   GCTATCGCGAAATAT           CTGGCCTCC CTATC GGCGGCCGG           GCGTTGTCGCGGAAA  46 84
HR116_RS20680 4498245 .. 4498258 -  -3.1  -3.06133   CAATCGGCCAGGGAA               CGC-TG GGT CATGCG               GATACGGGGCTCGGC  43 19
        folC NONE
HR116_RS20670 4496265 .. 4496296 - -11.5  -2.79796   CTGCATTTTAGCAGA      GCGCG-CCCGCGAC GGTAA GCCGCGGGTCGCGG      TCAACCGCGTTCCGG  63 26
HR116_RS20665 4495645 .. 4495677 -  -9.8  -4.07568   CGCCGCCCTGGAAAA     CCGCGGGAC-CCGGC CTCG GCCAGTGTCCCGCCA      AAATCACTGGCTGGG  78 29
        purF NONE
HR116_RS20655 4492731 .. 4492749 -    -3  -2.78384   TTGGGTTCGATCACA             GCGCGG CCAGCCC CCGAGC             CATGTCGGCCTTGAG  40 2
HR116_RS20650 4491914 .. 4491939 - -16.9  -5.58454   CTCATACGAAAAAAA         GGCGCTGCTCC TTTC GGAACAGCGCC          TTTTCCGCATCTCCC 100 48
        gspE NONE
        gspF NONE
        gspG NONE
        gspH 4485253 .. 4485279 -  -3.6  -3.58343   TCCAGCAGGGTGAAA        CCGCGCGCGCG CCTCAT CGC-CGCGCCA         CCTCGACCCGTGGCA  51 12
        gspI NONE
        gspJ NONE
        gspK NONE
        gspL NONE
        xcpZ NONE
HR116_RS20590 4481264 .. 4481274 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGT                 AACTTGCGAGATTGG  39 38
HR116_RS20585 4481073 .. 4481083 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TGC GCGT                 CGGCTGGGCAAGATG  39 136
HR116_RS20580 4480939 .. 4480969 - -20.6  -3.68529   AGGGGACGACGGAAA       CGAAAAAAGCGGCC ATT GGCCGCTTTCTTCG       TGGCTCACCCCGCCT 100 59
HR116_RS20565 4476239 .. 4476294 -  -4.9  -3.39327   GGGCGATACGCAGAA CCTG-TGCG-AGCTGGAGAAAAGCCGTT TTC AACGCAGTTTCTCC-GCTACGCAACAGA TCGCGGAAAGGCTCT  50 40
HR116_RS20560 NONE
HR116_RS20555 4473124 .. 4473141 -  -6.9  -2.62184   CCTCTGCCGACACCA             GTTGCCG CTGG CGGCGAC              CCGCGAGGGTCGCCA  47 480
HR116_RS20545 NONE
HR116_RS20540 NONE
HR116_RS20535 4469763 .. 4469773 -  -6.8  -3.12351   GCGGCGCACATCGAA                 GCTG CCG CAGC                 CCCTCGCTCAACGGC  53 33
HR116_RS20530 NONE
HR116_RS20525 NONE
        pepN 4465872 .. 4465902 - -16.2  -4.36596   CCCAGAAGTAACAAA       GGGCGTTACCAGCC AGT GGCCAGTAACACCC       TCTTCCGGGTGAAGC 100 48
HR116_RS20515 NONE
HR116_RS20510 4462062 .. 4462104 -  -6.1  -3.05384   CCTCCCCGGAGGGAA GCGGTCGGCGCCGGC-GAGCG GAG CGATCAGCGGGTGCCG-CGGC GGCGCAGGGCCGAGG  49 9
HR116_RS20505 NONE
HR116_RS20500 4458377 .. 4458394 - -14.1  -5.60993   CTCCGCACAAAAAAA             CCGCGGC CTGG GCCGCGG              TCTTGGCGGGGCTCG 100 48
HR116_RS20450 4447077 .. 4447094 -  -5.5  -3.14132   CGCTGCGTCCATGAA             GTTCAGC AGAA GCTGAGC              ATTAATCCAGGCAGG  51 180
HR116_RS20445 4442067 .. 4442090 - -15.3   -3.9941   CGCGCCAGAATGAAA          GAGCCCCGC ACTCAG GCGGGGCTC           TTGCTTGCCGTCAGG  95 50
HR116_RS20440 NONE
HR116_RS20435 NONE
HR116_RS20430 NONE
HR116_RS20425 NONE
HR116_RS20420 NONE
        pelF NONE
        pelG 4429297 .. 4429326 - -12.2  -5.95539   CGTGAAACAAAAAAA       GGGGCCGATTCA ACCGGG TGAATCGGCCCT        TTCTGAAAGACCCTG 100 57
HR116_RS20405 NONE
HR116_RS20400 4426598 .. 4426612 - -12.8  -3.09516   GCCGCCAGGACGCAA               GCGCGC ATG GCGCGC               GCCGCCCTTGACGGC  71 265
        radC 4425972 .. 4425985 -  -9.5  -4.72986   CAGGCGCAGCAAAAA               GGGGC CGAA GCCCC                TTGGGCTAGATCAGC  93 31
HR116_RS20385 4422210 .. 4422239 - -13.5  -4.21974   GCAGCAGCGAAGAAA       GCGACAAGGGCTG CTGC CTGCCCCTGCCGC        GTGGGGATTCAGGCT  93 34
HR116_RS20380 4420058 .. 4420081 - -17.4  -3.36749   CATCCTCAACATGAA          GCGCCCCGGC CGGA ACCGGGGCGC           TATCTACGGTGCGAA  91 42
HR116_RS20375 4419749 .. 4419774 - -23.3  -3.68351   CTTTGAGCAGTGAAA         CCGGGCGCGGC CACC GCCGCGCCCGG          AGTTTTCGACCACCG 100 78
HR116_RS20370 4418557 .. 4418585 - -12.3  -3.60792   GGGCGAAGCCCGAAA        GCCCGGCGGCGCT TAC AGCGCCGACACGC        CACACACCGCTCGTT  75 189
HR116_RS20360 4417307 .. 4417323 -  -3.7  -3.55563   AGTGCATTGCCGAAA              TCGTC TAAATGC GACGA              CTGCACCGCCCGGAA  53 210
HR116_RS20355 4416345 .. 4416358 -  -6.7  -4.16842   GGCACTCTCAAGAAA               GCAAG GCTT CTTGC                TAAGGGACGATTCGC  69 62
HR116_RS20350 NONE
HR116_RS20345 4414909 .. 4414924 -  -6.8  -3.57144   CCTCCGAGCTGGAAA              GC-CGGC CTG GCCGTGC              CGTTTCGTGGTTGTC  59 228
HR116_RS20340 NONE
HR116_RS20335 NONE
HR116_RS20330 NONE
HR116_RS20325 4412729 .. 4412765 - -15.2  -2.52464   GCTGCGCCGAAGGCA   GCGCGAAGTGC-GGTGC GAAT GCACCCGCACTGCACGC    GCGACGACACGGCGA  76 109
HR116_RS20320 4410057 .. 4410082 -  -8.2  -3.04144   GTTCCAGCTCGAATA         CCGCGGCACT GAAGCG ATCGCCGCGG          TTCGGCTCGATGTGC  55 340
HR116_RS20270 NONE
HR116_RS20265 NONE
HR116_RS20260 NONE
HR116_RS20255 4397179 .. 4397199 -  -5.3  -3.87815   GCGCATGCTTACAAA            CCGCCGG CGACGAT CCGGCGC            AACTGGATCCAATCC  60 299
HR116_RS20235 NONE
HR116_RS20230 NONE
        trbB NONE
HR116_RS20220 NONE
HR116_RS20215 NONE
HR116_RS20210 NONE
        trbJ NONE
HR116_RS20200 NONE
        trbL NONE
HR116_RS20190 NONE
        trbG NONE
HR116_RS20180 NONE
HR116_RS20175 4382554 .. 4382579 - -19.1  -3.45945   GGCATCCAGAATGAA         GAACGCGCAGC CTGG GCTGCGCGTTC          GATGGATGCCGTTGA  95 57
HR116_RS20165 NONE
HR116_RS20160 4380762 .. 4380803 -  -2.2  -3.85698   GCCGCCTTCGACAAA CGCCTGCGCGA-GGACAAGG CCTT CGCCGCCGATC-CGCAGGCG CGCCTGCAATGGTTC  54 220
HR116_RS20140 NONE
HR116_RS20135 4374970 .. 4374992 -    -9  -3.08471   TAGAACTCCAGTTAA           TCCGCCACCG CAA CGGTGTCGGG           CGAGGGTCGTCACGC  60 429
       rlmKL 4372408 .. 4372435 -   -22  -5.55664   GCAGTACGAAAAAAA        GGCCGCCAGCGG TTGC CCGCCGGCGGCC         TTTTGCATGAATGCC 100 48
HR116_RS20115 4370265 .. 4370298 - -10.3  -3.11564   GAAAGGGAGGGAAGA     CGCGACCGCCATCC TCGGGCG GGATGGCGG-CGCT     ATCGCTTAGAGCTTC  64 31
HR116_RS20110 NONE
HR116_RS20105 4366980 .. 4367032 -  -4.8   -3.5394   AAATGGCCCGGGAAA TGACCG-GACGCT-CGAGCCCCTCCT GAA AGGAAGGGCTCATACCGCAGCGGCCG CCAACTGCTCCTGGA  55 9
HR116_RS20080 4362712 .. 4362733 - -15.9  -3.33696   CCGCGGCGGAACGAA           GAGGCCACC CTTG GGTGGCCTC            TTTCATGGCGGGATG  84 121
HR116_RS20055 NONE
HR116_RS20050 4357655 .. 4357701 -  -4.3  -3.96827   AAAACCATTGAGAAA CGC-CTATGCATCGCTTCGCCA GCAT CGCCGAAGCCAGGCACCGCGCG GCATGGGGGAAGGAA  61 115
HR116_RS20045 4355975 .. 4355991 - -10.8  -4.61231   CCATATCCCGAAAAA              CCCGCC TCAAC GGCGGG              TTTTTTATTGCCTGC  95 54
        moaB NONE
HR116_RS20020 4352937 .. 4352956 - -16.4  -3.50853   GCGGCGCAATGAGAA            CGGCGGCC ATCC GGCCGCCG             TCGGCTCAATCGAGC  89 31
HR116_RS20010 NONE
HR116_RS20005 NONE
HR116_RS20000 4346950 .. 4346960 -  -2.4  -3.05816   GTATCCGGGACGGAA                 GTGC GGC GCCC                 GGTTCAGGCAGGGTA  41 29
        yegS 4345883 .. 4345909 -  -5.9  -3.19789   AGACGGAACATGGAA         CCAGCATCCTT GGTGG AAAGATGCTGT         TATACGGTGTCGCGG  51 97
HR116_RS19990 4344843 .. 4344860 -  -3.3  -3.88559   AACGACGGCCAGAAA             GCCCTGC TGAA GAAGAGC              CAGATCGCCTGGATC  56 237
HR116_RS19975 4340469 .. 4340490 -  -5.9  -2.65264   GGATCATCGAGATGA           GCCGCTATCA CAT TGAT-GCAGC           TCACTTTTTCGAGAT  46 44
HR116_RS19970 4339492 .. 4339510 -  -6.6  -3.73072   AACCGCGCCAGGAAA             TCCACCGC CTC GCCGCGGA             ACAGGCCTGCGACCT  59 188
HR116_RS19960 4338178 .. 4338196 -  -6.6  -4.19238   CCTGCAACGGGAAAA             CGCCGCCA CGG TGCCGACG             CTCACCGAGCAGAGC  70 393
        fadB NONE
        fadA 4333903 .. 4333933 - -16.9  -4.71061   ACTGACACTGAAAAA       CGAAAGCCGGGGC ACGAG GCCCCGGCTTTCC       CCTTCGACGAACGCT 100 40
HR116_RS19940 NONE
        topA 4330763 .. 4330787 - -11.4  -3.40403   CTTCGCGCAGTATAA          GCGCGCCC CATGCAAGC GGGCGCGC          CATCCATCAGCGCTT  71 32
HR116_RS19930 4330115 .. 4330153 -  -6.9  -3.51232   TTGCTGGCAAATCAA  CCGAGTGGAACGGTAGGAA AAT TTCCTACCGCTG-A-TCGG  CGAATGACGACGGCG  57 41
HR116_RS19925 4329552 .. 4329601 -  -6.1  -3.51825   GCAGGCGAAGGACAA CGCCGCTGCCCTGGCGCTCAG TTGCGAGG CCTTGCGCCTGGGCCGCAGCC ACACCGTGGTCAGTT  56 154
HR116_RS19910 4327639 .. 4327656 - -14.1   -5.4182   AAGGAGAAAGAAAAA             CGGCGCC CTGG GGCGCCG              TCTGCAATCAGGCCT 100 33
        nagZ NONE
HR116_RS19900 4325677 .. 4325692 - -11.8  -4.74706   CGCAATAGCGAAAAA              GGCCGC AATA GCGGCC               TTTTTTTCGTTGCGA 100 48
HR116_RS19885 4319936 .. 4319955 - -11.4  -5.07011   CACAGAAATGAAAAA            CGGGAGCC CGAG AGCTCCCG             TTTTCCTCTACGCCT 100 47
HR116_RS19880 4318429 .. 4318446 - -12.7  -4.98531   GTGCGAAATGAAAAA             CGGGAGC CGAA GCTCCCG              TCCCGCGCCACCCGC 100 45
HR116_RS19875 4316866 .. 4316876 -  -2.4  -2.66272   GGTTACGCAAACCCA                 TGGC TCA GCCC                 TCCTGCTCGATGCGT  38 19
HR116_RS19870 NONE
HR116_RS19865 NONE
        nqrD NONE
        nqrE NONE
        nqrF NONE
HR116_RS19845 NONE
        nqrM 4310989 .. 4311012 - -13.2  -3.53012   GGCGCCTCCGGCAAA          GCCGCTGCACA ACA TGTGC-GCGGC          GGATCGATTCGATCA  76 132
        sthA 4309109 .. 4309132 - -15.2  -3.15621   AACTGGAAGTGAAGA          GCGCCTCGCG CGAA CGCGCGGCGC           GGACGGTAACGCGGA  76 439
HR116_RS19815 NONE
        lolD NONE
HR116_RS19805 4304399 .. 4304429 - -16.2  -4.86731   TCTCCGTAAATAAAA       CACCCTGCCAAAGC CTA ACCCTGGCAGGGTG       TGGGGGTGACCATCT 100 103
HR116_RS19800 4303311 .. 4303329 -  -3.1  -4.08767   TTCAGCGTCGCAAAA             CCTGAAA GGGTG TTTCGGG             GTACAGCTGTATCCG  58 46
HR116_RS19790 NONE
HR116_RS19785 NONE
HR116_RS19780 4299046 .. 4299056 -  -2.4  -2.71763   CGGAGAACGACATCA                 GGGC TTG GCCG                 CCGTGTTCTCGACCG  39 12
HR116_RS19775 4298028 .. 4298042 - -12.8  -2.68942   AGTCCTTCATACAAT               GGCGGC ACG GCCGCC               GGTCAGCGCGCCAGG  68 28
HR116_RS19770 NONE
        kdsB NONE
HR116_RS19760 NONE
        murB 4295536 .. 4295554 - -14.6  -4.93968   ACGCACAATGAAAAA             GGGATGCC GCC GGCATCCC             TTTTTCATTCTCCAG 100 49
        rluC NONE
HR116_RS19740 NONE
        sppA 4289008 .. 4289031 - -18.2  -4.05033   GGCATTCCATATAAA          GAAGCCCGGC TTCG GCCGGGCTTC           TTTATATAAGGAAGG 100 50
HR116_RS19725 NONE
        rpmF NONE
        plsX 4286489 .. 4286510 - -10.1  -3.48276   GCTCGTCGGAGATAA           CGCGCCAGC CGCG ACTGGCGCA            GGAAACTGAGTGTTG  68 70
        fabD NONE
        fabG 4284576 .. 4284595 -  -4.2  -3.10775   ACTCCTATGGAAAAT            CCGAGCAGC TGG GCTGCG-GG            TAAGTGTATAGAAAG  45 175
        acpP 4284252 .. 4284288 - -18.2   -3.5774   AGGTAAGGCGCTAAA   GAAAAGCCGCAC-GCCC TTAC AGGCTGTGCGGCTTTTC    CACGTCGGAAAATCC 100 50
        fabF NONE
        pabC NONE
        mltG NONE
HR116_RS19680 NONE
HR116_RS19675 4279422 .. 4279438 -  -2.1  -2.75074   GCCAGTCGAATATCA              GCGGGAT TCT AGCCCGG              CCCGGGCAGGCTTGC  39 17
HR116_RS19670 NONE
HR116_RS19665 4278112 .. 4278144 -  -2.6  -3.77831   TGACCAATACTGAAA     GGTAC-TGGCGCGCG GTAT CTCCCCCCAAGTACC      CAGCCAGTGAAGGTA  52 130
HR116_RS19655 4276126 .. 4276157 - -16.6  -3.34398   CCCTGCCGGCAAAGA      GTGCGCGGGGCGCAG TGA CTGCGTCCCG-GCAC      CACAGGTATCAGGCG  88 34
HR116_RS19650 4275086 .. 4275102 -  -2.2  -3.04398   CCGGCGTCGGAAAAC              CGGC GAATGACGA GCCG              ATGCAGCTTCCGCGC  41 43
HR116_RS19645 NONE
HR116_RS19640 4273826 .. 4273841 - -10.4  -5.01042   AAGGCAAACGAAAAA              GGCTCC CTCG GGAGCC               TTTTTTCATGCTGCG 100 45
HR116_RS19630 NONE
HR116_RS19625 4270118 .. 4270135 - -12.7  -5.71712   CCGGACATAAAAAAA             CCCGCTC CGGG GAGCGGG              TCTTGTCGGCTTGGA 100 48
HR116_RS19620 4268708 .. 4268737 - -19.3  -4.07568   GCCGGTCGCTGAAAA       CGCGAACCGGCGC CTGG GCGCCGGTTCGGG        GGAGCGGGAGCCGTC 100 65
        cobW 4263754 .. 4263788 -   -20  -3.69395   GGTAGGACGCAAGAA     GCTGGGGCCGGCGA ATCGCCA TCGCCGGCCCCGGC     CGGGGATCACGGATC 100 39
        cobN 4259465 .. 4259490 -  -8.9  -3.61398   GGTGGGCTTCAAGAA         CGGCACCGACG GCGG CGTCGGCATCG          CCTGCGACGCGATCC  62 515
HR116_RS19575 NONE
HR116_RS19570 4256491 .. 4256501 -  -5.4  -2.84634   GGCGACATGAGGATA                 TCTC CGT GAGA                 TGGATTGGCTGGATC  46 129
HR116_RS19565 4255080 .. 4255093 -  -8.1  -3.36749   CATCGCCAACATCAA               CCAGG ACGC CCTGG                AGATCCACAGCGACG  59 276
HR116_RS19555 4251652 .. 4251672 -   -14  -4.49389   AGCGCACAACGAAAA            CGGCCCTC GCAAG GAGGGCCG            TCGTTCATCGCGGCG 100 45
HR116_RS19525 4245707 .. 4245736 -  -3.4  -3.04322   CGCAAGCCTGGAACA       CCTGGACCCGTC TCGCCG GACAGGCGCCGG        CGACGACCGAAGGGC  42 281
HR116_RS19515 4244346 .. 4244359 -  -3.7  -3.53012   CGGCCTCGCTTCAAA               GGCGG CAAG CGGCC                ATCAGTGGTCCATGC  51 41
HR116_RS19500 4240738 .. 4240758 - -10.4  -3.13403   CGGCGGCCAGCAACA           GCGCGTGGC GATC GCC-CGCGC            CCTGGCCATGGAGCC  62 312
HR116_RS19470 NONE
HR116_RS19465 4233644 .. 4233683 - -12.8  -2.58272   TACACCACCAAGTGA  CCCAGCGTCCCGGTCGCCG CCA CGGCGACCGGCAC-CTGTC  CGGGAAAGACCCCAT  67 308
HR116_RS19450 NONE
HR116_RS19445 4231169 .. 4231200 -  -7.9  -2.56596   TTTGTCAGGAAGCTA      CCGGACCGCCTCAG AGCAG CAG-GGCGGCCCAG      GCCGATGCCAGCAAC  51 4
HR116_RS19440 4230201 .. 4230214 -  -6.7  -3.27951   CAGCTGATCAGAACA               GATCC AGCG GGATC                TTCAGGTAACGCACC  55 4
        mntP 4223800 .. 4223816 - -10.1  -2.66249   GGTGAGCAAGAACAG              CGGTAGC CAG GCCACCG              AGCCGAAGCTCCAGG  57 217
        cobG NONE
HR116_RS19390 NONE
HR116_RS19385 NONE
        cobJ NONE
HR116_RS19375 NONE
HR116_RS19370 NONE
HR116_RS19365 4213917 .. 4213943 - -15.9   -5.0538   CGCCAGGCGAAAAAA        GCCCCGG-ACCC TTTG GGGTACCGGGGC         TCCCTGCGGCAGCGC 100 46
HR116_RS19360 NONE
HR116_RS19355 4212600 .. 4212623 - -13.8  -5.13722   GCGAGGAAAAGAAAA          CCCGGTCGGT CGCC ACCGGCCGGG           TGCGGGCGGGAAATA 100 80
HR116_RS19350 4210781 .. 4210814 - -14.5  -3.72576   GGCGTCGCCACGAAA     CGCCCGGGCCGTCGCC AGA AGCG-CGGCCGGAGCG     GCTATCGGTAGACAT  88 228
        sbrI NONE
        sbrR 4209293 .. 4209348 -  -4.4  -3.29511   GTCATGCGCGGATAA CCGC-TTGATGTCAGCCCGCGACGCCG CCG CCGCGTCGCGGGCCATGGTCGTCACGG CCGTTTCCTGGCGCT  48 20
HR116_RS19335 4208195 .. 4208205 -  -8.2  -4.11692   CACCGAGGTGGAAAA                 CGCC CTC GGCG                 CCTTCGACGGGGTCG  72 395
HR116_RS19290 4195980 .. 4195994 -  -2.8  -3.23216   GTCGATCATGACCAA               TGCC GCGAGCT GGCA               GCCGAAGTGGCCGGA  46 360
HR116_RS19275 NONE
HR116_RS19270 4192667 .. 4192710 -  -6.5  -3.53224   CACGCCTGGTGGAAA GCC-GCCAGGCCAAGGCCGC CGGTT GCGACGCCGGCTAGGCCGGC GTTCAGGCCGTCAGC  57 28
HR116_RS19260 4190761 .. 4190778 -  -9.1  -3.14132   CTGGTTCGCCAGGAA             CGCCGAT TTCG ACCGGCG              CTTCCGCGAGCGCTT  59 499
HR116_RS19250 4189578 .. 4189605 -  -3.4  -4.27316   GCGGCGAATCGAAAA        CGGCGCGCATTGT CGC AGAATCCG-GCCG        TTTGCCGTAGCCCGG  64 69
        pyrF 4188652 .. 4188685 -  -3.7  -3.63744   TTTCCGGGGAAAACA     GCGAT-CCTACTGGCC TGG GGCCAGCCGGCAAGGC     ACTTGCAATTTTTCC  53 194
HR116_RS19240 4187712 .. 4187728 -  -2.2  -2.79183   CGCAGGCGCATCAGA              GCGC CGGGACTTC GCGC              AGCAGCCATTGCACC  39 4
HR116_RS19235 NONE
HR116_RS19230 NONE
HR116_RS19225 4183962 .. 4183979 -  -4.8  -4.57073   GATCCTTGGGAAAAA             GCCGAT CGGAAT ACCGGC              GGCCTCAGTGCTCGG  74 30
HR116_RS19220 4183018 .. 4183054 - -14.3  -3.58343   GGGACGACCTGGAAA    GCCTGCTGGTGCGCGCC GAC AGCGCGCTCTACCAGGC    CAAGAGCGGCGGGCG  78 77
HR116_RS19190 4176310 .. 4176350 -  -5.1  -3.70446   CTATAGGCAAGATAA TTCGATATTAA-AAC-CGT AAAAA ACGCGTTATCAATATCGAA TTTATAGATTATTTT  58 34
HR116_RS19185 4175780 .. 4175805 - -16.1   -4.8622   CGCCGCAACGAAAAA         GGGCGGCCACC CGAA GGTGTCCGCCC          TTTTTCGTCGCCAGC 100 46
HR116_RS19165 4172209 .. 4172230 -  -4.3  -3.36452   ACCCTGGAAGACGAA           GACGGCGAG CAGG CCCGCTATC            GCATCGTCGGCCCCG  51 208
HR116_RS19145 4168050 .. 4168060 -  -2.4  -2.92667   GGAAGTCTCAAAGCA                 GCGG TTT CAGC                 GTCGGCCAGACATTT  40 7
HR116_RS19140 4167671 .. 4167689 -    -3  -3.82031   TGAAGGAGTAGGAAA             GACAGTGT AAC ACCCCGCC             AGGTTTCACCGGGAG  54 44
HR116_RS19135 4166613 .. 4166637 - -17.2  -5.14563   CCGGGCATGAAAAAA          CCCGCGTACC TTGCG GGTACGCGGG          CCTCTGCCTCGACGC 100 47
        earP 4164483 .. 4164499 -  -2.1  -3.51847   AAAGACAAAAAATCA              GGCCGCG TAT CATAGCC              AATCTGCGTAAAATT  47 18
         efp 4163836 .. 4163867 - -17.4  -3.63627   GGCGGACAGCGGAAA      CGAAAAAGCCCGGC GAAT GCCGGGCTTTTTCT       CGTCGCGCGAAAGGA 100 41
HR116_RS19095 4160829 .. 4160849 - -12.6  -2.61264   CCGGTCACCGAGAAG            CTCGCCGA ATACA TCGGCGAG            GGCTTCCGTCTCTGA  67 42
HR116_RS19085 4159621 .. 4159631 -  -5.4  -2.78547   CCAGTCGATGAAGGA                 GACT GCG AGTC                 TATCGTGCCCCCGCC  44 74
HR116_RS19080 4158198 .. 4158241 -  -5.4  -4.10161   GATGACCGGGCAAAA CGTCACCGAGTGCATCGG-CG GTTCG CGACCGAT-CAC-CGAAGACG GCCTCAGCGACCGCT  64 173
HR116_RS19070 4155563 .. 4155605 -  -7.7  -3.33696   CCGGCGTCCAAGCAA GCCGCTGGTGGTGGCCGT-GC AAG GCTACTGCTA-CACCATCGGC ATCGAACTGATGCTG  56 498
HR116_RS19060 4153208 .. 4153225 - -14.1  -4.74801   CAAGCCCATGAAAAA             GCCCCGC CGAA GCGGGGC              TTTTGTTCATCGCGC 100 47
HR116_RS19025 4145204 .. 4145214 -  -2.4  -4.57073   CATTCGTGGGAAAAA                 CCGC AAG GTGG                 CGACAATCGGCCGGC  68 44
HR116_RS19020 4144497 .. 4144518 - -18.7  -2.74605   TCCGCTGAAAATGGA           CGGGGCGCC GCGC GGCGCCCCG            TTTCAGCCTCTCTCC  87 28
        msrB 4139884 .. 4139906 -  -7.7  -4.88407   TGATTGAATGAAAAA           CGACCCG AACCAAAGA CGGGTCG           TCGCTCTCTAGCTCT  88 33
HR116_RS18990 NONE
HR116_RS18985 4138623 .. 4138665 -  -8.3  -2.56715   ACGGCTACGAAGCGA CCCGGCAGATCCGCGACAGC GGAC GCTGGGGCGG-CCTGCCGAT CATCGCGCTGACCGC  52 189
HR116_RS18975 NONE
HR116_RS18970 4134709 .. 4134720 -  -5.8  -4.25104   GGCCTGCGAGGAAAA                CGAC GTGC GTCG                 CGCGCTGGAGGAAAA  69 303
HR116_RS18955 NONE
HR116_RS18950 4133094 .. 4133109 -  -2.4  -3.16742   CCTAACTTTCACCAA              CCCCGC CGAA GCCAGG               TTGTAGAATTTGGAG  43 36
HR116_RS18945 4132909 .. 4132922 -  -9.5  -5.42514   GCAGAAACGAAAAAA               GGGCC CGAA GGCCC                TTTTCTCTTCGACCC 100 63
HR116_RS18875 4121750 .. 4121760 -  -2.4  -3.54902   GGACCGAAGAAGGAA                 GACG CGC CGGC                 TGATGGTGACTATCG  49 35
HR116_RS18870 4121002 .. 4121031 -  -2.1   -3.5518   GGAAGAGCTAGATAA       GGCTACGGGTAACA AAA TGCAACA-GTAGCC       GGCTCAGGTCAGTTC  49 29
HR116_RS18865 NONE
HR116_RS18860 4119203 .. 4119231 - -16.7  -3.53012   CCCGCGCCCGTGAAA        CGCGAAGCCCCCA TGA CGGGGGCTTCGTG        CTTCATACCGTCGAG  89 45
HR116_RS18845 4116780 .. 4116813 -  -8.9    -5.252   GACGGGCATAAAAAA     CCCGCCGACCGG AAACCAGGGAA CCGGT-GGCGGG     TGAAGACGGGATCGG 100 87
HR116_RS18840 4115999 .. 4116023 - -10.6  -3.14463   AACCTGCTGGATGAA          TCGCGCAGGG CCCTT CCCCGCGCGC          CGCGCCGCACTGGCG  64 97
        queF 4115101 .. 4115119 - -17.4  -4.54727   TTGCCGAAATGAAAA             GCCCCGGC ATG GCCGGGGC             TTTTTCGTATCCGCG 100 53
HR116_RS18815 4112293 .. 4112326 - -17.5  -3.53012   TGGCCTGGTTCGAAA     CCCTCGGCATCGACCT GGA AGG-CGCTGCCGAGGG     GCCGGTCGTGCTGCA  89 268
HR116_RS18805 4111309 .. 4111326 - -10.5  -3.89412   ACTGAAACGACGAAA             GGCGACC CAAG GGCCGCC              TTTCCAGGTGTCGCA  76 55
HR116_RS18795 NONE
HR116_RS18790 4108620 .. 4108677 -  -6.2  -3.79906   CGACTGGTACAAGAA GAGCGAGAACCG-CGACTACGCCGGCGCC GAG GATCCCGGCGT-GCAGTCGGT-CTCGCGC ATCTATCGCTACTAC  62 437
HR116_RS18765 4103823 .. 4103834 -    -3  -3.19463   GGCATCACTCAGGAA                GAAT GGTG ATTC                 CGCGTGCCCTGAGAC  44 3
HR116_RS18760 NONE
HR116_RS18755 4101735 .. 4101745 -  -3.2  -2.62396   GATGCGGCTATACCA                 CCTC ATC GAGA                 CCCTCCCGACGCGCC  39 114
HR116_RS18750 4100945 .. 4100960 -  -3.2  -4.25104   TTTCCGCCAGGAAAA              GAGAGG AATT CCTTTC               CGAGATTTCCACAGA  63 515
HR116_RS18735 4097370 .. 4097382 -  -4.7  -3.91897   CCCGGCAGCGACAAA                CCGGC GGT GCTGG                AAACCCTCGGCGTGG  61 166
HR116_RS18700 4090882 .. 4090896 -  -4.2  -4.11216   CCGGCACGGCGAAAA               CTAAGG ATT CCTGAG               CTTCCATCTTGTCCA  63 488
HR116_RS18690 4090134 .. 4090146 -  -4.8  -2.62616   GCATTGCGGAGACCA                GCAG TGCCC CTGC                CAGCCGCCTCACCGA  43 34
HR116_RS18685 4089176 .. 4089215 -  -6.2  -3.28791   ACGGGGTTCCGACAA  CCTTCGGCTCGGCCGCCTC AGC GGGGCGGG-GCGCCAACGG  GACAGGCCGGCAGCT  52 3
HR116_RS18680 4088120 .. 4088137 - -12.7  -3.48276   TCCGCGTCGACAGAA             CGGCACC CCGG GGTGCCG              TTTTTTCCATCCGCT  76 43
HR116_RS18670 4086509 .. 4086528 - -11.4  -5.37593   GCGCAAACGAAAAAA            GGCGACCC TTTC GGATCGCC             TTTCTTGCCCCGCCA 100 58
HR116_RS18665 NONE
HR116_RS18660 4085311 .. 4085332 - -15.9  -4.74103   TGCGCAAGGTAAAAA           GGGCGATCC TCCC GGATCGCCC            TCCTGCATCAGAACA 100 33
HR116_RS18655 4084133 .. 4084147 -  -3.5  -3.85817   AGGCGGTCTTATAAA              GGCAGC GACA GC-GCC               CGTCAACGGCTCAAC  56 498
HR116_RS18645 4083785 .. 4083809 -  -3.4  -3.62597   GGCAGCGGCGAAGAA         CCGGAACGGGC ACTC GCCCGGGC-GG          ATGCCGCGCTGTACG  53 88
HR116_RS18635 4082244 .. 4082261 -  -9.1  -2.67188   CGAGACCAGGACAAT             GCC-GCGC CCC GCGCAGGC             GCCTCGCTCAGATCT  56 33
HR116_RS18630 4081410 .. 4081425 -    -4  -2.94099   CTTCGGGATCAGAGA              TGGAGCG TAC CGCTC-A              TGTACAACGCCGCCT  44 3
HR116_RS18625 4080784 .. 4080827 -  -2.8   -3.1875   GATACCGCAACGCAA GCGGGCAGCCCCTTCGCTCG CCGT CGAGCGGAGGTGACGACAGT GGAACGGCCCCCAAA  44 169
HR116_RS18610 4078518 .. 4078542 -  -5.5  -4.23723   GAAGACGAGGGAAAA          GCGCGAAGCCG GAC CTGCGTCGCTC          AGAACTCCATCGGCA  67 178
HR116_RS18605 4077365 .. 4077412 - -14.1   -2.8507   CGAGCGAAGGAAGTA GCGGCGCTGATCGACGA-GGCC GCCGT GGCCACCGCCCACTAGCGCCGC GCAGGACGCGGCAGC  74 67
HR116_RS18595 4075739 .. 4075755 -  -2.2  -3.53811   CGCAGTCTGCCGAAA              CCGC TCTGTCCCG GCGG              TGACGCAAGAATGAC  49 441
HR116_RS18585 4075469 .. 4075488 -  -4.8  -3.59979   TCCGCCTAGCTGAAA            GCGCTAGG CAGC CCGTGCGC             TCAGCGACGCCTGCC  55 26
HR116_RS18580 4074786 .. 4074796 -  -6.8  -3.16668   CAAGACCCTCACCAA                 GCTG CAG CAGC                 GCCAGGACGAGGCGC  52 262
HR116_RS18565 4072326 .. 4072339 -  -2.3  -5.37043   ACTTCACAGAAAAAA               CGAGA CCCG TCACG                CGAATCGCCGCACAC  84 192
HR116_RS18555 4070860 .. 4070872 -  -4.8  -4.24306   CTGAAGAAAAAAAAT                CCTC AGACG GAGG                CCGCCTCGCCGGCCG  65 15
HR116_RS18550 4070203 .. 4070233 - -16.2  -4.86731   TCTCCGTAAATAAAA       CACCCTGCCAAAGC CTA ACCCTGGCAGGGTG       TGGGGGTGACCATCT 100 81
HR116_RS18545 4069115 .. 4069133 -  -3.1  -4.08767   TTCAGCGTCGCAAAA             CCTGAAA GGGTG TTTCGGG             GTACAGCTGTATCCG  58 46
HR116_RS18530 4067416 .. 4067432 - -10.8  -4.21607   CGCAGGCAACAGAAA              GCCCGC GCTCG GCGGGC              TTTTCGGCAAGGCAA  84 51
HR116_RS18515 4065884 .. 4065922 - -13.1  -3.99481   GGCAGGAAAAGAGAA  GCCCCCGGGACC-ACAGC GGCA ACTAAAGGCCCCGGGGGC   GATGAGGCGGCAGTT  86 102
HR116_RS18510 4065512 .. 4065547 -  -6.3  -3.30159   CGAACTTCCGGACAA   CGACGACCCCGAACTCAA GGC TTGAG--CAGGG-CGTCG   GCCTCGCTGACGCTG  55 4
HR116_RS18500 4064184 .. 4064198 -  -2.1  -2.92111   CGGCGAAAAAACTCA              GCG-TG CCGC CATCGC               CATTTCCATGCCCGG  40 8
HR116_RS18495 4063839 .. 4063874 -  -7.5  -3.71848   TTCGCCGAGGAAGAA   GCGCGGGCGCGCA-AGG CTGG CCAGTG-GCGACCGCGC    GACGCCGCTCCTAGA  63 36
HR116_RS18480 NONE
         map 4061435 .. 4061458 -  -2.2  -4.11484   TCGAACTCGCCAAAA          CGCCTGCCGG ACAC CCGCCAGCCT           CCCTTCGGAAAAGTC  59 69
HR116_RS18470 4061082 .. 4061102 -  -2.5   -3.6106   CGCAACACGGGGAAA            GGTGGCA GCTTTCA TGCCAGC            CACATGGAAAATTAA  49 138
HR116_RS18465 4060631 .. 4060660 - -12.1  -2.62184   TCCCTTCCGACACGA       GCGGGGCCGGTCGA TCC TCGCCCAGCCCC-C       TCGAAGCTTCACTCT  65 94
HR116_RS18450 4058679 .. 4058697 - -11.7  -4.76041   GATACTGACGAAAAA             CGCCGGA GCTGA TCCGGCG             CGAAGCGCCCATGGT 100 89
        thrS NONE
        infC NONE
        rpmI NONE
        rplT 4055326 .. 4055355 - -16.6  -4.61199   ACTCCAGATACAAAA       TAGGGGAAGAGC GGTAAG GCTCTTCCCCTA        TCGGTGACGTTACGT 100 72
        pheS NONE
        pheT NONE
        ihfA NONE
HR116_RS18410 NONE
HR116_RS18405 4051027 .. 4051050 - -11.8  -5.60993   GCGGCCATAAAAAAA          TCCAGTCACC GCTA AGTGACTGGA           TTTTCTAGGGATTTT 100 41
HR116_RS18400 4048371 .. 4048381 -  -6.8  -3.53811   TCGACTCCCTCTAAA                 GCCA TGC TGGC                 CGTTTGGCATTATCG  59 160
HR116_RS18395 NONE
HR116_RS18390 NONE
HR116_RS18385 4042235 .. 4042251 -  -6.5  -3.85817   ATTTCGCCTCAGAAA              TCCCCTC CTG GATGGGA              AGTTTCTACAGTTAA  65 156
HR116_RS18380 4040360 .. 4040370 -  -2.4  -3.53444   GGATTCTCGCCTAAA                 TCGG TGT CCGG                 GATCAGTAGACCACT  47 79
HR116_RS18375 4038741 .. 4038776 -  -6.1  -3.53012   GTCGTCCTGCGCAAA   CCCGCC-ACCCCC-GGC TACG GCCTGGAAGTCGGCGGC    AAGGCCGACAACGGC  56 340
HR116_RS18325 4024662 .. 4024673 -  -2.2  -4.22748   GAGGAAGAAATGAAA                CGACG CGG CG-CG                CTCTACGAAAGAAGC  62 310
HR116_RS18310 4022370 .. 4022385 -  -6.2  -3.27475   GGCCCGACGATAAGA              TTGAAG TCGA CTTCAA               GGTCAACGCTTTTTT  52 99
HR116_RS18305 4021007 .. 4021019 -  -6.9  -3.63991   GATCACCCGCAAGAA                GCCGG CGC CCGAC                GACCACGACGCCTGG  61 103
HR116_RS18290 4017547 .. 4017562 -  -7.5  -2.54896   GGCTGAGCGAACCGA              GCGGG TCGCGG CCCGC               CCTTGGCAGAGCGCG  51 48
HR116_RS18265 4012050 .. 4012079 - -11.5  -2.53263   CGCACTGTGAACGCA       GACGGGTCATTCAG TCA CTGAATG-CCCGGC       CACCTCGCGACCCGC  62 57
HR116_RS18260 4011091 .. 4011124 - -10.9  -3.53012   CCCTTTCCCCGGAAA     GGGCCGACGCACTCAG CGG CTG-GCGCGGCGGCTC     ATGAACGCCAGGCGC  71 4
HR116_RS18255 NONE
HR116_RS18250 NONE
HR116_RS18245 4008233 .. 4008257 - -11.3  -3.14344   GAGGTGGCGGACGAA          CGGCGACGGCG CCA CGCCGACACCA          GCCCCTCCGCCTGAG  67 48
HR116_RS18215 NONE
HR116_RS18210 4000612 .. 4000639 - -11.3  -3.78312   AAACGACGCACGAAA        GCTCCCCCAGA GATTAA TCCGAGGGAGC         CGTTCCGGGGAAATC  76 95
HR116_RS18205 NONE
HR116_RS18200 3998381 .. 3998393 -  -3.3  -2.62184   GCTTGGCTGACAGGA                CGGCA GAC TCCCG                CGGCGGCGCCAGGTT  39 61
HR116_RS18195 3997893 .. 3997930 - -14.2  -3.92075   ACCGCGATCGAGAAA  CGCCGCTACGC-CCAGGC CCTG GCCCGGCGCG-AGCAGCG   CAAGCTGATGGAACT  84 117
HR116_RS18180 3994827 .. 3994858 -    -5  -3.03159   TCAATCTGCTGAACA      GCC-TCGGCGACGCG CTG CTCAGCGCCAACGGC      GACGACGTCGAACTT  45 492
HR116_RS18150 3986142 .. 3986167 -  -3.2  -4.07568   CCTTCCTTGGGAAAA         GCCGC-GACAG GACAT CTGCCCGCCGC         TCAACAGTTGATATC  58 26
HR116_RS18145 NONE
HR116_RS18140 3981847 .. 3981876 - -14.3  -3.34652   TTGGCAAAGAAGACA       GGCAGTTCGCCAGG TTA CCAGGCGAAC-GCC       GCCAGCAGCGCCTGC  82 126
HR116_RS18135 3980833 .. 3980863 - -11.1  -2.75712   GCAGCCAGCGAAGGA       CTCGGCCTCTAGC GGCCG GCTAGCCGCCGAG       CAAGGCGCAGAAACG  63 14
HR116_RS18115 3976039 .. 3976051 -  -7.7  -3.41988   TCTGATTCAAGAAGA                GCCTT CAG AAGGC                CGGAGCAAGCCGGCA  60 490
HR116_RS18110 NONE
HR116_RS18105 NONE
HR116_RS18100 3972217 .. 3972234 -  -4.8   -3.6502   TACCCGGCATTCAAA             GCACCA TGTCGT TGGCGC              TGGTAATCGCCAGTA  55 3
        gspG NONE
HR116_RS18090 NONE
HR116_RS18085 NONE
HR116_RS18080 NONE
HR116_RS18075 3969090 .. 3969103 -  -3.7  -4.07568   CCCGCGCGGCGAAAA               GGCGC CAGG GCGGC                AAGCTTCAACGCCAG  61 186
HR116_RS18070 NONE
HR116_RS18065 3967511 .. 3967567 - -14.5  -2.61681   CGCGAATGCGACAAT GGCGGGCCGGGGAGCCGAAT-CGC-AGG CGTC CCGAGCGGATTCGGTTTCCCGGCC-GCC TGGCGGCAACTCGCT  74 108
HR116_RS18060 3966568 .. 3966598 -  -4.9  -4.08706   CTTCCAGTAGATAAA      GACTTATCCTTTGCC GCG GACA-AGGA-AAGTC      CGTAAAGCCACTATA  63 517
        hmpA 3962976 .. 3963000 - -17.1  -4.56597   CCTTTTTCCGAAAAA          GGGCCGACGCA CCT CGCGCCGGCCC          GTCGCTTCAGGCGTC 100 32
HR116_RS18035 NONE
HR116_RS18030 3961340 .. 3961356 -  -2.2  -3.79906   CCACCTGCAGAAGAA              GCTCGA CTACC TGGAGC              GCAAGGATCTGGTCG  54 184
HR116_RS18010 NONE
HR116_RS18005 NONE
HR116_RS18000 NONE
HR116_RS17995 3956386 .. 3956406 -  -4.7  -2.87229   AGCGCAGGAGGAAAT            CTTGCCG GGACTGT CGGCAAA            TGGTGAAGAACTGTT  46 39
HR116_RS17990 3955774 .. 3955784 -  -8.2  -3.15861   GAGCAGGTGGATGAA                 GCGG TGG CCGC                 GCTGCAACGGATCGG  56 262
HR116_RS17980 3952204 .. 3952231 - -11.3  -5.45652   ACGCCCAATAAAAAA        CGGGATTCCCG TTTCAT CGGCAATCCCG         TCGGAAGCTTAAGCG 100 82
HR116_RS17975 3950359 .. 3950410 - -12.2  -3.91084   GCAGTGGGAAGCAAA GCATTAGTCAGCCGGCGGACGTGGA TCG TTCACGACTGCCGGCCGACTC-CGC CGAATAATGACAGGA  81 104
HR116_RS17970 3949233 .. 3949250 - -14.1  -3.89354   GCCTGAAACGAACAA             GCCCCGC ATTC GCGGGGC              GCGTCTGCCACGGGC  86 46
         icd 3914551 .. 3914568 - -12.7  -4.98531   TGCGGAAATGAAAAA             GGCCGGT GCGA ACCGGCC              TTTTTCTCGTTCGGG 100 53
        clpS NONE
        clpA 3911308 .. 3911337 - -22.3  -4.13767   TCGCCGATTGCAAAA       GAAAACGCCCGGC ATCT GCCGGGCGTTTTC        GTTGCCGCGCTCGGA 100 41
HR116_RS17785 3905862 .. 3905879 -  -4.7  -2.70932   TGTCGGGTTCAATCA             CGAACCG GCGC CGGCGCG              ATGACTTCGCGGGAG  44 1
        lolA NONE
HR116_RS17775 NONE
        serS NONE
        cobA 3900630 .. 3900641 -  -3.6  -3.61398   TCCTGCGGTCAACAA                CGGC GTGT ACCG                 TGCTGGCTTCGCCAC  51 451
HR116_RS17725 3896600 .. 3896616 - -15.1   -4.4267   CCCGAAAATGCAAAA              GCCCCGC TCA GCGGGGC              TTTTCAGTACGCGGA 100 43
HR116_RS17710 3893221 .. 3893258 -  -7.8  -4.27316   CCTCTGAAGCGAAAA  GGGGCTCGCAG-GGGAAT GTTG ATCCCGACTGC-AGCCCC   TTCTCATTCACGCTC  76 72
HR116_RS17705 NONE
HR116_RS17700 NONE
HR116_RS17695 NONE
HR116_RS17690 NONE
HR116_RS17685 NONE
HR116_RS17680 3886674 .. 3886686 -  -4.9  -4.04764   AAAACAATCGATAAA                TAACT TAT AGTTA                TCAATTAATGCCCGG  63 48
HR116_RS17675 3885557 .. 3885569 -  -4.7  -4.55798   CACTGGAAAGCAAAA                GGGGC GCC GCACC                ACGCTGCCACGTCGA  74 70
HR116_RS17670 3884329 .. 3884347 -    -8  -3.03124   GTGCAGGGTTCAATA             GCCAGGCC CGA GGTCCGGC             GCGAGCGAATGCCCG  54 71
HR116_RS17655 3880873 .. 3880883 -  -8.2  -3.05463   ACTCCCTCGATTCAA                 GCCG GTT CGGC                 ATTGAGCTGCATGAC  57 11
HR116_RS17650 3879509 .. 3879521 -  -4.7   -3.4072   TATTGCCCATCAGAA                CGCCG GTT CTGCG                GTCGGCACCTGCATG  53 7
HR116_RS17645 NONE
HR116_RS17640 3866919 .. 3866936 - -10.5  -3.72241   CATGAAGGATGGAAA             GGGCGAC GCGC GCCGCCC              CGCTGTCTATACGGC  74 32
HR116_RS17635 NONE
HR116_RS17630 NONE
HR116_RS17625 NONE
HR116_RS17620 3861325 .. 3861339 -  -6.4  -3.14132   CCTTGCCGCGATCAA               CTACCA TTT CGGTAG               CCGCGACGCCTTGTA  51 513
HR116_RS17610 NONE
HR116_RS17605 NONE
HR116_RS17600 NONE
HR116_RS17595 3855992 .. 3856006 -  -5.6  -3.26531   GTATGAAGATGAATA               GCGTGC ATG GCATGC               CCCATCAGACGAGTC  52 30
HR116_RS17590 NONE
HR116_RS17585 3853784 .. 3853842 -  -3.3  -2.66435   AGGCCGAGCAGATCA GCTATGGGCTGGCCTGAGCGAG-CAT-CGAG GAC CACGGATGGCACGCTCAGGCC-GCCC---GC ACCATGGTATAGGTC  39 13
HR116_RS17570 NONE
HR116_RS17565 3848192 .. 3848203 -  -7.2  -3.28712   CCTGGCCCTCTAGAA                GCGG TATG CCGC                 GCGTAGGTAGTAGAA  58 8
HR116_RS17560 3846578 .. 3846594 -  -7.2  -3.03159   GCAAGGCCTTCAACA              CCCGCG TCACC CGCGAG              ATGGGCGGCTACCGC  51 392
HR116_RS17550 3844019 .. 3844051 -  -5.4   -4.7373   GGATCGCAGCAAAAA     CCGGCGAATCTGTGG AGAG CC-CAGCGACGCCGG      GCCTGGTAAAGCGCA  78 125
        uvrY NONE
        uvrC NONE
        pgsA NONE
HR116_RS17530 3840536 .. 3840553 - -12.7   -4.4078   TCGCTGGAATGAAAA             GAGGGGC CGAA GCCCCTC              TTTTCAACGACTTAC 100 72
HR116_RS17525 3838026 .. 3838044 -  -5.9  -3.28712   CCGCTTGGTCGACAA             GGCGAAG CTCAC CATCGCC             GATCTCCAGGACTAT  53 412
HR116_RS17515 3837162 .. 3837186 -    -7  -2.78384   CTCGGCTTCACCACA          GCCGCCAGAC TTGCG GTCAGCCGGC          GCGCCGATGTCGTTG  48 183
HR116_RS17490 NONE
HR116_RS17485 3830301 .. 3830315 -  -2.1  -3.53811   GTCACCCGGTCGAAA               CGAAA GTTAA CTTCG               GCCGGGGCATCGCTC  49 39
HR116_RS17480 NONE
HR116_RS17475 3828433 .. 3828458 -  -6.7  -3.54158   CACTGGAACAACGAA         CGGCAGCAGGCC CAC GGCGAGC-GCCG         GTGGCACATGCAGAT  59 517
HR116_RS17420 3821182 .. 3821199 -  -7.7  -3.59583   AGAATGAGTCTCAAA             TGGCCAT CCAA ACGGCCA              TTTATGCCTTGATTT  62 79
HR116_RS17355 NONE
HR116_RS17350 NONE
HR116_RS17345 3808585 .. 3808598 -  -3.1  -3.67597   GGTGGGATTGAACAA               TGCCT TTGG AGACA                TGCTTCTGATGTTCA  53 225
HR116_RS17120 3771225 .. 3771241 -    -5  -3.29511   TGCACCGGCGGATAA              GCGTGC GCGCG GCTCGC              TCCACCGATTTGGCT  50 39
HR116_RS17085 NONE
HR116_RS17080 3763728 .. 3763746 -  -8.1  -3.14132   TCTGGCGGGTAGGAA            GCGGCCGC GCAA GCG-CCGC             TTTGGGCACAGATCG  58 214
HR116_RS17070 3760086 .. 3760104 -  -8.1  -3.14132   TCTGGCGGGTAGGAA            GCGGCCGC GCAA GCG-CCGC             TTTGGGCACAGATCG  58 214
HR116_RS17065 3758467 .. 3758498 -  -8.8  -3.80893   ACGGGACAAGGGAAA      TGAGCGGTATCTTGC CAG ACAGGATACCGC-CA      TTCACGAGGTTTCGA  69 85
      tet(G) 3756175 .. 3756204 -  -9.2  -3.72695   ATCCGCTCGACGAAA       TGGCGTCCGGCC TCGGTC AGCCGAACGCCG        CGCGCATGACGCTCG  71 267
HR116_RS17040 3754818 .. 3754866 -  -6.8  -3.14132   TGCTCCCCGCAGCAA CCGCCCGTGATCGCGGCT-TCGAC AAG GTCAAGACCCGCAATC-CGAACGA GGCGGCCGAGATGAC  53 455
HR116_RS16965 NONE
HR116_RS16960 3736219 .. 3736244 - -13.3  -2.53263   GCGACCGGCAACCGA         GAGGCGCGTCAG GAT CCGACGCGCC-C         TGCCCCGGTAATCAG  67 37
HR116_RS16955 3735858 .. 3735884 - -18.8  -5.69793   ACAGGAAAGAAAAAA         GCCCCGTAACTC ACT GAGCTACGGGGC         TTTCCTGTTGGAGGC 100 33
HR116_RS16945 3733347 .. 3733368 -    -3  -4.36914   TCGTGGCCGAGAAAA           GCC-CGGAT AGCGG ATCCGTGAC           CATTAGGCCTCGTCC  64 104
        kynA 3731761 .. 3731785 -  -3.3  -4.18018   GTTCGCCACGGAAAA          GGAGCTGGTGC AAT GGGCCGGCCCC          GCCCTGCGGCATCCG  63 495
HR116_RS16925 3730140 .. 3730159 - -12.1   -4.3739   GATCGCCGTAGAAAA            GCCCCGC CTCGTC GCGGGGC             TTTTTCTTTCCCCCG  91 45
HR116_RS16915 3727946 .. 3727972 -  -2.2  -2.90901   ATATCGCTAAGGATA         GTCAACCCCA GGCAAGG CGGGATTGCC         CGAACGAAGAGCTAT  40 72
HR116_RS16910 3726241 .. 3726268 - -10.6  -3.09933   TTCGAAGCGATCGAA        GGCGCACGCTACA CAC TGTT-CGTGCGCC        TCCCGGAGTCGACGA  62 56
HR116_RS16900 3723220 .. 3723230 -  -5.4  -2.53112   AGCCAAGCCATGAAG                 CCAA GTC TTGG                 ATGTTCGTAAGCCGT  43 250
HR116_RS16895 3721782 .. 3721799 -  -5.5  -3.01924   GAGGCGCTGGTAATA             GAGAAGG ACTT CCTGCTC              AACTTTGAACTCCTG  47 378
HR116_RS16810 3706390 .. 3706411 -  -4.3  -4.00348   TCGCAAGGAAGGAAA           CCTGACGAT GGAT ATCGGCCGG            CGCTCACGGGCCAAG  61 65
HR116_RS16785 3697349 .. 3697360 -  -2.2  -3.33151   GGGCTCAAATCAATA                CCGA TAGT TCAG                 CGTCACCATCACATT  45 8
HR116_RS16780 NONE
HR116_RS16775 3696365 .. 3696386 -   -13  -3.74693   GGTTAGGGCAGCAAA           TCGCCGCG ACACTG CGCGGCGA            CAGAGTTTCATGGGA  81 63
HR116_RS16725 3688008 .. 3688031 -  -8.8  -3.28712   CCCGCCGGTTCACAA          CAAGGACGCA CTGG CGCGACCTTG           TTCAACCCGAAAGGA  60 412
HR116_RS16715 3683719 .. 3683750 - -11.4  -3.38314   CGTAAGGCGGAAACA      GGGTGTGGCGGCGC TTGC GCGCCGCCGGATCC       TCGGGCTACGCCAGT  69 156
HR116_RS16695 3678107 .. 3678120 -  -9.5  -3.72576   CCTGCTCTGACGAAA               GGGGC TTCG GCCCC                TTTTTTGCTGCGTGC  71 158
HR116_RS16685 NONE
HR116_RS16680 NONE
HR116_RS16675 NONE
HR116_RS16670 3674025 .. 3674038 -  -2.3  -3.62046   CGATGGCTTCAAGAA               TCCCG GCCC CGGTA                TTCAGGTGCTTACTC  49 68
HR116_RS16665 NONE
HR116_RS16660 NONE
HR116_RS16655 3670333 .. 3670366 -  -4.5  -4.19953   CACCGAATCCGAAAA     GAGCGAGCAGAAGGGC TTT GCCAATCTGCT-GATC     GGCCTATTCGGGGCC  66 198
HR116_RS16630 3666613 .. 3666628 -  -8.2  -5.47218   TTGTATTTAAAAAAA              GAGCCC ATTC GGGCCC               TTTTTTTTCCGAGAC 100 47
HR116_RS16625 3665953 .. 3665985 -  -2.7  -2.79796   GGGCACCCTAGCACA     TCCCGCGCCGCT CGCCTTCTTC AGCGG-GCGGCA      GACCGTCCGTTGCAC  39 74
HR116_RS16620 3664994 .. 3665020 -  -7.2  -3.12999   GCATCGGACATGGAA         GACAGCAGCTTC CTG GAAGAGGCCGTC         AGACTCGCCAAAACC  52 513
HR116_RS16610 3662974 .. 3662987 -  -3.7  -3.07816   CGGCCATTGAGCGAA               GCGCC ACTC GGCGG                GCAGGCATGGGCTGG  45 258
HR116_RS16600 3660518 .. 3660546 - -17.5  -3.09635   ACTTCCATGAGGTAA        GGCGGACAACCGC AAC GCGATTATCCGCC        GCTCCAACGGGGGGT  88 91
HR116_RS16590 3658105 .. 3658146 -  -4.4  -3.61398   CGTCTGCGCGAAGAA GCCGACGCCGC--TCGC-CAG AAG CTGCGCGAAAGCGGCTACAGC GGCGCCGAGTACGAC  52 202
HR116_RS16580 3656904 .. 3656924 -  -3.1  -4.06864   TCCAGACAAGAACAA            GCCGGAGTG AAC CACACCACC            ACTGCCTGTTTCGTG  58 258
HR116_RS16565 NONE
HR116_RS16560 3653044 .. 3653058 -  -2.7  -2.87211   ACCGTTCGCGACATA               CGGCG GATGA CGCTG               CGCGGGCATTCACCC  40 40
HR116_RS16555 NONE
HR116_RS16550 NONE
HR116_RS16545 NONE
HR116_RS16540 3647941 .. 3647955 -    -7  -3.78934   CGCGCGCGAGAACAA               GGCGGC GCA GCCGGC               GTGAGCGCCTGCCAA  62 146
HR116_RS16530 3645586 .. 3645603 - -14.1   -4.8622   CCCCGGAATGAAAAA             GGCCCGC ATCC GCGGGCC              TTTCCCGTATACCAC 100 46
HR116_RS16505 3641254 .. 3641273 - -12.2  -4.42238   TCAGCCCAAGGAAAA            GGCTCATC CCCG GATGAGCC             TTCAGGCGATCGCTA 100 97
HR116_RS16495 3639415 .. 3639433 -  -4.5  -2.80612   GGGAACCGGAACAAT             CCTTGAG TCAGT CTCATGG             CGCGGATGCTACGCA  42 157
HR116_RS16490 NONE
HR116_RS16485 NONE
HR116_RS16480 NONE
HR116_RS16475 3631374 .. 3631420 -  -2.1  -2.65442   ACAGCAGCCAGAGCA CCGCCCGCT-TCAGTACC-CCCG GCT CGCGCGGCGCCATCAGCGGGCGA CCTTCTGCGCCAGCG  38 15
HR116_RS16470 NONE
HR116_RS16465 NONE
HR116_RS16460 NONE
HR116_RS16455 3627980 .. 3628021 - -12.9  -4.09243   TACACGGCGGGAAAA CGACGA-CGGGGCGGCCGCC ATC GGCAACCGCCCCGCTCCCCT CGGCGCCAGGCGAAC  86 42
HR116_RS16445 3625655 .. 3625669 -  -5.6  -3.33696   TCTTGTTCGAATGAA               TGCGGC CTG GCGGCA               GCGGGCATCCGGAAC  52 138
HR116_RS16440 3624170 .. 3624193 -   -21  -3.36878   TCTAGTCAGTGAGAA          GCCGCCGGCC CTGT GGCCGGCGGC           GGAAGCATTCGGGGC  95 109
         tpx 3623627 .. 3623668 -    -8  -3.16564   CGGTCATGGGACGAA GCGGGTTGGCCGTGG-GGCTC AGA GAGCCGCCAGGGCCG-CC-GC GTAGTTCGGCTCGTC  56 2
        muxA NONE
        muxB 3614737 .. 3614759 -  -4.7  -3.14132   CGGGCGGCGGATGAA           GGGCGTGGA CAGAC TCATCGCCC           GGCGTCCCCGTCGAA  48 17
        muxC NONE
        opmB NONE
HR116_RS16395 3609298 .. 3609311 -  -5.9  -3.31144   GGTGCAGGTGGACAA               CCCGG CGAT CCAGG                CCCAGTTCGGCTGCG  53 498
HR116_RS16380 NONE
HR116_RS16375 NONE
HR116_RS16370 3601159 .. 3601186 - -18.4  -4.86621   ACGGCCAACGAAAAA        GGGCCGCCAGGG TTTC CCCTGCCGGCCC         GCTTGCGCGCCCGCT 100 41
HR116_RS16365 NONE
        benA NONE
        benB NONE
HR116_RS16350 NONE
HR116_RS16345 3596221 .. 3596253 -  -6.8  -3.67141   AGAAGTTCACCGAAA      GCGGCGACTGAAGC GCTCA GCCGAGGTCGCCGC      CAGCTACCGGCAGGG  59 9
HR116_RS16325 3591589 .. 3591607 -  -3.7  -3.05463   AGCGTGCTCAGCGAA             GAGCCGC TGGTC GCCGCCC             TGCCCGCCGGGCACA  44 408
HR116_RS16315 NONE
        catC NONE
        catA 3588482 .. 3588510 - -16.8  -3.61398   CGCCTGGCGGAAGAA       GGCGGCATGGTCG CCAG CGACCA-GCCGCC        CTCCCCGTTTCCCAC  91 42
HR116_RS16295 3586367 .. 3586420 -  -7.4  -3.84825   CCTACCCAGAGGAAA GTAGCAGCGCCGCCGCG-CAG-CCGCC AGC AACGGGCTGTCGCAG-AGCGCCGCCCC GGATGGGGCGGCGGC  68 47
HR116_RS16290 3585350 .. 3585366 -  -9.3  -3.01712   CCTCGCCCTGCAATA              CGGCGAC GCC GACGCCG              CGCGGATCATGGCGC  60 232
HR116_RS16280 NONE
HR116_RS16275 3582385 .. 3582395 -  -6.8  -2.82516   GGCTTCATCATCACA                 GGCA TCG TGCC                 CTACCTGACCGGCTG  50 217
HR116_RS16255 3579205 .. 3579215 -  -8.2  -2.88249   CATAGCCCGGAGACA                 GCGC TCA GCGC                 TCGCCCTGCAACCCT  55 19
HR116_RS16250 3578193 .. 3578207 -   -10  -3.18264   CTGGCCAGCTACGAA               CAGCAG GTG CTGCTG               GCCCTGGAAGAATCT  62 453
        mexS 3570186 .. 3570205 - -12.1  -4.72272   CGCGCCCACGAAAAA            GCCCGGC TCGATG GCCGGGC             TCTTTCGCTGCGGGT 100 46
HR116_RS16205 3567497 .. 3567524 -  -2.6  -4.33819   ACCAGCGAGAAGAAA        TGAGCCCAAGGA GGCA TCCATGCTCTCA         GCCCGCTCCCGCAAG  65 237
HR116_RS16195 NONE
HR116_RS16190 3565382 .. 3565396 -  -3.5  -2.61144   CTATCGCCGAAAGAC               CCTAC CGCAC GCAGG               TCTACATCATTTTCC  39 55
HR116_RS16185 NONE
HR116_RS16180 3563700 .. 3563710 -  -8.2  -3.29511   GGCATCGGCGGATAA                 CGCC GTT GGCG                 TTATCCGCCCTACCC  60 101
HR116_RS16165 3559678 .. 3559693 -  -2.4  -4.65895   GGCCCCAGGGAAAAA              CTCAGC ATCA GCCGCG               CTCCCGGGTCGCCTG  68 17
HR116_RS16160 NONE
        dsbG 3558052 .. 3558075 - -10.9  -2.95298   CGCAGGGAGTATAGA          TGGCCGGCG GCTCGG CGCCGGCCC           GGAGGATCAGCGCGG  64 32
HR116_RS16150 3556378 .. 3556407 -  -3.6  -3.61398   GTTGCCGGGCAAGAA      TCG-CGACC--CGGC GCC GCCGTTGGCCGACGA      CTACCTGCAACCGGG  51 293
HR116_RS16120 3550766 .. 3550776 -  -6.8  -3.63627   GGCGGACATGGGAAA                 GTCG GGG CGAC                 ACATGAATGATAATG  59 97
HR116_RS16115 NONE
HR116_RS16110 3549180 .. 3549194 -  -5.8  -4.53475   AGCCGACAAAAATAA               TGAAAA TAA TTTTCA               GTGCGTTTCGCTCCG  76 77
HR116_RS16105 3546541 .. 3546570 -  -6.3  -2.75064   GGCTCCAGGTAACCA       GGGTAC-GGCCGGC GAC GCCGGCGAATGCCC       GGCGCGTACGTCGCG  49 95
HR116_RS16100 3545367 .. 3545383 -  -7.2  -3.28119   AGGCAGCCAGACTAA              CAGCCG TCTAG CGGCCG              TTCCAGTGGCGCGCC  58 16
HR116_RS16095 3544764 .. 3544781 - -14.1  -4.06419   GCCCGGCAGAAAGAA             GCCCCGC CAAT GCGGGGC              TGCTTTGACGCAGAC  90 47
HR116_RS16090 3543802 .. 3543821 -   -10  -4.05788   TGCTCGCAAAGGAAA            CCCCAACT CATA AGCTGGGG             TTTTTGCTTGTAACT  78 13
HR116_RS16085 3542538 .. 3542550 -  -4.8  -4.68994   ATGAGCAGTGAAAAA                GAGC TTGAT GCTC                TGGCTTTAAGAATTG  75 407
HR116_RS16040 NONE
HR116_RS16035 3531036 .. 3531052 -  -5.1  -3.86015   GACGCTCGCCATAAA              GCCGT CGATTGT ACGGC              CTGGCGCCGCCCAGC  60 55
HR116_RS16030 3529127 .. 3529166 -  -3.5  -3.14132   CTCCCTGCTGAGCAA GGGC-GCGACCA-TCGCCG GGGC CAGCGACTGGCCGGTGTCC  AGCCTGTCGCCGTGG  45 324
HR116_RS16020 3526476 .. 3526492 -  -5.8  -2.77899   TGCCCGTAGCAAGCA             GGGTGCC AAGC GGC-CCC              GACCCTGTCGCCACG  46 196
        gcvH NONE
        gcvP 3523093 .. 3523126 - -16.7  -3.54424   GGGTATCGCCGGAAA     CGCG-AGGACGCCGCC GCT GGCGGCGCCCTCCTCG     TCCGTCACTCCTCGC  91 30
HR116_RS16005 NONE
HR116_RS16000 3520287 .. 3520304 -  -9.8  -4.49132   GGAAAGAGAAAAGAA             GCGCCG GCGCAG CGGCGC              GGTTCAGCATTCGAT  95 29
        gcvT 3518661 .. 3518713 - -15.4  -2.76815   ACCCGCCGCAACAAT CCCGGCGACCAGGCGGTGGC-GCGC GCCC GCGCCGCCCTCGCCCGCTCGCTGGA CCGCAAGGCGCCGCC  75 405
HR116_RS15980 NONE
HR116_RS15975 NONE
HR116_RS15970 NONE
HR116_RS15965 NONE
        cadA NONE
HR116_RS15955 3509155 .. 3509182 - -14.2  -3.15999   CCGCGACAGACGCAA        GGCGGATAACCG CAAG CGGTTATCCGTC         CTACCTCAATGCGAC  80 117
HR116_RS15940 3505268 .. 3505281 -  -5.2  -2.62983   CCGATCTCGACATCA               GCGG GCATGT CCGC                CCTCCTCTTCTGGTT  43 9
HR116_RS15935 NONE
HR116_RS15930 3504023 .. 3504070 -  -3.3  -3.61517   ATCGTCCGCGAACAA CCCTGAGCCATGACCGGCACAG ACTGA CCGGTTCGGCC-TGACTCAAGG CCGCACGGCAGTCCC  51 20
        ppk2 3502588 .. 3502624 -  -5.2  -3.07935   ACCCGAGTGAGCGAA   GTACGCGG-CGCCTACTG GCT CAGTAGACTTCCG-GCAC   GATGATCTCGCCGGG  47 8
HR116_RS15915 3501346 .. 3501366 - -14.7  -3.58726   GTCGCTGAGACACAA            GGGCAGGCA TTG CGCCTGCCC            GTTCTTCTGTTGGCG  85 77
        pvdG 3499348 .. 3499362 -  -3.4  -3.53811   GTGAGTCTCCGGAAA               CAGTCG TCG CGGCCG               CCCCTCAACTGGCGG  51 30
        pvdL 3486187 .. 3486223 - -20.3  -3.81089   CACATATATGAAGAA    TGGCCGGAAGGGAGTAT GGA ACATTCCCTTCCGGCCA    TTTTCATCGCCCCCC 100 67
HR116_RS15825 3464738 .. 3464754 -  -3.5  -2.75992   GGCCATCGAAGATCA              CCTCTGG CAC CCGGCGG              GCTACTACGCCGACT  41 493
HR116_RS15815 NONE
HR116_RS15810 NONE
HR116_RS15805 3459882 .. 3459892 -  -2.4  -4.48987   GTTGGATAACGAAAA                 GCCC GGC GGGA                 AAATTAGCCGGCCAG  65 29
HR116_RS15800 3459576 .. 3459606 -   -11  -3.36505   ATACGGCAGGCAGAA       CAGCCGTACGGGCG TAC CGCCCACTCAGCCG       GCCGCCTTGTCCATG  69 19
HR116_RS15795 3458757 .. 3458781 - -22.9   -4.8622   CCTCGTAACGAAAAA          GGCCGGGGAGC GAT GCTCCCCGGCC          TTTTTTTCGTCGACA 100 79
HR116_RS15750 NONE
HR116_RS15745 3424840 .. 3424862 -  -4.8  -3.53012   GCGGGGCCGGCCAAA           GCTTCGTC ATGAATA GACGAGGC           TGCCGTGGATTTCTT  53 9
HR116_RS15740 3423785 .. 3423806 - -17.3  -5.52384   CCTTCATGAAAAAAA           CCCGCCAGG AGAA CCTGGCGGG            TTTTTTCATGGCGAA 100 51
HR116_RS15725 3418311 .. 3418338 - -22.8   -4.2461   AGGCGGACGAAGAAA        GGCCGGAGCGAC GCGG GTCGCTCCGGCC         TTTGCGCATCCGCGA 100 51
        pvdP 3412847 .. 3412877 - -14.6  -3.53012   GGTCTCGCGCGGAAA       GACTGAGGCCCGCG TTG CGCGGGCCTCCTCC       ATCCTTACTCGCTCT  83 49
HR116_RS15680 3406524 .. 3406535 -  -5.8  -3.14211   ACCGCGCTGGATCAA                CTGG ACTC CCAG                 GCTTGCATGCGCAGG  51 10
HR116_RS15675 3405005 .. 3405054 - -13.6  -4.44548   GACATGCAACGAAAA CGCCCTGCG-TGCCGGGCATCCCC TGGC GGGGAAACG-GGCAACACAGGGCG TGGCGGCGTGGCGCC 100 43
HR116_RS15670 NONE
HR116_RS15665 NONE
HR116_RS15660 3401163 .. 3401201 -  -2.9  -2.77895   CGCAGGCGGAATAAT   TGTCGGCATCGGCGGAA GGAAA TTCCGCCGTTTCAGTCG   TCCGCCGCCGGAAGG  40 19
HR116_RS15655 3399728 .. 3399740 -  -9.1  -3.01712   CCCGGCCGCGCAACA                GGCCT GCC AGGCC                TGCATTTCCCGATTG  57 232
HR116_RS15645 3398976 .. 3399004 - -11.9  -3.23274   CCTGGCAGAACTGAA        CGTATCGTTGAAT GGA ATTCAACGATACC        CAAGCCGGGCGGGAA  70 123
HR116_RS15640 NONE
HR116_RS15635 3395996 .. 3396044 - -14.6  -3.28924   GACTTCCGCGTAGAA CCTGATCCGTCGCCTGCGCTCGC GCGA ACTCACGCAGGCGACG-ACCAGG ACGAAGGACCTAGGC  82 35
HR116_RS15620 3392465 .. 3392475 -  -8.2  -2.83715   TCGACGAGCACGACA                 GGCC GCA GGCC                 AGCCTCGGCTACCGG  54 468
HR116_RS15560 NONE
        tssK NONE
HR116_RS15550 3377348 .. 3377378 - -10.4  -2.66692   CACCAGGAGGAGAAC       CAGCATGAACAGCG TCG CGCCGCTCATGGCG       CCTGCTCCGCATCGG  59 18
HR116_RS15545 NONE
        tssA NONE
HR116_RS15535 3371111 .. 3371121 -  -2.4  -3.53012   GGCGCGGCCGGGAAA                 GCGG CTA CCGG                 GAGCGAGCGACACAG  47 171
HR116_RS15530 3370730 .. 3370740 -  -6.8  -3.07816   CTGTCAGCCACGCAA                 CAGC GCT GCTG                 TCCGACTGTTGCCCG  51 50
        msuE NONE
        ssuD NONE
HR116_RS15515 NONE
HR116_RS15510 3366425 .. 3366442 -    -4  -3.54129   CAGACGCTCCGCAAA             GCGCCG AGTCTA CTGCGC              CCGGCTGGGTTTGGG  53 132
HR116_RS15505 3364971 .. 3364987 -  -4.3  -3.16055   GAAACCCTGGATGAA              CCGCATG ACC CACGCGC              GCGGGCTGTTCATCC  47 261
HR116_RS15465 3355345 .. 3355366 -  -4.4  -3.16564   TGCGCACCTGATCAA           GGCCAG CGAGGAAGAC CTGGCC            CTGCTCTACCCCGGC  47 419
HR116_RS15410 3341339 .. 3341356 -  -4.9  -3.04517   ACGGCTCGCGAAAAG             GAAACGA CGCT TCATTTC              GCGGTCCGCCGCGTC  47 88
HR116_RS15405 3339660 .. 3339684 -  -9.9  -3.28712   CCGTGCCTTCCACAA          GGCCACCGG ACAGCAG CCGGGGGCC          TATCGCAAGGCCAGC  66 47
HR116_RS15395 NONE
HR116_RS15390 NONE
HR116_RS15385 NONE
HR116_RS15380 NONE
HR116_RS15375 3334220 .. 3334246 -  -9.3  -3.04144   CCCGTAGGGCGAATA         GCGCCCCGGCG CTATC CGCCAGCGCAC         CGGTACCTCGTCCTA  60 38
HR116_RS15370 3331977 .. 3332014 -  -9.7  -3.06796   GCCGACGCCATCGAA   GCGGCGCTCGCCGCCCCC GAC GAGGAGAGCGTG-GCCGC   CGCCTCGATCGCCGT  57 320
HR116_RS15335 3324232 .. 3324278 - -18.9  -2.71924   TATCCGCCGTGAAAC CCGGCGTAACGGCGGATAGCGCC TGC GGCGCTATTCGCC-CTAC-CCGG CAAGCCGTTACGCCC  87 99
HR116_RS15315 NONE
HR116_RS15310 3318614 .. 3318628 - -11.4  -2.70932   TGTTCGGCGCAATGA               CAGCGG ATT CCGCTG               CATGGCGGAGGAACG  63 160
HR116_RS15305 3317914 .. 3317940 - -22.3    -4.258   CCATGGACGAAGAAA         GGCCCGCCCGG TCATC CCGGGCGGGCC         TTTTCCATCCGGCGA 100 45
HR116_RS15290 3315892 .. 3315930 -  -7.3  -4.07568   CGCTCCTGGCGAAAA  GGGGGAAGCG-CGTGCCG TCGT CAGAACGGCGCGTCGCCC   TGGATGGTGGTGCGG  70 7
HR116_RS15285 NONE
HR116_RS15280 NONE
HR116_RS15275 NONE
HR116_RS15270 3312326 .. 3312347 -  -2.2  -4.67353   GCACCGAGCGAAAAA           CTCTTCAC GAAATG GCGACGAG            TTACGAGCTAATACA  68 61
HR116_RS15265 NONE
HR116_RS15260 3307415 .. 3307441 -  -6.5  -2.70932   CGGCGCGCTGAACGA        GGCGCTCATGCG GCAC CTC-CGAGCGCC         AGGCGCGAAGGTGTC  49 4
HR116_RS15255 NONE
HR116_RS15250 3299959 .. 3300010 - -20.1  -3.24597   AACCTCGAATGAAGA CGGACGGCACCGGCCCCTGCCGCC AGGCG GGCGGCAGGGGCCGGCGGT-TCAG GTTGCCAGGTTCGCC  95 22
HR116_RS15245 3299232 .. 3299251 -    -7  -3.14132   GGGCTGTCCGACGAA            CCGCGCCG TGGC CGCCGCGA             ACGCTTAGAAAAAAC  53 171
HR116_RS15240 3297693 .. 3297719 - -19.4  -3.53012   CTCTCGCCGGCCAAA         GGACCGGCCCGC AGC GCGGACCGGCCC         GCCCCCTCAGCGCAG  95 32
HR116_RS15235 NONE
HR116_RS15230 NONE
HR116_RS15225 NONE
HR116_RS15220 3293200 .. 3293218 -  -8.1  -3.04144   GGCGGACTCCGAAGA            CGC-CCGC CTCA GCGGAGCG             CCAGCGCCTGCTGGC  57 15
HR116_RS15215 NONE
HR116_RS15210 NONE
HR116_RS15205 NONE
HR116_RS15200 3290020 .. 3290036 -    -8  -3.29144   CTACTTCCTCGATAA              CCTTGC AAGAA GCAAGG              GTTTATGAAGAGGAC  58 284
HR116_RS15195 3288551 .. 3288563 -  -9.1  -4.15044   GCGGCGCTGAAGAAA                TGGCC GCT GGCCA                TGACCGAATCGCGGT  79 57
HR116_RS15190 3285929 .. 3285974 - -23.4  -3.09933   TCGCAAGGTATCGAA GGGGCTTTGCCAAGGGCGGG AACGCG CCTCCCCTTGGCAAAGCCCC TTCCGGGCCGAAGCC 100 81
HR116_RS15185 3283764 .. 3283776 -  -2.6  -3.63515   GGGTAGCGCGAACAA                GCGC ATCCG GCAC                TTCAGAACTGGTATT  49 27
HR116_RS15180 3283248 .. 3283267 -  -2.8   -4.4017   TGAACGGCCAGAAAA            TG-GAGCTG GAG CCGCTCGCA            CGACTGATCTACCGG  66 128
HR116_RS15145 3276773 .. 3276793 -  -3.9  -3.91911   CGGAGCGCAAGGAAA            GCGCCGA GCAGCTT TCCGCGC            GGGTCGACCAGCGTT  58 61
HR116_RS15115 3271302 .. 3271316 -  -2.8  -3.48276   CGGCCCTCGACACAA               GTCACC CGG AGTAAC               CCGCCATGCTCATCC  49 433
        soxR 3270379 .. 3270424 - -10.4  -3.34233   CGACAACCCGCAGAA CCAGGTGCGCCAGGCGAT GGACCCGCAG ATCGCACGGCGCATCCGG GCGATGCTGCAAACC  63 375
HR116_RS15085 3266132 .. 3266187 -    -8  -2.52896   CCACTGCCGAAGGCA TTCGTCGAGGCGTGCCGGACGCAG-CG CCG CGACCGCCCCCGGCGCGGCCCGACACC TTATTACGCAGTGAT  50 320
HR116_RS15070 3264329 .. 3264347 - -10.2  -2.75064   GCGCCTACGCAAGGA             CACCGGCG CGG CGGCGGTG             GGCGACATTCCGCCG  57 143
HR116_RS15025 3253611 .. 3253666 -  -9.7  -3.63515   CCGTAGGGCGAATAA CCGCTCGCGGTTATCCGCCGCCTA TCCGTGACG TCGGCGGCGGATAACGCCG-GTGG CGTTATTCGCCCTAT  68 63
HR116_RS14990 3245706 .. 3245730 - -21.5  -2.62396   CACCGGCGCACATTA          CCCCCTTGCCC GTC GGGCAAGGGGG          CTTTTTTCGTGGCCG 100 90
HR116_RS14965 3239872 .. 3239929 - -11.6  -3.14132   GCTGGCTTTCATGAA GGCCTCCATCTGCGTAACGTTACGCAAT CAGA ATAGCGTAACGTTACGTAGATGGA--CA GGGTCTATGCTTAGA  70 36
HR116_RS14960 3239271 .. 3239305 -  -2.7  -3.29471   CTCCCACGACATCAA    CGAGTACCTGCGCCGG CATA CCGGCG-AGGATTTCA     GCGCCAAGGACTACC  46 295
HR116_RS14865 3216011 .. 3216026 -  -5.4   -3.6806   ATAGATCTAGCCAAA              GCTACGC CGG GCG-AGC              GTGAGAATCTCACGA  58 396
HR116_RS14860 NONE
HR116_RS14855 3214768 .. 3214781 -  -2.4  -2.92668   CATCACGTAATTACA               TCGA AGGCAA TCGA                GTAGGCGGTCTCAGC  40 100
HR116_RS14850 3214532 .. 3214546 -  -2.8  -4.82154   AACTCACATCAAAAA               TACCCA CGA TGAGCA               GATCTAGTCGGTTGA  75 29
HR116_RS14840 3213292 .. 3213311 -  -2.1  -3.53012   TCGCCCTTCCGGAAA            GCCATAC GTACGT GTATCGC             CTACGGTCTATGGCT  47 250
HR116_RS14835 NONE
HR116_RS14830 3209477 .. 3209496 -  -5.6  -3.29385   AAACGGAATGAGCAA            GCCAGGTG CCAC CACCCTGC             CCTTAGACCTTCGTC  52 177
HR116_RS14825 NONE
HR116_RS14820 NONE
HR116_RS14815 NONE
HR116_RS14810 NONE
HR116_RS14805 3202883 .. 3202893 -  -3.2  -5.02201   AAAACATCATAAAAA                 CGAA AAT TCCG                 ATGCCATTCCTAACT  78 182
HR116_RS14800 3199273 .. 3199294 -  -7.1  -3.18582   TAGGTCACTGATCAA           GCCGGGCTG ATTC CGGCTCGGC            TTGATACGGTTTAAC  53 395
HR116_RS14760 NONE
HR116_RS14755 3190528 .. 3190541 -  -3.7  -3.25823   TTTTCCGCACACTAA               GCGGC CTAC GTCGC                GAGCGCATGGTCAAC  48 154
HR116_RS14750 3189507 .. 3189522 -  -3.2  -2.89602   CTCCTGAGAGGAAAT              GGGC GGGCTTTG GCCC               CATGGGGAGCCAACG  42 118
HR116_RS14745 3189151 .. 3189170 -  -6.4  -4.31293   TTAGAGATCAATAAA            CGC-TCACC TTT GGCGAAGCG            ATCAACGTAGATGGA  73 194
HR116_RS14720 3182048 .. 3182079 -  -8.6  -3.68351   CCCTGACGACGCAAA      GGCTGATG-GGCCGC CTG GCGGGCGCACCCGCC      GTTGCCACCATCGAC  65 369
HR116_RS14710 3179857 .. 3179870 -  -8.1  -2.78018   AGTTTCCAGGAAGCA               CCGTC GGCT GACGG                CCTTTCGCTGACGGC  51 195
HR116_RS14670 3168753 .. 3168782 - -13.6  -2.74192   GAGGCCCGAAGAGCA       GGGGCACGGCGA ACCGTG TCACCATGCCCC        TCTCTAGAGATGCGC  72 52
HR116_RS14665 NONE
HR116_RS14660 3166010 .. 3166034 -  -8.5  -4.59773   CCCGAGGTGTAAAAA          GAGGGGCGG CACCCAC CCGCCCCTG          AAGGGATGCTCCGTA  86 41
HR116_RS14655 NONE
HR116_RS14650 3163259 .. 3163279 -  -6.7  -3.05463   ATTCTCGCCATTGAA            GGGCAGGCT CGA AGCCGGCCT            TGTGGTTGTTGTCAG  51 64
HR116_RS14645 NONE
HR116_RS14640 3160469 .. 3160504 -  -3.8  -3.04144   GGCTGATGTCCAACA    GGTCTCCGGCCTGCGC TTCA ACACAGGCCGAAGGGT     GACCCTGGCAGCTAT  45 37
HR116_RS14635 3159496 .. 3159523 -  -7.6  -3.34222   ACGAGGACCTTAGAA        GCGCAGCGCAGTC ACT GTCC-CGCCGCGC        TTGCGGTGTCGCATT  58 9
HR116_RS14595 3149679 .. 3149693 -  -2.8   -3.9712   GGATTGCAGGAGAAA               CAGC TGGCCGT GCTG               CACCGGTACGTGCAG  58 220
HR116_RS14535 NONE
HR116_RS14530 NONE
HR116_RS14525 3132144 .. 3132184 -  -6.7  -4.31433   CAGGGTGACAAGAAA  TCCACCCCGCCGCCAGA CGCAGGC TCAGGCGGCATGCCGGA  GACTCCGCCGGCCAC  73 9
HR116_RS14520 NONE
HR116_RS14515 3130513 .. 3130531 -  -5.2  -5.72053   CAAGGAAATAAAAAA             CGATAGCG TAA CGCCATTG             TCCGCAGGGCTTCCG 100 89
HR116_RS14510 3129440 .. 3129463 - -13.9  -4.93365   GGGTAGAACGAAAAA          CGCGCCTCA GCGAAG TGAGGCGCG           CGGGTCGTGCGGGCG 100 52
HR116_RS14505 3128679 .. 3128696 -  -3.4  -2.62184   GGTTGTCCGAGATGA             CCGAGA AATCCA TCTCAG              GCACCTCCCTGGCGG  39 22
HR116_RS14500 3127842 .. 3127861 -  -3.4   -3.8062   CAAGGCGCAGAAGAA            GACCCGCC GCCT GACCGGCC             CCTACGCCTGGGGCT  56 178
HR116_RS14450 3118496 .. 3118548 -    -6  -2.70932   CTTGCTGGTCAACGA GGGCGAGCGCCTGACCGG-CGTGGTC ACC GACCGCGACCTGGC-GGTGCGCGGCC TCGCCGATGGACTCG  47 230
        exoY 3116988 .. 3117002 -  -3.4  -3.53091   ATGCCGCCGGGGAAA               GCGGGC TTT GCCAAC               GACCTTCGCGCATCA  49 38
HR116_RS14420 NONE
HR116_RS14415 3111849 .. 3111898 -  -3.4  -2.84999   ACGAAATCCAGCACA TGCGCGGCTGGCAGTGTTTCGCCCG CAC CGTGCG---CGCCGCCAGCCGGGCC GAGGCGGAACGCCTG  41 165
HR116_RS14405 3110744 .. 3110756 -  -5.5  -3.61398   GCTGGTGTTGAACAA                CACCG CGG CGATG                CTGGAGGACCTCGGT  54 323
HR116_RS14395 NONE
HR116_RS14390 3107629 .. 3107650 -  -3.6  -5.83226   AACGCAAGAAAAAAA           TCCACTCC GTCCCT GGAGCGGG            ATTAGCCTGAATCAG 100 293
HR116_RS14385 3107143 .. 3107174 -  -6.4  -3.27994   CGAATTGCACAGCAA      GGCGGAAACCCTCA GCCG CGAGGAGGCCCGCC       GCCACTTGGAGGCAC  53 176
        glgA NONE
        treZ NONE
        malQ NONE
HR116_RS14325 NONE
HR116_RS14320 NONE
        glgX NONE
HR116_RS14310 3090281 .. 3090296 -  -4.6  -4.15044   GCCGGGTGGAAGAAA              GGCTCA GTAG TGGGCC               TGGGCGACGCCCTGC  65 13
HR116_RS14305 NONE
HR116_RS14300 NONE
HR116_RS14295 NONE
        clsB NONE
HR116_RS14285 3084956 .. 3084974 -  -6.7  -3.01791   ACGTGCTGCTCAATA            GCG-ACGC CCAG GCGTTCGC             CGGTTCCGGCGCAGG  51 151
HR116_RS14240 3072029 .. 3072039 -  -4.6  -3.14132   CCGCGGCTGGAGGAA                 GCCC TGG AGGC                 GATCCGCAGCGGGCT  47 285
HR116_RS14225 3068913 .. 3068951 -  -8.7  -3.30124   CTTCAGCGCCGAGAA  GGTCGCCCACTTCGGCGC GGAT ACGCCGATG-GGCCGGCC   CGGCCAGCCGGAAGA  58 157
HR116_RS14190 NONE
HR116_RS14185 3062512 .. 3062523 -  -5.8  -3.06796   GCCGACCGCAGCGAA                CACC CGAA GGTG                 GCGGCCGGCGCGGTG  47 423
HR116_RS14140 NONE
HR116_RS14135 NONE
HR116_RS14130 3050776 .. 3050833 -  -5.4  -3.40403   CTTCGTCGAGTACAA GCACATCAGCCTGACCACCGGCGC-GGC CTGA GCCTGGGCGAGCGGTGCGGCCGACG-GC GCCGCCCGCTACTCC  53 34
HR116_RS14105 NONE
HR116_RS14100 3043740 .. 3043765 - -10.4  -2.70932   TTCGCTGCGGAACTA         CCCAAGCCCC TTCGCT GTGGCTTGGG          TCGACGCTGAACGCG  60 142
HR116_RS14095 3042358 .. 3042373 - -11.8  -2.52464   TCCCCCGCGAAGCGA              CGGCGC AAGG GCGCCG               CCGACGCCATGGGTG  65 103
HR116_RS14090 3041957 .. 3041974 -  -8.4  -4.74103   CCCGGAATGCAAAAA             GCCCAC TCGATG GTGGGC              TCTATGCAATGGGGC  88 137
HR116_RS14080 3039274 .. 3039289 -  -6.1  -3.01712   GTTCTCCTTCGAACA              GGCGT TGCTCG ACGCC               GGCATCGGCCTGCGC  49 406
HR116_RS14065 NONE
HR116_RS14060 NONE
HR116_RS14055 NONE
HR116_RS14050 NONE
HR116_RS14045 3032620 .. 3032640 -  -3.1  -5.40072   CGCCGTTCAAAAAAA            CCGCCTATG CGT CCCAGGCCG            CCAGCAGGCGTCGAT  91 9
HR116_RS14040 3032067 .. 3032096 -   -12  -2.50816   GCGGCACTGAGCAAG       GCGGTCGCGGCG CTCAGT CGGCGCGGCCGC        TACGCAACTGGTCGG  65 9
HR116_RS14030 3029590 .. 3029617 -  -2.6  -4.35091   AAGATGGAGAAGAAA        TCAGCGCGCACCC GTA GGGTG-GTACTGG        TACTGGGTTGAGCGA  62 128
HR116_RS13995 3022464 .. 3022483 -  -4.2  -2.79183   TGGACGCCGAGGATA            TCGCCGAGG CGG CCT-GGCGG            CACGCGCACAGCCGG  41 369
HR116_RS13975 3018258 .. 3018276 -  -6.6  -3.71848   GCCTTCGAGGAATAA             GCCCGGAG CGG CTCAGGAC             ATCGCGTCGAGTCGT  62 19
HR116_RS13970 3016737 .. 3016788 - -15.1  -3.14881   GAACGCGCGGAGCAA GGCGCGACCGCTGCTCGACGGCGCC CAGC GACGCC-TGGAGCTGCGG-CGCGGC GCGATGCGCCTGGAA  76 513
        kynB NONE
        kynU 3000545 .. 3000563 - -11.6  -3.01712   GCCGCCCCGGGAATA             CCGGCGCG GTC CGCGCGGG             CGGGACTCAGGTCAC  68 32
HR116_RS13890 2998955 .. 2998985 - -12.6  -2.71712   GCCCGGTCCGGAAAG      GGCGCGC-CGGTCG GGCTT CG-CCGTGCGCGCC      AGGTTCGCAGGGCGG  68 48
HR116_RS13885 NONE
HR116_RS13880 2994637 .. 2994659 -  -4.1  -2.70932   CGTGCGGCCGAACGA           CCTGAGC ATTCTCCTG GCCCAGG           TCGCCAGCGGCGACG  41 271
HR116_RS13870 NONE
HR116_RS13865 2991358 .. 2991386 -   -16   -4.8622   TGGGCGAATGAAAAA       GGGCGCGG-GCCA GTAT CGGCGCCGCGCCC        TTTTGCCGGAGGAGA 100 44
HR116_RS13845 2983114 .. 2983148 - -10.8  -3.65046   CCGGGAGCCCAACAA     CCTGCCAGATCTGG TCGCCTG CGAAATCTGGCAGG     GCTACCGGATCTGGT  73 98
HR116_RS13840 NONE
HR116_RS13835 NONE
HR116_RS13830 NONE
HR116_RS13825 2978794 .. 2978806 -  -3.3   -2.9155   GTGGGGAAGATTACA                GTGCT GTC AGCTC                AGCGCGGCGGGTTCA  42 24
HR116_RS13820 NONE
HR116_RS13815 2975311 .. 2975323 -  -5.5  -3.28712   CTGGTTCGGCGAGAA                GGACC GCA AGTCC                GACGTGTTGCAGGTG  51 516
HR116_RS13770 2961376 .. 2961409 - -10.1  -3.01712   GCTGGGGGCGGAACA     CCCGGCGGCGGAC-GC GCC GCTGGCCGCCGCAGCG     CTGGCGGAGTTGCCG  60 368
HR116_RS13760 NONE
        cynS 2959577 .. 2959587 -  -2.4  -3.30124   CGCGACGCTTCAGAA                 CGGC TTG GTCG                 GCAGGTACTTGCCGT  45 9
HR116_RS13740 2955701 .. 2955739 -   -10  -2.71712   CGGCCGTTCTGAAAC   CGGGCGGGCGGATGATGC GGC GCGGCGTCCGCCCGTCCC   CCTTGTTCTGGCCTC  60 41
        cmrA NONE
HR116_RS13725 NONE
        yidD NONE
HR116_RS13715 2949710 .. 2949745 -  -3.8  -3.63515   GGTGACCGGCAAGAA    GCACC-AGCTGCGCGTG CAC CTCGCGGCACTCGGCGC    GGGTATCCAGAACGA  54 353
HR116_RS13690 NONE
HR116_RS13685 2942238 .. 2942253 -  -7.6  -3.36991   CAGGAGTGGGAAATA              CAGAGT TACT ACTCTG               CCTGTGGTGAGACAA  59 480
HR116_RS13670 2937838 .. 2937865 -  -5.4  -3.07994   GCCAACCTGATGGAA        GCCCGGGACGCC TTCG AACGTCCGGTGC         AGGCCGAGGCCTGCC  49 227
HR116_RS13650 NONE
HR116_RS13645 2934187 .. 2934215 -  -5.9  -4.56358   CACAGGCATATAAAA        GAAGGAGGGGC TCAAACT GCCTCCCCTCC        CGAGCATGCGTTCTT  76 40
HR116_RS13630 2932804 .. 2932827 - -13.1  -2.53382   ATGACGCCGAATGGA          CAGGGCGGC CGCCGC GCCGCCCCG           AGGGGCTCAGACGAC  67 32
HR116_RS13625 2931641 .. 2931664 - -18.2  -3.33696   CCGCGTCTGAACGAA          GAAGCCGGCC CCTG GGCCGGCTTC           TTTCATTTTCGCGCT  93 40
HR116_RS13615 2929546 .. 2929572 - -20.8  -3.71848   GTTCCCGATGAAGAA         CGCCGCGTCCCC GAT GGGGGCGCGGCG         TTTTTCGTATGGGGC 100 155
HR116_RS13600 2926485 .. 2926500 -  -8.2  -4.26903   GGTACCCGACGAAAA              CGCCAG GGTG CCGGCG               CTGGATATCCTCCTG  76 421
        mexX 2924860 .. 2924917 -  -3.9  -3.06492   TCACCCAGGCGAAGA CCGGCCGGTCAATGAAGAAACGAGCCA TTCG TAGCGTTCTCCGTCACTGGCCCGCCGG CGAGGCGGCCAGCGG  45 11
        mexY NONE
HR116_RS13580 2921146 .. 2921161 -  -2.4  -4.07568   CGTGGCCCGGGAAAA              GGCGCC GGTG GGCATC               ATCGAGGTAAACGGC  58 396
HR116_RS13570 NONE
HR116_RS13565 2918730 .. 2918755 -  -7.5  -3.19192   GTCGATGCAATGGAA         TGCCCTCTCCC TGGC GGAAAAGGGCC          GGGAAGAGCGAGGCT  56 41
HR116_RS13560 2917055 .. 2917065 -  -8.2  -3.05343   GTCACATGCGGAACA                 CGCC GAA GGCG                 GTCGGCTCGATGGGG  57 1
HR116_RS13555 NONE
HR116_RS13550 NONE
HR116_RS13545 2912984 .. 2913029 -  -9.6  -3.13403   GCTGCGCGAGGAAGA GTTGGCCGGGCGCGCCGACCA TCCGC TGGCCGACCCGGC-GGCCTAC GCGGTGCTGCTGGAG  59 339
HR116_RS13535 NONE
        fahA NONE
        maiA NONE
HR116_RS13520 NONE
HR116_RS13515 2905988 .. 2906009 -  -5.8  -3.53224   CAGGGCCGTCGGAAA           GGCACGTT GCGATA ACCGTGCC            AGGCCCCAGAATCGC  55 140
HR116_RS13510 2904476 .. 2904492 -  -4.3  -2.79312   AAAGGGCGGATCAGA              CCAGGCC GGT GGCGTAG              AACAGCCCGATGACG  42 4
HR116_RS13505 2903552 .. 2903591 - -14.4  -2.90496   CGCGCCGGGAAACGA  GGTATCGGCGGATAACGCC TGT GGCGTTATCCGCCC-TACG  CAATGGGGCGGGCGA  77 101
HR116_RS13480 NONE
HR116_RS13475 NONE
HR116_RS13470 NONE
HR116_RS13465 NONE
HR116_RS13460 2894733 .. 2894769 -    -5  -2.54371   AAGCAGGCTAACGGA   TTCGCCGGGCTATCGGCG ACG CGCGG-T-GCCCGGCGCT   AGCGCGTTCAGAGAC  43 33
HR116_RS13455 2893357 .. 2893372 -  -3.2  -3.61398   GCCGCTGCTCAACAA              GCCG CTGAAGCC CGGC               AAGCTGCGCGCGGCC  49 100
HR116_RS13400 2880851 .. 2880875 - -18.5  -2.72511   CGCAGGCGGGGAAAG          CCGCGCCTCGC AGG GCGCGGCGCGG          GGATCAGCGGCTGGC  86 29
HR116_RS13395 2879783 .. 2879793 -  -8.2  -3.16564   CGGCTACGTGACCAA                 GCGC GCG GCGC                 CGACGGTGCTGCTGG  56 410
HR116_RS13375 NONE
HR116_RS13370 2876439 .. 2876466 - -11.3  -3.14132   GGTCGCCGCGATCAA       CGCCCGGC-GCGG CTCG CCGCTGCCGG-CG        CTGATGATCACCGCC  67 168
        brnQ 2865235 .. 2865257 - -11.3  -3.63569   TGAACGCGGGAAGAA          GCG-CTGCCG GCGG CGGCAGGCGC           CAGCCGGGCCGTGGG  73 121
HR116_RS13335 2864836 .. 2864852 - -15.1  -3.82084   CCCGAATACGAAGAA              GCCCCGC ATC GCGGGGC              TTTCTCTTGGCCGTT  90 51
HR116_RS13320 2863108 .. 2863119 -  -2.2  -3.53091   ACCTCCGCCTCGAAA                CGTCC CCC GG-CG                AACTGCTGGAGCAGG  48 360
HR116_RS13305 2860511 .. 2860528 - -14.1   -4.8622   TGCCGGAATGAAAAA             GCCCCGC GGAT GCGGGGC              TTTCGCGTTGCGCGA 100 48
HR116_RS13290 2858158 .. 2858183 -  -7.6  -3.29144   CTACTGGCGGGACAA        GCGCAG-CGCCG CACG CGGCGACTG-GC         GTACCCCGGAGGTCC  56 242
HR116_RS13275 NONE
HR116_RS13270 2855294 .. 2855320 -  -8.6  -2.87931   TTCAGCGCCGAGACA         GCTTTCCGCGGC GCC GTCGCGAAACGC         TCTGCGCCAAGGGCC  55 85
HR116_RS13265 NONE
HR116_RS13260 NONE
HR116_RS13255 2852909 .. 2852932 - -18.2  -4.07568   GTGTCGGGTGGAAAA          GGGTTCCGGC TGGC GCCGGAACCC           CTGGGCCAGGATCAG 100 37
HR116_RS13250 NONE
HR116_RS13245 NONE
HR116_RS13240 2849690 .. 2849726 - -18.2  -3.53091   AGCGCCTGCGCGAAA   TGGGCGCCGGCAGGGTGA TCG TCACCCT-C-GGCGCCCA   GGGCGCCCTGCTGGT  90 409
HR116_RS13200 2839954 .. 2839981 -   -17   -3.3514   ATTGATAGGTGAGAA        CATCTCCCCGCC GCAG GGCGGGGCGATG         CGGATCATTCCGGGT  91 30
HR116_RS13195 NONE
HR116_RS13190 2835830 .. 2835853 -  -4.6  -3.17194   ACTCGGGCAAGCGAA          CGCTCCATGCA ACG TG-ATGGAGAG          GGCATACCTATGACT  48 341
HR116_RS13185 NONE
HR116_RS13180 NONE
HR116_RS13175 2832979 .. 2832997 -  -3.1  -4.20783   ACTTGATGCAATAAA             GTCGC ATCAATTCA GCGAC             GGGCTACCGCCCGGA  61 159
HR116_RS13140 NONE
HR116_RS13135 2824964 .. 2824996 -  -6.2  -3.01791   ACTGCGGCCTGAAGA     CCCGCGCCTGGC-CGG AAA CCGAGGCA-GCGCTGG     TGAACATGGTCGCCG  49 140
HR116_RS13100 2812567 .. 2812579 -  -6.3  -4.09685   TTTGATTTTGCAAAA                CAACA ATA TGTTG                TGGATTCTGGCGGGC  67 129
HR116_RS13095 2810487 .. 2810507 -  -3.1  -3.56704   GGTGGATGAAAGGAA            CGACAGGCG ACT CAACCGCCG            CAGCCGCCGCAACAG  51 16
HR116_RS13090 NONE
HR116_RS13085 2809453 .. 2809473 -  -3.8  -3.16742   CTGAATCTGGAGCAA            GGGTGGCG AGCGG CGCCGTCC            GCGACAATTGGACGC  47 165
HR116_RS13080 NONE
HR116_RS13075 NONE
HR116_RS13070 NONE
HR116_RS13065 2804583 .. 2804595 - -10.5  -3.32844   CGTTCGAGCCTAGAA                GCGCG GGC CGCGC                CGCTCCAGCGGCGGG  66 201
HR116_RS13060 2802867 .. 2802906 -  -3.4  -2.78679   GGGCGGCATCGAAAG  CCATGCGTTCGTTCCCTG GCGG CTTGGAAAGACGGCATGG   TAGAGCGTATGATAT  40 96
HR116_RS13055 2802164 .. 2802181 -  -3.3  -3.31263   AGGGCATGCCTACAA             GTCCCCCG GAT CGGCGG-C             GCAGCGCCTCAGGCG  46 34
HR116_RS13050 NONE
HR116_RS13045 NONE
HR116_RS13040 NONE
HR116_RS13035 NONE
HR116_RS13030 NONE
HR116_RS13025 NONE
HR116_RS13020 NONE
HR116_RS13015 2792972 .. 2792982 -  -8.2  -3.63515   CCGTAGGGCGAATAA                 CGCC ACC GGCG                 TTATCCGCCGCTGCG  65 260
HR116_RS12970 NONE
HR116_RS12965 NONE
HR116_RS12960 NONE
HR116_RS12955 2780597 .. 2780609 -  -3.3  -3.03124   GCCGACGGGTCAATA                GACCC GCC GGTTC                CGGTCCGCATGGCGA  43 7
HR116_RS12950 NONE
HR116_RS12945 NONE
HR116_RS12940 2776971 .. 2777001 -  -9.6  -2.78715   AAGGCTCCGAGTATA       CGGGCCGATCCC GCCGACG GGGAGCGGCTCG       AGCGGGGGCGCCGGC  57 40
HR116_RS12935 2776275 .. 2776299 -  -5.6  -3.62046   GCAGCGCCTGAACAA          GGCGCTCG GCCAGTAAT CGCGCGCC          TCGCTCAGGGTACGC  57 30
HR116_RS12925 NONE
HR116_RS12920 2772503 .. 2772539 -  -6.4  -4.25056   GAGGGCAGCAAGAAA   CGCTAC-GCCGGCCTGG TGCG CCGCGCCGACGGTGGCG    AGGAGATGGTCTTCA  70 502
HR116_RS12905 2768920 .. 2768944 -  -3.5  -3.53012   TGCTCTTCGGCGAAA         GCCCG-AGCC CGTTGC GGCTGCTGGC          GGTGGGGCTGATCGT  51 491
HR116_RS12890 NONE
HR116_RS12885 2765589 .. 2765603 -  -3.4  -3.64703   CCGGGCGGAGGCAAA               TCGGCG CGA CACCGG               GGGGACCCGTATGGT  51 109
HR116_RS12880 2764912 .. 2764933 -  -2.9  -3.55444   CCGCTACCGGTGAAA           CGAGCCT GCAAGCCT AGGCGCG            GCGGTGCTGAAGGTC  51 67
HR116_RS12875 2763888 .. 2763902 -    -7  -3.37245   GGAGGCGAAGATCAA               GCCGCG CGA CGTGGC               CTTCCTGGTTCCCGG  56 431
HR116_RS12850 2749863 .. 2749894 -  -7.2  -3.07307   GAAAGGCTCATGGAA      GGTCCGGCTGACGG TGGT CGGTCAACCTAACC       ACTGTCCGCCGGCGT  54 50
HR116_RS12845 2749010 .. 2749037 -  -8.2   -3.0264   AAACGGCGCTGAACA        GCTGGCGCGTCG CTGC CGCCGCGCCCGG         CGCCAGGCTGACCGC  57 55
HR116_RS12800 2738267 .. 2738301 -  -5.6  -2.64803   CTACGCGGAAATTGA    TCCG-GCGCAAGTCG CTCAGC CGGCCAGCGCGCGGA     AACGCCGACGCGGCG  46 6
        modA NONE
        modB NONE
        modC 2735543 .. 2735553 -  -2.4  -3.35679   GCTGCCGATCTACAA                 CGGC TTC GCCT                 TCCTGCGGCGGATGG  46 97
HR116_RS12775 NONE
HR116_RS12770 NONE
HR116_RS12765 2731829 .. 2731844 -  -4.6  -3.77219   ATTATTGAATTGAAA              CGGAGG AGGA CTTCCG               GGGCAGGGCGCACAA  58 109
        ccoN NONE
HR116_RS12755 2729847 .. 2729864 - -14.1  -4.50159   TCGAAGCGAAAGAAA             GGGGCCG TTGC CGGCCCC              GTAAGGCACTTTCGT 100 76
HR116_RS12750 2728644 .. 2728655 -  -5.8  -2.78384   TGGTCCGCGAGGACA                GCGA CTGG TCGC                 AGCGCTGGGACTACG  46 36
HR116_RS12740 2727220 .. 2727235 - -11.8  -5.40004   GAGGAAACGAAAAAA              GGCGCC CGTG GGCGCC               TTTCGTCGTATGGAA 100 45
HR116_RS12730 NONE
HR116_RS12725 NONE
HR116_RS12720 2723268 .. 2723295 - -14.2  -2.90496   CGTTTCCGTAAAGCA        GAAGAGGCGACC GCAA GGTCGCCTTTTC         GTTGCCGGCGTTTCA  77 38
HR116_RS12705 2719357 .. 2719371 -    -7  -3.28924   TATGCGTGTCGATAA               GGGGCG CTC CGGCCC               GGATCATTTCTTTGC  55 29
        tse1 2718641 .. 2718658 -    -4   -4.4522   GAAAAGCATAACAAA             GGCAGG GGCTTT CCGGCC              GGGGGTGGTCGGACC  69 236
        metH NONE
HR116_RS12690 2714173 .. 2714207 - -10.6  -2.74012   CGACGAGCGCAAGGA     GGCCGACCTGCCGGGC ATC GCCGAACAGATCGGCG     AAAGCCGCCTGTCGT  60 331
HR116_RS12675 NONE
HR116_RS12670 2712106 .. 2712134 -    -8  -4.34771   CAAAACCCAGGAAAA        CCGCGACAGCGT GGTCG ACGCCCGCGCGG        CCTTCGTCCTGATCC  76 109
HR116_RS12665 NONE
HR116_RS12660 2709631 .. 2709648 - -14.1   -4.8622   CTCGGGAATGAAAAA             GCCCCGC GGCT GCGGGGC              TTTTCCGTCAGGGCG 100 45
HR116_RS12650 2708407 .. 2708465 - -27.5  -2.50074   GCTTCGAGAATAGAG CTGGCCGCCAGGGCGCCTCCAGCCG-GCC GAA AGCACGGCCGG-GGCGCCTTGGCGGTCAG GCCTGGCTGACGTAC 100 22
HR116_RS12645 2707400 .. 2707410 -  -6.8   -3.3344   ATGGAAGCTCGACAA                 CCTC GAA GAGG                 TGGCGCGCGAGATCG  54 107
HR116_RS12630 NONE
HR116_RS12625 2704059 .. 2704080 -  -9.4  -5.86061   CCGGACGAAAAAAAA           CCGGAGCC GCGAGG GACTCCGG            TTTTCCTTCTGGCAT 100 55
HR116_RS12620 NONE
HR116_RS12615 2701950 .. 2701969 - -13.6  -4.55128   ATCCTGAAATGAAAA            GAGGGAGC CCTG GCTCCCTC             TTCGCGCGTTCGCCG 100 46
HR116_RS12605 2699965 .. 2699975 -  -8.2  -2.70932   GTTCGCGGTGAACTA                 CGGC GTC GCCG                 GGCTGCTTGCCGAGC  52 81
HR116_RS12595 2698220 .. 2698250 -  -5.2  -2.62184   CGGGGGTCTACAGTA       CCCTGGCCGGCTTC GTC GAGGCCGGCGAGTC       GGTGGAGCAGTGCGT  44 285
        nhaB 2693072 .. 2693100 -  -5.7  -3.96068   CCAGCTCAACAAGAA        CGGCGCGCCGGCC CAC GGCCTGCTGGCCT        CGGGGCTGCTGGTGA  63 365
HR116_RS12560 2688770 .. 2688803 -  -8.1  -3.71848   CGGCTTCATCAACAA     CGAGTTCGCCCTGCTG GGC CAGCAGGACCG-CTCG     GACGTGACCGAGTAC  63 461
        gloB 2686285 .. 2686302 -  -5.5  -3.89524   AGCCGATTCTAGAAA             TGACCTC AAGA GTGGTCA              AGATTTCGCCAACCT  62 41
HR116_RS12535 2684583 .. 2684610 - -18.4  -4.07568   CCGCGCTTGCGAAAA        CGCCACGCCGGC AGGA GCGGGCGTGGCG         TTTCGGGACGGCCTG 100 51
HR116_RS12530 NONE
HR116_RS12525 NONE
HR116_RS12520 NONE
HR116_RS12515 NONE
HR116_RS12510 NONE
HR116_RS12505 2676190 .. 2676208 - -14.6  -4.72272   TCCTCCCATGAAAAA             TGGCCGCT CGA AGCGGCCA             TTTTTCATGGGCGGG 100 45
HR116_RS12465 NONE
HR116_RS12460 2665333 .. 2665368 -  -8.3  -3.54424   GTGCATGGCGCGAAA    CATGGAATACCTGGC GGAAAG GCGAGGTGTCCCATG     CTAGGGCGGGCCTGG  65 97
HR116_RS12455 2663188 .. 2663200 -  -4.7  -3.79747   CCATCGACGACGAAA                TCGCC AGC GGCGT                GATCCGTTGCCAATG  58 328
        folD 2661147 .. 2661176 - -20.9  -3.92075   ACCCGCAGCGATAAA       TGAAAAGCCCCGC GTTC GCGGGGCTTTTCA        TTACCGGCGACCTCA 100 38
HR116_RS12410 NONE
        lpxH 2656670 .. 2656680 -  -6.8  -4.58395   TGGACGGCGGAAAAA                 TGCG AAT CGCA                 TAATGTTTCGCTGAA  78 67
HR116_RS12400 2655225 .. 2655240 - -11.8  -4.56978   GCCGGAAACAAGAAA              GCGCCC CGCG GGGCGC               TTTTTTTTGCTGCCT 100 44
HR116_RS12390 2653517 .. 2653532 - -11.8  -4.65895   GTCTCCAGCGAAAAA              GCCGCC CTTG GGCGGC               GTTTTCGTCCGACCA 100 45
        acnB 2649999 .. 2650017 - -13.1  -5.06414   GCCGGGCAAGAAAAA             GCCCCGC ACGGG GCGGGGC             TTGTTCGACGCGTCG 100 46
HR116_RS12375 NONE
HR116_RS12370 2647989 .. 2648011 -  -4.6  -2.82516   GGGCGCACGAGCATA           GCCGCGCCGC TCT GCGCCGGGGG           CCAGCAGGGTGGCTG  44 71
HR116_RS12365 2646894 .. 2646950 - -21.1  -3.53224   GACGCTGGGGCGAAA CGACGAAGACGCCACG-GGCCTCTGCC GGGAA GG-AGAGGCCGCGCGACGTCTTTGTCG GGGATGGGTAACCGC 100 207
HR116_RS12360 NONE
HR116_RS12355 2643669 .. 2643696 - -19.2  -5.63517   GGCGCAAACAAAAAA        GGCGTCCCGCTG TTGC CAGCAGGACGCC         TTTGTCCAGGTCCCG 100 226
HR116_RS12350 NONE
        nirD 2640803 .. 2640815 - -10.5   -2.6927   ATCGGCGAGAGATCA                GGCGC ACA GCGCC                ACGCTGTCCAGGCCG  60 10
HR116_RS12340 NONE
        cobA 2637253 .. 2637268 - -11.8   -4.8622   GCCTCTAAGGAAAAA              CCCGGC TCAG GCCGGG               TTTTTCTTTGCCTGG 100 55
HR116_RS12290 2627826 .. 2627868 -  -5.3  -4.18018   GTCCGTGACGGAAAA CCCTGCGTCATCGACCTGC GCTCG GCAGGCCGGGCATGCCGGG CGCCCCGCCAGGCGC  65 207
HR116_RS12285 NONE
HR116_RS12280 NONE
HR116_RS12275 2624663 .. 2624680 - -14.1  -4.84527   CCGAGACATGAAAAA             GCCCGGC CGGA GCCGGGC              TTCTTCATATCGGAA 100 46
        pabB 2612268 .. 2612288 - -18.3  -3.72576   GCGCCGCCGATGAAA            GAGCCCGCG GAA CGCGGGCTC            TTTTCTATTCCGGGG 100 30
HR116_RS12225 NONE
HR116_RS12220 2610247 .. 2610265 - -13.1  -4.72272   TCGGCCCATGAAAAA             GCCCGGC CTGGT GCCGGGC             TTTTTCATGGCTGGC 100 43
HR116_RS12195 2605704 .. 2605723 - -16.4   -4.8622   GCGCGCAATGAAAAA            CGCCGGGC ATCA GCCCGGCG             TTTTCGTTTCCGCCT 100 44
HR116_RS12185 2604290 .. 2604307 - -12.7  -5.40072   TTGGGCGCAAAAAAA             GCCCGGT ATCA ACCGGGC              TTTCGCTGGAGCGGG 100 43
HR116_RS12180 2603922 .. 2603939 - -14.1   -4.4078   TGGCCTGAACGAAAA             GCCCGGC GTGA GCCGGGC              TTTTCAGGGTTGCGG 100 72
HR116_RS12170 NONE
HR116_RS12165 2602318 .. 2602334 -  -7.2  -3.90744   TTTCCCGGGAAAGAA              GCCGGC GTTCA ACCGGC              GCGTCGACTGTTCAA  68 17
HR116_RS12160 2601669 .. 2601689 -  -5.3  -3.36289   TACCAGTTGAACGAA            CGGGCCGAC TGG ATGAGCCCG            GCGCTGCCGGACCTG  53 395
HR116_RS12150 2600131 .. 2600165 -  -9.2  -3.65902   TCTACCTGAGCGAAA    CCCGGGATGGCAGCC TGATGC GGCTGCGG-CCCGGG     GAACCGGCGTTCCAG  68 523
HR116_RS12135 2597486 .. 2597532 - -12.2  -2.87564   CTATCCGCCGATATA CCGAGATTCGGCGGATAACCGC GAT GCGGTTATCCGCCCTACGCCGT GCGTCGATACAGGCC  67 90
HR116_RS12115 2591269 .. 2591279 -  -2.4  -3.15861   GACCATCCGCAGCAA                 CCTC TCG GTGG                 GCATGCCGCTGGACC  42 203
HR116_RS12080 2583429 .. 2583476 - -11.1  -2.89564   TCGTTATTGGATAGA CGCTCGTCGTGGCGGCGTGACA TGTCG CGGCATGCCGCC-CGGCGGGCG CGACATAAGGTGTTC  64 123
        bglX 2581015 .. 2581061 - -19.3  -2.75064   CGGTTGAGGGAACCA GGCGCCGCCCCCGGCCCGG-GC GTTG GCTCCGGGCCGAGGGCTGAGGC GCTGCCGTTCGCCCG  87 73
        pscN NONE
        pscO NONE
        pscP NONE
        pscQ NONE
        pscR NONE
        pscS NONE
        pscT NONE
        pscU 2555254 .. 2555269 - -11.8  -3.64162   AGCAAGCATGTGAAA              GGGGCC TTCG GGCCCC               TTTTTTTCGGCGCCA  75 95
HR116_RS11875 2549750 .. 2549764 -  -5.6  -3.60792   GGCCGAAGCGGGAAA               GCGCCT CCT ATGCGC               GGATCGCCGGGGCCA  57 457
HR116_RS11840 NONE
HR116_RS11835 2543367 .. 2543379 -  -3.3  -3.09492   TGGCCAACGTCAATA                TCGAG CGC CACGA                CCTCGGCGAGCGGGT  44 447
HR116_RS11825 2542054 .. 2542067 -  -2.3  -2.64616   CCTGCAGGCAGACTA               GTCCT CCGC AGGGC                GGGACGGGAGGGCGG  38 53
HR116_RS11820 NONE
HR116_RS11815 2540973 .. 2540987 -  -3.5  -3.01712   GGGCCGCTGGCAAGA              CTCGGC GCTT GCCG-G               CTACTCGTCGCGGCC  43 26
        folE 2540324 .. 2540341 - -14.1  -4.39318   GAAGGAAACGCAAAA             CCGGCCC AGTG GGGCCGG              TTCTTTCGCCAGCGG 100 49
HR116_RS11800 2539138 .. 2539148 -  -8.2  -3.18681   CGCGAATTGCAGGAA                 GCGC TGG GCGC                 GCGGCGTTCCTGGCT  56 90
HR116_RS11700 NONE
HR116_RS11690 2512652 .. 2512679 -  -4.6  -3.35996   GATCGGCATCCACAA        CGGCACCCTGGC GATC GCCCTGGCGCTG         AGTCCGAGCCTGCTG  51 176
HR116_RS11675 NONE
HR116_RS11670 2507627 .. 2507639 -  -9.1  -2.78463   AGTTGGTGGACCAGA                GCGTC GAC GACGC                GTTGCAGACCGAGGC  55 256
HR116_RS11660 2505129 .. 2505140 -  -7.2  -3.25823   GGTGGCGGAGATCAA                GCCG TATC CGGC                 GGAGAACCCCAATTG  54 207
HR116_RS11650 2504168 .. 2504185 -  -5.5  -3.28487   GCAGAGCAAGGAAGA             CCGCG TCGAGTTC CGCGG              CAACCAGGCCGAGGT  51 62
HR116_RS11630 2500232 .. 2500274 -  -2.6  -3.96148   TCCGTCGACGAGAAA GGCCTG-CTGGG-CGACTGG AAGTG CCGCTCGACCCAGGCCGACC AGTACGGCATCTATC  56 337
HR116_RS11575 NONE
HR116_RS11570 2485919 .. 2485967 -  -6.3  -4.56597   TCGCTCGGGGAAAAA GCGTTGGCCTGGCGGCGAGACGC ATG GCGCTGCGTCGCCAGGTCGCCGA TGCGTCAGCCTACGG  78 30
HR116_RS11565 NONE
HR116_RS11560 2483864 .. 2483880 - -15.1  -4.99861   GACGAAGGAGAAAAA              GCCCCGC GAT GCGGGGC              TTTTTGCGTCTGCGG 100 42
HR116_RS11495 2471314 .. 2471324 -  -8.2   -3.5393   AGCAGCGCCTGGAAA                 GCCC GGC GGGC                 GGGGCGCAAGCGACG  65 44
HR116_RS11490 NONE
HR116_RS11485 2468289 .. 2468305 -  -3.6  -4.57569   CGAGCTCCTCAAAAA              TCCCTG AACTG CAGGGT              TGTGGCGGTTCGTCC  69 181
        fabA NONE
        fabB 2466491 .. 2466506 - -11.8  -5.24129   GCTGGGTACAAAAAA              GCGCCC CGGA GGGCGC               TTCATGCGGCGATGG 100 47
HR116_RS11470 2464717 .. 2464740 -   -16  -3.18681   GGGCAACCGCAGCAA          GTGCGCCGCC GTGA GACGGCGCAC           GGCATGGTCAGACGA  86 33
HR116_RS11465 2463838 .. 2463848 -  -8.2  -3.27476   AGCGGCAAGCAGGAA                 GGCG ATA CGCC                 TTTGACGCTGCTCTA  58 380
HR116_RS11450 NONE
HR116_RS11445 2461026 .. 2461036 -  -8.2  -3.19449   CAAACATGTTATGAA                 CGCC TGC GGCG                 AACTGTCAATGGCAG  58 107
HR116_RS11440 NONE
HR116_RS11435 NONE
HR116_RS11430 2456398 .. 2456413 -  -2.4  -3.01712   GTTTCCCCGTGAATA              TCCGCC GGGT GGCGAG               GCCGAGCGTCTCATG  41 438
        panB 2454960 .. 2455004 -  -5.6  -2.64616   TCGCCAGGGAGATGA CCGATGCCGGCGTCGACTGGCA GCT CACCAG-CTACGGCGGCG-CGG TGCATTCCTTCACCG  44 152
HR116_RS11390 2449670 .. 2449685 - -11.8  -4.72272   CCCGGGCATGAAAAA              GCCCGC TTGC GCGGGC               TCTTTCAGGGTACGT 100 51
        gltA 2433954 .. 2433969 - -10.4  -5.24129   GGCGGGCACAAAAAA              GGCTGC CGAA GCAGCC               TTTCTCGCCGGGCGT 100 49
HR116_RS11310 2431349 .. 2431371 -  -3.3  -4.19238   CTGGCAACTGGAAAA           CCGCCACCA GAGCA TGCTGGCCG           GAGAGTTCGACTTCG  63 220
HR116_RS11300 2429958 .. 2429979 -  -5.8  -3.04322   CTGAAGGGGTGAACA           GGCGGG TTTGAAAAGG CCCGCC            AGTATGCCCAAGCCT  49 84
HR116_RS11295 2429618 .. 2429632 - -12.8   -5.4505   GCGGGCAAGAAAAAA               CCGGCC TGC GGCCGG               TTTTCCTGTCTGCCC 100 45
HR116_RS11280 2427352 .. 2427369 - -14.1  -5.53288   CGCAAGCGAAAAAAA             GCCCGGC GGAT GCCGGGC              TTCGAAGTCGTGCTG 100 49
HR116_RS11270 2424677 .. 2424698 - -15.1  -2.82623   GTTCGTGGAGAAGGA           CGCGGCGGA GGTT CCCGCCGCG            GACGGTCAGGAGCGG  78 31
HR116_RS11265 NONE
HR116_RS11260 2422846 .. 2422876 -  -6.8  -4.53777   CCGAAGGAAAAAGAA       GGGCGCCCCC GAATGGGCTGA AGAGGCGCCC       GGAAAGCGGCTCACC  78 36
HR116_RS11255 2422506 .. 2422526 -    -6  -3.07994   CGGAACGGCATGCAA            GCGGCAGG CCGAC CCCGCCGT            TGCGCGGGGCCGGAG  49 46
HR116_RS11250 NONE
HR116_RS11245 2419480 .. 2419490 -  -6.8   -3.7941   GATGCTGCACAACAA                 GGTC CGC GACC                 TGGCGCCCGGCGGCC  64 209
        acnA 2415160 .. 2415179 -   -15   -4.8622   TGCCGGAATGAAAAA            GGGGTGGC CGAA GCCACCCC             TCCGCGCGTACCGCC 100 47
HR116_RS11225 2413226 .. 2413262 -  -8.6  -2.53876   TGGGACTTCAAGTGA   CGGCAGG-CGCGGGGAG CTTC CTCCCCGCGGCCTGATC    TCAGCGGTTGAAGCG  53 26
        ccoN NONE
        ccoO NONE
HR116_RS11200 NONE
        ccoP 2407966 .. 2407987 - -18.7  -2.71483   AGACCGGGGGAAGGA           CCCGCGCCC GGGA GGGCGCGGG            TGGAGGAGGGGTCAG  87 37
        ccoN NONE
        ccoO NONE
HR116_RS11180 NONE
        ccoP 2404391 .. 2404413 - -17.7  -5.18371   TTGCACAAAATAAAA           CGGCGCCGG GGTTG CCGGCGCCG           TCTGGGTCGTGGGGG 100 50
        ccoG NONE
HR116_RS11165 NONE
        cadA NONE
        ccoS NONE
HR116_RS11150 2398839 .. 2398852 -  -2.3  -2.90212   CGAGCATGCCAGAGA               TCCCC AGTT GGCGA                GCTTTAGTCGGGAAG  40 131
        hemN 2397403 .. 2397421 - -11.6  -2.57931   GGCAGCCGGTAGAAG             GGGCGGGG ATT CACCGCCC             TGTCGTGCGGGCAGG  65 52
         fnr 2395906 .. 2395935 - -20.8  -2.78384   TCGGGGCCCATCATA       CAACGGGCCCGC GCTGAG GCGGGCCCGTTG        GCGGTTCGCAGGCGC  91 42
HR116_RS11130 2395322 .. 2395336 -  -7.1  -3.14132   CCCCCGGCGTATCAA               CGCTC GTCGA GAGCG               AACGCGGTGAGACTG  53 7
HR116_RS11125 2394190 .. 2394208 -   -16  -4.44667   CTCTCGAATAAGAAA             CGCCAGGC GGG GCCTGGCG             TCGGGGGCGGAGCGG 100 59
HR116_RS11120 NONE
        mdtI 2392818 .. 2392841 -  -5.9  -2.55351   TTCGTGGAGAGCAAT          CCCGCCG-CG TTCAT CGTCGGCGTG          CGCGAACTGCATGGG  46 326
HR116_RS11105 NONE
HR116_RS11100 NONE
HR116_RS11095 2388780 .. 2388796 -  -7.9  -3.28924   CATCGGCGTGGAGAA              TGCCGGC TTC GCCTGCA              TCATGGCCAATTTCC  56 475
HR116_RS11070 2383835 .. 2383872 -  -7.7  -2.60194   AGGTCCGGAAGGAAG   CAGCCACA-GCGGGAACA TCG TGTGCCGGGGTGTGGCTG   GCGGGGCCGCCTCCA  51 78
HR116_RS11035 2374215 .. 2374232 - -12.7  -4.61873   GCCCATAAACGAAAA             CGGCACC CGAA GGTGCCG              TTTCCCAGGGGCGGG 100 45
        xdhA NONE
        xdhB NONE
        xdhC NONE
        guaD 2367908 .. 2367924 - -15.1  -4.81083   CCGAAGCATGAAAAA              GCCCCGC GAT GCGGGGC              TTTTTCGTTTCCGCC 100 46
HR116_RS11005 2365309 .. 2365324 -  -5.4  -3.14132   TGGGCGGGGGATGAA              GCT-GCG CGT CGCGAGC              CCTGCGGGGCAACGA  48 89
        puuE NONE
        uraD NONE
         alc NONE
HR116_RS10980 2361317 .. 2361328 -  -4.4  -2.79915   AGCCATTCGATGAGA                TGTG CTTC CACA                 GTCTTGTACCTCTTG  42 73
HR116_RS10975 2359590 .. 2359630 - -12.8  -4.32048   GAAGAACACTGAAAA  TTGCGCAACTTTTTGC GCACCGCTT GCAAAAAGTTGCGCAC  TCTCTCGGAGCCCTT  95 445
HR116_RS10970 2358876 .. 2358899 - -12.4  -3.35679   CGGCTCGACGGAGAA          CCGGCCGCAC AGGT GTACGACCGG           TGTGCCTGTCAACTC  72 39
HR116_RS10955 NONE
HR116_RS10950 NONE
HR116_RS10945 NONE
HR116_RS10940 2352924 .. 2352956 -  -4.9  -3.87925   AACGAGCAAAGAGAA     TGCCGCCA-GCACT TGTTGG AGTGCACAACGGCA      GACTGGCCAACGGCC  60 157
HR116_RS10935 2350975 .. 2350996 -  -8.7  -5.44119   GCGAGCGGAAAAAAA           GAAGCCGGAC GAA GTCCGGCC-C           GAGGGAAGGGCGGAC 100 68
HR116_RS10920 2348481 .. 2348520 -  -5.7  -3.01712   GCCGCGGGTCGAATA CCGCGTCA-CGCCG-C-TCG GTG CGAAGCCGGCGCTGGGGCGG GGGCGGCACGCGATT  49 58
         gcl 2345511 .. 2345527 -  -3.6  -2.91276   GGTTGGCGCAGAAAC              GGGGCA TGTCT TGCTCC              TATCGTTCGGTCAAA  42 111
         hyi NONE
HR116_RS10900 2343665 .. 2343704 - -10.8  -3.33696   TGGGCGGGGAAGGAA GAGG-GCGG-CGGCGAAC ACCGGA GTTCGCCGACCGTTCCTC  TCCCCGAGCCCTTCG  69 91
HR116_RS10895 NONE
         pyk 2340566 .. 2340594 -  -7.4  -5.95946   CCAAGAAGAAAAAAA        GACCTCCGGC AGGAGTTGA ACCGGAGGCC        TTGAATGTCCATGGC 100 204
HR116_RS10885 2339467 .. 2339516 -  -8.4  -2.66634   CACCTTACCAGACTA GCCCGTCGG-CGCCAGCGTTCCC CGCTC AGGAGCGCCGCCGGCCGAGGCGC GCGCCGAGGCTGCCA  53 1
HR116_RS10880 NONE
HR116_RS10875 2337927 .. 2337970 -    -3  -3.34894   AAGCGCGGCGAAAGA CGGGTTAAGCGGCGCGAAGAA ATT TTCC-CGTGCGGCTCAGGCCG GCTGTTCCAGGCGCT  46 18
        muiA NONE
HR116_RS10865 2335011 .. 2335034 - -18.2  -4.87893   AAGCCGAATGAAAAA          GCCGGAAGCG CGAG CGCTTCCGGC           TTTTTCGTCAAGCAG 100 48
HR116_RS10850 2332143 .. 2332194 - -10.9  -3.22388   CAGTCAATCGATTAA TCGACGGGCAGCCACCGG-CACAGCC CCG GCCTGTCTCCGG-GGCTGCGCG-CGA GGGGAGTCAGGCCTG  67 32
HR116_RS10845 NONE
HR116_RS10840 NONE
HR116_RS10835 2327941 .. 2327959 -  -7.4  -3.57144   GCCGGGACGCTGAAA             GCGGCT CAGCGCC AGCCGC             GGGTGCGCGCCACCG  62 12
HR116_RS10820 2324111 .. 2324143 -  -5.3  -3.11634   CCGCAGACCAGCGAA      CCGCCGGCCTCGCTG CCG CCGCAGAGCCAGCCG      CAGCCCGGTCCGTCC  49 332
HR116_RS10765 NONE
HR116_RS10760 2314683 .. 2314695 -  -4.1  -3.53761   CAACGGGTGGGGAAA                GACGA AGT TCATC                GGGCGCTCCTTTGCC  51 125
HR116_RS10755 2314075 .. 2314089 -  -2.1  -3.34398   TGTGCCGTCTAAAGA               CCGTT GCGCG AACGA               CAGGTTCTGTGGAAA  45 76
HR116_RS10750 2313638 .. 2313655 -  -9.8  -4.72272   GCGGGGCACGAAAAA             GCCGGC GCGAAG GCCGGC              TTTTTCGTGGTCGCC 100 49
HR116_RS10725 2309580 .. 2309619 - -11.3  -3.03124   CGCCAGCGCCGAAGA  CCTGACCCAGGCCTGCG GTCTGT CGCAGGCCGAGGCCGAG   CTGGTGGCGCGCCTG  62 95
HR116_RS10595 NONE
HR116_RS10590 2283602 .. 2283660 - -15.7  -3.29461   CAACCTGCTGTACAA CGCCGCCCAGCACACCGCCG-CCGGCGG CACG CTGCGGGTCGGCGTCGAGCGGCGCGGCG ACGAAGTGCGGGTGG  80 321
HR116_RS10565 NONE
HR116_RS10560 2274592 .. 2274617 - -12.6  -3.54459   CGAATCCGCTGTAAA         GCGAGTCCGA CCCGCT CCGGACTCGC          TATCAGGCATCCCCG  77 28
HR116_RS10535 2267087 .. 2267116 -  -3.5  -3.14564   CTACTGCTCGACGAA       CCGGACAACCA CCTCGACC TGGCTGCGCGG        CAGGCCCTGGAAAGC  45 129
HR116_RS10525 2265056 .. 2265079 -  -6.7  -3.53761   GAAGCCTTGCTGAAA          CCCTTCGAT GCCCTG ATCGAGGGG           CAGATCGCGGCGATG  58 52
HR116_RS10515 2262574 .. 2262592 -  -6.7  -3.15544   TTCCAGTCGCATGAA            CGGACTGG TCTA CCAG-CCG             CTGTACCGCGAACAG  52 422
        speB NONE
HR116_RS10500 NONE
HR116_RS10495 NONE
HR116_RS10490 2257437 .. 2257457 - -16.9  -4.27316   CTCGGGAATGGAAAA            GGCGAGGGA AAG TCCCTCGCC            TGTCGGGGTTGTGCC 100 45
HR116_RS10485 NONE
HR116_RS10480 2254381 .. 2254401 -  -6.1  -3.53012   CTCTGTCGGTGGAAA            GGCTATCCC AGA AGGATAGGC            GTTCAGGGTATGACC  55 28
HR116_RS10475 2253529 .. 2253567 -  -9.5  -4.07885   CATCCCGGTGGAAAA  CGACG-AGCAACGCCGGCG CCT CGCCG-CGCGGCAACGTCG  CTGAGCCGGTTCCCC  76 89
HR116_RS10465 NONE
HR116_RS10445 2245219 .. 2245258 -  -7.2  -4.56597   TTCGGCGTTGAAAAA GGGGCGGATTCTACCCGT TGCGTG ACGGCCAG--TCCGCCCC  TTCGCTTCAATCGGG  83 32
HR116_RS10440 2244204 .. 2244230 -  -5.9  -3.15544   CGGCAGGGGGATGAA        GCCATCGGGCAT GTCC ATGCC-GACAGC         CTAGCGACACGCCGC  51 52
HR116_RS10435 2243343 .. 2243355 -  -4.7  -3.79747   CCATGGAGGACGAAA                GCCTG CGC CTGGC                CTACGTGGCGATTAC  58 133
HR116_RS10425 2241064 .. 2241077 -  -9.5  -2.52676   TATCGGCGGAAGCGA               CCGGC GTCT GCCGG                TCGCGGGAGGGATCA  56 38
HR116_RS10415 2239542 .. 2239554 -  -4.7  -2.85078   CAGACCCTAGCAAAC                CCGCG AGA CGCCG                TCAGTCGCTAGGCTT  46 40
HR116_RS10410 2238621 .. 2238634 -  -3.1  -3.91506   GGAGGCGGAAAAACA               GGC-CA CGG TGCGCC               ACGTCTCGCGGATGT  58 475
HR116_RS10400 2234280 .. 2234298 -  -3.1  -3.91084   CCATGGCCAAGGAAA            CGGAC-AC ATGC GTAGCCCG             CTTGCCACGATCGCC  58 371
HR116_RS10360 2224150 .. 2224160 -  -3.2  -3.38224   ACGTGATGGTAAACA                 CCAA CTA CTGG                 GATACCGTCAACCAC  48 190
HR116_RS10340 2221299 .. 2221309 -  -8.2  -3.30124   GCGTAGGGCGGATAA                 CCGC AGT GCGG                 TTATCCGCCGGTTCG  60 95
        aceK NONE
        fabF 2207217 .. 2207234 -  -6.9  -4.62783   CAGCCATTGGAAAAA             CCGCGTC TGAT GACGGGG              CAGCAAATTGAACGC  78 204
HR116_RS10260 2202309 .. 2202322 -  -2.3  -3.24747   GCTCGACAGCACGAA               CTCGG CTGC CCCAG                CACGTCAGTGTCGCG  43 105
HR116_RS10255 2201966 .. 2201981 -  -2.6  -2.87319   TCGAAGTCACCAAAG              GGATCGA AAC TC-ATCC              ACCAGGTATCTCTTT  40 20
HR116_RS10250 2200953 .. 2200989 -  -6.6  -4.09963   GCGCAACAACAACAA   CACCAGCCACC-TGCCGG CGC CGGGCACGGTG-CTGACG   GCGAGCTATACGCAC  67 245
        pmpM 2194281 .. 2194308 -  -8.3  -3.01712   TGCCGCTGGGCAACA        GCGCCGAGCCG CTCGAC CTGGTCGGCGC         CGCCTATGCCCTCGG  57 450
HR116_RS10215 NONE
HR116_RS10210 2192496 .. 2192510 - -12.8  -2.62293   AACCGCAAGATCAAG               GCCGCC TTC GGCGGC               AAGGCGAAGATGCTC  64 287
HR116_RS10190 NONE
HR116_RS10185 2189591 .. 2189604 -  -2.3  -2.97588   ATGCAACCTAAATTA               TCGCA GCAG TGCGT                CTATCGATCGCGACT  41 103
HR116_RS10180 2188326 .. 2188352 -  -6.5  -3.17075   GGTGGTCGAACTCAA        CCGCGCCGTGGC CTTG GCCATG-CGCGA         TGGCGTCGAGGTCGG  51 244
HR116_RS10155 2184362 .. 2184377 -  -5.4  -4.07568   GTTTCGCCGGCAAAA              GCGTCGC CCG GC-ACGC              CGAAGGCTCTCGCGA  63 48
HR116_RS10150 2182461 .. 2182471 -  -8.2  -3.57039   GATCTACAACCACAA                 GGCC GAC GGCC                 AGGACGTCAACGGCG  62 323
HR116_RS10130 2178126 .. 2178155 -  -6.2  -2.52464   CTGGCGGGGAAGGCA       GGCGCTGGCGCG GCCGTG CGGGCCGGCGGC        GCTGCTCTTCCGGGG  45 147
HR116_RS10125 NONE
HR116_RS10120 NONE
HR116_RS10115 NONE
         ggt 2174148 .. 2174181 -   -11  -3.05384   CGTCGTTGCACGCAA    TCAGG-CG-CGGGCGG CGGG CCGCCCGCCGTCCTGT     CAGGGTTTCACCACC  66 25
HR116_RS10105 2172918 .. 2172950 -  -6.2  -2.79796   GGGGATTCCATCACA     GTCGTCGCGGCTAGG CCAG CCC-GCCGCCACGAT      GGGCGGCGGAGCGGG  46 84
HR116_RS10100 NONE
HR116_RS10095 2169586 .. 2169626 -  -8.2  -3.63515   GGGTAGGGCGAATAA CGCCC-CCGGCGTTATCCGC CGA GCGGA-ATCGCAGGCGGGTG AGAAATGTCGGATGA  65 89
HR116_RS10090 NONE
HR116_RS10085 2167674 .. 2167703 -  -2.8  -3.28712   CCCGCGCGGCGACAA       CCGCGAGGGCTGG AATGG CCAACGCT-ACGG       TGCCTACCACGATTA  46 170
HR116_RS10075 2165090 .. 2165106 -  -4.3  -3.64236   ATGGAAACCTGGAAA              CGCTGGT ACG ACCCGCA              GCGCCACTTCACCGA  55 265
HR116_RS10060 2162678 .. 2162688 -  -4.6  -3.29144   CTACGTGCTGCAGAA                 CGCC AGG AGCG                 AGGGCTTCCGCATCT  49 418
HR116_RS09995 2147177 .. 2147187 -  -2.4  -3.63627   GGTCCAGACCTGAAA                 GGAG CTA CACC                 ATGACTTGTGCCTAC  49 420
HR116_RS09980 2144708 .. 2144722 - -12.8  -2.55351   GTCCGCGACATCAAT               GCGCGC CTG GCGCGC               GGCGAGATGCCGCAG  67 100
HR116_RS09965 2141701 .. 2141733 -  -5.3  -3.01712   CGGCTTCGGCGAAGA      CCGCCGCACCCGCGA GCG TCACTGGAGCTGAGG      CGCGACTCAGGTCGC  47 32
HR116_RS09940 2137142 .. 2137156 -  -4.2  -2.57211   ATGGCGGGCCAGAAG               CGTCGT TTC ACGAAG               GTTCCCTTTTTCGTG  41 74
        lepB 2136320 .. 2136342 -  -3.3  -3.01791   AGTTCGTGCGCAAGA           CCGACCGCC TGCCC AGCGATCGC           TACAGCGGCGGGATG  42 272
        aitP 2130324 .. 2130364 -  -9.6  -3.28791   ACTGTTCCGCGACAA CCTCGCGCGCTTCTGGGCGG GTA CCGCCATGC-GCG-GCGAGG TGGACTTCGCTCGCG  63 60
HR116_RS09885 2126480 .. 2126493 -  -3.8  -3.41125   TCCAGACATGCAGAA               TCGG CTCGTT CCGA                GATACCCGCTCCTGT  51 116
HR116_RS09880 2125387 .. 2125418 - -10.9  -2.50113   GACTACTTCAGGAAG     CTGCCC-GACGCGGC GTAA GCCGCGTCCGAGC-G      TATGGCGTCGTCAGT  62 36
HR116_RS09870 2123795 .. 2123812 -  -3.3  -3.49475   TCCAGCTTTAGAGAA             CAGCTGA TATG CCCGCTG              GAAATTAAACCGGCG  49 73
HR116_RS09865 2123045 .. 2123057 -  -4.8  -3.02144   GCAGGGTGCGGAACA                GAGC GGTTG GCTC                CGGTGCCAGTGAAGC  47 127
HR116_RS09860 2121642 .. 2121658 - -15.1   -4.7497   GCCAGGCATGAAAAA              GCCGGGC ATT GCCCGGC              TTCTTCGTTGGCGCG 100 46
HR116_RS09840 2116938 .. 2116959 -  -2.8  -3.78775   CTGTCCAGCAGCAAA           GCGGCGGC GCTGAT GGCGGCGC            TGATCCAGGCTCCCG  56 294
HR116_RS09830 2114628 .. 2114645 -  -5.5  -3.21099   CCTGGCGATCATGAA             GGACCCGC GCA GCG-GCCC             GGTGGCGGTGGTGGT  49 391
HR116_RS09765 2100924 .. 2100934 -  -2.4  -2.87051   GGCGGATGACGAAAG                 CGGC ATA GCCT                 GGATGGCCCGGCTCA  40 38
HR116_RS09760 NONE
        lhpB NONE
HR116_RS09750 NONE
HR116_RS09745 2096777 .. 2096798 -  -4.3  -3.05384   TGCCGGGGCAGCGAA           CGCGGCC GGGGCAGT GGCCGGG            GATCGCCCTGGGCGT  45 518
HR116_RS09735 2095343 .. 2095370 -    -4  -3.66178   GGCGTGAACGGGAAA        GCATC-GCCGCGC AGT GAGCGACTGCTGC        CGGAGACTGACAGAC  53 81
HR116_RS09720 2092664 .. 2092706 - -12.7  -2.78596   GACCGCGCCAGCATA CGGGGCGCCGGCGGCCGGG AACAGGG CCCGGCCGC-G-CGCCTCA GTTGCCCGGCGAGTC  68 23
HR116_RS09715 2091823 .. 2091840 -  -5.5  -4.36914   GGCGGTGTTACAAAA             GGGAGCA GGAT TGCTACC              GCCGCCCCGTGGCGG  71 50
HR116_RS09710 2090752 .. 2090779 - -16.2  -3.54741   CAGGACGGGGGGAAA        CGGCGCGGCCCG GCGG CGGACCGCGCCC         TCGGCTTCAGCGGTA  91 32
HR116_RS09705 NONE
HR116_RS09700 NONE
HR116_RS09695 NONE
HR116_RS09690 NONE
HR116_RS09685 2085773 .. 2085791 - -14.6  -3.22521   CGTATACGAATTCAA             TCGGACCG CTG CGGTCCGA             GTCACAGGGCGACGG  80 120
HR116_RS09680 NONE
HR116_RS09675 2083082 .. 2083136 - -12.9  -2.71011   AGCGTGGCGCAACGA GGACGACTGCGTAGGGCGGATAGCGCC AAC GGCGTTATCCGCCAT-C-CAGGCTTCC AGGCGTGCTCAATCC  68 34
HR116_RS09665 2080128 .. 2080167 - -13.6  -3.29144   CTACCGGGTGCAGAA GGGCGACG-GCGG-GCAG TTGGTG CTGCGCCGCGCGACGCCC  TAGCTCGCTTGCGGG  77 41
HR116_RS09630 2070489 .. 2070499 -  -8.2  -2.70932   CGTCGGGGCGAACGA                 CGCC ACC GGCG                 TCATTCGCCATGGCC  54 44
HR116_RS09625 2067649 .. 2067672 -    -3  -3.95073   CTGGACATGCAGAAA          GCCCTGGACC TGGC GGTGAAGAGC           CGCGAGCGCGTGCGC  56 66
HR116_RS09615 NONE
HR116_RS09610 NONE
HR116_RS09605 2061002 .. 2061053 -  -5.1  -2.52464   TGCTGCGGCAATTGA TCGTCGCGG-CG--ATGCGGATCGCC CCG GACTACCCGCCGGGCGGCCGCGACGA GCGGGTGATGGAGCT  44 440
HR116_RS09595 2059970 .. 2060005 - -13.2  -3.35679   TCGCGGCACTGAGAA    GCGGGCGCAG-GCGCTG TCT CAGCGCGCCGCGCCTTC    GATGATCGCCAGGAC  74 8
HR116_RS09570 2055577 .. 2055590 -  -3.1  -3.28791   AGCCTCGGGGGAGAA               CAGCT GACG AACTG                CAAGACCTTTCCGCC  46 50
HR116_RS09565 2055118 .. 2055140 -  -9.1  -2.65264   GCAGGACGGATATGA          CCGCGTGCGG ACAT CCGC-CGCGA           AGTACCGCTACCGCT  56 40
HR116_RS09550 2052844 .. 2052855 -  -5.8  -2.71144   CACCTGGCCGAATGA                CCTG GGGT CAGG                 CCTCCAGCGGCTGCG  46 21
HR116_RS09540 2051057 .. 2051085 -  -8.9  -2.71924   GACGGTGCGTCAAAC       CGCGGCGACGAC CGAAGC GT-ATCGCCGCG        TTACACCGAGGCGGC  54 26
HR116_RS09535 2049335 .. 2049348 -  -3.8  -3.07994   CTCAAGGGCAGTCAA               CTGC TGCCAT GCAG                TCTTATCGTCAGGAA  45 510
HR116_RS09530 NONE
HR116_RS09525 NONE
HR116_RS09520 NONE
HR116_RS09515 NONE
HR116_RS09510 NONE
HR116_RS09505 NONE
HR116_RS09500 2040944 .. 2040968 -  -4.1  -2.54896   TGCCGACGTAACCGA          GGATGCCGCAC ATC ACGAGGCTTCC          CGTTGCAGCAGCGTG  41 13
HR116_RS09495 NONE
HR116_RS09490 NONE
HR116_RS09485 NONE
HR116_RS09480 NONE
HR116_RS09475 2035692 .. 2035723 - -21.6  -3.90112   TGGGGCGCAACGAAA      GCAGCCCCTCGCCC GTGG GGGCGAGGGGCTGT       CGGGTCAGGCCACTT 100 30
HR116_RS09470 2034492 .. 2034535 - -18.2  -2.86271   GCTTTACCAGAACTA CGTCCTCGACC-TGGCGCTGC TGC GCTACGGCAAGGTCGAGGACG GCTACCTGGTGTTCT  86 113
HR116_RS09430 2026245 .. 2026271 -  -8.6  -3.14132   GCGTTGCTCGACGAA         GGCCTGGCCG GGCAATT CGACCTGGCC         TTCATCGACGCCGAC  56 276
HR116_RS09400 NONE
HR116_RS09395 2019573 .. 2019585 -  -9.1  -3.53811   CGGATTGGCCGGAAA                CCGAC ATC GTCGG                CCTGTGGAAGCTGCT  64 289
HR116_RS09380 2017492 .. 2017525 -  -9.5  -3.05384   TCGCCCCCCAGCGAA     GCGCCGGGCG-CGC ATGGACA GCGCCACCCGGTGC     TCGGCCGACCTATGC  60 109
HR116_RS09375 2016802 .. 2016827 - -17.5   -5.4505   GCGGGCAAGAAAAAA         CCGGGCGGCGG TTGC CCGCGGCCCGG          TCGTACGATGCGTTC 100 49
HR116_RS09370 2015968 .. 2015981 -  -5.9  -3.02144   CGAGGCGCTGGAACA               CCCGC AGTT GCAGG                CGCGCGGGCTGGTCG  49 230
HR116_RS09345 2010869 .. 2010881 -  -4.8  -3.66178   CGGTCTAAGCTCAAA                CCTG TTCGG CAGG                GGGAAGTGAAGAGCT  55 80
HR116_RS09335 2007993 .. 2008008 -  -4.6  -3.23447   GCAACCTGGACAAGA              GCCCAG TGGA CCAGGC               CATCGTCGACTCCAT  49 231
        napE NONE
        napF NONE
HR116_RS09300 NONE
        napA NONE
HR116_RS09290 NONE
HR116_RS09285 1997132 .. 1997162 -  -9.7  -3.41051   CCAGGCCGAGCAGAA      GCG-CC-TCGGCCTG ACC CCGGCCGACGGTCGC      GCCGGGCGCAAGATC  63 102
HR116_RS09275 1994787 .. 1994819 - -15.6  -3.87815   TCTGAGCCGGAGAAA     GAG-GACGGGGCGCC CCTG GGCGCCCCGTTGCTC      TTAGCGGCCTTCGCT  91 26
HR116_RS09255 1990138 .. 1990161 - -18.2  -3.03124   CTCGACCTTTCAAGA          CGGGAGTCCC TCCG GGGACTCCCG           TTTTTTTATGCGTCG  90 50
HR116_RS09250 1988911 .. 1988935 -  -4.1  -3.65046   CGCCGACCTGAACAA          GACCTTCAACG ACC CGCTGGCGGCC          AAGGTGCGTTCCACC  54 320
HR116_RS09240 1985549 .. 1985561 -  -6.2  -2.52543   ACGCGGGCGAAGGGA                CGCC GTTTA GGCG                AGCGGAGCCGGCTGT  45 60
        dapE NONE
HR116_RS09230 NONE
HR116_RS09225 1983036 .. 1983053 - -12.7   -4.4078   TTCCCGCAAGCAAAA             GCCCGTC GCGA GACGGGC              TTTTGTCATCCAGCG 100 98
HR116_RS09205 1976433 .. 1976455 -  -4.7  -2.78384   TGCCCGGCCACGACA           CGGACGCCG TTCAG CGACGCGCG           ATCACTGGCAGGCTT  44 27
HR116_RS09200 1974849 .. 1974867 - -13.1  -4.87803   TACTCCTAAATAAAA             GCCCCGC ACAAG GCGGGGC             TTCGGTCTTTCTATC 100 104
HR116_RS09195 1972158 .. 1972188 - -19.7  -3.54741   CAGGATGCCGCGAAA       GCCGCCTCGGTCC ACGAA GGACCGTGGCGGC       TTACTCAGGCGCAAC 100 180
HR116_RS09190 1970105 .. 1970119 -  -4.2  -4.56597   CCGGTCGCGTAAAAA               CGGG TAAACGC CCCG               TTTTTGATACGAGTA  72 292
HR116_RS09175 NONE
HR116_RS09170 NONE
        toxA 1964011 .. 1964037 - -16.6  -3.29511   GCCAGGCCCCGAGAA         GGCCGGCTCC TGCGAAG GGAGCCGGCC         GGTCGCGGCAGCTAC  88 37
HR116_RS09160 1962264 .. 1962279 -    -6  -3.61517   AGCGTGCGGGAACAA              CCGGAG GAGG CGCCGG               AACGGCCGGCGCGTG  57 45
HR116_RS09155 1960630 .. 1960652 -  -4.8  -3.04144   GCTGTATCGCGAAGA           GATCGGCG TGTTCTG CGGCGATC           GCCATCCGCTGTTCG  45 389
HR116_RS09145 NONE
HR116_RS09140 NONE
HR116_RS09135 1956717 .. 1956729 -  -4.7  -3.54459   GGAAGCGGCGGGAAA                CCCGC CAG GCGGT                CATGCATGCGCCAGG  55 58
HR116_RS09130 1955676 .. 1955690 -  -4.2  -4.15066   CATGCACAAATTAAA               TGTTGG AAT CCAGCA               TATTCATTTTTCGAA  63 29
HR116_RS09125 1954678 .. 1954697 - -16.4  -4.98531   TCCGCAAACGAAAAA            CCCGGCGC CATG GCGCCGGG             TTCCCTTTCAGCCTG 100 49
HR116_RS09110 1951513 .. 1951525 -  -5.5  -2.52795   AAGTCCTGCAATGGA                TCGCC CTG GGCAA                GCAGCAGGCGGAGGT  44 177
        hchA 1949845 .. 1949859 -  -4.9  -3.14564   TGACGCCGGGACGAA               CGGGA GATGT CCCCG               TCCGTGGGGCACGGA  48 58
HR116_RS09095 1949197 .. 1949219 -  -4.7   -3.4252   GCGCAGGCAGCATAA           CCCGCCACG GCCAG CGCGGAGAG           GCGTCAGGCTCGACG  53 29
HR116_RS09090 1948613 .. 1948623 -  -4.6  -3.91357   CTACAAGGAGAAGAA                 GGGC AAG ACCC                 TCGTCGATAGCTGCC  61 208
HR116_RS09080 NONE
HR116_RS09075 1945432 .. 1945442 -  -2.4  -3.54109   CGAATGGAAGCAGAA                 CCGC AGC GAGG                 GCGATTCGTTCTACT  48 144
HR116_RS09060 NONE
HR116_RS09055 1941960 .. 1941975 -    -6  -3.15861   GACGACCTGCATGAA              CGCGCC GGCA GCCGCG               ACGTCCTTCACCTGC  51 454
HR116_RS09040 1939543 .. 1939553 -  -6.8  -3.40522   ACGCTTCCAGCATAA                 TGCG TGG CGCA                 GCGCCCGGCGCGGGT  57 56
HR116_RS09030 NONE
HR116_RS09025 NONE
HR116_RS09020 NONE
HR116_RS09015 NONE
HR116_RS09010 1934791 .. 1934804 -  -5.9  -3.63515   GGGGACCTTCAAGAA               GGCCA TCGG CGGCC                TCTACAAGAAAGGCC  59 91
HR116_RS09000 NONE
HR116_RS08995 1930553 .. 1930567 -  -3.4   -4.2558   CAGCGTCGAGGAAAA               CATCCG CTA CGGCCG               TCCGCATGCCAGCGC  63 461
HR116_RS08985 1928499 .. 1928541 -  -9.1  -4.88407   TCAGGCAATGAAAAA GGGGATGG-AGCGTGGCACA TCTG CGTGCCGGCCTGCCATCCCC TTCGTAGTCCCCGGC 100 54
HR116_RS08980 1928122 .. 1928140 -  -5.9  -3.14931   CGGATCGTCCACGAA             GAGCGCC TGCTG GGCGATC             TCGGGGTGCGCATCC  51 133
HR116_RS08965 1925193 .. 1925208 -    -6  -3.14564   GCACTGTTCGATGAA              CTGGCG AGCG CGCCGG               CACACGCCGCGAGCC  51 374
HR116_RS08955 1923450 .. 1923468 -  -3.1  -2.87468   TGCCATCACAGCATA            GCAG-CGT CGCG ACGGCCGC             CCTATCCGGCTTTCC  42 83
HR116_RS08950 1922040 .. 1922052 - -10.5  -3.33261   TGGTAATGCGGACAA                CGGCG CTG CGCCG                GTCTTCCCGCACGAC  66 186
HR116_RS08945 1920796 .. 1920835 - -10.7   -3.5394   AAAGCCTGGCGGAAA GCCGTGCGCGGCTGGCGAG CCTG CTCGCCGGCGG-GCA-GGC  CTGAGGCGCGCTGAG  73 491
HR116_RS08755 1881754 .. 1881775 -  -8.7  -4.72007   GGGTACTAAAACAAA           GCCCACG GTGGGTGA CGTGGGC            TCCGTACTGCAACGA  88 44
        livH NONE
HR116_RS08745 NONE
        livG 1878590 .. 1878601 -  -2.2  -2.64155   CCTTGTCGAAACTCA                GCAT GCTC ACGC                 TTCCCCCAGATAAGC  38 20
HR116_RS08735 1877840 .. 1877855 - -11.8  -5.24129   TCTCGGCATAAAAAA              CGGCCC GCGA GGGCCG               TTTTTTTATGCGCTG 100 62
HR116_RS08715 1871789 .. 1871802 -  -8.1  -3.13403   GTTCCTCGAGGAAGA               GCTGG ACCG CCAGC                AGCCGGGCAGTTCGC  54 80
HR116_RS08705 1870662 .. 1870681 - -12.1  -3.05384   TGCTCTTGTAGGGAA            GGGCCGC CGCTGC GCGGCCC             CTCGCTTCACTTGCC  68 32
HR116_RS08645 1860282 .. 1860330 -    -3  -3.28712   GTTCGGTCCGCAGAA GGGCGCCAGCGCTG-A-ACAGGTG GCG CAACTGGATGCCGCCCTGGCGCAC TTCGCCAAGGTGGTC  46 469
HR116_RS08600 1848317 .. 1848333 -  -5.8  -3.53444   GCACCTTCCGGCAAA             GC-GCCG GTAA CGGCCGC              GACCTGACCTTGCGC  54 484
HR116_RS08580 NONE
HR116_RS08575 NONE
HR116_RS08570 1845451 .. 1845478 -  -8.4  -3.60792   TCGTCAACGCCCAAA        CCGCG-CAGCCTG GCG CAGCCTGGCGCAG        CATCTCAGGCGTGCA  65 30
HR116_RS08565 1844266 .. 1844278 -  -3.3  -3.90048   CTCCGCGGAAAAATA                CCGCA GCG TGCTG                GAGCGAGCGGGAGCG  58 517
HR116_RS08555 NONE
HR116_RS08550 1843028 .. 1843047 -   -15   -4.4078   GCGTGCCAACGAAAA            GGCCCGCT GAGT AGCGGGCC             TTCGGATGCCGGCGC 100 51
HR116_RS08545 NONE
HR116_RS08540 1839511 .. 1839530 -   -15  -4.31397   AGGGGGATAAAAGAA            GGGCGTCC GGAA GGACGCCC             TGAAGATGATCATGG 100 94
HR116_RS08510 1832033 .. 1832057 -  -2.7  -3.14881   GAACCTGGGGATCAA          GTTGCGCAACG GCA CCTTCCGCAGC          GATTTCGGCAACGAC  44 465
HR116_RS08440 1818016 .. 1818031 -  -6.8  -2.73364   GGCTCACCCGAATTA              TCGCCG GGCC CGGCAA               CTGATCCTGAACAAG  48 245
HR116_RS08405 NONE
HR116_RS08400 1811902 .. 1811917 - -11.8  -4.49644   ATGAAAAATGCAAAA              GGCCGC GGAT GCGGCC               TTTTTTTTCGGGGCG 100 45
HR116_RS08385 1808668 .. 1808697 -  -3.3  -3.14051   GGATGGCGATGAACA       CGCTCGAGCGGAC CCTG GCCTGCCTGCGCG        AGGGCAGCGGGGAAA  44 250
HR116_RS08375 1805498 .. 1805529 -  -5.7  -3.35679   TTCCTTCACCTACAA      CCTGGTCGAGCAG TTCTGC CTGCTCGGCGCGG       AGGTCCGGGTGATGC  53 505
HR116_RS08335 1796902 .. 1796916 -  -3.4  -3.70149   GCGACAGCACGCAAA               TGGCCG TGC CGACCC               GGGGCGCCGTGATCG  53 404
HR116_RS08310 1791179 .. 1791191 -  -4.7  -4.13767   GGGGCTAGTCGAAAA                GCGCC TCT GGCGT                TTCCGCGTGGATTCG  65 2
HR116_RS08305 1789925 .. 1789937 -  -5.5  -3.21218   ACCTGGGACGACGAA                CTCAC GCT GCGAG                TGGGTGTGTCGAACG  49 310
HR116_RS08290 NONE
HR116_RS08285 1787601 .. 1787614 -  -2.3  -2.62983   TGGAGGTTCATATGA               GACCC TCCG GAGCC                GATTGCAGAGCGTCT  38 4
HR116_RS08280 NONE
HR116_RS08275 NONE
HR116_RS08270 NONE
HR116_RS08265 1784953 .. 1784981 -    -3  -2.87931   GCGATGTTCGAGAGA        GCAGAGCGAGTC ATCGG GAACCTCCCTGC        TCGAGCGCGCCCTGA  42 7
HR116_RS08260 NONE
HR116_RS08255 NONE
        dnaB 1782662 .. 1782688 -  -8.7  -2.83164   TCACGCATGACTAGA        CTCCTTGCCGGC TCCC GCCGGCGAG-AG         ATCGGAAGTTCAATG  55 48
HR116_RS08240 NONE
HR116_RS08235 NONE
HR116_RS08230 NONE
HR116_RS08225 1780460 .. 1780473 -  -2.3  -3.90112   GTGCCGCGAAGGAAA               CTACG CATC CGTGG                TCTCCTCGCTGTTGA  54 12
HR116_RS08220 1780243 .. 1780256 -  -3.1   -3.5812   TAGGCATCAGAAAGA               CTCCTG GTT CAGG-G               AACGCTGCCTGTCGG  51 3
        yejK NONE
HR116_RS08210 NONE
HR116_RS08205 NONE
HR116_RS08200 1776266 .. 1776281 -  -3.2  -3.18264   CGCTTCATTGATCAA              CGACTT CGAC ATGTCG               ATCCCTCCCCTAATC  44 49
HR116_RS08195 NONE
HR116_RS08190 1773992 .. 1774014 -  -6.3  -3.04144   TTGCCAGTGGCAACA          CCCAGCTCGCC GCC GGC--GCTGGG          GTCGGTCCCTGGTGG  51 205
HR116_RS08185 NONE
HR116_RS08180 NONE
HR116_RS08175 NONE
HR116_RS08170 NONE
         ssb 1770238 .. 1770255 -  -4.1  -3.51232   GGCGCGGTAAATTAA             GACCGGCG TTT CACCG-TC             GCTTCGGCAATGCGC  51 289
HR116_RS08160 1769834 .. 1769847 -  -3.7  -2.72152   TCGATCAGAAATCGA               GCTGC TGTT GCTGC                TCCTGGGCAAACCCT  42 1
        topA 1767611 .. 1767632 -  -4.3  -3.11569   GGATCGATGGAAAAT           GTTCAGGCC ACGC GGCCTGTAT            TTCCTTGCAGGTCTG  47 181
HR116_RS08150 NONE
HR116_RS08145 1763630 .. 1763649 -  -9.2   -2.6914   GATGGGGCACACAAT            GGCAGGCC AATC GGCATGCC             TCAGCAGGAAATACT  57 62
HR116_RS08140 NONE
HR116_RS08135 NONE
       pilO2 NONE
        pilP NONE
        tadA NONE
HR116_RS08115 NONE
HR116_RS08110 NONE
        tadA NONE
        pilV NONE
        pilM 1752526 .. 1752580 - -29.6   -2.8474   CGGCAGGGAGAAGGA TCCCGATGGGTAGCCTGATGGTCCTG GAG CAGGAGCATCAGGCTACCCATGGAGA GGGGAAAAGGAGGGG 100 361
HR116_RS08090 1751550 .. 1751586 - -21.7  -3.14132   GTTTTCCTCGATGAA    TGCCGGAAAACCGTCCC CGC GGGAAGGTTTCCCGGCA    GGGGGTGGTGAGAGG 100 47
HR116_RS08085 1751198 .. 1751215 - -12.7  -5.37593   CTTGAAATGAAAAAA             GCGCCCA GTGT TGGGCGC              TTTCAGGGTCAATGA 100 170
HR116_RS08080 1750381 .. 1750399 - -11.7   -3.6682   GCGTAGGTAGTGAAA             GGCCCTC GGGAT GAGGGCC             GGTATTCAATCAAGC  75 46
HR116_RS08075 1750075 .. 1750097 -  -9.8  -3.72576   CCTTTCGGTAGGAAA           CACCAGTCCC AAG GGGACTGAGG           TCCCCTAAATGGGAA  74 52
HR116_RS08070 1749773 .. 1749813 -  -4.6  -3.91798   CAATTCTTAACCAAA TCGGA-GAGGTCACCACCC GACA GGGGGATGACCCCGTCTGG  GTTGAGTTAGCAGAA  60 65
HR116_RS08065 1748442 .. 1748473 -  -7.2  -3.02263   AGAGGTCTCCGAATA      CGCAGGCCTC-TCCC GCG GGGATGAGGTCCCCG      CGTGGGTGGGTAGGA  54 213
HR116_RS08060 1748039 .. 1748060 - -10.1  -3.08508   GACCTGCGAAAAGGA           TGATCCCGC CGTA GCGGGATCG            TGGTGAGGGGAGAGC  62 40
HR116_RS08055 NONE
HR116_RS08050 NONE
HR116_RS08045 1746638 .. 1746659 -  -9.3  -2.62184   CCTGGTGGTAGACGA           GGAGCGCCC TTGA GGGAGCCCC            TCAAGGGAAGTGGTT  56 48
HR116_RS08040 1746286 .. 1746320 - -12.7  -2.71263   AACCTCCTGGAAGGA     GGAGCCACGCCGCCC TCGAG GGGCGGTGAAGCCCC     TCGGGGGTGTAGTCC  68 65
HR116_RS08035 1745623 .. 1745641 -  -4.4  -3.03159   CCAAGCGCGGGAACA             TGAGGGCC ATG GGGCCTCC             TTGAGTCTGAGAGGG  45 46
HR116_RS08030 1744111 .. 1744151 -  -9.9  -4.34737   GGATGAAGGAAGAAA GCAGGGCATGCACG-T-CCC TTTC GGGTATCG-GCATACCCTGC AGGGGGGAGTGGAAG  85 61
HR116_RS08025 1741808 .. 1741825 -  -8.4  -5.39721   GCATTATATAAAAAA             GGCCAC TCAAAG GTGGCC              TATCTGTTCATGCTG 100 33
        tcmP 1739717 .. 1739734 -  -4.1  -3.02166   GCGCGAATCAAATGA             CTATCAC CTTA GTGATTG              GCCTTTCTGTTCGAG  45 183
HR116_RS08010 NONE
        tcmP 1737361 .. 1737375 -  -2.1  -4.16842   CCCAGCTCGAACAAA               CCATC ATTGA GATAG               CGTGCCAGGAATTGG  59 214
HR116_RS08000 NONE
HR116_RS07995 1735653 .. 1735664 -  -2.2  -2.78463   AGGGCGCGGATTACA                GACG TTGC CATC                 GGCCGTTCACCTCCT  39 9
HR116_RS07990 NONE
HR116_RS07985 1734502 .. 1734516 -  -4.2  -3.15861   GATCAGGCCGAGCAA               CTCCTG GTA CATGAG               TTGGCGTGCCTGAGC  47 94
HR116_RS07980 NONE
        traD NONE
HR116_RS07970 NONE
HR116_RS07965 NONE
HR116_RS07960 1728951 .. 1728963 -  -2.7  -2.70525   TCCGTCGAAATCAAG                GATAA GCT TCATC                TCAATGCTCCGCTGT  39 156
HR116_RS07955 1727741 .. 1727752 -  -4.4  -3.41134   ATACGGACCAAGGAA                TGGT TGGT ACCA                 GAAGCTTAGGTTTGT  51 126
HR116_RS07945 1726999 .. 1727009 -  -2.4  -3.67877   ATTCCGCAAGAAATA                 CTCG GCG CGGG                 TCCGGGGTATTTTTT  49 40
HR116_RS07940 NONE
HR116_RS07935 NONE
HR116_RS07930 NONE
HR116_RS07925 NONE
HR116_RS07920 NONE
HR116_RS07915 NONE
HR116_RS07910 NONE
HR116_RS07905 NONE
HR116_RS07900 NONE
HR116_RS07895 NONE
HR116_RS07890 1718207 .. 1718222 -  -3.2  -5.03314   TGGAGTCCCAAAAAA              TGGATG TTGG CATCCT               CTCCGATTTCTTCGT  79 62
HR116_RS07880 NONE
HR116_RS07875 NONE
HR116_RS07870 NONE
HR116_RS07865 NONE
HR116_RS07860 1711254 .. 1711272 -  -6.6  -4.28548   AGTCATTTAGTAAAA             GAGAGGGC TGC GCGCCCTC             CTTTTTACACGCTAC  73 30
HR116_RS07850 NONE
HR116_RS07845 NONE
HR116_RS07840 1709729 .. 1709757 -  -7.4  -3.09648   TAAGAGACTGCAACA       GTCCT-CAGGAGG CTAG CCTCCCGAAGGTC        CGTCAACAGCTAGCG  54 9
HR116_RS07835 1708063 .. 1708074 -  -7.2  -3.30243   AGTTAGCGGCCAGAA                GCGG ACGT CCGC                 CACTTACTAGATAAA  58 122
HR116_RS07830 NONE
HR116_RS07825 1704221 .. 1704240 -  -9.2  -3.15503   TGTCAATATGGAATA            GCCCGCCT ATTT AGGTGGGC             TTTTCTGTTTCTAAG  61 262
HR116_RS07745 1691134 .. 1691145 -  -2.2  -3.93782   CTATTTAACAGGAAA                GCAG GAGG CTAC                 TCAAATCAAGCGGTT  54 104
HR116_RS07740 1690358 .. 1690373 - -11.8  -5.31456   TGAATGCACAAAAAA              CCCGCC GTTC GGCGGG               TTTTCTGTTTTTCGC 100 46
HR116_RS07725 1687618 .. 1687646 - -20.5  -3.61398   CGTTGCCGCCAAGAA        GAAAAAACCCGGC GAT GCCGGGTTTTTTC        GTTGCCTGTCGGTCG 100 42
HR116_RS07715 NONE
HR116_RS07710 1684036 .. 1684074 -  -5.4  -3.53091   ATGCTCGGGGGGAAA  TG-CGTCAG-CGTCTGCT GGGCG AGCAGACGGCCGATGGCA  TATTGAAACAGCTCG  54 355
HR116_RS07695 1682516 .. 1682530 -  -2.7  -3.85698   CGCTGTTCGGAGAAA               GCCTG GCCCA CTGGC               TGGCGGACGGAACCT  56 415
        arsC NONE
        wrbA NONE
HR116_RS07670 1679586 .. 1679606 -  -6.8  -3.14344   GATCTGCTGGAGCAA            CTGGATCG CGCTT CGCTCCAG            GCTCAGCGCAAGCTG  52 257
        purM NONE
        purN NONE
HR116_RS07645 1675027 .. 1675042 - -11.8   -5.4505   GCGGGCAATAAAAAA              CCGGGC AATG GCCCGG               CTTTTCGTGGGAGGG 100 45
HR116_RS07635 NONE
HR116_RS07630 1673839 .. 1673855 -  -6.5  -3.02144   CCATTGGCCTCAACA              GCCTTCC AGG GGAAGGA              TGTAATGGCCATGGA  51 3
HR116_RS07625 1673444 .. 1673484 -    -2  -3.78329   CTGCATCAAGGCAAA TCCA-GCCTATTTCAATAG CAGG CTAATCAAATAGCCCTGGA  ATTGAGAAAAACCTT  52 42
HR116_RS07620 1673183 .. 1673213 -  -9.6  -3.83998   GGACCTGAGATCAAA       GGTGCGCCCCCG AAGTACG CGGGGGCGCATG       GTTCAGGCCGATTTA  74 28
       lpxO2 1669915 .. 1669943 - -15.3  -4.19238   CTGTTAATGGGAAAA        TTACCGTGGCAGC CGG GCTGCCACGGCAT        CTGAATCAGCCGAAG 100 31
HR116_RS07565 NONE
HR116_RS07560 NONE
HR116_RS07555 1655172 .. 1655186 -  -7.1  -2.90763   GCGATAGTTCACAGA               CCGTC GGTCG GACGG               AGCGTTCGCCCTACT  50 36
HR116_RS07550 1654691 .. 1654703 -  -4.7  -4.10795   TCAAAAAAATGTAAA                CGGGC GGC GCCGG                GTAGCGCCGCTTCAG  65 44
HR116_RS07545 1652530 .. 1652543 -  -3.7  -3.03441   GACCACGGTGGAACA               GTCCG GCGC CGGGC                GCGACCTGGAGAGCT  44 163
HR116_RS07535 1651364 .. 1651391 -   -17  -4.74103   GTCGGAATGCAAAAA        GCCCCGGCGCTA TCGC TAGTGCCGGGGC         TTTTCGAATGTGGTT 100 36
HR116_RS07530 NONE
        mprF NONE
HR116_RS07515 1646275 .. 1646330 -  -5.9  -2.52464   GCTCCGCTGAAGCCA GCCTGAATGCCCCCGGCAGGC-TCAG TCTAG CTGGCGCCGGCCGGGGACAAGAAGGG CGGAGCGGGGAGAGC  45 51
HR116_RS07510 1645612 .. 1645631 - -10.6  -5.00616   CTCCGCTGCAAAAAA            GCGCGCCC GATT GGGCGCGT             TTTTTTGCGCGTTTC 100 41
        rimO 1642089 .. 1642105 - -15.1  -4.72272   GTTGGCGATGAAAAA              GCCCCGC GGG GCGGGGC              TCTTCAGGGGGGCTC 100 39
HR116_RS07495 NONE
HR116_RS07490 1641181 .. 1641196 - -11.8  -3.67775   AGCGCCATGCAAGAA              GCCGCC CACG GGCGGC               TTTTTTCATGGCGGT  75 40
HR116_RS07480 1638435 .. 1638466 -  -7.8  -4.09685   GGTGATTTCCGAAAA      CCTCGCGCAGGCTG CCGT CAGCGCGCGCGGCG       ACCAGCTCATCACCA  69 430
HR116_RS07450 1635415 .. 1635436 - -15.9  -3.70902   TGCGCCATACCGAAA           GGGCCTGCA GCAA TGCAGGCCC            TTTTTCTTTGCCCGG  90 93
HR116_RS07375 1620914 .. 1620932 -  -4.5  -3.25223   GATGCAGACCAGCAA             GTCGATC ATCCA GATCGGC             CTGTCCTGCGGTTTC  49 187
HR116_RS07290 1603137 .. 1603147 -  -8.2  -3.28924   GAGCCCCGCGGATAA                 CGCC AGG GGCG                 TTATCCGCCCTACAG  60 35
HR116_RS07280 1599598 .. 1599608 -  -5.4  -3.10354   TAGACTCAGTCAAGA                 CAAG AAC CTTG                 TACGGATCGGTAACA  47 81
HR116_RS07275 1599057 .. 1599096 - -14.3  -2.72471   CGCCGAGTACACAAT  GATCGCGCC-GGATGGGC GAGCT GCCCCTCGTGGCGCGATC  CTTCGGAGGTCGACC  75 58
HR116_RS07265 1596243 .. 1596268 -   -19  -2.68719   CCACCATAGTACAAG         GCCGCCGCGG GGTCAG CCGCGGCGGC          GGCGTTTCTCGTCAG  87 37
HR116_RS07260 NONE
HR116_RS07255 1594585 .. 1594603 - -10.2  -5.40072   CTGGGGCGAAAAAAA             GCCGGCCA TCA CAGCCGGC             TCAGGGTAACCGTGA 100 45
        pbpG 1593249 .. 1593259 -  -8.2  -3.33261   GGCCAAGGTGCAGAA                 GGCG CGG CGCC                 CGACCAAGCCTACGC  58 143
HR116_RS07225 1588380 .. 1588398 -    -3  -3.09175   AATCGCTATCGAATA             CCGGTCAA GGC TGGAACGG             CTGGTGATGCTCGGC  43 11
HR116_RS07220 NONE
HR116_RS07215 1586839 .. 1586858 -  -7.8  -4.25104   CGGCGTCTACGAAAA            CGCCTTCC CCAA GGAAGGCC             GCAAGCGCGCCATGA  74 309
HR116_RS07175 1577886 .. 1577915 -  -4.1  -2.54325   GGGTCGGAAATAGAT       TGCCCGCCGCCGGC CTC ACCAGCG-CGCGCG       GGTCGAACCGATCCA  41 11
HR116_RS07170 1576385 .. 1576400 -  -4.6  -2.70932   TGGCGGTTTCAACCA              TGGTGG CCGG CCTCCA               GCATCTGCTCCGGCC  44 3
HR116_RS07165 1575622 .. 1575636 -  -4.2  -3.75153   GTCGCGGAATGCAAA               GCGG TCGGCAC CCGC               ACTGTGAGCCGGTAG  56 151
        cbpD 1574278 .. 1574306 - -26.1  -4.07568   GCCTGGCGGCGAAAA        CGACTGCCGCCCG GAG CGGGCGGCAGTCG        AGGGCGTTACAGCAG 100 32
HR116_RS07155 1572889 .. 1572910 -  -6.5  -3.14602   CCGATGGCAGCAACA           CGCCTGGCGG TTT CGGCCAG-CG           GCTGGTGCGAGTCCA  51 289
HR116_RS07135 1568627 .. 1568640 -  -3.7  -2.81966   TGAAACCTTAGCAGA               CTGGC GAAA GCCCG                CGACAGAGCCTGTTT  42 52
        cysZ 1567653 .. 1567682 -  -9.9  -5.40072   CGGCGGGTAAAAAAA       GGCCGCCTGCG TGGGGAGG CACCGGCGGCC        AGTCGGTTCGGCAGC 100 185
HR116_RS07125 1565313 .. 1565338 - -11.2  -4.96501   CGGGATAAAAACAAA         GGGCACGGAA ATAGAG TTCCATGCCC          TTGTCGGCTGAATGA 100 139
HR116_RS07120 NONE
        plcR NONE
HR116_RS07110 1560846 .. 1560867 -  -2.1  -2.57132   GCCGCGTTGGAGAAC           GCCTGCCGC GAGC GCGACATCC            ACTTGCACCTGGGCA  38 127
HR116_RS07080 NONE
HR116_RS07075 NONE
         pta 1553055 .. 1553075 -  -8.1  -2.52464   GCCTGGCCGAAGCCA            GTGCCGCCC ACT GGGCGGCGT            TCCTTCAGGCCGGGG  53 30
HR116_RS07065 1551989 .. 1552006 - -14.1  -4.72272   GGCCTGGACGAAAAA             GCCCGCC ATTC GGCGGGC              TTTTTCATGGGCGCT 100 58
HR116_RS07045 1548395 .. 1548418 - -14.6  -3.11999   AGGAAAGCGATGCAA          GCCCCTCTCGC GGC GCG-GAGGGGC          GGCGAGGAGGGTCAG  80 37
HR116_RS07030 1545534 .. 1545560 -    -5  -4.08692   TAATCGGCCCCAAAA         CCTTGACAGGTC GAC GACCAGTCTACG         GCAAAGGGCTGCGAG  63 56
        ssrA 1545132 .. 1545162 -  -9.7  -5.27335   CTGGGCAAAGAAAAA       GCCCCTGAAATTC ACTAG GAAAATCAGGGGC       TTATCGTTTGCGTTT 100 40
HR116_RS07020 1544027 .. 1544044 -  -8.3  -3.55563   AGTTTATTGGCGAAA             GGCGTCC GGCC GGGCGCC              TTTCGCTTTTGTCCG  65 47
HR116_RS07015 1543406 .. 1543423 -  -4.1  -3.10611   GCCAGCGGAAGAAAC             GCAGAAG GGGA CTTCTCC              TTGTCCCACCTCCCG  45 90
HR116_RS07010 NONE
HR116_RS07000 1540989 .. 1541002 -  -3.7  -3.41587   TCCCAGAAAACGTAA               GCCCC TACA GGCGC                TCCGGCAGCGTATTC  51 16
HR116_RS06985 NONE
HR116_RS06975 1537191 .. 1537217 - -10.8   -3.1355   GGCATCGACAGCGAA         GCCGAGTTCCAG CGC CTGGAGCTTGGC         CACGAACAACTGGTG  64 433
HR116_RS06965 1536038 .. 1536053 -  -2.5  -3.01712   GGGCGGCGGGGAAGA              GCGCGC TCATG GC-CGC              ACCGCCGCGATCAGT  41 16
HR116_RS06960 1534667 .. 1534677 -  -8.2  -3.67792   CGAGAGGGATTTAAA                 CCGC ATG GCGG                 CGGCCGTGCGCGGCG  65 148
HR116_RS06955 NONE
HR116_RS06950 NONE
HR116_RS06945 1531140 .. 1531164 -  -3.4  -3.24747   CGCGGACATGACGAA         GCTCCTGC-CG GACG CGTGCCGGCGC          TGCGCGCGCCTTTCC  44 101
HR116_RS06940 1529436 .. 1529446 -  -2.4  -3.57561   CTCGAAGCCGGGAAA                 CGGC TGC GCTG                 GCACTGGGACATGTA  48 396
HR116_RS06920 1526594 .. 1526612 -   -16  -5.24129   CTGTCCCACAAAAAA             GCCCCGTC GGG GACGGGGC             TTTTCCTTGCATTCG 100 59
HR116_RS06890 1520120 .. 1520151 -  -6.4  -3.53091   ACGCCCTGGTGGAAA      CCGCTGGCC-GGCGG TTG CCACCTGGACCGCGA      CATGCCGGCCTTGCT  56 148
HR116_RS06880 NONE
        prpB NONE
        prpC NONE
        acnD 1513813 .. 1513845 -  -5.4  -2.57013   CGGCAATCGAATTCA      GGGGCAGCGGATGC GTTCG ACAGCCGCTGCCGG      TCGTCGGCGGATGAC  43 86
        prpF 1512548 .. 1512583 -   -19  -3.01712   GTCGTGGCTGCAAGA    CGCCCCGGCCTTTCGC GGTG GCGGAAGGCCGGAGCA     AGGATAGGTCGGTTC  91 39
        prpD 1510825 .. 1510845 - -10.4  -2.60075   GTGCCTGGAAGCAAC            GCGCCTGC GTGGT GCAGGCAC            TGGCGCGGCTGGCCG  57 158
HR116_RS06845 1509189 .. 1509208 -  -9.2  -5.07652   CGCCGGAAAAGAAAA            GGGGCCTC GGAC GAGGCCCT             TTTTTCGTTGCGCCG 100 107
HR116_RS06830 1503597 .. 1503607 -  -4.6  -3.33696   CTGGTGCTCAACGAA                 CCGG AAA CCAG                 CCTGCATCCCGACCT  49 247
HR116_RS06810 1500474 .. 1500530 -  -8.4  -2.71712   TGCGGGCGGGTAAAG CGCCCGCGCATGGAGACGGCCCGCCCC GCAA GGTGCGGGCCGTCGTTTTGTCCGG-CG GCTGCTGCGCCTCTC  54 91
HR116_RS06795 1492674 .. 1492711 -  -7.6  -3.53012   GGTTGCTGCGGGAAA   GCCGCCTGCCTCTGGTG CGGAT CGCC-GAGGAATGCGGC   TTCTCCAGCCAGAGC  60 224
         lon 1489363 .. 1489391 - -17.5  -3.75153   CGGCTCGAATGGAAA        GGGCGCCAGCA TAAACCC TGCTGGCGCCC        GAGTGCCAAGGTTGG 100 81
HR116_RS06780 1488910 .. 1488926 -  -2.1  -2.68823   GTCTTCGTACAGAAT              GTGTCCG CCG CGGGCAG              CGGTTTCAGCGCACC  39 31
HR116_RS06775 1488034 .. 1488046 -  -3.3  -3.55622   TTCAATCGGCTGAAA                GCAGC GTG GTTGC                TGGTCTGGCGGCGGA  51 60
HR116_RS06770 NONE
        cmoA NONE
        cmoB 1485533 .. 1485550 - -11.3   -5.5943   AAAGCATGAAAAAAA             GCCCATC CGAG GATGGGC              TTTACCCTATCCGCT 100 42
        nadB 1472468 .. 1472482 -  -8.5  -3.04144   CGGCGAGCCGGAAGA               CGCCG ACCTG CGGCG               GATGGTGCGGATGAT  55 470
HR116_RS06680 1470968 .. 1471007 -   -15  -4.07885   CATTTCCTTTGAAAA  CGCAATGGCCGGAGCACGC TCT ACGTGCACCGGCCATGG-G  AATACTGGCGGGCCG  93 69
HR116_RS06675 1469645 .. 1469675 - -10.3  -3.64703   TGGCGCGCATCGAAA      GCGGCGCCC-AGGC CATC GCCGAGGGCGGCGC       CGAGCGTATCGACCT  70 464
HR116_RS06660 NONE
HR116_RS06655 NONE
HR116_RS06650 NONE
HR116_RS06645 NONE
HR116_RS06640 1462419 .. 1462435 - -10.8  -5.75342   CGCCCGGAAAAAAAA              GCCCGC ACGAG GCGGGC              TGGAAAACGCCACAC 100 65
HR116_RS06620 NONE
HR116_RS06615 NONE
HR116_RS06610 NONE
HR116_RS06605 1454937 .. 1454953 -  -2.2  -3.72576   GCGCGGCGGATCAAA             GC-CCCG CCAG CGGATGC              TCGCCCTCCCAGGTC  52 4
        mmsB NONE
HR116_RS06595 1453183 .. 1453193 -  -8.2  -3.85698   GCTCGCCGGGATAAA                 CCGC TGC GCGG                 GGGATGCACTCGTTA  71 55
HR116_RS06590 1452439 .. 1452457 - -13.1  -3.21595   AAGGCTGACGACGAA             GGCGCCC GAGAG GGGCGCC             TGGTCTTTTCAGTAG  73 34
HR116_RS06580 1449374 .. 1449385 -  -3.6  -3.31144   CCGCGACCGTGACAA                CCGC GGGC GCGA                 CTGGAACCGTTCCTG  47 78
HR116_RS06555 NONE
HR116_RS06550 NONE
HR116_RS06545 NONE
HR116_RS06540 1444819 .. 1444837 -    -3  -3.55444   GCTCCATGCGGGAAA             GGCTGTCG CTC CGACAGAT             GCCATTCAGCTTAGC  51 113
HR116_RS06535 NONE
HR116_RS06530 1442901 .. 1442922 - -15.1  -3.90291   ATGCCGGGAAGGAAA           GGGACGGCG CGGC CGCCGCCCC            GGCGGTTCATTTGAG  91 32
HR116_RS06525 1441438 .. 1441451 -  -5.9  -2.66812   AATGCCATTATACGA               CGCCC GCTC GGACG                GCTTTTGCGGCCAGG  46 149
HR116_RS06520 1441125 .. 1441136 -  -4.4  -4.60487   TATTACCTTTAAAAA                GCTT ATGT AAGC                 TATTGAATTTAAAGG  72 259
HR116_RS06515 NONE
HR116_RS06510 1439651 .. 1439669 -   -11  -5.81412   GCGAGGCAAAAAAAA             GCCCTCAC TTG ATGAGGGC             TTTTACGAATCTCTT 100 46
HR116_RS06495 NONE
HR116_RS06490 NONE
HR116_RS06485 1434015 .. 1434039 -  -2.7  -3.14931   GTCACTGCTCAGGAA          GGAGAGGACCT GGC AGATCGGCCCC          GAGCCGGCGGGGCGC  43 54
HR116_RS06480 NONE
HR116_RS06475 NONE
HR116_RS06470 NONE
HR116_RS06465 NONE
HR116_RS06460 NONE
HR116_RS06455 NONE
HR116_RS06450 NONE
HR116_RS06445 NONE
HR116_RS06440 NONE
HR116_RS06435 NONE
HR116_RS06430 NONE
HR116_RS06425 NONE
HR116_RS06420 NONE
HR116_RS06415 NONE
HR116_RS06410 1424928 .. 1424951 -  -2.2  -2.78463   AGTGGTTGGATGACA          CTGCACAGGC TGCC GCGCGCGCGG           CGAAGGGGCGAGGCG  39 76
HR116_RS06405 NONE
HR116_RS06400 1423124 .. 1423142 - -17.4  -4.43877   CAAGGGGGAAAGAAA             CCGCCGGC CGG GCCGGCGG             GAAGGGATTACAGGC 100 33
HR116_RS06395 1422729 .. 1422753 -  -9.9  -3.64703   CGGCGCCCAGTGAAA          CGTCACGGCCA GGT CGGCCATGGCG          TTTTCTACGCGATCA  70 30
HR116_RS06390 NONE
HR116_RS06385 NONE
HR116_RS06380 NONE
HR116_RS06375 1418104 .. 1418120 - -10.9  -4.07568   CTTTTGTGCTTAAAA              TACGCTC AAT GAGCGTA              TCGCGCAAGTGCCAT  82 69
HR116_RS06370 NONE
HR116_RS06365 1416990 .. 1417017 - -12.7  -3.07816   GGGGCATTGATTGAA        TGGGCCTTCGG TTGCAG CCGAAGGCCCC         ACTGTGAAGAGAGGG  71 372
HR116_RS06350 NONE
HR116_RS06345 NONE
HR116_RS06340 NONE
HR116_RS06335 1414911 .. 1414924 -  -8.1  -3.55622   CGTAACTTCCCCAAA               CCCAC GGCA GTGGG                TAGGGCGTGTCTCAG  65 44
HR116_RS06330 NONE
HR116_RS06325 NONE
HR116_RS06320 NONE
HR116_RS06315 NONE
HR116_RS06310 NONE
HR116_RS06305 NONE
HR116_RS06300 NONE
HR116_RS06295 1408981 .. 1408993 -  -3.3  -2.70932   GGGTGCGCTTAAGCA                TGGGT GCT ACCCC                CGGACAGGTCGCCGG  40 6
HR116_RS06290 NONE
HR116_RS06285 NONE
HR116_RS06280 NONE
HR116_RS06275 1406116 .. 1406133 - -14.1  -2.97707   CGACACCAAGAAGTA             GGGCCGC TCAC GCGGCCC              TTGTTGGCGTCCATC  75 15
HR116_RS06255 1402962 .. 1402982 -  -2.4  -3.71792   GCAATGGAAAAGGAA            GGGGGTCA GCGAT TGTCCGCC            TGCGGGCGCACGGCT  52 10
HR116_RS06250 NONE
HR116_RS06235 1400471 .. 1400489 -  -3.8  -3.39895   CCTCCCACGAATCAA             GGTCTTTC GTC GGAAAACC             CAGGGGGCAGGTAGG  51 187
HR116_RS06230 1399518 .. 1399540 -  -5.4  -3.53012   CCCTGTCCGTCGAAA           CCGCCAAGGG TAG CGCCTGGTGG           GATAGCGGGCCAGCC  53 71
        catB 1398710 .. 1398739 -  -2.7  -3.34398   GGGCTGGCGGAAACA       CAGCGTTTCGTTCC GCC GGTACGGT-CGCTG       GAGTAGCTCTGGCAC  45 141
HR116_RS06220 1397592 .. 1397614 -  -6.8  -3.61517   AGCTCCCTCGAAGAA           CGGCCGCGGG CGT CAAGCGACCG           GCCTACCCGTTGTCG  59 112
HR116_RS06215 1396140 .. 1396161 -  -5.1  -3.68827   GAGTGACGACTGAAA           CACTCAGGCC TGG AGCC-GAGCG           ACGAGCGGCCGCCGG  58 43
HR116_RS06210 1394780 .. 1394803 -  -5.2  -3.33696   CGGCGCTTGAACGAA          CCGCGCAAGT TCTC AGTCGCGCAG           CACCAGCGGCGCGCC  50 14
HR116_RS06205 1393569 .. 1393589 - -16.9  -3.57144   GGGTCGAGGCGGAAA            GACTGGCGC GCA GCGCCAGTC            TTTCGCTGAGCCAAC  89 244
        gspI 1357463 .. 1357477 - -11.4  -3.42699   ACTCATCGAGCAGAA               CGGCGA GGT TCGCCG               GGTGCCCATGCAGCG  70 86
        gspH NONE
HR116_RS06075 1355379 .. 1355428 - -10.8  -3.17054   CAGGAAACCATCGAA CTGCTCGGCGGC-GA-GGCCGA-GA TCA TCGCCAGCCACCCGCCGCAGAGCAG CCTGCGGGTGATGGC  64 480
HR116_RS06055 1352808 .. 1352854 - -10.1  -3.42574   CGAACTCGACGAGAA CTT-CG-GCGCCCGCCATCTGGC CGA ACCGGAAGGCGGCCGCGCGCAAG GCTGGAAGAGCTTCG  65 271
        imuA 1351506 .. 1351551 -  -5.4  -3.40403   GTTGCGGCAGGAGAA TGCAAGCCCAGAGCATGGC CGCCTCATT GCCAGGCGCTG-GCTGGCA GGGCGGTCGCCGGCG  53 3
HR116_RS06040 NONE
HR116_RS06035 1346694 .. 1346717 - -16.8  -4.13767   GCTCCTATCCCAAAA          CCCCTGGTCA GCGA TGACCAGGGG           TTTTGCTTTTGCGCG 100 343
HR116_RS06005 NONE
HR116_RS06000 1335846 .. 1335875 -  -9.9  -3.14132   GGGGTGTTCGAGGAA       GCAGTG-CGGCGCA AGG TGCGCCGGCTCAGC       GGGCTGATGCTGCAT  62 128
HR116_RS05970 NONE
        chrA 1322441 .. 1322461 -  -8.2  -2.70932   GCGCCTGTTCAACGA            CCGCACCG GGATT CGCTGCGG            CAGCCACCAGCAGCC  52 218
HR116_RS05955 1320224 .. 1320238 -  -5.6  -3.92602   CGAACATGTGAGAAA               CCGGTC AGA GACGGG               GCGGCGATTATGCCA  62 146
HR116_RS05950 1318704 .. 1318723 - -10.7  -5.86061   CGGCAGGAAAAAAAA            CGCCTGC GGACAA GCAGGCG             TTTTTTCAACCGGCG 100 48
        fppA 1314781 .. 1314801 -  -2.6  -2.53876   GTGCATTGGAATGCA           GCC-ATACC GAAT GGTATTAGC            CATAAGCATATAGTC  37 68
HR116_RS05930 1313450 .. 1313465 -  -2.4  -3.97947   CGGAGCGACGATAAA              GATCGG CAGT CCGGCC               AACATCGATCAGGTC  56 456
         flp 1304026 .. 1304053 - -14.2  -4.40173   AGCATAAAGGCAAAA        TAGTGGCGCCAT GAAA ATGGCGCCACTG         GAGGGAAATCGCTCT 100 52
HR116_RS05875 1301908 .. 1301923 - -11.8   -4.7373   CCAGGCCATGAAAAA              GGCGCC CGCG GGCGCC               TTTTTCATGGGGGCT 100 95
HR116_RS05865 1298028 .. 1298041 -  -9.5  -5.32944   TGGAGAACGAAAAAA               GCGCC CGCG GGCGC                TCTTCATCGGTAGGC 100 94
HR116_RS05860 1295880 .. 1295910 - -24.2  -3.40522   ATCCTGGCAGGATAA       GGGTGAACAACGCC GTT GGCGTTGTTCACCC       TACGAATGGCCGGGG 100 99
HR116_RS05855 1294534 .. 1294566 -  -2.6  -3.02144   CCACGTCGTGCAACA     CCAGCAGCA-GGCTG CGTT CAGCCATAGCGCGGG      AACCTCGCCTCGCTG  41 10
HR116_RS05850 NONE
HR116_RS05845 1292482 .. 1292514 -  -4.7  -4.60889   AAGGATGTGGAAAAA      CTGGTGCTCGCGC GCGGACT GCGCTATCACCTG      GAAGACCGCGTACTG  75 310
HR116_RS05830 1291037 .. 1291055 - -11.7  -4.98531   GGCGGAAATGAAAAA             CGCCAGC ACTGG GCTGGCG             TTCTTCGTGGAACTG 100 47
HR116_RS05820 1288558 .. 1288579 - -15.1  -3.09516   GGCGTCATCAGGCAA           CCGGGCCGC CGCG ACGGCCCGG            TCTGCACCTCAGTTG  81 34
HR116_RS05815 NONE
HR116_RS05810 NONE
HR116_RS05805 1285202 .. 1285236 -  -2.7  -2.54687   GCAAGCAGCAGGAAG    CGCGCGCGCC-GGCTCA TCA TG-GCTTGGCTCCCGCG    GCGAAAAGGCTGCGC  38 7
HR116_RS05800 NONE
HR116_RS05795 NONE
HR116_RS05790 1281328 .. 1281346 - -10.3  -3.37796   TCGTATCACCGATAA             GCCGATG GGCTA CATCGGC             AACGTCTCCGAGGAC  65 297
HR116_RS05770 1279343 .. 1279360 -    -4  -2.63596   TGCCATTGCAGACCA             GGCGCC GCGACG GGCGCT              TGATCTGGGTCAGTC  41 50
HR116_RS05765 1278324 .. 1278349 -  -3.9  -3.29144   GGACTCCTTGGATAA         CGCTGGCGTGCA GGC TAC-CACCGGCG         AGGCTCGGCGGCGAC  48 62
         pyk 1276635 .. 1276663 - -17.5  -2.72144   TGAGGCGTCTGAAAT        GGCGGATAACCGC GTG GCGGTTATTCGCC        TTACACCACGTTGGG  84 214
HR116_RS05740 1271759 .. 1271777 - -13.1  -4.72272   TGGCCGTACGAAAAA             GCCCGGC GCGGG GCCGGGC             TTTTTCAGGGACGGA 100 47
HR116_RS05655 1255436 .. 1255452 -  -2.1  -2.78463   AGCCGCGCCATCAGA              CCGCTGC CTT GAAGTGG              CGGGCGTAGCGCGGG  39 4
HR116_RS05650 1254409 .. 1254443 -  -4.2  -3.21695   CCAGGAGGAACTCAA    GGCCAACGTCG-AGC TGCGCG ACTACGTCGCCGGCC     TGGGGCTGGGCCGCG  47 237
HR116_RS05635 1252562 .. 1252573 -  -2.2  -3.29273   GCGAGGACGAGAAGA                GACG CCGG CATC                 GGTCGAGCTCCTGGA  45 73
HR116_RS05630 NONE
HR116_RS05625 1250272 .. 1250300 - -21.8  -3.01001   GACGGGCAAAGCACA        GAGCCCGCCACG GCAAG CGTGGCGGGCTC        TTCCTGGCTGGCGCG 100 42
HR116_RS05600 1245770 .. 1245781 -  -3.6   -3.2614   CACCCTGGACATCAA                CCGC GCCC GCGA                 ATACCTCGACTACGA  47 108
HR116_RS05590 1243357 .. 1243370 -  -8.1  -2.70932   CCGCTTTCTCAAGGA               CCTCG GCGT CGAGG                GCGGTTTCATCCACC  51 286
HR116_RS05580 NONE
HR116_RS05575 1241620 .. 1241634 -  -2.7   -4.2074   TCGGGAAGACAGAAA               CCGCG TTATC CCCGG               AACAGCAGTTGCGCG  59 16
        sodB 1240650 .. 1240681 - -23.2  -4.35116   GACCGCAGATTAAAA      CGAAAAAGCCCGGC GAAT GCCGGGCTTTTTCG       TGGTTCTGATCAGAC 100 41
HR116_RS05565 1238277 .. 1238321 -  -7.7  -2.71731   GGCATCGGGCAAGCA GCGCC-GCGCCGACCCGCCA CCGGCT CGGCAAGCCGGGGGAGGCGC ATCCCTTCATTCTCT  51 157
HR116_RS05550 1235397 .. 1235427 - -16.8  -3.54424   TTCGAGGCCCTGAAA       CGCAGCGTGCGGCC ATG GGCCGCACGCTGTT       GGCGCAGGAAGGAAT  91 40
HR116_RS05545 1233848 .. 1233860 -  -3.3  -3.01712   GTCGTGGGCGGAACA                TGTGG GCT CCTCA                GAGTGAATTCAGGAA  43 23
HR116_RS05540 NONE
HR116_RS05535 NONE
        mexV NONE
        mexW NONE
        pncB 1225831 .. 1225848 - -14.1  -4.56597   CTCCTTGTCGAAAAA             GCCCCGC CTTG GCGGGGC              TTTTTCATGGGCGAT 100 115
HR116_RS05490 1220951 .. 1220961 -  -8.2  -3.01712   CTGGCTGCTGGAAGA                 GGCG CGC CGCC                 TGGGCGTGCGCGGTG  57 204
HR116_RS05475 1219521 .. 1219538 - -14.1  -4.07568   CCTGTGGTTGGAAAA             GCCCCGC TTCG GCGGGGC              TTTTTTATTCCTCAG  90 37
HR116_RS05450 1215133 .. 1215150 - -14.1  -4.72272   GGCCTGCACGAAAAA             GCCCCGC GATA GCGGGGC              TTTTTCCTTGCGGGG 100 48
HR116_RS05435 NONE
HR116_RS05430 1210749 .. 1210766 - -14.1   -4.7497   GCGATCCACGAAAAA             GGCCGGC GAAT GCCGGCC              TTTTTCATTCTCGCC 100 41
HR116_RS05415 NONE
HR116_RS05410 NONE
HR116_RS05405 NONE
HR116_RS05400 1204246 .. 1204261 - -10.4   -5.5604   GGAATGAAGAAAAAA              GGAGGC TTCG GCCTCC               TTTTTTCGTCTCGAT 100 60
HR116_RS05370 1196446 .. 1196501 -  -6.8  -3.40403   CGTGGTCGACGAGAA CCGCGTGCTCAACGAAGACGGCCTGCG TTA CG-AGGACGAGTTCGTCAAGCACAAGA TCCTGGATGCCATCG  56 283
HR116_RS05275 1175457 .. 1175475 - -10.2  -4.09685   CCCTATCGGTCAAAA             GCTGCTGG TCC CCAGCGGC             TGGACCTGGCCATTG  78 1
HR116_RS05270 NONE
HR116_RS05265 NONE
HR116_RS05260 1173842 .. 1173859 - -11.3  -4.90266   GCGAGCAATGAAAAA             GGCGATC GAAG GATCGCC              TTTTTTTCGTTCGCT 100 46
HR116_RS05220 1167694 .. 1167706 -  -6.9  -2.71731   GGGAGGGGCGAACGA                CCGCA TCG CGCGG                TTGTCCGCCGAACCC  49 66
HR116_RS05210 1165320 .. 1165350 -  -4.6  -3.64703   GGTTCTGTAGGGAAA      GCGCCGGCGCCGA TGCCGT TCGG-GCAGGCCC       GGCGATGTCCGGCTC  55 39
HR116_RS05205 1164199 .. 1164219 - -16.9  -4.13654   GGCGGAAACGAGAAA            GGGGTTGCC GAT GGCAACCCC            TTTTTTCATGGGCGC 100 49
HR116_RS05185 1160303 .. 1160320 - -14.1   -4.7497   CGCAGCCATGAAAAA             GCCCCGC GGAT GCGGGGC              TTTTTCATGGGCGTC 100 60
        mltB 1155590 .. 1155604 -  -3.4  -3.62046   GGAGGTGGGCAACAA               CGTGCA GCT CGCCCG               GCAGCTCGGCTTCGA  49 424
HR116_RS05160 1153938 .. 1153955 - -14.1  -4.36931   CAAGTGATACGAAAA             CGGCGCC CGAG GGCGCCG              TTTTCAATGGCGGGG 100 42
HR116_RS05105 NONE
HR116_RS05100 NONE
        lptC NONE
        lptA NONE
        lptB 1142245 .. 1142290 -    -9  -3.10244   GCTCTGAATAAATCA TCCGCTC-CAGGCGGCACTCGC GGTT GCGAA-ACCGCGGGCGAGCGGA ACCGCTCCGGCGAGG  60 66
HR116_RS05080 1140579 .. 1140589 -  -2.4  -3.16564   GTGGCAGGTTAGCAA                 CCTG CCT CCGG                 AACACCTTGGCGTGG  43 48
        raiA 1140229 .. 1140247 -  -2.3  -2.63596   GGGGAGGGGAGATCA            GC-GGGCG CCTA CGCCTTGC             TGCCGTTCGAGATAC  38 4
        ptsN NONE
        rapZ NONE
HR116_RS05060 1138544 .. 1138559 - -11.8  -4.54727   CGCCGGAAAGGAAAA              GCCGCC AGTT GGCGGC               TTTTTCGCTGTCGCT 100 50
HR116_RS05025 1132550 .. 1132570 -  -8.9  -3.53012   GCCGGCGCGGCGAAA            CCTAGCGCA GGC CGCGCTTGG            TTTCGTCCAGTTCGC  63 6
        gatC NONE
        gatA NONE
        gatB 1117963 .. 1117984 - -17.3  -3.78934   CCTGGCGGACAAGAA           GACGCCGGG CGAA CCCGGCGTC            TGGCTTTGACTCACG 100 36
HR116_RS04965 NONE
HR116_RS04960 1116971 .. 1116985 -  -8.6  -4.05714   ACGCCGAACGAGAAA               CAGGAA ACC TTCCTG               GTGCCGATGCGCAAG  72 180
HR116_RS04915 1103720 .. 1103751 - -18.8  -3.66139   GAGAGACAGTGGAAA      CGCAAGAGGCAGCC CGGA GGCTGCCTCTTGTG       GTGCGCGCCGACCGG 100 42
HR116_RS04910 NONE
HR116_RS04905 1100159 .. 1100203 - -25.7   -3.9461   CCGGCCGAACAATAA CGCCGCACGCGGGAAGGCAAG GAC CAGGGCTTCCCGCGTGCGGCG CAGCGATCAGTCCAG 100 32
HR116_RS04895 NONE
HR116_RS04890 1096192 .. 1096231 -   -17  -3.01712   CGCGGCGGTCGAATA  CGGCGAGGCGAGCGCTCC TGGC GGAACGCGCGCAGCGCCG   TTCTGGAACACGGGC  88 120
HR116_RS04885 NONE
HR116_RS04880 NONE
HR116_RS04875 NONE
HR116_RS04870 NONE
HR116_RS04865 NONE
HR116_RS04860 NONE
HR116_RS04850 1087627 .. 1087682 -  -3.8  -3.53012   CGCGCCTGGCGCAAA GCCCCGC-GCATAGCGAGGTAACCTTC GTC GAGAGCGACCTGGCGACGCAGCAGGCC GATCTGCTGCGCTTC  51 66
        lpxO 1083940 .. 1083955 - -10.4  -4.90266   CGGATGAATGAAAAA              GGCTCC CAAG GGAGCC               TTTTCGTTGCCAACT 100 404
HR116_RS04815 NONE
HR116_RS04810 NONE
HR116_RS04805 1075179 .. 1075197 - -17.4  -4.67353   CTACGGATGGAAAAA             CGCCCCGC TCG GCGGGGCG             CATTCCTTGGCGGCG 100 42
HR116_RS04770 1065804 .. 1065821 - -14.1  -5.07486   CAGTCGCAATAAAAA             GCCCCGC TTCG GCGGGGC              TTTTTATTACCTGCG 100 47
        pilB NONE
HR116_RS04745 NONE
        pilD NONE
HR116_RS04735 NONE
        yacG 1058863 .. 1058887 - -18.6  -3.33696   GCGTCCCTGAAGGAA          CGGGCCAGCC GGATT GGCTGGCCCG          TTGCGTTCAATGCTC  93 32
HR116_RS04705 NONE
HR116_RS04700 NONE
HR116_RS04695 NONE
HR116_RS04690 1054155 .. 1054181 -  -8.7  -3.33696   TCGCTGTTGAAGGAA        CGCCCCG-C-GCC GAC GGCAAACGGGGCG        TAATGGCTCAGTGCA  60 33
HR116_RS04680 1050879 .. 1050891 -  -3.3  -2.57344   GAGCTTGCTCAGAAG                TAGCG GGT CGCTT                GCAACCACAGCCGGG  39 6
       tpsA4 1046357 .. 1046376 - -13.6  -4.88228   ATTCAAGACGAAAAA            GCCCACCT GCGA AGGTGGGC             TTTTTCGTTTCTGTA 100 219
HR116_RS04640 1040242 .. 1040265 - -16.8  -4.56597   GGCGGCGGGCAAAAA          GAAGGGAGGC CTGC GCCTCCCTTC           GGTGTTTCGTGCGAT 100 40
HR116_RS04635 NONE
HR116_RS04630 NONE
HR116_RS04625 1036915 .. 1036934 - -13.6  -4.68645   GAGCGAAAACCAAAA            GGCCTGTC TTCG GACAGGCC             TTTTCACTTTCAGTC 100 35
HR116_RS04615 1035087 .. 1035103 -  -3.6  -2.72511   TCTACGCCTGGAAAG              CATGCC AAACG GGCCTG              GGAGCGTCTTGCGGT  40 82
HR116_RS04610 NONE
        pilV NONE
        pilW NONE
        pilX NONE
       pilY1 NONE
       pilY2 NONE
        pilE 1028291 .. 1028313 - -17.8  -4.63218   CCGTGCGCAATAAAA           GAGCCCCTCT CGT AGAGGGGCTC           TTTCGTTTCAGCGCC 100 33
        rpsT 1020283 .. 1020297 - -12.8   -5.4505   GTGGGCAATAAAAAA               CCGGCC ATT GGCCGG               TTTTTTATTCGAGCA 100 50
HR116_RS04515 1015383 .. 1015404 - -17.3  -4.67038   GTCGCAAAACGAAAA           CGCCGCCGT GAAA ACGGCGGCG            TTCGTCACAAGTCGA 100 48
HR116_RS04510 1014944 .. 1014975 - -16.7  -2.69042   ACATGAGGAAAGTGA      CTCCGGGAAGGTC GTCCGT GACCTTCCCGGAA       CCGGCCGGAGGCGCC  81 115
HR116_RS04505 1012654 .. 1012679 - -20.5  -3.72241   CAGGAAGGAGCGAAA         CGCCCCGTCGA CGCA TCGACGGGGCG          TTTTTCATTGCGGCA 100 41
HR116_RS04470 1006573 .. 1006600 - -12.6  -3.53761   TAATGCTTGGGGAAA        GGGGCCTGCCCG CGAA CGGGCAGGCGGC         GAGGCTCAGGCCTGC  76 31
HR116_RS04465 1004258 .. 1004268 -  -6.8  -3.03338   ACAAGGTCGGCAAGA                 GCTG TTT CAGC                 CAGTGGTACGAGGCT  51 448
HR116_RS04450 1001938 .. 1001950 -  -3.4  -2.62184   GTCCTGTCCATACGA                TCGA TTCCC TCGA                TCCCCGGCCTGCCTT  39 178
HR116_RS04445 NONE
HR116_RS04440 NONE
HR116_RS04435 NONE
HR116_RS04430  997445 ..  997462 -  -5.5  -2.55813   ACGCGAAGAAGACAT             GGCCG-GG ACT CCTCGACC             GCCGGGATGGGGCTC  46 109
HR116_RS04425  997025 ..  997045 -    -9  -3.15544   CTTGACGTGGATCAA           GC-GCACCG GGAT CGGTGCTGC            GGATGGTTGTCGCAG  61 47
HR116_RS04420  995866 ..  995886 - -18.3  -4.84527   CCCATAGAGGAAAAA            CGGGGCTCC AGG GGAGCCCCG            TTTTTCCTTGTGGCG 100 42
HR116_RS04375 NONE
HR116_RS04370  983382 ..  983394 -  -4.7  -3.65812   GCGTCGCGAAGAGAA                GGCCC TGC GCGCC                CTGGCGAACAGCAGC  55 307
        nfxB  977110 ..  977122 -  -4.7  -2.78596   CATGCGGCGACGAGA                GGGGC GCC GCCGC                GGGCGCGAGGGTCAG  44 37
HR116_RS04345  972615 ..  972634 - -12.1  -3.29144   TCATGTCGCGGATAA            GCGGCGC TCAAGC GCGCCGC             ACGGCGGCTCAGCCC  72 34
HR116_RS04340  971228 ..  971245 - -14.1  -5.01811   GGAGGAAATGAAAAA             GCCCGGC ATTT GCCGGGC              TCTTTCGTCTTGCCT 100 47
HR116_RS04310  965601 ..  965642 - -10.1  -3.40403   GGGCCTCGACCAGAA CCGCC-TGGCGATGCTGC TGGCGGT GCTGCACCGGCACGGCGG TATCCCGACCTACGA  65 363
HR116_RS04300  964021 ..  964061 - -21.3  -3.42699   ATTCATTCACGACAA  CGGCATGAAAAAGGGCGCC TCC GGCGCCCTTTTTCATGTGG  GCATGCTCAGAAGGC 100 32
        mscL  960551 ..  960566 - -11.8   -4.8622   TCCGGCAATGAAAAA              GGGCCC GTTC GGGCCC               TTTTTCATTGTTCCG 100 50
HR116_RS04260  956860 ..  956872 - -10.5  -3.13403   CGGCGGCGAGGAACA                GCCCG GCC CGGGC                CATCGCCGTCCTGCT  62 306
HR116_RS04230  949340 ..  949358 - -13.1    -4.386   CAAGGTGCGAGAAAA             GCCCGGC TCGAT GCCGGGC             TTTCTTATTGCCGAG  95 134
HR116_RS04210 NONE
HR116_RS04205 NONE
HR116_RS04200  936829 ..  936878 - -20.9  -2.77899   CGGGTCGACCAATCA CCATGACACGCGCCATCTG-CCCG CCC CGGGTCAGATCGTGCGTGTCATAG GTCTTGTCAAACCCT  91 297
HR116_RS04195 NONE
HR116_RS04190  935363 ..  935402 - -16.4  -3.62591   GGCACAACCTGGAAA  TGGCCGACCTGACCCGGCG CAT CGCCGAG-CTGCTCGGCCA  GCCTGCGCCGCAGCC  88 282
HR116_RS04175  931324 ..  931358 -  -9.1  -3.64049   TCAACAAGCCTGAAA     CCGACGGGCCGGAGT GCCTG ACCCCGGCCTGACGC     TAGACCCTGAACTGA  68 25
HR116_RS04165  929535 ..  929565 -  -5.9  -3.28924   GATCCTCGCCTACAA       CGCCGCCGCCCCG TTGGC CGAGGAGCCGCCG       GAGCCCTGCGGCCCC  53 71
HR116_RS04150  927870 ..  927886 - -15.1  -3.35679   TTGCCCGATGGAGAA              GCCCGGC GGC GCCGGGC              TTTCGTCTTCAGGAT  84 34
         mqo  923963 ..  923978 - -11.8  -5.04601   TCCACAAATGAAAAA              GCCGCC CGAA GGCGGC               TTGTTCCGTAGCGCG 100 43
         upp NONE
HR116_RS04095  919180 ..  919207 -  -9.9  -4.07568   GTGGCGGGTGGAAAA        TGGACGGAACA GCGAAG TGTTCCGTCCG         TTGTTTTCAGTGTGA  78 32
HR116_RS04090 NONE
HR116_RS04085  917747 ..  917769 -  -4.1  -3.14527   GAAGCGGCAGGAATA           GACGCCG GCTGGACAT CGGCATC           ACCAACTGATGGTCA  47 24
HR116_RS04080 NONE
HR116_RS04075 NONE
HR116_RS04070 NONE
HR116_RS04065  912700 ..  912712 -  -6.2  -3.28712   TCCGCTGCTGGACAA                CGCC AATTG GGCG                GCGGCGCTGATGGCG  53 399
HR116_RS04045 NONE
HR116_RS04040 NONE
HR116_RS04035 NONE
        phrB  904531 ..  904547 - -10.8  -5.02074   GCACGGGCGAAAAAA              GCCGGG TTCAT CCCGGC              TTTTTCATGCCTGCG 100 116
HR116_RS03995 NONE
        lolB NONE
        ispE NONE
HR116_RS03980  895621 ..  895631 -  -2.4   -2.5564   CAGAAGAGGAAAATG                 GCAG GGG CGGC                 TGGATTCGAACCAAC  38 13
HR116_RS03975  894522 ..  894566 - -12.4  -4.59773   GTGTATCTCCAAAAA TAACAATGCGCCCGAACGCTTG CGA CCAGCGTTCGGGCG-ATT-TCA AAGGCCCCGCCGGAG 100 81
HR116_RS03970  893874 ..  893902 -  -2.4  -4.82901   CCCTCTCTATAAAAA       GGCGATCGAGTAA TGAA TTACTCGG-CGGC        GCCTTCTTCGCTACC  74 14
         pth NONE
        ychF  892082 ..  892102 - -15.4  -4.21194   GGGCAGGAGCGAAAA            GCCCCGGC GCTTG GCCGGGGC            TTTCCTGGGACGGGA 100 47
HR116_RS03955  891838 ..  891859 - -14.5  -5.83211   GACCAAAACAAAAAA           GGGGTTAGC TTGC GCTAACCCC            TTGAAAAATATGGTG 100 36
HR116_RS03940  888360 ..  888381 -  -7.2  -3.30441   CAGCATCGTCCAGAA           CGCCTGGC ACCGCG GCCAGTCG            CTGTCCGTGCATGGC  54 221
HR116_RS03895 NONE
HR116_RS03890 NONE
HR116_RS03885  876362 ..  876391 - -15.8  -4.13767   GGGCCTATCGGAAAA       GTCCACGGCCCTG TCAGG CAGGGCCGTGG-C       AGACGCTTCACGCCG 100 33
HR116_RS03880  875224 ..  875282 -  -6.6  -3.38272   CAGGAGCAGCCAGAA TG-GCGTTCGCCGGCGCGA-GCCCGTGCG CAGG CGCACGGGCGTGGAGGCGGCGC-CGATCA ATTCAGGCCAACGTC  55 23
HR116_RS03875  873663 ..  873686 - -16.8  -4.86385   ACCGGCAAAAAGAAA          CGCCGCTTAC CTGG GTAAGCGGCG           TTTTCGTTCATGCCT 100 60
HR116_RS03795  857157 ..  857185 - -17.6  -3.72695   AGCTTCGGCAGTAAA        GAAAAACCCGGC TACAG GCCGGGTTTTTC        TTTGCTTCAAGCAAG 100 89
HR116_RS03775  851866 ..  851914 - -17.5  -3.54475   GCCGTGAGTATAGAA GAGCAGCGGCATGGCGCCCGCCC TGGAG GGGCGGGCGCCATG--GCAGTTC GTTCAGAGACCGGGC 100 28
HR116_RS03770 NONE
HR116_RS03765  850918 ..  850930 -  -5.5   -3.1994   GAGAGGAGGTACGAA                CGTCC ACG AGACG                ATAGGTGGGCGCCCG  51 75
HR116_RS03760  849881 ..  849901 - -16.9  -5.47218   TCGCAGGCAAAAAAA            GACCCGGCA AAG TGCCGGGTC            AAAAACCGTGATTAG 100 202
HR116_RS03730  842413 ..  842433 - -16.1  -3.64703   CCTGTGGCATGGAAA            GCGCCCGGC ATG GCCAGGCGC            TGGGTATGGGGGCAC  91 65
HR116_RS03725 NONE
HR116_RS03720  840945 ..  840959 -  -4.2  -2.52464   CCGGTGTCGAACTGA               CCGCTG GGG CAACAG               GCCCGAGGAGAAAGG  41 496
HR116_RS03710  840247 ..  840272 - -17.7  -4.93365   TGCTACAAGGAAAAA         CGCCGTTTTCC CTGG GGAAAACGGCG          TTTTCGTTAGCGTCC 100 32
HR116_RS03700 NONE
HR116_RS03695  836966 ..  836987 - -13.7  -2.52464   TGCGCTGGGAAGCCA           GCCGGGGCGC TAA GCGCCC-GGC           TGGCGGCGAGGCTCA  71 38
HR116_RS03685 NONE
        trmA  833399 ..  833410 -  -7.2  -3.72576   TGGGCTTCGACGAAA                CCGC CGTG GCGG                 CCTTTCCCGACGCGG  61 320
        dksA  831125 ..  831144 - -16.4  -4.06055   ACGGCGGAAACGAAA            CGGGGCGC CTTG GCGCCCCG             TCGGTCCGGCTCAGG 100 36
      gluQRS NONE
HR116_RS03655 NONE
HR116_RS03650 NONE
HR116_RS03645  825493 ..  825519 - -10.9    -5.626   GAGGGCACAAAAAAA        CCGGGTTC-CCG TTAC CGATGAACCCGG         TTTCTGTTACGCGGT 100 68
HR116_RS03640 NONE
        folK  822733 ..  822760 - -11.2  -3.06315   GTAACAGTGTGAAGA        GCCCGCCGCGAGG TAT CCGCGCAGCGG-C        GGGCAGGCAGGGTCA  66 38
        panB NONE
HR116_RS03625 NONE
HR116_RS03620  820363 ..  820380 -  -9.8  -4.87626   TTTGAACATGAAAAA             GCCCGG ATGAAA CCGGGC              TTTATCCAGAGGGGG 100 46
         pgi  818612 ..  818630 - -17.4  -4.88407   GGACGGAATGAAAAA             GCCCGGCC TAG GGCCGGGC             TTTGGGGAGAGGCGG 100 42
         acs  816472 ..  816511 - -15.1  -2.87344   CAGGCGCCGGAGAGA CTGGAACCGTCCCG-CGCC GCAG GGCGGCGGGACGGTTGC-G  CGGGTCAGCGGTTGA  79 30
HR116_RS03605 NONE
HR116_RS03600 NONE
HR116_RS03595 NONE
HR116_RS03590  811492 ..  811517 - -23.3  -4.10791   AACAGGTAGAAAGAA         GCCCCGCCGGG ATTG CCCGGCGGGGC          TTTTTCATGGGCGCT 100 45
        yhbY  795020 ..  795039 - -13.6  -2.72227   AATACGTCTGAACCA            GGTCGGGA AGTT TCCCGACC             TTGGTTGGATGGGAC  72 42
        recN  782338 ..  782357 - -11.4  -4.13767   GGTTCCATGCGAAAA            CGGCGACCC TGG GGG-CGCCG            TTTTCATTTTCCATT  84 51
HR116_RS03440  781242 ..  781259 - -14.1  -4.98531   TGCGGAAATGAAAAA             GCCCGGC GAAT GCCGGGC              TTTTTCGTGGAACGC 100 47
        smpB  779667 ..  779679 -  -9.1  -3.21099   GGCGCGCAGGATGAA                GCGCT CGC AGCGC                CGTCGCAGCGTGCAG  61 72
HR116_RS03415  776828 ..  776875 - -16.2  -3.56643   GGGACACGGCGGAAA TGGCCAAGGGAGCCGGGCCTAC GATC GTAGGCGAGCCTCCCCGGGCCA TTTCCTGCGCAGTAT  91 69
        lldD NONE
HR116_RS03405  772667 ..  772679 - -10.5  -3.04461   GACGTAGGGCGAATA                GCGCC AGC GGCGC                TATCCGCCGCTTCTG  62 82
        speD NONE
HR116_RS03395 NONE
HR116_RS03390 NONE
HR116_RS03385 NONE
        pmrB NONE
        cueR  767184 ..  767201 -  -9.1  -2.76696   TGGTCGGTGAAGAAC             CAGGCGC GCAT GCACCTG              CGCAACGGCGACCGG  55 264
HR116_RS03340  761738 ..  761748 -  -8.2  -3.28712   CGCTGCGGCGGATAA                 CGCC GTT GGCG                 TTATGCGCCCTACCG  60 105
HR116_RS03330  758554 ..  758564 -  -8.2  -3.49475   TGCAGGGCCAGATAA                 CGCC GTT GGCG                 TTATCCGCCCTACCG  63 77
HR116_RS03320  756332 ..  756370 - -13.1  -2.70932   CGGTGGCGGTAAGCA   GCCGCATAGCTTCGGGC TTTGC GCCCGAAGCTTCAAGGC   ATGGCGGACCGGCGT  68 40
HR116_RS03315 NONE
HR116_RS03310 NONE
HR116_RS03305  754232 ..  754244 -  -6.9  -3.59262   CGCGACAGTTCGAAA                GCCGC GAT GCGAC                GCGCAACCGCCTGGT  58 347
HR116_RS03295 NONE
HR116_RS03290 NONE
HR116_RS03285 NONE
HR116_RS03280  751581 ..  751591 -  -8.2  -3.63515   GGGTAGGGCGAATAA                 CGCC AGC GGCG                 TTATCCGCCTTCCGC  65 70
HR116_RS03275  750425 ..  750455 -  -6.6  -2.91274   CCGACGGCAACTACA       GCGCCGTCCGCGAG TTG CTCTGGGGCCGCGC       CACCCACGTGGTATG  48 361
HR116_RS03255  747590 ..  747609 -  -3.6  -4.25104   CCGTCTCGAGGAAAA            CCTCTT GCAAATCA AAGAGG             AAGGCAATCACGCCC  65 160
HR116_RS03230  742638 ..  742669 -  -6.4  -3.21099   CTGCGCCAGGATGAA      GCCGTCATGCGCAA CCTG CTGCGCAAGCTGGC       ACGCCTGGGCCAGTT  51 303
HR116_RS03190  730019 ..  730037 -    -3  -4.30576   GGCGGAGGAGGAAAA             CGCGAGAC CCC ATCGCACG             CCCTCGGATTCCGCC  64 104
HR116_RS03185  729296 ..  729310 -  -2.8  -4.12198   GAGAATGCGGGAAAA               GGACAT ACG ATCTCC               TCTGCAGCCTTGTCC  61 173
HR116_RS03180 NONE
HR116_RS03175  727320 ..  727357 -  -5.4  -3.40403   GCGCGCCGAGCAGAA   GTCCACCGCCG-CGCTG CTGGC CAGCGACGCCGGCTGGC   GCGAGCGGCCGCTGG  53 264
HR116_RS03155  722923 ..  722951 -  -8.7  -2.73483   ACGCCATTTCAAGGA        CGCCGAACGCCTG CGC CTGGCGCTCGACC        AGTGCCACGGCCTGC  52 303
HR116_RS03115  714726 ..  714753 -  -5.5  -3.14527   CAAGGCCGAGGAAGA        GGCGATCGTCT GCATCG AGCGGATCGCC         GGGCATGCGGCGGAG  49 423
HR116_RS03105  712986 ..  713003 -  -2.7  -2.53015   ATACCTTGGAATGCA             GGTCGTCA TCT TAACG-CC             TGGCGGCCTTCCCTG  37 53
HR116_RS03100  711891 ..  711929 -  -5.9  -3.14132   CGGCGTGGCGATGAA  CGGTCCG-CTGGCCGATG CCGA CATGGACCGGGCGGAGCG   GATGATCGCCCTCAA  51 499
HR116_RS03090  710702 ..  710754 -  -5.5  -3.71848   GTCGCGGACGAAGAA GGGCTGAGCCTCCGGCGCG-ACCAGC TCCC GCTGCTTCGCGCCGGAC-CGC-GCCT AGAGTACGTAGCGCC  60 24
HR116_RS03065  704127 ..  704157 - -25.4  -3.13908   AAGCGAACCAGGCAA       TGGCCGGCGGGCGC GAG GCGCCCGCCGGCCG       TTTCGTTTCCGTTGT 100 199
HR116_RS03040  697708 ..  697718 -  -4.6  -3.09516   CGTCCGACTACGGAA                 CGGC GAG ACCG                 CAGGTTATTTCCGTT  47 68
HR116_RS03035  695591 ..  695631 -  -9.7  -3.65313   GAATGATAGCGGAAA GCCGGGCCCGATCGAGCC CCGTGC GGCT-GATCAGGTCCTGC  CCCGGTTCCGCTGAG  68 104
HR116_RS03030  693664 ..  693684 -    -4  -3.56643   TGTACAGGCTGCAAA           CGGCA-AGC GGGC ACTATGCCG            GAATTTCCGTATGAC  53 116
        aroQ NONE
HR116_RS03020  692676 ..  692692 -  -5.7  -3.02144   GCACTTTTTCCAACA              TCGCAGG TTC CCCGCGG              CTTAGACGATGGTGA  49 27
        accC  691280 ..  691312 - -16.4  -3.57144   GCCGGCAGGCGGAAA     CG-ACAAGGGCCGCC CGGA GGCAGCCCTTGTGCG      CAGCGACTGACGGAT  91 40
HR116_RS03010  690301 ..  690322 - -15.1  -4.05788   CGGCTGTAAACGAAA           CGGGCCGCC CAGG GGCGACCCG            TTTTCCACCGCGCAA  95 53
        prmA  689389 ..  689407 -  -2.3  -3.14564   GCAGCGCGCCATCAA            TCGG-CGC GGCG GCGGCCGC             TGATGCGGATCCAGC  43 3
HR116_RS03000  687842 ..  687862 -  -3.1  -5.00616   GGTGCTGCGAAAAAA            GGGAGGGCA TGA TACCCGCTC            TGGATGACCGGATAA  78 175
        dusB NONE
         fis NONE
        purH  684816 ..  684827 -  -5.8   -3.5774   ACTCAATGGCGGAAA                TGGC GCAT GCCA                 GTGAACACCATCGCG  57 1
        purD  683343 ..  683358 -  -4.6  -2.78715   AATGGCCGGATTATA              GCCAAG TGGC CGTGGC               AACGGCATAGGCCGC  44 77
HR116_RS02975  680360 ..  680370 -  -8.2  -3.28924   GATGTCGGCGGATAA                 CGCC GTT GGCG                 TCATGCGCCCTACGT  60 133
HR116_RS02970  679396 ..  679411 -    -6  -4.07687   ATCGGTCGGCGAAAA              GGCGCC GCGA GTCGCC               GGGGAAGCATGCCGA  65 255
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
HR116_RS02940 NONE
HR116_RS02935 NONE
HR116_RS02930 NONE
HR116_RS02925 NONE
HR116_RS02920 NONE
        ureC  669097 ..  669133 -   -13  -2.52543   AGCTGTCCGAACGGA   GCGGTCGACGTCCCGGCG TGG CGCCGGGAC-CCGTC-GC   GTGGGAATCAGAACA  67 33
HR116_RS02910  667420 ..  667435 -  -4.7  -3.13403   TGCGGTGCAGGAACA              GATCG ACAGCA CGATC               GAGGATGCCATCGCT  47 245
HR116_RS02900  666618 ..  666630 -  -9.1  -2.59742   GCCAATGCGCAGAAG                GTCGC AGG GCGAC                AGTCTGGTTCAGGAT  56 34
HR116_RS02890  664074 ..  664084 -  -8.2  -3.28712   TGTGGCGGCGGATAA                 CGCC TGT GGCG                 CTATCCGCCCTGCGG  60 152
HR116_RS02880 NONE
        osmE  662455 ..  662486 - -23.8  -2.52464   CCGGGCCTGAACGCA      GACGCCCCGCCTCC GTAA GGAAGCGGGGCGTC       GAGCCGTCAGGGGCG 100 32
        brlR  661018 ..  661051 -  -8.1  -3.46848   CAAAAGCGACGACAA     CCAGTGCACCGCGCTG CTG CAGCGCA-TGCGCTTG     CCAGCCAAGGTGCCG  59 57
HR116_RS02855  658135 ..  658155 - -15.4  -5.10163   AAGGCGAAAAGAAAA            GCCGGCGC TGCGG GCGCCGGC            TCTCGGACGGGTCTT 100 50
HR116_RS02850  657576 ..  657608 -   -12  -4.15006   ACAGGGATGGGAAAA      TAGGAAAGCCCGGC ATCGA GCCGGGCTTTTCTC      GCGCCTTGCGGCGTA  86 49
HR116_RS02830 NONE
HR116_RS02825  653261 ..  653280 -  -7.8  -3.86015   GACGCCGGCGAGAAA            CCCGCTCA GTCC TGAGCCGG             GAACGCCAGGTCGAA  68 11
HR116_RS02805  648630 ..  648658 -  -5.1  -3.95554   GGATGTAACAAAATA        TTGCAGCGCGCCA GGT TGGTGCGCAACGA        CTTTTTTGCCGCACC  60 109
        ureE NONE
HR116_RS02795 NONE
        ureG NONE
HR116_RS02785  645904 ..  645916 -  -9.1  -2.78384   TGGTGGCCGACGACA                TGCCG CTG CGGCA                GTGGGCGGGAGAACT  55 223
HR116_RS02770  640995 ..  641011 -  -7.9  -3.16921   ACCAACGCCGACGAA              CGCTCCT GGC AGGTGCG              CTACGACTACGATTT  54 426
HR116_RS02745 NONE
HR116_RS02735 NONE
HR116_RS02730  630261 ..  630302 -  -9.9  -3.14931   GCGACCCTGGAGGAA TGCCTGGCCGAGGGCGACC GATT GTTCGCCAACGGCCAGGTC  CTGCTGGAGGAGCTG  62 376
HR116_RS02685  621034 ..  621058 -  -8.5  -3.84825   CCGAGTGAGAGTAAA          GATGGTTCCGC GCA GCGGAAACGTC          AAACCGGGCCGTGGC  71 24
HR116_RS02680  619333 ..  619374 -  -7.8  -3.85698   TGGCGTCCTGACAAA CGGGTGCGGCAGGG-CCGG TGAGG CCGCTCCCTGCCGCGCTTG CTAGACGGTGAAGCG  68 26
HR116_RS02665 NONE
        pncB NONE
        nadE  615150 ..  615168 -   -16  -3.85698   CCCGCCCGCGACAAA             GGCCCGTC GAC GACGGGCC             TGCCGCACGGACCGG  95 46
HR116_RS02650  614091 ..  614108 - -14.1  -4.72272   CCGCTGCATGAAAAA             GCCCGGC CGCT GCCGGGC              TTTTTCATGGGCGCG 100 49
HR116_RS02640  612441 ..  612463 -  -3.2   -3.6968   CGACAAGCTCAACAA           GGGCATCCGC ATC GCCGGCACCC           TGGGCCAGCCGGTGC  53 316
HR116_RS02610  602264 ..  602301 -    -4  -2.70932   TGCGGCCGGGAATCA   TGCTCTACGGGTCGACC CCGCT GGCCGACCTG-AGCGCC   GCCGAACTGGGCCTG  41 429
HR116_RS02565  593989 ..  594002 -  -8.1  -5.27335   CTGCTGAAACAAAAA               CGGTC TAAT GACCG                GCTTTGTCTGAAATA 100 41
HR116_RS02560  593769 ..  593787 - -10.2  -4.77165   TCGCGGACAACAAAA             GGCCGAGC GAT GCTCGGCT             GTTTGTCTTGAAGAT 100 40
        queG  579354 ..  579364 -  -4.6  -3.64487   CGAGAGCTTCAAGAA                 GGGC AAC ACCC                 ACCTGGCGCTGGACG  55 133
        rsgA  577752 ..  577774 -  -6.2  -3.29471   GCTGGAGCAGATCAA           GGGCGACTGA GGT TCAGTAGTCC           GTTTCCGGCATGCTT  52 16
HR116_RS02470  574164 ..  574191 -  -2.5  -3.76125   GCAGTTTAACGGAAA        GCGCGCCCGAC CAGTGT GCCGGGCATGT         CCCTCATTCCGTGCG  52 29
HR116_RS02465 NONE
         psd  572394 ..  572425 - -18.1  -2.87132   GGCGGCGGGGAGAGA      CGGGACGGAGGCGC TCGGG GCGC-TCCGTCCCG      GCGAGGTCAGGACTG  90 32
HR116_RS02455  570233 ..  570243 -  -2.4  -3.65351   CGATGGCCATGGAAA                 GGGC TCA GTCC                 GCGTCCGGGCAGGCG  49 74
HR116_RS02450  568125 ..  568150 - -15.5  -4.16943   CGGTAGAGCGGAAAA         GCAACGGGCGCC CAG GGCGCCCGTT-C         TTCATTCGTCTCCCG 100 27
HR116_RS02440 NONE
HR116_RS02435  564526 ..  564543 - -14.1  -3.99324   GCCGACCAGGAGAAA             GCCCCGC CGAA GCGGGGC              TTTTTCGTTTCGGCG  90 41
HR116_RS02385  553604 ..  553626 -  -5.4  -3.38272   GATCATCACCTACAA           GATCGCCGCC CAT GCCGCCGACC           TCGCCAAGGGCCACC  53 411
        opmH  550134 ..  550165 - -20.2  -3.06796   CGCCAGGCCAGTCAA      GCGAAGACGCCCCC GACC GGGGGCGTCTTGGC       TCGTGCTAGTACTGC  93 31
HR116_RS02310 NONE
HR116_RS02305  531838 ..  531851 -  -8.1  -3.61398   GGTGCTGCGCAACAA               CCAGG GCGC CCTGG                AGCGGCTGCTGGCGG  60 121
HR116_RS02290  529249 ..  529272 -   -11  -3.75629   TATCGGGAACGGAAA          GGGCGCAG TATACAAC CTGCGCCC           GCGACGGTCGTTCAG  76 37
HR116_RS02285 NONE
HR116_RS02280  527198 ..  527217 -   -15  -2.53876   TGGCAGCGGAATGCA            CCGCGGGT GTCA ACCCGCGG             ATGTTGCAGCCGATG  74 47
HR116_RS02275  526129 ..  526146 -  -9.8   -4.0616   CAGTTGAAGTAGAAA             GGGCGG CAAAGC CCGCCC              GGTTCAGGCGCTGGC  78 29
        asnB  520757 ..  520779 - -10.4  -3.04461   GACCTACCTCGAACA           GGCGCGCGCC CAG GGCGACCGCC           TGATCGTCGGGGTCA  60 397
HR116_RS02245 NONE
HR116_RS02240  515366 ..  515401 -  -4.7  -2.72511   GTCATGCCGGGAAAG    GAG-CAGCGCAAACGC GACCT GCCTTTCCGCCGTCTC    GACTTCGATGACCTG  43 476
        aceE  494535 ..  494552 - -12.7  -3.53012   CCGGCGTGCTCGAAA             CCCCTCG CTGC CGAGGGG              AGTATGGAGCGAATT  76 39
        aceF  492695 ..  492714 -   -15  -5.40474   AGGCGGGCAAAAAAA            GCCCCACC ATCC GGTGGGGC             CGAGAGACGAGCGTG 100 89
HR116_RS02150  489628 ..  489652 -    -2  -2.91065   AGCACAGAGAGTACA         GCCT-TTCCGC GCCG GCGGGGGAGGC          CTGGGCGATCAGTGC  40 34
        msrA  488547 ..  488557 -  -2.4  -4.07568   GCCGGCGCCGGAAAA                 GCGC GCG GTGC                 TGCTGATCGATCCGC  58 388
HR116_RS02135  485938 ..  485957 - -12.1  -5.36441   CCCGGACATAAAAAA            GCCCCGG ACGTGA CCGGGGC             GGGAAAGGGCAGGCA 100 44
HR116_RS02130  483954 ..  483964 -  -2.4  -2.52986   AATCAGAGGAAAAGT                 CCGG GCC CTGG                 GCGGCCTTCCGGAAA  37 2
        mscK  480431 ..  480476 - -25.7  -3.08992   AGTGATTTCAAGAGA GGCCTCCGGCAATTCCCGAGCA TTG TGCT-GGGAATTGCCGGAGGGC GTCCAGGCCCGGAGG 100 42
HR116_RS02120  478979 ..  478989 -  -3.2  -3.23216   CGTCAGGAGGAGCAA                 CTGA TTT CCAG                 GTGCCGCCCCCAGTC  44 2
HR116_RS02115  477764 ..  477794 -  -3.9  -3.62275   ACGCAGCATGGGAAA      GCGCGCCGGGCG GGTCAATG CGCCCGG-GCAA       GGAAAAGCGTGCCTG  53 72
HR116_RS02110  476390 ..  476445 - -13.9  -2.64735   ATCCCAGCCAGACTA GCCGGCCGGCCAGGCCGGGCAAG GACCGAAACG CTCGCCCGGACTGACCGATCCGC TCAGCGTGCGGCGGC  71 26
HR116_RS02105  475875 ..  475894 -  -4.2  -3.75067   CATGGCAGAAAAAAC            CTTCGCCG GGCC CTGCGAAA             TCTGCCAGTCAGGGC  56 34
HR116_RS02100  474755 ..  474813 -  -9.6  -2.71144   CATCGTGGTCAACCA GTTCCAGCCGCGCGCCAGCCTGCCGCAGC AACT GCT-CGACGAGCTGGTG-GCGGA-GGAAC TGCCGGTGCTGCCGG  55 187
HR116_RS02085  471672 ..  471691 - -10.6  -3.05384   TCTGGTCGGAGTGAA            GGCGCCGG GAGA CCGGCGCA             TCGAACTCAGTGGGC  62 32
HR116_RS02075  469541 ..  469552 -  -5.8  -3.56273   CGCAGCAGCATAGAA                CAGC GCTT GCTG                 CGCTCAAGGGAAACG  57 29
HR116_RS02070  468397 ..  468414 - -12.7   -4.0825   GCCGGAACGAAAGAA             GGGGAGC CGAG GCTCCCC              TTTTTCATGCGCGGG  86 113
HR116_RS02010  449924 ..  449947 - -16.8  -4.82901   TCCGCCGGATAAAAA          GAAACCCCGC CTTG GCGGGGTTTC           TTTTTGCCTGCGCCT 100 83
HR116_RS01985  443534 ..  443554 -  -3.9  -3.31144   GGTCGAGGCTCAGAA            CCGCGCA TTATCCG TGGGCGG            ACAGGCGTTGCCAAC  48 127
        argS NONE
HR116_RS01975  440898 ..  440927 -    -7  -2.52464   GTGCGTCGGAACGCA       CGGCGTGGCCCGC GTTCA GCGGGCCTTGC-G       TTGCTGTAACAGCAG  48 11
        hslV NONE
        hslU  438831 ..  438843 -  -6.9  -2.98072   CGGAGTACAAGGATA                CCCCG GTT CGGGA                CCGCGCGGCCCGCCG  51 71
HR116_RS01960  438378 ..  438421 -  -5.9  -4.58395   GGCAGCGGGGAAAAA TCGCCTGGATGCCGTGTGCCGC GAA GGGGCACTCGGC--CC-GGCGC TTCAGAGCATCAGCT  76 27
        phaC NONE
        phaZ  435227 ..  435239 - -10.5  -2.52464   GTCGCGGCGAAGCCA                GGCGC CAT GCGCC                GTTGCGGAACATTGA  59 101
        phaC NONE
HR116_RS01940  432278 ..  432295 - -10.5  -5.40072   CCGCGGCGAAAAAAA             CCGCGGC GAAA ACCGCGG              CCGCCAAGCCCGCCG 100 386
        ubiE NONE
HR116_RS01915 NONE
        ubiB NONE
        hisI NONE
HR116_RS01900 NONE
HR116_RS01895 NONE
        tatB NONE
        tatC NONE
HR116_RS01880 NONE
HR116_RS01875  422443 ..  422483 -  -9.6  -3.65902   CTGATCCTACGCAAA  GGTGCCCCTCCTGTCC GCTTTCGAT GGACGGGAGGGGCTGC  CGATGCAAGGAGGAT  68 53
HR116_RS01870  421888 ..  421902 -  -9.2  -2.57344   CAGTTCTTCGACAAT               CCGCAG GAC CCGCGG               GCCCAGGCCTTCCTC  54 63
HR116_RS01830  412019 ..  412031 -  -3.3  -3.68222   CCTCAAGGGCAAGAA                CGTGG TGA CCACC                GCCGGCACCACCAAC  53 462
HR116_RS01810  408364 ..  408374 -  -6.8  -3.28924   TACTTTTCTTGATAA                 GGCT GCT AGCC                 TAGGAAGTCCGCCGG  54 525
  aac(6')-Il  383519 ..  383545 - -10.2  -3.65902   CGTAGTGGAGCCAAA         GCCATGGCAA GCTCATT CTGCCATGGC         TTTGGTGTAACGAAG  70 85
HR116_RS01715 NONE
HR116_RS01710  382170 ..  382201 - -10.8  -2.84276   ATGCCTAACGAATTA      GCT-CAGTGGGCGGC GAA GCCGTCCGCTGGAGC      GACAAGTTGGGCCGT  64 91
   aac(3)-Id  381607 ..  381657 - -14.1  -3.60792   CGTTCAACGCCCAAA CT-CAGCCG-CGGATTTGCCGTAGC GCA GCGAAGGCAAAGCCGTCGGCTGGAG TGCCTTGTTAGGCAT  81 33
HR116_RS01675  375534 ..  375576 - -11.2  -2.78384   GGGCCTCGTACCATA CCGCCGGCGCGGCGAAGCG GATATG CGGGTCGCCG-GCCAGCAG GGGCTTGCCGCTGGC  63 364
HR116_RS01625  362644 ..  362702 - -26.9   -3.1733   GTTCCGAGAAAAGGA CCGGGGCGGTTTCCCAGACAC-AGACGC CCCC GCGTTGAGTGTCTGCGAAACCGCCCCGG ATTTCGCTGCGTACG 100 77
HR116_RS01620 NONE
HR116_RS01615 NONE
        aguB  359598 ..  359655 -    -2  -2.71712   CGCTGCTCCTGAAAT CGTTGCTATGCGCGGCGGACG-CCGGCGC GGAAT GCGCGGGGCGTCC-CCGCGCG--G-ATCG TTTCCCGAGGCCTCA  39 38
        aguA  358363 ..  358389 - -23.8   -4.8048   GCCGGACAGGAAAAA         GCCCGCGTCCTC CTG GAGGACGCGGGC         TTTTTTCATTCACGG 100 112
HR116_RS01570  347955 ..  347982 - -14.9  -3.32294   GTAAAGTGGTTATAA        GACGGCGAAGC GGCCCG GCTTCGCCGCC         AGGCTCAGTCTTCCG  82 30
        oscA  347530 ..  347566 -  -2.8  -3.08015   GGAACGACGGGAACA   CGGGGC-GTCAGGCGCG CATT CGCGGCCGACAGCTGCA    GTACCGGTGCGGATG  43 100
HR116_RS01560 NONE
        cysT NONE
        cysW NONE
HR116_RS01545  343449 ..  343478 - -11.3  -3.19192   CTGGAGCGAACGCAA       GCCGCACCTCGGCG GCG CGCTGGGG-GCGGC       GTTGCTGGAGGCCTG  64 160
HR116_RS01535  342065 ..  342079 -    -7  -3.59979   TGGCGTCAGTGGAAA               CCGCGC CAG GCGAGG               TCGGCGCCGAGCAGC  59 1
HR116_RS01530  341073 ..  341098 -  -3.1   -3.4072   CATTCGCGAGCACAA         GCGGGCGGC GTGAGGCG GTCTCCCGC          GAGCGCGGGAGACCG  49 52
HR116_RS01520 NONE
HR116_RS01515  338826 ..  338838 -  -9.1  -4.54727   GGCGGCAAATCAAAA                TCCGC AGG GCGGA                TTCGAAAAAATGCGC  91 116
HR116_RS01510 NONE
HR116_RS01505  336364 ..  336376 -  -3.3  -3.61398   CTGCGCCTGCAACAA                CTGGT CGA ACCGG                GGCTGGAGGCGCCGG  49 219
HR116_RS01485  333737 ..  333755 - -13.1  -2.58249   CATAGGGCGGATAAC             GCGGCGC GTCAT GCGCCGC             TGGGCATGGGCGCGG  67 121
HR116_RS01465  328101 ..  328122 - -15.9  -2.65106   AACAACTGAAGTAAC           GAAGGGGCC GAAA GGCCCCTTC            TGCTTAGGTGCTTTC  77 290
HR116_RS01445  326039 ..  326063 - -17.2  -3.72576   CCGTGCCTGACCAAA          TCCGGAGGGC ATTCA GCCCTCCGGA          TCATCCTGCAGTTCC 100 13
HR116_RS01425  318550 ..  318569 -  -5.6  -4.08394   ACATGCGGCCGAAAA            CCAGCCAA TACA CCGGCCGG             GTTAGTCGTCCTGGG  64 467
HR116_RS01405  317018 ..  317033 - -10.4  -3.29461   TAACTCTGGGTAGAA              GCGCCA TCCT TGGCGC               AGGGGTGATCAAACT  66 34
HR116_RS01400 NONE
HR116_RS01395 NONE
HR116_RS01390  313660 ..  313673 -  -3.1  -2.64333   GCTGAAAACTAATAG               TGCGA TCCT TCACA                TGACCTCCTTAGCAT  39 21
HR116_RS01385 NONE
HR116_RS01380 NONE
HR116_RS01375 NONE
HR116_RS01370  307290 ..  307307 -  -5.6  -3.25823   GGGTCTGGAGATCAA             GTGCAT TGATGG ATGCAC              GTGAATCAACAGATG  52 42
HR116_RS01365 NONE
HR116_RS01360  297357 ..  297375 -  -6.6  -3.85909   GGATTGAAAGTCAAA             GTCGGCTC TGA GAACCGCC             TATATAGCCTCAGTC  62 276
HR116_RS01350  295565 ..  295582 -  -7.7  -3.02144   GGAGCTGTTTGAACA             GCACTCA CTGG TGAGCGC              AGTCGTCGAGCCGAC  53 318
HR116_RS01325  288102 ..  288130 -  -7.4  -2.81815   TCTAAGCATGAAGGA        CTCTGCTCTTGC AGGAG GCAATGGCAGAG        CGGCAAGCACCGGGA  52 69
HR116_RS01320  286355 ..  286365 -  -2.4  -4.18018   TCTCCCCAGGGAAAA                 GGCC AGG GGCG                 AGGCGGAGCGTCTGG  59 87
HR116_RS01315  285465 ..  285476 -  -5.8  -3.50393   CGCCATTCCATATAA                GTGC GTGT GCAC                 GCATCCTATTGAATG  55 126
HR116_RS01310 NONE
HR116_RS01305 NONE
HR116_RS01300  283029 ..  283045 - -10.1  -5.15969   CGGGAACGGAAAAAA              GCCCGTC GGG AACGGGC              GAAGAGGGAAGCTTA 100 38
HR116_RS01295  282071 ..  282083 -  -2.6  -4.11484   GGCAAGCGGGGAAAA                CGGC ATCGA ACCG                ATTGAAAAACGTCAT  59 94
HR116_RS01290  281485 ..  281515 -    -3  -2.85999   TCAGCGGAGAGGACA       TGGCGGCAGCTCGC AAC GGGAACAGCCGCGG       ATTATCGCGTGAGCC  42 73
HR116_RS01285  280604 ..  280640 - -11.3  -2.89564   GTTCGACGCCATAGA    CGGCGAGTACGCCGGCG CTG CGCCGGCGCGCGAGCTG    TTGTTGCAGTCGCTG  61 424
        pobA  278782 ..  278808 -  -9.2  -3.53012   TCCCGCCTTGGGAAA         GGTGCCCCGGCG TTG CGCCGGGGTGGC         GCGGCCTACTCGATT  65 31
HR116_RS01270  277085 ..  277119 -  -6.3  -3.54424   GGTTACTTTTGTAAA     CCGGACGCCGTCGCC GACGG GACGAAAGCGTTCGA     TTATCGGCGTCCGCT  59 40
        aroQ  276556 ..  276587 -  -5.1  -3.29144   TCAGGCCGGCGAGAA     CCGATCGCGGCGCGC TCAT GCG-GCCGCC-TCGA      AACGCTCGGCGAAAT  50 9
HR116_RS01260  275401 ..  275417 -  -3.6  -3.43961   CGAGAACATCCACAA              GGGCGA GCACA TCGCCA              GCAGCGAACTGGTGC  49 328
HR116_RS01245 NONE
HR116_RS01240  269516 ..  269530 -  -4.2  -3.04144   CCGGCATCTTCAATA               CGCTCA TCA TGAGCC               TGCTGGTGCCGTTCT  44 326
HR116_RS01215  263913 ..  263957 -  -8.7  -3.79906   GTATTGGCACAACAA GTTCGGCGTCGACGGTGGCACC GGCA GCCG-CACC-TCGACGCCG-AC GTTGAATATGGAATT  69 290
HR116_RS01160  253334 ..  253350 -  -3.6  -2.74461   CATTGAGTGGGAAAT              GCCAGG ACGGA CCTGGT              GGGAAAGGTCGTTCA  40 38
HR116_RS01155  252370 ..  252399 - -15.7  -5.40072   GCGTCGGCAAAAAAA       CGACGGGCCCCAA GTCG TCCGGGCCCGTCG        GGTCAAAGCGCTGAC 100 48
HR116_RS01130  245429 ..  245440 -  -4.4  -3.32695   TTGTCAGAAAGAAAG                TTCC TCTT GGAA                 TGTCGGAAAGCTGAG  48 43
HR116_RS01125  244696 ..  244735 -  -5.8  -4.59773   CGGGAGGGGTAAAAA  GGGCCGTCATG-TCC TAGCGCGTGGC GGAGCATGACGGCCT  GGAAACGCCTTGGGG  76 110
HR116_RS01120  243436 ..  243448 -  -2.6  -2.76815   ATCGGCCTGAACAAT                CCAC GTACG GCGG                TGATCTTCGGTGGTC  38 280
HR116_RS01065  233893 ..  233907 -  -7.8  -2.50994   CCGAAGGGGATCAAT               CCAGCA GGA CGCTGG               CGCTGTCTTTGGCCA  50 6
HR116_RS01060 NONE
HR116_RS01055 NONE
HR116_RS01050  231068 ..  231087 -  -3.4  -3.53811   GCCAGGGGCGCGAAA            CGGCGCTG CGCT CAGCGCAT             CAGGTTGGTCCACAG  51 17
HR116_RS01045  229037 ..  229065 -    -6  -3.57263   ACGCCCATTGGCAAA       GTCACT-GGCAGC GCGC GCTGCCCAATGCC        TCACGGGTCGAGCAA  56 516
HR116_RS01035  228369 ..  228393 -  -9.2  -2.57013   GCTGAAGCGAATCCA         CGCCGTCCGGC GCAG GCCGGGCGG-G          CAACGGTTTCGACCG  56 171
HR116_RS00985  216906 ..  216931 - -17.5   -2.8739   TAGAGGAAGGGAAAC         CGCGCGGCGGC TCAG GCCGCCGCGTG          TTGCGCCTGGTCCAG  87 11
HR116_RS00975  214528 ..  214561 - -20.9  -3.01712   CCGCGCGCGTGAAGA     CGATCCGGGCCGCCC CGCG GGGCGGCCCGGGGCG      TCACCAGATCGAGCG  93 26
HR116_RS00955 NONE
HR116_RS00950  208575 ..  208595 -  -8.1  -3.41602   TGGATGGGAGGAGAA            GGTGGGGCC CTC GCCCCCGCC            CTTCCCGCAGGGGGA  63 63
HR116_RS00945  206595 ..  206605 -  -8.2  -3.14132   GGTCGGCCTGACCAA                 GGGC CTG GCCC                 GCGACCTCGGCCCGC  56 355
HR116_RS00935  204966 ..  204984 -  -2.4  -3.66356   ATCGGTAATGTCAAA            CT-GCCG TTTTTC CGGCGAG             GCCGGTGCCAGGGCC  49 75
HR116_RS00930 NONE
HR116_RS00925 NONE
HR116_RS00920 NONE
HR116_RS00915 NONE
HR116_RS00910 NONE
HR116_RS00905 NONE
        cheD NONE
HR116_RS00895  195933 ..  195949 - -10.8  -3.68351   TGGCGAGCAGGCAAA              GGCCCG TGGTT CGGGCC              TGTCGTCGGCGGGGT  76 101
HR116_RS00890 NONE
HR116_RS00885 NONE
HR116_RS00880 NONE
HR116_RS00875  191855 ..  191871 -  -9.3  -2.73875   GGCGGCCGAAGACTA              CGGCGCC GAC GGCGTCG              TCCTGACCCTGGAGT  55 133
HR116_RS00850  187693 ..  187704 -  -7.2  -4.75404   AAACCCGACGAAAAA                CCCC ATTC GGGG                 ATGAATTCCGCCCGC  86 129
HR116_RS00840  184514 ..  184537 -  -8.2  -2.57132   GCGGTGCTGCAGAAG          GTC-AACGGCA ATA CGCCGTTCGAC          TACATCAACCAGGGC  52 459
HR116_RS00755  164189 ..  164236 -  -9.6  -2.52543   ATGGCCGGCAAGCGA CGGGCCGGGCGGCGGCTATCTG CCAG CAGCTAGGCGACGGCCTTCCCG CGATGTCAGGCGCGC  56 31
HR116_RS00750  163409 ..  163419 -  -8.2  -2.78547   CGAGTGGATCAACGA                 GGGC GAC GCCC                 AGGGGTTCTTCGACC  52 100
        ppk2  159547 ..  159582 - -12.4  -2.71731   GCGACCGTCGAACCA    GGGACGCCCGGAGCGC GAAA GCGCCCCGGGCGTTTT     CGTTGGCGCGACCGC  66 46
        guaD  150648 ..  150680 -  -2.7  -3.40878   AGGAGCTGAACAACA     GCGCCA-GCGCCTCG GACCG CGAGG-GCATGGCAT     TCCTGATCCTGACCG  48 332
HR116_RS00695 NONE
HR116_RS00690  148141 ..  148152 -  -7.2  -3.73224   CTAGGGGTGACGAAA                GGGC CGTG GCCC                 TTTCCCTTTACCCGC  65 62
HR116_RS00685  146573 ..  146596 - -16.8  -5.93252   CGGAAAAAGAAAAAA          GGCATGGTCG TTAC CGACCATGCC           TGTCGTCGTCAGCCT 100 41
        gabP  144954 ..  144972 - -17.4  -3.61517   ACCTTGCCTGAAGAA             GCCCGGCC ATT GGCCGGGC             TTTTCTTTGGAGGGC 100 69
HR116_RS00665  143258 ..  143285 -  -8.2  -2.71144   CAGTGGGTTGAATGA        GGAGCCCGCCCC GAGC GGGGCGGGCGGA         AGGGGGCGCGGGATT  54 39
HR116_RS00660 NONE
HR116_RS00655  142384 ..  142396 -  -4.7   -3.0169   AAGCGCGAGAAAGCA                TGCCC AGC GGGCG                AGGTCGTCGGGTTTC  47 248
HR116_RS00650  141014 ..  141030 -  -2.1  -3.64703   GTCGTGGTATCCAAA              TCCATCG GCA CGGTGGG              CATCCGCAACGCCAC  51 406
HR116_RS00610  134903 ..  134931 -    -3  -3.61398   CGCGCCGCTGAACAA        CGCCAAGCTG GAAGCCCAA CTGCCCGGCG        TGCTCAAGCCGCAGG  51 80
HR116_RS00580  130297 ..  130309 -  -4.7  -4.09963   CCTGAAGAAGAACAA                GCGCG GCC CGCTC                AAGGCCTGGCTGGCG  62 356
HR116_RS00555  125151 ..  125171 -  -2.3  -3.21218   ACCGGCGAGCATGAA            GCCGAGCTG CGC CTGAGCGGC            GCCGCGACTTTCCTC  42 279
HR116_RS00505 NONE
HR116_RS00500 NONE
HR116_RS00495  111781 ..  111824 - -15.5  -3.29461   CAACCTGGTCGAGAA CGATGC-CTCGCTGTCGGTCG GCCA CGACCG-CAACAAGAGCATCG GCCACGACGAGCTGG  80 499
        tagH   97564 ..   97578 -  -3.5  -3.14132   CGTTGGCGTCAGGAA              CGC-CG TAGT CGAGCG               CTGTGTTCCTCGTAG  44 4
        tssJ NONE
        tssK NONE
HR116_RS00425 NONE
        tssM   90818 ..   90831 -  -3.1  -2.72144   CGACGCTGTTCAAAG               GCGCTC CGG GAG-GC               TGAAGCCGGACACGA  40 6
        tagF NONE
HR116_RS00410   89403 ..   89421 - -12.4  -3.28791   ATGTCCGTCTCAGAA             GGCCCTGA CCA CCAGGGCC             GTGATGTTGTCCGGG  72 1
HR116_RS00405 NONE
HR116_RS00400   85577 ..   85590 -  -2.3  -3.09516   GCGCGCATCAGCCAA               CTTCC TCGA GGCAG                GCGCCGACGCTGTCG  41 4
HR116_RS00395 NONE
HR116_RS00390   82629 ..   82657 - -10.2  -3.14132   TCCTGGTTTGATGAA       CCGCCCGGCTGCC GAGA GGG-GCCGGACGG        AACTCCTTCAACGCC  64 33
HR116_RS00385   81642 ..   81661 -   -15  -3.90112   GCCCCCTCAACGAAA            CGGCGACC CGAA GGTCGCCG             TCGCGTTCGTGCCGG  89 53
HR116_RS00365 NONE
HR116_RS00360 NONE
HR116_RS00355   75315 ..   75337 -  -6.9  -3.40403   CGGCCGCGAGGAGAA           GCGCCGCGA GCAGT TCACCGCGC           TGGTCCTGGCCAGTC  56 389
HR116_RS00345   74038 ..   74054 -  -2.2  -2.78816   TCAGCTCCTAGCATA              GCGC CCTCGCCTT GCGC              CGTTCAGACCTTCGC  39 29
HR116_RS00340   73543 ..   73574 -  -3.6   -3.8512   CATCTACCAGAAGAA      CGACG-ACTGAGCCG CTG CGTTTCAGTACGGCG      GGCAGCGGCTGGTCT  56 15
HR116_RS00315 NONE
HR116_RS00310 NONE
HR116_RS00305   68587 ..   68610 -  -5.2  -4.20918   GCCAATGGCAACAAA          CGCA-CGGCGG CGG CGGCCGCTACG          GTTTTCCTCCTGCTC  69 243
HR116_RS00290   67110 ..   67120 -  -8.2  -3.13403   CCTGGTCGATCAAGA                 GCCG GGA CGGC                 GAGGAGAAGTGGCTG  56 378
HR116_RS00270   62326 ..   62347 -  -6.5  -2.66733   GGCGAAGCGATAGGA           CGCGAGG-GC CTT GCGCCTGGCG           AGGACTAGTCCGCTT  48 30
HR116_RS00265   61267 ..   61283 -  -4.4  -3.28924   GACCTTCCGCCAGAA             CGGC-CT GACC AGCGCCG              GCGACGTGCACCAGG  49 429
HR116_RS00240   56128 ..   56140 -  -6.9  -3.50853   GGTCCTGAACCAGAA                GACCG GCA CGGCC                AACCAGAGCGGCTAT  58 383
        trpB NONE
HR116_RS00180   37020 ..   37051 -   -13  -3.17392   CAGCGTGCAACGCAA      GGCCAGGCGCAG CGGGTTGC CTGCGCCTGGCG       AATGCCGCTGTCAGG  73 46
HR116_RS00175   36271 ..   36282 -  -2.2  -2.62983   GGGATCCTCAGATCA                GCTCG TGG CG-GC                GGGCGAAATCGATCA  38 6
HR116_RS00170   35379 ..   35397 -  -5.8  -3.01712   CGGCCTGCTCGAACA             GGGGCTGC TTT GCCGGCCC             ATTGGCGAGAGCTGC  47 518
        betC NONE
HR116_RS00150 NONE
HR116_RS00145   30342 ..   30388 - -11.3  -3.02144   CGAGGCGGCCGAACA GGGTGGCGAGCGCAGCGCCGA GGAAA TCGACGAGGCTCGCGCCGCCC TTGGACAGTTGGAGA  62 124
HR116_RS00115   24198 ..   24217 -  -4.8  -3.01712   CTTCCTTCTCGAAGA            CCTGCCGG ACGT CTGGCTGG             ACCGCCTGGCCGGTA  45 361
HR116_RS00095   21020 ..   21037 - -11.3  -5.45802   TCGCTAAAAGAAAAA             GGCTTGC CGGG GCAAGCC              TTTGGGGGATGGGGT 100 40
         fmt NONE
        rsmB NONE
        trkA NONE
HR116_RS00075   16858 ..   16868 -  -8.2  -3.28712   GGCGGGTGGCGAGAA                 CGCG CTG CGCG                 AGCCTTGGCCGGACG  60 42
HR116_RS00070   16284 ..   16311 - -19.2  -3.16742   GGCAATCTGGAGGAA        GGGCGCAACGGC CGTG ACCGTTGCGCCC         TTCTTCATTCAGGAG  93 34
        glyQ NONE
HR116_RS00040   10375 ..   10401 - -15.1  -4.65895   TCCTGTAGTGAAAAA         GGCCCGGTGTC GCGAG GACGCCGGGCC         TTTTCTTCGAGGCGG 100 48
        gmhB NONE
HR116_RS00025    6934 ..    6957 - -18.2  -4.17048   CTCGCGTGAAAACAA          GAAGCCCCGC TATG GCGGGGCTTC           TTTTATCGAATCGGC 100 75
