locus-tag	class	description
DPADHS01_RS00035	COG2010	Cytochrome c
DPADHS01_RS00050	COG2818	Glycosylase
DPADHS01_RS00065	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DPADHS01_RS00080	COG0569	domain protein
DPADHS01_RS00100	COG1652	LysM domain
DPADHS01_RS00105	COG0758	DNA mediated transformation
DPADHS01_RS00135	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS00155	COG3119	arylsulfatase activity
DPADHS01_RS00160	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00195	COG3360	Dodecin
DPADHS01_RS00210	COG3210	domain, Protein
DPADHS01_RS00225	COG3174	membrane
DPADHS01_RS00270	COG0367	asparagine synthase
DPADHS01_RS00290	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00305	COG1764	response to oxidative stress
DPADHS01_RS00340	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DPADHS01_RS00345	COG0339	signal peptide processing
DPADHS01_RS00350	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DPADHS01_RS00365	COG1262	PFAM Formylglycine-generating sulfatase enzyme
DPADHS01_RS00380	COG2815	serine threonine protein kinase
DPADHS01_RS00380	COG0515	serine threonine protein kinase
DPADHS01_RS00385	COG0631	protein serine/threonine phosphatase activity
DPADHS01_RS00400	COG1360	Flagellar Motor Protein
DPADHS01_RS00525	COG0659	secondary active sulfate transmembrane transporter activity
DPADHS01_RS00535	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DPADHS01_RS00540	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DPADHS01_RS00545	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
DPADHS01_RS00585	COG2153	protein acetylation
DPADHS01_RS00625	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00650	COG2824	Alkylphosphonate utilization operon protein PhnA
DPADHS01_RS00680	COG0402	S-adenosylhomocysteine deaminase activity
DPADHS01_RS00690	COG3845	ABC transporter
DPADHS01_RS00695	COG4603	Belongs to the binding-protein-dependent transport system permease family
DPADHS01_RS00700	COG1079	Belongs to the binding-protein-dependent transport system permease family
DPADHS01_RS00770	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00775	COG3485	protocatechuate 3,4-dioxygenase
DPADHS01_RS00780	COG3485	protocatechuate 3,4-dioxygenase
DPADHS01_RS00785	COG1414	Transcriptional regulator
DPADHS01_RS00800	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS00805	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00840	COG2233	PERMEase
DPADHS01_RS00845	COG1309	transcriptional regulator
DPADHS01_RS00880	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
DPADHS01_RS00895	COG0835	chemotaxis
DPADHS01_RS00900	COG0643	Histidine kinase
DPADHS01_RS00900	COG2198	Histidine kinase
DPADHS01_RS00905	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS00915	COG0583	DNA-binding transcription factor activity
DPADHS01_RS00920	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS00930	COG1116	anion transmembrane transporter activity
DPADHS01_RS00935	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS00940	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS00980	COG2175	clavaminate synthase activity
DPADHS01_RS01055	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DPADHS01_RS01080	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS01085	COG1113	amino acid transport
DPADHS01_RS01100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DPADHS01_RS01105	COG0235	Class ii aldolase
DPADHS01_RS01110	COG1396	sequence-specific DNA binding
DPADHS01_RS01115	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DPADHS01_RS01120	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DPADHS01_RS01130	COG0477	Major facilitator Superfamily
DPADHS01_RS01140	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DPADHS01_RS01145	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DPADHS01_RS01150	COG0583	DNA-binding transcription factor activity
DPADHS01_RS01170	COG0673	inositol 2-dehydrogenase activity
DPADHS01_RS01190	COG2271	Major facilitator Superfamily
DPADHS01_RS01200	COG1309	transcriptional regulator
DPADHS01_RS01205	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DPADHS01_RS01215	COG0477	Major facilitator Superfamily
DPADHS01_RS01235	COG2239	Acts as a magnesium transporter
DPADHS01_RS01275	COG2801	Transposase and inactivated derivatives
DPADHS01_RS01330	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS01340	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DPADHS01_RS01355	COG0583	DNA-binding transcription factor activity
DPADHS01_RS01360	COG2807	transmembrane transport
DPADHS01_RS01380	COG0501	Belongs to the peptidase M48B family
DPADHS01_RS01400	COG4208	sulfate ABC transporter
DPADHS01_RS01410	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DPADHS01_RS01430	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DPADHS01_RS01445	COG2199	diguanylate cyclase activity
DPADHS01_RS01470	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DPADHS01_RS01475	COG0174	glutamine synthetase
DPADHS01_RS01480	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DPADHS01_RS01485	COG0174	glutamine synthetase
DPADHS01_RS01505	COG3842	ATPase activity
DPADHS01_RS01510	COG1176	ABC-type spermidine putrescine transport system, permease component I
DPADHS01_RS01515	COG1177	transmembrane transport
DPADHS01_RS01565	COG0765	amino acid transport
DPADHS01_RS01580	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DPADHS01_RS01585	COG0277	FAD linked oxidase domain protein
DPADHS01_RS01590	COG0179	Fumarylacetoacetate (FAA) hydrolase
DPADHS01_RS01600	COG3111	PFAM Bacterial OB fold (BOF) protein
DPADHS01_RS01610	COG0531	amino acid
DPADHS01_RS01615	COG2182	Extracellular solute-binding protein
DPADHS01_RS01620	COG1177	transmembrane transport
DPADHS01_RS01630	COG3842	ATPase activity
DPADHS01_RS01635	COG3204	pilus organization
DPADHS01_RS01640	COG2234	aminopeptidase activity
DPADHS01_RS01655	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DPADHS01_RS01665	COG0702	epimerase
DPADHS01_RS01705	COG0730	response to heat
DPADHS01_RS01740	COG0584	glycerophosphoryl diester phosphodiesterase
DPADHS01_RS01760	COG0622	Phosphoesterase
DPADHS01_RS01765	COG2233	PERMEase
DPADHS01_RS01780	COG0693	protein deglycase activity
DPADHS01_RS01815	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DPADHS01_RS01825	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
DPADHS01_RS01850	COG0429	hydrolase of the alpha beta-hydrolase fold
DPADHS01_RS01860	COG0742	ribosomal rna small subunit methyltransferase
DPADHS01_RS01865	COG0612	Peptidase, M16
DPADHS01_RS01870	COG0612	Peptidase, M16
DPADHS01_RS01875	COG0552	protein localization to endoplasmic reticulum
DPADHS01_RS01880	COG2884	Cell division ATP-binding protein ftsE
DPADHS01_RS01885	COG2177	Part of the ABC transporter FtsEX involved in
DPADHS01_RS01905	COG2363	Small membrane protein
DPADHS01_RS01940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DPADHS01_RS01955	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DPADHS01_RS01955	COG2813	Specifically methylates the guanine in position
DPADHS01_RS01965	COG1160	GTP binding
DPADHS01_RS01970	COG1872	DUF167
DPADHS01_RS02015	COG0626	cystathionine gamma-synthase activity
DPADHS01_RS02080	COG2198	Histidine kinase
DPADHS01_RS02080	COG0784	Response regulator, receiver
DPADHS01_RS02080	COG0643	Histidine kinase
DPADHS01_RS02110	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DPADHS01_RS02125	COG3038	cytochrome b561
DPADHS01_RS02155	COG0513	Belongs to the DEAD box helicase family
DPADHS01_RS02165	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DPADHS01_RS02170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DPADHS01_RS02195	COG1309	transcriptional regulator
DPADHS01_RS02200	COG0402	S-adenosylhomocysteine deaminase activity
DPADHS01_RS02205	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DPADHS01_RS02215	COG0493	'glutamate synthase
DPADHS01_RS02230	COG1953	Uracil, thiamine, allantoin
DPADHS01_RS02245	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS02250	COG0583	DNA-binding transcription factor activity
DPADHS01_RS02260	COG0306	phosphate transporter
DPADHS01_RS02270	COG0330	HflC and HflK could
DPADHS01_RS02280	COG1289	transmembrane transporter activity
DPADHS01_RS02285	COG0513	Belongs to the DEAD box helicase family
DPADHS01_RS02295	COG4067	protein conserved in archaea
DPADHS01_RS02295	COG0189	ligase activity
DPADHS01_RS02305	COG0477	Major facilitator Superfamily
DPADHS01_RS02310	COG0542	response to heat
DPADHS01_RS02320	COG0204	Acyl-transferase
DPADHS01_RS02330	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS02335	COG2205	protein histidine kinase activity
DPADHS01_RS02340	COG4452	Inner membrane protein CreD
DPADHS01_RS02370	COG4774	siderophore transport
DPADHS01_RS02375	COG3712	iron ion homeostasis
DPADHS01_RS02380	COG1595	DNA-templated transcription, initiation
DPADHS01_RS02385	COG0625	glutathione transferase activity
DPADHS01_RS02395	COG1309	transcriptional regulator
DPADHS01_RS02400	COG1953	Uracil, thiamine, allantoin
DPADHS01_RS02420	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DPADHS01_RS02455	COG2005	Transcriptional regulator
DPADHS01_RS02455	COG3585	molybdate ion transport
DPADHS01_RS02460	COG5544	Lipoprotein
DPADHS01_RS02465	COG1040	competence protein
DPADHS01_RS02485	COG0511	ligase activity, forming carbon-carbon bonds
DPADHS01_RS02500	COG1984	allophanate hydrolase subunit 2
DPADHS01_RS02515	COG3121	Chaperone
DPADHS01_RS02530	COG2226	methyltransferase
DPADHS01_RS02530	COG1073	alpha beta
DPADHS01_RS02550	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS02555	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS02560	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS02570	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DPADHS01_RS02570	COG1648	precorrin-2 dehydrogenase activity
DPADHS01_RS02655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DPADHS01_RS02660	COG0583	DNA-binding transcription factor activity
DPADHS01_RS02665	COG2258	MOSC domain
DPADHS01_RS02675	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DPADHS01_RS02695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS02705	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DPADHS01_RS02760	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DPADHS01_RS02765	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DPADHS01_RS02775	COG3622	Belongs to the hyi family
DPADHS01_RS02780	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DPADHS01_RS02820	COG2081	HI0933 family
DPADHS01_RS02825	COG1451	nucleotide metabolic process
DPADHS01_RS02830	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DPADHS01_RS02835	COG3152	Membrane
DPADHS01_RS02840	COG4977	sequence-specific DNA binding
DPADHS01_RS02840	COG1917	Cupin 2, conserved barrel domain protein
DPADHS01_RS02845	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DPADHS01_RS02940	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DPADHS01_RS02960	COG2719	SpoVR family
DPADHS01_RS02970	COG2766	serine protein kinase
DPADHS01_RS03020	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DPADHS01_RS03035	COG2197	response regulator
DPADHS01_RS03045	COG3842	ATPase activity
DPADHS01_RS03055	COG1176	ABC-type spermidine putrescine transport system, permease component I
DPADHS01_RS03065	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DPADHS01_RS03090	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DPADHS01_RS03175	COG3179	chitinase
DPADHS01_RS03190	COG0582	viral genome integration into host DNA
DPADHS01_RS03215	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DPADHS01_RS03230	COG0497	DNA recombination
DPADHS01_RS03250	COG2003	Belongs to the UPF0758 family
DPADHS01_RS03325	COG1765	OsmC-like protein
DPADHS01_RS03340	COG0537	adenosine 5'-monophosphoramidase activity
DPADHS01_RS03365	COG1981	membrane
DPADHS01_RS03395	COG0739	heme binding
DPADHS01_RS03560	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DPADHS01_RS03685	COG2814	Major facilitator Superfamily
DPADHS01_RS03760	COG1021	2,3-dihydroxybenzoate-AMP ligase
DPADHS01_RS03770	COG3433	isochorismatase activity
DPADHS01_RS03770	COG2226	methyltransferase
DPADHS01_RS03770	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DPADHS01_RS03775	COG3433	isochorismatase activity
DPADHS01_RS03775	COG2226	methyltransferase
DPADHS01_RS03775	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DPADHS01_RS03785	COG2375	cellular response to nickel ion
DPADHS01_RS03785	COG1132	(ABC) transporter
DPADHS01_RS03865	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS03870	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS03880	COG2706	6-phosphogluconolactonase activity
DPADHS01_RS03900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DPADHS01_RS03905	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS03915	COG4191	Histidine kinase
DPADHS01_RS03920	COG4566	intracellular signal transduction
DPADHS01_RS03925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS03930	COG0765	amino acid transport
DPADHS01_RS03935	COG0765	amino acid transport
DPADHS01_RS03955	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS03960	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DPADHS01_RS03965	COG2271	Major facilitator Superfamily
DPADHS01_RS04010	COG2226	methyltransferase
DPADHS01_RS04020	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS04035	COG0251	oxidation-reduction process
DPADHS01_RS04045	COG0693	protein deglycase activity
DPADHS01_RS04050	COG0492	ferredoxin-NADP+ reductase activity
DPADHS01_RS04055	COG1959	2 iron, 2 sulfur cluster binding
DPADHS01_RS04085	COG0154	amidase activity
DPADHS01_RS04090	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS04095	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DPADHS01_RS04100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DPADHS01_RS04105	COG4592	Periplasmic binding protein
DPADHS01_RS04110	COG1120	ATPase activity
DPADHS01_RS04120	COG1629	transport
DPADHS01_RS04120	COG4774	siderophore transport
DPADHS01_RS04125	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DPADHS01_RS04130	COG4991	sh3 domain protein
DPADHS01_RS04135	COG1063	alcohol dehydrogenase
DPADHS01_RS04145	COG0022	dehydrogenase e1 component
DPADHS01_RS04150	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DPADHS01_RS04155	COG3199	ATP-NAD kinase
DPADHS01_RS04165	COG3284	Transcriptional regulator
DPADHS01_RS04190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS04365	COG1598	PFAM Uncharacterised protein family UPF0150
DPADHS01_RS04370	COG1724	mRNA binding
DPADHS01_RS04380	COG3179	chitinase
DPADHS01_RS04415	COG0740	serine-type endopeptidase activity
DPADHS01_RS04520	COG2814	Major facilitator Superfamily
DPADHS01_RS04525	COG1846	Transcriptional regulator
DPADHS01_RS04535	COG3278	Belongs to the heme-copper respiratory oxidase family
DPADHS01_RS04540	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DPADHS01_RS04550	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DPADHS01_RS04565	COG3971	2-oxopent-4-enoate hydratase activity
DPADHS01_RS04570	COG2271	Major facilitator Superfamily
DPADHS01_RS04580	COG3384	dioxygenase
DPADHS01_RS04585	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS04625	COG1611	Belongs to the LOG family
DPADHS01_RS04685	COG2259	Doxx family
DPADHS01_RS04695	COG2205	protein histidine kinase activity
DPADHS01_RS04720	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS04725	COG1063	alcohol dehydrogenase
DPADHS01_RS04730	COG2271	Major facilitator Superfamily
DPADHS01_RS04765	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS04770	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DPADHS01_RS04785	COG3121	Chaperone
DPADHS01_RS04790	COG3188	usher protein
DPADHS01_RS04795	COG3121	Chaperone
DPADHS01_RS04800	COG3210	domain, Protein
DPADHS01_RS04810	COG2197	response regulator
DPADHS01_RS04850	COG0531	amino acid
DPADHS01_RS04870	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DPADHS01_RS04880	COG3047	cAMP biosynthetic process
DPADHS01_RS04910	COG3118	belongs to the thioredoxin family
DPADHS01_RS04915	COG2264	protein methyltransferase activity
DPADHS01_RS04930	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DPADHS01_RS04930	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DPADHS01_RS04955	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DPADHS01_RS04960	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DPADHS01_RS04970	COG3577	Aspartyl protease
DPADHS01_RS04995	COG0142	geranyltranstransferase activity
DPADHS01_RS05005	COG4948	Mandelate Racemase Muconate Lactonizing
DPADHS01_RS05025	COG1131	(ABC) transporter
DPADHS01_RS05030	COG5002	protein histidine kinase activity
DPADHS01_RS05050	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS05060	COG3228	Belongs to the MtfA family
DPADHS01_RS05065	COG0586	Pfam SNARE associated Golgi protein
DPADHS01_RS05080	COG0456	acetyltransferase
DPADHS01_RS05090	COG4303	Ethanolamine ammonia lyase large subunit
DPADHS01_RS05095	COG0531	amino acid
DPADHS01_RS05105	COG3284	Transcriptional regulator
DPADHS01_RS05110	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DPADHS01_RS05125	COG0702	epimerase
DPADHS01_RS05145	COG1346	cytolysis
DPADHS01_RS05155	COG0586	Pfam SNARE associated Golgi protein
DPADHS01_RS05195	COG0768	penicillin binding
DPADHS01_RS05200	COG0772	Belongs to the SEDS family
DPADHS01_RS05205	COG2951	lytic endotransglycosylase activity
DPADHS01_RS05215	COG1686	Belongs to the peptidase S11 family
DPADHS01_RS05320	COG4397	Mu-like prophage major head subunit gpT
DPADHS01_RS05340	COG5005	Phage virion morphogenesis
DPADHS01_RS05345	COG2369	cell adhesion
DPADHS01_RS05350	COG4383	Mu-like prophage protein gp29
DPADHS01_RS05445	COG4396	Host-nuclease inhibitor protein Gam
DPADHS01_RS05510	COG2951	lytic endotransglycosylase activity
DPADHS01_RS05545	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DPADHS01_RS05555	COG4535	Mg2 and Co2 transporter CorC
DPADHS01_RS05565	COG1702	phosphate starvation-inducible protein PhoH
DPADHS01_RS05595	COG0351	phosphomethylpyrimidine kinase
DPADHS01_RS05600	COG0784	Response regulator, receiver
DPADHS01_RS05600	COG2198	Histidine kinase
DPADHS01_RS05600	COG2205	protein histidine kinase activity
DPADHS01_RS05610	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS05620	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DPADHS01_RS05660	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DPADHS01_RS05670	COG1643	Atp-dependent helicase
DPADHS01_RS05695	COG1061	Type III restriction enzyme res subunit
DPADHS01_RS05800	COG3416	Protein conserved in bacteria
DPADHS01_RS05810	COG0513	Belongs to the DEAD box helicase family
DPADHS01_RS05820	COG2197	response regulator
DPADHS01_RS05825	COG2200	EAL domain
DPADHS01_RS05825	COG2199	diguanylate cyclase activity
DPADHS01_RS05825	COG2202	Pas domain
DPADHS01_RS05830	COG2205	protein histidine kinase activity
DPADHS01_RS05830	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS05850	COG1946	Acyl-CoA thioesterase
DPADHS01_RS05870	COG4521	taurine ABC transporter
DPADHS01_RS05880	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS05885	COG2175	clavaminate synthase activity
DPADHS01_RS05890	COG1297	OPT oligopeptide transporter protein
DPADHS01_RS05895	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DPADHS01_RS05910	COG1271	oxidase subunit
DPADHS01_RS05915	COG1294	oxidase, subunit
DPADHS01_RS05925	COG2207	Transcriptional regulator
DPADHS01_RS05935	COG0183	Belongs to the thiolase family
DPADHS01_RS05940	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS05965	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
DPADHS01_RS05975	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DPADHS01_RS05985	COG0521	Mo-molybdopterin cofactor biosynthetic process
DPADHS01_RS05990	COG0303	'Molybdopterin
DPADHS01_RS05995	COG0826	peptidase U32
DPADHS01_RS06000	COG0826	peptidase U32
DPADHS01_RS06005	COG3154	lipid carrier protein
DPADHS01_RS06055	COG4772	TonB-dependent receptor
DPADHS01_RS06060	COG3712	iron ion homeostasis
DPADHS01_RS06065	COG1595	DNA-templated transcription, initiation
DPADHS01_RS06075	COG0697	spore germination
DPADHS01_RS06085	COG0583	DNA-binding transcription factor activity
DPADHS01_RS06105	COG1566	PFAM secretion protein HlyD family protein
DPADHS01_RS06155	COG0300	oxidoreductase activity
DPADHS01_RS06160	COG2226	methyltransferase
DPADHS01_RS06175	COG2197	response regulator
DPADHS01_RS06180	COG3850	Histidine kinase
DPADHS01_RS06190	COG2223	nitrite transmembrane transporter activity
DPADHS01_RS06195	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DPADHS01_RS06200	COG1140	nitrate reductase beta subunit
DPADHS01_RS06205	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DPADHS01_RS06210	COG2181	nitrate reductase activity
DPADHS01_RS06215	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS06225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS06250	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS06260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS06325	COG0583	DNA-binding transcription factor activity
DPADHS01_RS06355	COG0490	domain, Protein
DPADHS01_RS06355	COG0471	metal ion transport
DPADHS01_RS06360	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DPADHS01_RS06365	COG4120	Belongs to the binding-protein-dependent transport system permease family
DPADHS01_RS06415	COG0795	lipopolysaccharide-transporting ATPase activity
DPADHS01_RS06420	COG0795	lipopolysaccharide-transporting ATPase activity
DPADHS01_RS06430	COG2200	EAL domain
DPADHS01_RS06520	COG4397	Mu-like prophage major head subunit gpT
DPADHS01_RS06545	COG4383	Mu-like prophage protein gp29
DPADHS01_RS06550	COG4373	Mu-like prophage FluMu protein gp28
DPADHS01_RS06560	COG0640	Transcriptional regulator
DPADHS01_RS06630	COG0488	(ABC) transporter
DPADHS01_RS06690	COG5566	PFAM Mor transcription activator
DPADHS01_RS06730	COG3646	Phage regulatory protein
DPADHS01_RS06820	COG0305	Participates in initiation and elongation during chromosome replication
DPADHS01_RS06835	COG3646	Phage regulatory protein
DPADHS01_RS06845	COG3179	chitinase
DPADHS01_RS06865	COG4626	Terminase
DPADHS01_RS06865	COG1802	Transcriptional regulator
DPADHS01_RS06870	COG4695	Portal protein
DPADHS01_RS07010	COG1862	Preprotein translocase
DPADHS01_RS07025	COG3134	Outer membrane lipoprotein
DPADHS01_RS07040	COG1045	serine acetyltransferase
DPADHS01_RS07130	COG0436	Aminotransferase
DPADHS01_RS07145	COG0667	Aldo Keto reductase
DPADHS01_RS07185	COG0739	heme binding
DPADHS01_RS07195	COG2847	Copper chaperone PCu(A)C
DPADHS01_RS07205	COG1335	isochorismatase
DPADHS01_RS07220	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
DPADHS01_RS07230	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DPADHS01_RS07235	COG0583	DNA-binding transcription factor activity
DPADHS01_RS07295	COG0738	Major facilitator superfamily
DPADHS01_RS07305	COG2130	NADP-dependent
DPADHS01_RS07310	COG2132	Multicopper oxidase
DPADHS01_RS07315	COG0590	tRNA wobble adenosine to inosine editing
DPADHS01_RS07350	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DPADHS01_RS07350	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DPADHS01_RS07355	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DPADHS01_RS07360	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DPADHS01_RS07365	COG2188	Transcriptional regulator
DPADHS01_RS07405	COG0477	Major facilitator Superfamily
DPADHS01_RS07410	COG4536	flavin adenine dinucleotide binding
DPADHS01_RS07420	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DPADHS01_RS07445	COG1607	acyl-coa hydrolase
DPADHS01_RS07465	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DPADHS01_RS07490	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DPADHS01_RS07515	COG2255	four-way junction helicase activity
DPADHS01_RS07530	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DPADHS01_RS07540	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS07585	COG2197	response regulator
DPADHS01_RS07590	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DPADHS01_RS07610	COG0477	Major facilitator Superfamily
DPADHS01_RS07645	COG2203	Gaf domain
DPADHS01_RS07645	COG4251	negative regulation of phosphorylation
DPADHS01_RS07645	COG5001	Diguanylate cyclase
DPADHS01_RS07645	COG3706	GGDEF domain
DPADHS01_RS07650	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DPADHS01_RS07680	COG3064	Membrane
DPADHS01_RS07680	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
DPADHS01_RS07680	COG1073	alpha beta
DPADHS01_RS07695	COG2885	chlorophyll binding
DPADHS01_RS07710	COG0789	Transcriptional regulator
DPADHS01_RS07730	COG1214	PFAM Peptidase M22, glycoprotease
DPADHS01_RS07740	COG1801	Protein of unknown function DUF72
DPADHS01_RS07745	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
DPADHS01_RS07770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS07815	COG2166	iron-sulfur cluster assembly
DPADHS01_RS07830	COG1280	lysine exporter protein (LysE YggA)
DPADHS01_RS07835	COG1393	Belongs to the ArsC family
DPADHS01_RS07855	COG0025	NhaP-type Na H and K H
DPADHS01_RS07860	COG0436	Aminotransferase
DPADHS01_RS07870	COG0024	Methionine aminopeptidase
DPADHS01_RS07950	COG1115	amino acid carrier protein
DPADHS01_RS08000	COG2391	methyltransferase activity
DPADHS01_RS08005	COG0583	DNA-binding transcription factor activity
DPADHS01_RS08010	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
DPADHS01_RS08015	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DPADHS01_RS08065	COG1546	Belongs to the CinA family
DPADHS01_RS08085	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DPADHS01_RS08090	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
DPADHS01_RS08095	COG3530	Putative quorum-sensing-regulated virulence factor
DPADHS01_RS08110	COG1177	transmembrane transport
DPADHS01_RS08115	COG1176	ABC-type spermidine putrescine transport system, permease component I
DPADHS01_RS08125	COG3148	PFAM DTW domain containing protein
DPADHS01_RS08145	COG0069	glutamate synthase activity
DPADHS01_RS08170	COG0531	amino acid
DPADHS01_RS08175	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DPADHS01_RS08175	COG2169	Transcriptional regulator
DPADHS01_RS08180	COG0477	Major facilitator Superfamily
DPADHS01_RS08185	COG0583	DNA-binding transcription factor activity
DPADHS01_RS08190	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS08195	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DPADHS01_RS08200	COG1024	Enoyl-CoA hydratase
DPADHS01_RS08205	COG1250	3-hydroxyacyl-CoA dehydrogenase
DPADHS01_RS08210	COG0183	Belongs to the thiolase family
DPADHS01_RS08220	COG0583	DNA-binding transcription factor activity
DPADHS01_RS08255	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DPADHS01_RS08295	COG2814	Major facilitator Superfamily
DPADHS01_RS08335	COG0583	DNA-binding transcription factor activity
DPADHS01_RS08345	COG0084	hydrolase, TatD family'
DPADHS01_RS08350	COG1609	Transcriptional regulator
DPADHS01_RS08360	COG1105	Belongs to the carbohydrate kinase PfkB family
DPADHS01_RS08365	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DPADHS01_RS08365	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DPADHS01_RS08365	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DPADHS01_RS08475	COG3842	ATPase activity
DPADHS01_RS08495	COG0243	molybdopterin cofactor binding
DPADHS01_RS08500	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DPADHS01_RS08505	COG2223	nitrite transmembrane transporter activity
DPADHS01_RS08520	COG0450	alkyl hydroperoxide reductase
DPADHS01_RS08550	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS08590	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DPADHS01_RS08595	COG2264	protein methyltransferase activity
DPADHS01_RS08605	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DPADHS01_RS08660	COG0489	protein tyrosine kinase activity
DPADHS01_RS08705	COG0791	NLP P60 protein
DPADHS01_RS08720	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DPADHS01_RS08725	COG0668	transmembrane transport
DPADHS01_RS08730	COG0477	Major facilitator Superfamily
DPADHS01_RS08735	COG0513	Belongs to the DEAD box helicase family
DPADHS01_RS08755	COG5002	protein histidine kinase activity
DPADHS01_RS08755	COG0784	Response regulator, receiver
DPADHS01_RS08755	COG2205	protein histidine kinase activity
DPADHS01_RS08760	COG1363	Peptidase, m42
DPADHS01_RS08765	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DPADHS01_RS08765	COG0189	ligase activity
DPADHS01_RS08770	COG0367	asparagine synthase
DPADHS01_RS08795	COG0183	Belongs to the thiolase family
DPADHS01_RS08815	COG0450	alkyl hydroperoxide reductase
DPADHS01_RS08820	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS08825	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS08835	COG0431	NADPH-dependent FMN reductase
DPADHS01_RS08840	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS08850	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS08875	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DPADHS01_RS08900	COG0583	DNA-binding transcription factor activity
DPADHS01_RS08905	COG1380	Effector of murein hydrolase LrgA
DPADHS01_RS08910	COG1346	cytolysis
DPADHS01_RS08930	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS08935	COG1024	Enoyl-CoA hydratase
DPADHS01_RS08945	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
DPADHS01_RS08990	COG0508	dehydrogenase complex catalyzes the overall conversion of
DPADHS01_RS09030	COG1629	transport
DPADHS01_RS09085	COG0583	DNA-binding transcription factor activity
DPADHS01_RS09160	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DPADHS01_RS09165	COG3639	organic phosphonate transmembrane transporter activity
DPADHS01_RS09170	COG2188	Transcriptional regulator
DPADHS01_RS09175	COG3624	Phosphonate C-P lyase system protein PhnG
DPADHS01_RS09185	COG3626	phosphonate metabolism
DPADHS01_RS09190	COG3627	carbon phosphorus lyase activity
DPADHS01_RS09195	COG4107	phosphonate C-P lyase system protein PhnK
DPADHS01_RS09200	COG4778	phosphonate C-P lyase system protein PhnL
DPADHS01_RS09205	COG3454	Phosphonate metabolism
DPADHS01_RS09215	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DPADHS01_RS09305	COG0697	spore germination
DPADHS01_RS09330	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DPADHS01_RS09350	COG0835	chemotaxis
DPADHS01_RS09350	COG0784	Response regulator, receiver
DPADHS01_RS09365	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS09375	COG0514	ATP-dependent DNA helicase (RecQ)
DPADHS01_RS09380	COG2203	Gaf domain
DPADHS01_RS09380	COG3706	GGDEF domain
DPADHS01_RS09380	COG4251	negative regulation of phosphorylation
DPADHS01_RS09380	COG5001	Diguanylate cyclase
DPADHS01_RS09400	COG1752	Esterase of the alpha-beta hydrolase superfamily
DPADHS01_RS09440	COG2124	cytochrome p450
DPADHS01_RS09445	COG4221	oxidoreductase activity
DPADHS01_RS09490	COG0583	DNA-binding transcription factor activity
DPADHS01_RS09520	COG3639	organic phosphonate transmembrane transporter activity
DPADHS01_RS09530	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DPADHS01_RS09535	COG2084	Dehydrogenase
DPADHS01_RS09550	COG0589	response to stress
DPADHS01_RS09590	COG2814	Major facilitator Superfamily
DPADHS01_RS09595	COG2030	dehydratase
DPADHS01_RS09600	COG2267	carboxylic ester hydrolase activity
DPADHS01_RS09605	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS09610	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS09620	COG1643	Atp-dependent helicase
DPADHS01_RS09630	COG0537	adenosine 5'-monophosphoramidase activity
DPADHS01_RS09680	COG1595	DNA-templated transcription, initiation
DPADHS01_RS09750	COG1201	RNA secondary structure unwinding
DPADHS01_RS09755	COG2205	protein histidine kinase activity
DPADHS01_RS09755	COG0784	Response regulator, receiver
DPADHS01_RS09770	COG4772	TonB-dependent receptor
DPADHS01_RS09785	COG2076	Multidrug Resistance protein
DPADHS01_RS09790	COG0385	Bile acid
DPADHS01_RS09840	COG2200	EAL domain
DPADHS01_RS09850	COG3321	synthase
DPADHS01_RS09850	COG0604	alcohol dehydrogenase
DPADHS01_RS09855	COG0560	Phosphoserine phosphatase
DPADHS01_RS09870	COG1176	ABC-type spermidine putrescine transport system, permease component I
DPADHS01_RS09900	COG0564	pseudouridine synthase activity
DPADHS01_RS09910	COG2894	cell division
DPADHS01_RS09920	COG1560	Kdo2-lipid A biosynthetic process
DPADHS01_RS09935	COG2853	Lipoprotein
DPADHS01_RS09955	COG3162	membrane
DPADHS01_RS09960	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DPADHS01_RS09990	COG1132	(ABC) transporter
DPADHS01_RS10000	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DPADHS01_RS10025	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DPADHS01_RS10040	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS10040	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DPADHS01_RS10070	COG1127	ABC transporter
DPADHS01_RS10075	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DPADHS01_RS10080	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DPADHS01_RS10085	COG0727	PFAM Uncharacterised protein family (UPF0153)
DPADHS01_RS10090	COG0778	Nitroreductase
DPADHS01_RS10110	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS10120	COG2350	Protein conserved in bacteria
DPADHS01_RS10130	COG0613	PHP domain protein
DPADHS01_RS10135	COG0009	L-threonylcarbamoyladenylate synthase
DPADHS01_RS10145	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DPADHS01_RS10190	COG1175	transmembrane transport
DPADHS01_RS10195	COG0395	ABC-type sugar transport system, permease component
DPADHS01_RS10200	COG3842	ATPase activity
DPADHS01_RS10210	COG0676	glucose-6-phosphate 1-epimerase activity
DPADHS01_RS10255	COG0786	glutamate:sodium symporter activity
DPADHS01_RS10270	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS10285	COG0402	S-adenosylhomocysteine deaminase activity
DPADHS01_RS10315	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
DPADHS01_RS10365	COG0367	asparagine synthase
DPADHS01_RS10370	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS10375	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS10385	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DPADHS01_RS10425	COG0583	DNA-binding transcription factor activity
DPADHS01_RS10460	COG0596	Alpha beta hydrolase
DPADHS01_RS10465	COG0800	Aldolase
DPADHS01_RS10480	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS10500	COG0583	DNA-binding transcription factor activity
DPADHS01_RS10505	COG0251	oxidation-reduction process
DPADHS01_RS10525	COG2226	methyltransferase
DPADHS01_RS10565	COG0285	dihydrofolate synthase activity
DPADHS01_RS10570	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DPADHS01_RS10575	COG1286	toxin biosynthetic process
DPADHS01_RS10675	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS10675	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS10700	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DPADHS01_RS10710	COG3139	Protein of unknown function (DUF1315)
DPADHS01_RS10720	COG0308	aminopeptidase N
DPADHS01_RS10750	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS10785	COG0714	Associated with various cellular activities
DPADHS01_RS10805	COG1335	isochorismatase
DPADHS01_RS10815	COG2342	PFAM TM1410 hypothetical-related protein
DPADHS01_RS10840	COG0297	glycogen (starch) synthase activity
DPADHS01_RS10890	COG3130	regulation of translation
DPADHS01_RS10900	COG2027	D-alanyl-D-alanine carboxypeptidase
DPADHS01_RS10905	COG3171	Protein conserved in bacteria
DPADHS01_RS10910	COG2197	response regulator
DPADHS01_RS10915	COG2205	protein histidine kinase activity
DPADHS01_RS10915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS10940	COG0004	ammonium transporteR
DPADHS01_RS10950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DPADHS01_RS10960	COG0625	glutathione transferase activity
DPADHS01_RS10965	COG1309	transcriptional regulator
DPADHS01_RS10995	COG0521	Mo-molybdopterin cofactor biosynthetic process
DPADHS01_RS11015	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DPADHS01_RS11020	COG1070	Carbohydrate kinase
DPADHS01_RS11040	COG0741	lytic transglycosylase activity
DPADHS01_RS11045	COG0488	(ABC) transporter
DPADHS01_RS11055	COG0589	response to stress
DPADHS01_RS11130	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DPADHS01_RS11140	COG1113	amino acid transport
DPADHS01_RS11175	COG1477	protein flavinylation
DPADHS01_RS11190	COG0584	glycerophosphoryl diester phosphodiesterase
DPADHS01_RS11205	COG4591	ABC-type transport system involved in lipoprotein release permease component
DPADHS01_RS11225	COG2333	competence protein COMEC
DPADHS01_RS11225	COG0658	competence protein
DPADHS01_RS11230	COG0811	peptide transport
DPADHS01_RS11235	COG0848	biopolymer transport protein
DPADHS01_RS11255	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DPADHS01_RS11265	COG1530	ribonuclease E activity
DPADHS01_RS11275	COG0546	phosphoglycolate phosphatase activity
DPADHS01_RS11280	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DPADHS01_RS11280	COG0616	signal peptide processing
DPADHS01_RS11290	COG1399	metal-binding, possibly nucleic acid-binding protein
DPADHS01_RS11320	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DPADHS01_RS11330	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DPADHS01_RS11350	COG0084	hydrolase, TatD family'
DPADHS01_RS11435	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DPADHS01_RS11450	COG0183	Belongs to the thiolase family
DPADHS01_RS11460	COG2233	PERMEase
DPADHS01_RS11470	COG3038	cytochrome b561
DPADHS01_RS11490	COG2814	Major facilitator Superfamily
DPADHS01_RS11495	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS11500	COG1309	transcriptional regulator
DPADHS01_RS11535	COG4160	amino acid transport
DPADHS01_RS11540	COG4215	(ABC) transporter
DPADHS01_RS11545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS11550	COG1473	amidohydrolase
DPADHS01_RS11555	COG0583	DNA-binding transcription factor activity
DPADHS01_RS11560	COG0840	transmembrane signaling receptor activity
DPADHS01_RS11590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DPADHS01_RS11600	COG1120	ATPase activity
DPADHS01_RS11630	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DPADHS01_RS11660	COG3047	cAMP biosynthetic process
DPADHS01_RS11660	COG2885	chlorophyll binding
DPADHS01_RS11665	COG2197	response regulator
DPADHS01_RS11675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DPADHS01_RS11680	COG1595	DNA-templated transcription, initiation
DPADHS01_RS11695	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS11710	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
DPADHS01_RS11715	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS11720	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DPADHS01_RS11735	COG1309	transcriptional regulator
DPADHS01_RS11765	COG0583	DNA-binding transcription factor activity
DPADHS01_RS11775	COG0583	DNA-binding transcription factor activity
DPADHS01_RS11785	COG0714	Associated with various cellular activities
DPADHS01_RS11830	COG0084	hydrolase, TatD family'
DPADHS01_RS11835	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
DPADHS01_RS11840	COG2259	Doxx family
DPADHS01_RS11855	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DPADHS01_RS11870	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DPADHS01_RS11875	COG4181	ATPase activity
DPADHS01_RS11915	COG1764	response to oxidative stress
DPADHS01_RS11920	COG1846	Transcriptional regulator
DPADHS01_RS11925	COG0583	DNA-binding transcription factor activity
DPADHS01_RS11935	COG0583	DNA-binding transcription factor activity
DPADHS01_RS11945	COG3214	Protein conserved in bacteria
DPADHS01_RS11950	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
DPADHS01_RS11960	COG1024	Enoyl-CoA hydratase
DPADHS01_RS11970	COG3384	dioxygenase
DPADHS01_RS12010	COG2866	Carboxypeptidase
DPADHS01_RS12025	COG0436	Aminotransferase
DPADHS01_RS12035	COG0386	Belongs to the glutathione peroxidase family
DPADHS01_RS12040	COG1846	Transcriptional regulator
DPADHS01_RS12045	COG0784	Response regulator, receiver
DPADHS01_RS12045	COG2205	protein histidine kinase activity
DPADHS01_RS12045	COG5002	protein histidine kinase activity
DPADHS01_RS12050	COG2255	four-way junction helicase activity
DPADHS01_RS12055	COG1956	GAF domain-containing protein
DPADHS01_RS12060	COG0625	glutathione transferase activity
DPADHS01_RS12155	COG0625	glutathione transferase activity
DPADHS01_RS12160	COG1131	(ABC) transporter
DPADHS01_RS12165	COG0842	Transport permease protein
DPADHS01_RS12210	COG2188	Transcriptional regulator
DPADHS01_RS12220	COG2853	Lipoprotein
DPADHS01_RS12230	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS12405	COG1783	phage Terminase large subunit
DPADHS01_RS12550	COG5434	Belongs to the glycosyl hydrolase 28 family
DPADHS01_RS12580	COG3655	Transcriptional regulator
DPADHS01_RS12620	COG2116	formate transmembrane transporter activity
DPADHS01_RS12625	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS12680	COG1051	belongs to the nudix hydrolase family
DPADHS01_RS12690	COG1024	Enoyl-CoA hydratase
DPADHS01_RS12690	COG1250	3-hydroxyacyl-CoA dehydrogenase
DPADHS01_RS12700	COG2837	iron assimilation
DPADHS01_RS12785	COG1238	metal cluster binding
DPADHS01_RS12795	COG1295	ribonuclease BN
DPADHS01_RS12825	COG0024	Methionine aminopeptidase
DPADHS01_RS12915	COG1309	transcriptional regulator
DPADHS01_RS12920	COG2130	NADP-dependent
DPADHS01_RS12935	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DPADHS01_RS12935	COG2010	Cytochrome c
DPADHS01_RS12940	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DPADHS01_RS12950	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
DPADHS01_RS12955	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DPADHS01_RS12965	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DPADHS01_RS12970	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS12980	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS12985	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS12990	COG0778	Nitroreductase
DPADHS01_RS13005	COG1979	alcohol dehydrogenase
DPADHS01_RS13010	COG2003	Belongs to the UPF0758 family
DPADHS01_RS13050	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
DPADHS01_RS13055	COG0732	type I restriction modification DNA specificity domain
DPADHS01_RS13070	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DPADHS01_RS13120	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
DPADHS01_RS13120	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
DPADHS01_RS13130	COG0542	response to heat
DPADHS01_RS13165	COG0789	Transcriptional regulator
DPADHS01_RS13175	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS13175	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS13180	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
DPADHS01_RS13185	COG0243	molybdopterin cofactor binding
DPADHS01_RS13205	COG1280	lysine exporter protein (LysE YggA)
DPADHS01_RS13220	COG0542	response to heat
DPADHS01_RS13290	COG1607	acyl-coa hydrolase
DPADHS01_RS13295	COG1959	2 iron, 2 sulfur cluster binding
DPADHS01_RS13305	COG2819	hydrolase of the alpha beta superfamily
DPADHS01_RS13350	COG0583	DNA-binding transcription factor activity
DPADHS01_RS13360	COG4106	trans-aconitate 2-methyltransferase activity
DPADHS01_RS13370	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DPADHS01_RS13375	COG1459	type II secretion system
DPADHS01_RS13385	COG2165	general secretion pathway protein
DPADHS01_RS13425	COG0720	synthase
DPADHS01_RS13430	COG3604	Transcriptional regulator
DPADHS01_RS13490	COG0840	transmembrane signaling receptor activity
DPADHS01_RS13495	COG2056	Na+-H+ antiporter family
DPADHS01_RS13510	COG2226	methyltransferase
DPADHS01_RS13605	COG2153	protein acetylation
DPADHS01_RS13610	COG2850	peptidyl-arginine hydroxylation
DPADHS01_RS13650	COG1278	Cold shock
DPADHS01_RS13660	COG0542	response to heat
DPADHS01_RS13665	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DPADHS01_RS13680	COG0492	ferredoxin-NADP+ reductase activity
DPADHS01_RS13695	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DPADHS01_RS13710	COG0435	Glutathione S-transferase
DPADHS01_RS13715	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DPADHS01_RS13720	COG2920	part of a sulfur-relay system
DPADHS01_RS13760	COG0583	DNA-binding transcription factor activity
DPADHS01_RS13765	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DPADHS01_RS13770	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS13780	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS13785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS13795	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS13810	COG2197	response regulator
DPADHS01_RS13815	COG4771	TonB-dependent receptor
DPADHS01_RS13855	COG0582	viral genome integration into host DNA
DPADHS01_RS13860	COG2837	iron assimilation
DPADHS01_RS13870	COG0583	DNA-binding transcription factor activity
DPADHS01_RS13925	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
DPADHS01_RS13930	COG1252	NADH dehydrogenase
DPADHS01_RS13935	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DPADHS01_RS13940	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DPADHS01_RS13940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DPADHS01_RS13995	COG2003	Belongs to the UPF0758 family
DPADHS01_RS14180	COG0270	DNA (cytosine-5-)-methyltransferase activity
DPADHS01_RS14190	COG0629	single-stranded DNA binding
DPADHS01_RS14240	COG2205	protein histidine kinase activity
DPADHS01_RS14240	COG0784	Response regulator, receiver
DPADHS01_RS14240	COG2198	Histidine kinase
DPADHS01_RS14240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS14260	COG2249	NAD(P)H dehydrogenase (quinone) activity
DPADHS01_RS14275	COG1522	sequence-specific DNA binding
DPADHS01_RS14305	COG4191	Histidine kinase
DPADHS01_RS14330	COG5001	Diguanylate cyclase
DPADHS01_RS14330	COG4251	negative regulation of phosphorylation
DPADHS01_RS14330	COG3706	GGDEF domain
DPADHS01_RS14330	COG2203	Gaf domain
DPADHS01_RS14340	COG0659	secondary active sulfate transmembrane transporter activity
DPADHS01_RS14385	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DPADHS01_RS14395	COG0183	Belongs to the thiolase family
DPADHS01_RS14400	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS14450	COG0729	surface antigen
DPADHS01_RS14460	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DPADHS01_RS14465	COG2267	carboxylic ester hydrolase activity
DPADHS01_RS14470	COG0671	phosphoesterase, PA-phosphatase related
DPADHS01_RS14470	COG2453	phosphatase
DPADHS01_RS14485	COG4589	Belongs to the CDS family
DPADHS01_RS14490	COG0667	Aldo Keto reductase
DPADHS01_RS14500	COG1115	amino acid carrier protein
DPADHS01_RS14510	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DPADHS01_RS14530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS14535	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS14540	COG1538	Outer membrane efflux protein
DPADHS01_RS14600	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DPADHS01_RS14600	COG0543	2 iron, 2 sulfur cluster binding
DPADHS01_RS14605	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DPADHS01_RS14610	COG4638	Rieske (2fe-2S)
DPADHS01_RS14625	COG4948	Mandelate Racemase Muconate Lactonizing
DPADHS01_RS14635	COG3485	protocatechuate 3,4-dioxygenase
DPADHS01_RS14670	COG2807	transmembrane transport
DPADHS01_RS14675	COG0590	tRNA wobble adenosine to inosine editing
DPADHS01_RS14690	COG2318	DinB family
DPADHS01_RS14750	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DPADHS01_RS14755	COG2863	cytochrome
DPADHS01_RS14760	COG3258	Cytochrome c
DPADHS01_RS14765	COG0642	Histidine kinase
DPADHS01_RS14800	COG0625	glutathione transferase activity
DPADHS01_RS14820	COG0583	DNA-binding transcription factor activity
DPADHS01_RS14825	COG1595	DNA-templated transcription, initiation
DPADHS01_RS14830	COG3712	iron ion homeostasis
DPADHS01_RS14870	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DPADHS01_RS14880	COG2382	esterase
DPADHS01_RS14900	COG0583	DNA-binding transcription factor activity
DPADHS01_RS14920	COG1760	l-serine dehydratase
DPADHS01_RS14925	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DPADHS01_RS14960	COG2217	Heavy metal translocating P-type atpase
DPADHS01_RS14975	COG0583	DNA-binding transcription factor activity
DPADHS01_RS14990	COG1566	PFAM secretion protein HlyD family protein
DPADHS01_RS15050	COG1335	isochorismatase
DPADHS01_RS15055	COG1335	isochorismatase
DPADHS01_RS15065	COG0583	DNA-binding transcription factor activity
DPADHS01_RS15105	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DPADHS01_RS15110	COG1121	(ABC) transporter
DPADHS01_RS15200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS15225	COG0735	belongs to the Fur family
DPADHS01_RS15235	COG1304	FMN binding
DPADHS01_RS15265	COG4566	intracellular signal transduction
DPADHS01_RS15355	COG3829	transcription factor binding
DPADHS01_RS15380	COG3829	transcription factor binding
DPADHS01_RS15385	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DPADHS01_RS15390	COG0584	glycerophosphoryl diester phosphodiesterase
DPADHS01_RS15395	COG2011	ABC-type metal ion transport system permease component
DPADHS01_RS15405	COG1464	Belongs to the NlpA lipoprotein family
DPADHS01_RS15430	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DPADHS01_RS15435	COG1070	Carbohydrate kinase
DPADHS01_RS15440	COG0246	Mannitol dehydrogenase
DPADHS01_RS15455	COG1175	transmembrane transport
DPADHS01_RS15475	COG4771	TonB-dependent receptor
DPADHS01_RS15490	COG4977	sequence-specific DNA binding
DPADHS01_RS15490	COG1917	Cupin 2, conserved barrel domain protein
DPADHS01_RS15505	COG1116	anion transmembrane transporter activity
DPADHS01_RS15510	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DPADHS01_RS15515	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS15535	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS15545	COG3265	gluconokinase activity
DPADHS01_RS15550	COG1609	Transcriptional regulator
DPADHS01_RS15560	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS15565	COG0583	DNA-binding transcription factor activity
DPADHS01_RS15585	COG1396	sequence-specific DNA binding
DPADHS01_RS15595	COG2175	clavaminate synthase activity
DPADHS01_RS15605	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DPADHS01_RS15610	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS15635	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DPADHS01_RS15635	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DPADHS01_RS15645	COG3469	chitinase activity
DPADHS01_RS15650	COG2188	Transcriptional regulator
DPADHS01_RS15655	COG1053	succinate dehydrogenase
DPADHS01_RS15670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DPADHS01_RS15700	COG4772	TonB-dependent receptor
DPADHS01_RS15745	COG0431	NADPH-dependent FMN reductase
DPADHS01_RS15750	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DPADHS01_RS15760	COG0640	Transcriptional regulator
DPADHS01_RS15765	COG2207	Transcriptional regulator
DPADHS01_RS15770	COG1064	alcohol dehydrogenase
DPADHS01_RS15795	COG1309	transcriptional regulator
DPADHS01_RS15805	COG2329	Antibiotic biosynthesis monooxygenase
DPADHS01_RS15840	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DPADHS01_RS15850	COG1609	Transcriptional regulator
DPADHS01_RS15880	COG0252	asparaginase activity
DPADHS01_RS15885	COG1115	amino acid carrier protein
DPADHS01_RS15930	COG1053	succinate dehydrogenase
DPADHS01_RS15940	COG0728	peptidoglycan biosynthetic process
DPADHS01_RS16000	COG2258	MOSC domain
DPADHS01_RS16075	COG2217	Heavy metal translocating P-type atpase
DPADHS01_RS16080	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DPADHS01_RS16085	COG1074	ATP-dependent DNA helicase activity
DPADHS01_RS16120	COG2132	Multicopper oxidase
DPADHS01_RS16160	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS16165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS16195	COG4644	lycopene metabolic process
DPADHS01_RS16210	COG2963	transposase activity
DPADHS01_RS16220	COG2508	Transcriptional regulator
DPADHS01_RS16230	COG4447	cellulose binding
DPADHS01_RS16235	COG2409	Drug exporters of the RND superfamily
DPADHS01_RS16255	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS16270	COG2072	flavoprotein involved in K transport
DPADHS01_RS16285	COG0531	amino acid
DPADHS01_RS16290	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS16295	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DPADHS01_RS16310	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DPADHS01_RS16315	COG3162	membrane
DPADHS01_RS16320	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS16325	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS16355	COG3008	intermembrane lipid transfer
DPADHS01_RS16360	COG2995	paraquat-inducible protein a
DPADHS01_RS16365	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS16375	COG4948	Mandelate Racemase Muconate Lactonizing
DPADHS01_RS16380	COG2271	Major facilitator Superfamily
DPADHS01_RS16395	COG3618	amidohydrolase
DPADHS01_RS16400	COG2271	Major facilitator Superfamily
DPADHS01_RS16435	COG0765	amino acid transport
DPADHS01_RS16440	COG0765	amino acid transport
DPADHS01_RS16455	COG2084	Dehydrogenase
DPADHS01_RS16465	COG2130	NADP-dependent
DPADHS01_RS16470	COG1309	transcriptional regulator
DPADHS01_RS16490	COG0366	Alpha amylase catalytic
DPADHS01_RS16495	COG0517	IMP dehydrogenase activity
DPADHS01_RS16515	COG1063	alcohol dehydrogenase
DPADHS01_RS16530	COG3546	catalase activity
DPADHS01_RS16535	COG3685	Protein conserved in bacteria
DPADHS01_RS16560	COG2890	protein-(glutamine-N5) methyltransferase activity
DPADHS01_RS16575	COG0784	Response regulator, receiver
DPADHS01_RS16575	COG4191	Histidine kinase
DPADHS01_RS16605	COG1363	Peptidase, m42
DPADHS01_RS16645	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DPADHS01_RS16685	COG3568	Endonuclease Exonuclease Phosphatase
DPADHS01_RS16695	COG0392	lysyltransferase activity
DPADHS01_RS16705	COG0366	Alpha amylase catalytic
DPADHS01_RS16725	COG1285	pathogenesis
DPADHS01_RS16745	COG0058	SHG alpha-glucan phosphorylase activity
DPADHS01_RS16760	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS16765	COG1546	Belongs to the CinA family
DPADHS01_RS16795	COG2323	membrane
DPADHS01_RS16815	COG3121	Chaperone
DPADHS01_RS16825	COG3188	usher protein
DPADHS01_RS16830	COG3121	Chaperone
DPADHS01_RS16850	COG1475	DNA binding
DPADHS01_RS16855	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS16860	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
DPADHS01_RS16865	COG0583	DNA-binding transcription factor activity
DPADHS01_RS16885	COG1063	alcohol dehydrogenase
DPADHS01_RS16895	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DPADHS01_RS16895	COG2169	Transcriptional regulator
DPADHS01_RS16910	COG0583	DNA-binding transcription factor activity
DPADHS01_RS16915	COG2814	Major facilitator Superfamily
DPADHS01_RS16935	COG1984	allophanate hydrolase subunit 2
DPADHS01_RS16945	COG0028	Belongs to the TPP enzyme family
DPADHS01_RS16955	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DPADHS01_RS16960	COG1045	serine acetyltransferase
DPADHS01_RS16965	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DPADHS01_RS16985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DPADHS01_RS16990	COG0300	oxidoreductase activity
DPADHS01_RS17025	COG2814	Major facilitator Superfamily
DPADHS01_RS17035	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DPADHS01_RS17055	COG0596	Alpha beta hydrolase
DPADHS01_RS17060	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
DPADHS01_RS17065	COG0367	asparagine synthase
DPADHS01_RS17075	COG1522	sequence-specific DNA binding
DPADHS01_RS17090	COG1113	amino acid transport
DPADHS01_RS17095	COG2010	Cytochrome c
DPADHS01_RS17100	COG2010	Cytochrome c
DPADHS01_RS17120	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DPADHS01_RS17120	COG3153	acetyltransferase
DPADHS01_RS17125	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DPADHS01_RS17130	COG5001	Diguanylate cyclase
DPADHS01_RS17140	COG4206	TonB-dependent receptor
DPADHS01_RS17145	COG2192	nodulation
DPADHS01_RS17150	COG2814	Major facilitator Superfamily
DPADHS01_RS17180	COG1104	cysteine desulfurase activity
DPADHS01_RS17185	COG4172	Belongs to the ABC transporter superfamily
DPADHS01_RS17190	COG4239	(ABC) transporter, permease
DPADHS01_RS17195	COG4174	ABC transporter (Permease)
DPADHS01_RS17205	COG4771	TonB-dependent receptor
DPADHS01_RS17220	COG0583	DNA-binding transcription factor activity
DPADHS01_RS17240	COG1595	DNA-templated transcription, initiation
DPADHS01_RS17255	COG2207	Transcriptional regulator
DPADHS01_RS17275	COG0564	pseudouridine synthase activity
DPADHS01_RS17285	COG0531	amino acid
DPADHS01_RS17290	COG0174	glutamine synthetase
DPADHS01_RS17315	COG0028	Belongs to the TPP enzyme family
DPADHS01_RS17330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DPADHS01_RS17350	COG1522	sequence-specific DNA binding
DPADHS01_RS17395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS17400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS17410	COG3204	pilus organization
DPADHS01_RS17415	COG0789	Transcriptional regulator
DPADHS01_RS17420	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS17425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
DPADHS01_RS17455	COG0179	Fumarylacetoacetate (FAA) hydrolase
DPADHS01_RS17465	COG2271	Major facilitator Superfamily
DPADHS01_RS17470	COG3290	protein histidine kinase activity
DPADHS01_RS17470	COG3829	transcription factor binding
DPADHS01_RS17475	COG2610	gluconate transmembrane transporter activity
DPADHS01_RS17480	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS17485	COG2031	fatty acid transporter
DPADHS01_RS17500	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DPADHS01_RS17505	COG0583	DNA-binding transcription factor activity
DPADHS01_RS17510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
DPADHS01_RS17515	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS17535	COG2205	protein histidine kinase activity
DPADHS01_RS17600	COG3851	Histidine kinase
DPADHS01_RS17615	COG2205	protein histidine kinase activity
DPADHS01_RS17615	COG0784	Response regulator, receiver
DPADHS01_RS17635	COG2194	sulfuric ester hydrolase activity
DPADHS01_RS17765	COG3772	lysozyme
DPADHS01_RS17965	COG0488	(ABC) transporter
DPADHS01_RS17980	COG0583	DNA-binding transcription factor activity
DPADHS01_RS17985	COG1278	Cold shock
DPADHS01_RS18035	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DPADHS01_RS18040	COG1609	Transcriptional regulator
DPADHS01_RS18045	COG1172	Belongs to the binding-protein-dependent transport system permease family
DPADHS01_RS18050	COG1129	ABC transporter
DPADHS01_RS18075	COG2010	Cytochrome c
DPADHS01_RS18080	COG0753	catalase activity
DPADHS01_RS18110	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DPADHS01_RS18115	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
DPADHS01_RS18120	COG2080	2 iron, 2 sulfur cluster binding
DPADHS01_RS18145	COG1944	ATP diphosphatase activity
DPADHS01_RS18165	COG4771	TonB-dependent receptor
DPADHS01_RS18170	COG0275	rRNA processing
DPADHS01_RS18175	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DPADHS01_RS18175	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DPADHS01_RS18190	COG0579	oxidoreductase
DPADHS01_RS18220	COG1595	DNA-templated transcription, initiation
DPADHS01_RS18225	COG3712	iron ion homeostasis
DPADHS01_RS18245	COG2814	Major facilitator Superfamily
DPADHS01_RS18295	COG2197	response regulator
DPADHS01_RS18320	COG2366	antibiotic biosynthetic process
DPADHS01_RS18335	COG0625	glutathione transferase activity
DPADHS01_RS18360	COG0417	DNA replication proofreading
DPADHS01_RS18405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS18475	COG1309	transcriptional regulator
DPADHS01_RS18495	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
DPADHS01_RS18500	COG0583	DNA-binding transcription factor activity
DPADHS01_RS18510	COG2354	Protein conserved in bacteria
DPADHS01_RS18515	COG3278	Belongs to the heme-copper respiratory oxidase family
DPADHS01_RS18525	COG2239	Acts as a magnesium transporter
DPADHS01_RS18540	COG5001	Diguanylate cyclase
DPADHS01_RS18540	COG4251	negative regulation of phosphorylation
DPADHS01_RS18540	COG3706	GGDEF domain
DPADHS01_RS18540	COG2203	Gaf domain
DPADHS01_RS18545	COG4977	sequence-specific DNA binding
DPADHS01_RS18550	COG3813	Protein conserved in bacteria
DPADHS01_RS18615	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DPADHS01_RS18640	COG0604	alcohol dehydrogenase
DPADHS01_RS18645	COG0616	signal peptide processing
DPADHS01_RS18665	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS18670	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS18675	COG0583	DNA-binding transcription factor activity
DPADHS01_RS18700	COG1024	Enoyl-CoA hydratase
DPADHS01_RS18710	COG0531	amino acid
DPADHS01_RS18725	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DPADHS01_RS18745	COG1388	LysM domain
DPADHS01_RS18745	COG0741	lytic transglycosylase activity
DPADHS01_RS18750	COG4166	transmembrane transport
DPADHS01_RS18755	COG4166	transmembrane transport
DPADHS01_RS18760	COG4174	ABC transporter (Permease)
DPADHS01_RS18765	COG4239	(ABC) transporter, permease
DPADHS01_RS18770	COG4172	Belongs to the ABC transporter superfamily
DPADHS01_RS18780	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS18795	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DPADHS01_RS18815	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS18820	COG2205	protein histidine kinase activity
DPADHS01_RS18825	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DPADHS01_RS18865	COG3617	BRO family, N-terminal domain
DPADHS01_RS18870	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
DPADHS01_RS18940	COG0740	serine-type endopeptidase activity
DPADHS01_RS18945	COG4695	Portal protein
DPADHS01_RS18950	COG4626	Terminase
DPADHS01_RS18950	COG1802	Transcriptional regulator
DPADHS01_RS19050	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DPADHS01_RS19105	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DPADHS01_RS19260	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DPADHS01_RS19280	COG0589	response to stress
DPADHS01_RS19300	COG2201	protein-glutamate methylesterase activity
DPADHS01_RS19310	COG2223	nitrite transmembrane transporter activity
DPADHS01_RS19315	COG0515	serine threonine protein kinase
DPADHS01_RS19320	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DPADHS01_RS19325	COG2146	nitrite reductase [NAD(P)H] activity
DPADHS01_RS19330	COG0243	molybdopterin cofactor binding
DPADHS01_RS19350	COG0668	transmembrane transport
DPADHS01_RS19390	COG0189	ligase activity
DPADHS01_RS19390	COG4067	protein conserved in archaea
DPADHS01_RS19430	COG2909	trisaccharide binding
DPADHS01_RS19435	COG2909	trisaccharide binding
DPADHS01_RS19470	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DPADHS01_RS19525	COG0519	Catalyzes the synthesis of GMP from XMP
DPADHS01_RS19540	COG0667	Aldo Keto reductase
DPADHS01_RS19555	COG0183	Belongs to the thiolase family
DPADHS01_RS19580	COG1305	Transglutaminase-like
DPADHS01_RS19590	COG2308	Evidence 4 Homologs of previously reported genes of
DPADHS01_RS19595	COG0505	Belongs to the CarA family
DPADHS01_RS19615	COG1317	bacterial-type flagellum organization
DPADHS01_RS19725	COG4789	Type iii secretion
DPADHS01_RS19775	COG4790	Type iii secretion
DPADHS01_RS19780	COG4794	Type iii secretion
DPADHS01_RS19785	COG4791	protein targeting
DPADHS01_RS19790	COG4792	protein secretion
DPADHS01_RS19870	COG2840	Smr protein MutS2
DPADHS01_RS19890	COG2815	serine threonine protein kinase
DPADHS01_RS19890	COG0515	serine threonine protein kinase
DPADHS01_RS19930	COG2204	response regulator
DPADHS01_RS19970	COG0625	glutathione transferase activity
DPADHS01_RS19975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DPADHS01_RS19990	COG3135	benzoate transporter
DPADHS01_RS20005	COG2130	NADP-dependent
DPADHS01_RS20025	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DPADHS01_RS20065	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS20070	COG2205	protein histidine kinase activity
DPADHS01_RS20095	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS20105	COG1024	Enoyl-CoA hydratase
DPADHS01_RS20110	COG1250	3-hydroxyacyl-CoA dehydrogenase
DPADHS01_RS20115	COG2186	Transcriptional regulator
DPADHS01_RS20120	COG2807	transmembrane transport
DPADHS01_RS20125	COG0628	permease
DPADHS01_RS20135	COG0625	glutathione transferase activity
DPADHS01_RS20165	COG1022	Amp-dependent synthetase and ligase
DPADHS01_RS20195	COG2205	protein histidine kinase activity
DPADHS01_RS20195	COG0784	Response regulator, receiver
DPADHS01_RS20195	COG5002	protein histidine kinase activity
DPADHS01_RS20235	COG1846	Transcriptional regulator
DPADHS01_RS20240	COG2080	2 iron, 2 sulfur cluster binding
DPADHS01_RS20245	COG2010	Cytochrome c
DPADHS01_RS20245	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DPADHS01_RS20250	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DPADHS01_RS20250	COG2010	Cytochrome c
DPADHS01_RS20255	COG2207	Transcriptional regulator
DPADHS01_RS20330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DPADHS01_RS20335	COG1053	succinate dehydrogenase
DPADHS01_RS20340	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DPADHS01_RS20345	COG2009	succinate dehydrogenase
DPADHS01_RS20375	COG3846	protein secretion by the type IV secretion system
DPADHS01_RS20390	COG3451	type IV secretory pathway VirB4
DPADHS01_RS20400	COG3838	Conjugal transfer protein Trbc
DPADHS01_RS20405	COG4962	Type ii secretion system protein e
DPADHS01_RS20435	COG2076	Multidrug Resistance protein
DPADHS01_RS20440	COG0583	DNA-binding transcription factor activity
DPADHS01_RS20470	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DPADHS01_RS20475	COG1127	ABC transporter
DPADHS01_RS20495	COG4959	Type IV secretory pathway protease TraF
DPADHS01_RS20540	COG5489	Protein of unknown function (DUF736)
DPADHS01_RS20550	COG1475	DNA binding
DPADHS01_RS20565	COG2003	Belongs to the UPF0758 family
DPADHS01_RS20570	COG4804	nuclease activity
DPADHS01_RS20600	COG2084	Dehydrogenase
DPADHS01_RS20615	COG3738	Protein conserved in bacteria
DPADHS01_RS20640	COG0251	oxidation-reduction process
DPADHS01_RS20645	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS20650	COG0174	glutamine synthetase
DPADHS01_RS20655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS20675	COG0840	transmembrane signaling receptor activity
DPADHS01_RS20690	COG3278	Belongs to the heme-copper respiratory oxidase family
DPADHS01_RS20705	COG2010	Cytochrome c
DPADHS01_RS20710	COG3278	Belongs to the heme-copper respiratory oxidase family
DPADHS01_RS20725	COG2010	Cytochrome c
DPADHS01_RS20730	COG0348	domain, Protein
DPADHS01_RS20740	COG2217	Heavy metal translocating P-type atpase
DPADHS01_RS20780	COG2076	Multidrug Resistance protein
DPADHS01_RS20810	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS20825	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DPADHS01_RS20855	COG1196	nuclear chromosome segregation
DPADHS01_RS20875	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DPADHS01_RS20885	COG0402	S-adenosylhomocysteine deaminase activity
DPADHS01_RS20890	COG1247	-acetyltransferase
DPADHS01_RS20905	COG2963	transposase activity
DPADHS01_RS20910	COG2801	Transposase and inactivated derivatives
DPADHS01_RS20925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DPADHS01_RS20930	COG0384	phenazine biosynthesis protein PhzF
DPADHS01_RS20960	COG5006	permease, DMT superfamily
DPADHS01_RS20975	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DPADHS01_RS20990	COG3795	YCII-related domain
DPADHS01_RS21000	COG2814	Major facilitator Superfamily
DPADHS01_RS21005	COG4941	Belongs to the sigma-70 factor family
DPADHS01_RS21015	COG3795	YCII-related domain
DPADHS01_RS21025	COG2197	response regulator
DPADHS01_RS21030	COG1982	Orn Lys Arg decarboxylase major
DPADHS01_RS21035	COG0189	ligase activity
DPADHS01_RS21040	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS21055	COG0765	amino acid transport
DPADHS01_RS21060	COG0765	amino acid transport
DPADHS01_RS21065	COG1126	abc transporter atp-binding protein
DPADHS01_RS21090	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS21105	COG1253	flavin adenine dinucleotide binding
DPADHS01_RS21110	COG0300	oxidoreductase activity
DPADHS01_RS21120	COG0583	DNA-binding transcription factor activity
DPADHS01_RS21125	COG1864	DNA RNA non-specific endonuclease
DPADHS01_RS21125	COG3591	Belongs to the peptidase S1B family
DPADHS01_RS21130	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DPADHS01_RS21135	COG4319	ketosteroid isomerase
DPADHS01_RS21150	COG4774	siderophore transport
DPADHS01_RS21195	COG2814	Major facilitator Superfamily
DPADHS01_RS21215	COG0583	DNA-binding transcription factor activity
DPADHS01_RS21225	COG0121	glutamine amidotransferase
DPADHS01_RS21255	COG3712	iron ion homeostasis
DPADHS01_RS21260	COG1595	DNA-templated transcription, initiation
DPADHS01_RS21275	COG1230	cation diffusion facilitator family transporter
DPADHS01_RS21280	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DPADHS01_RS21305	COG2252	PERMEase
DPADHS01_RS21365	COG2233	PERMEase
DPADHS01_RS21380	COG1309	transcriptional regulator
DPADHS01_RS21390	COG3960	tartronate-semialdehyde synthase activity
DPADHS01_RS21395	COG3622	Belongs to the hyi family
DPADHS01_RS21400	COG2084	Dehydrogenase
DPADHS01_RS21410	COG0469	pyruvate kinase activity
DPADHS01_RS21415	COG4413	Urea transporter
DPADHS01_RS21420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DPADHS01_RS21435	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DPADHS01_RS21445	COG3192	ethanolamine utilization protein
DPADHS01_RS21460	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS21465	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DPADHS01_RS21540	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DPADHS01_RS21555	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS21560	COG1496	oxidoreductase activity
DPADHS01_RS21585	COG0835	chemotaxis
DPADHS01_RS21595	COG1192	Involved in chromosome partitioning
DPADHS01_RS21600	COG1360	Flagellar Motor Protein
DPADHS01_RS21605	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
DPADHS01_RS21615	COG2198	Histidine kinase
DPADHS01_RS21615	COG0784	Response regulator, receiver
DPADHS01_RS21615	COG0643	Histidine kinase
DPADHS01_RS21645	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
DPADHS01_RS21650	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
DPADHS01_RS21685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DPADHS01_RS21690	COG1518	maintenance of DNA repeat elements
DPADHS01_RS21705	COG1857	crispr-associated protein
DPADHS01_RS21725	COG4191	Histidine kinase
DPADHS01_RS21725	COG0784	Response regulator, receiver
DPADHS01_RS21780	COG1289	transmembrane transporter activity
DPADHS01_RS21795	COG2207	Transcriptional regulator
DPADHS01_RS21815	COG2249	NAD(P)H dehydrogenase (quinone) activity
DPADHS01_RS21820	COG2249	NAD(P)H dehydrogenase (quinone) activity
DPADHS01_RS21830	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DPADHS01_RS21855	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DPADHS01_RS21865	COG0318	PFAM AMP-dependent synthetase and ligase
DPADHS01_RS21870	COG0367	asparagine synthase
DPADHS01_RS21880	COG2211	Major facilitator Superfamily
DPADHS01_RS21930	COG1335	isochorismatase
DPADHS01_RS21935	COG0583	DNA-binding transcription factor activity
DPADHS01_RS21945	COG0791	NLP P60 protein
DPADHS01_RS21950	COG0791	NLP P60 protein
DPADHS01_RS21960	COG3829	transcription factor binding
DPADHS01_RS21975	COG2818	Glycosylase
DPADHS01_RS22000	COG1804	L-carnitine dehydratase bile acid-inducible protein F
DPADHS01_RS22005	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS22015	COG0625	glutathione transferase activity
DPADHS01_RS22035	COG5002	protein histidine kinase activity
DPADHS01_RS22035	COG5001	Diguanylate cyclase
DPADHS01_RS22035	COG3447	MASE1 domain protein
DPADHS01_RS22055	COG4459	periplasmic nitrate reductase
DPADHS01_RS22060	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DPADHS01_RS22060	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
DPADHS01_RS22065	COG3062	negative regulation of establishment of protein localization
DPADHS01_RS22075	COG3043	anaerobic respiration
DPADHS01_RS22080	COG3005	denitrification pathway
DPADHS01_RS22085	COG2951	lytic endotransglycosylase activity
DPADHS01_RS22090	COG0861	Integral membrane protein TerC family
DPADHS01_RS22095	COG0753	catalase activity
DPADHS01_RS22115	COG2977	Belongs to the P-Pant transferase superfamily
DPADHS01_RS22120	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DPADHS01_RS22135	COG2226	methyltransferase
DPADHS01_RS22150	COG2205	protein histidine kinase activity
DPADHS01_RS22155	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS22160	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DPADHS01_RS22160	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DPADHS01_RS22165	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DPADHS01_RS22210	COG0531	amino acid
DPADHS01_RS22240	COG0583	DNA-binding transcription factor activity
DPADHS01_RS22245	COG3257	ureidoglycine aminohydrolase activity
DPADHS01_RS22260	COG3321	synthase
DPADHS01_RS22260	COG0604	alcohol dehydrogenase
DPADHS01_RS22260	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS22265	COG2197	response regulator
DPADHS01_RS22305	COG0583	DNA-binding transcription factor activity
DPADHS01_RS22310	COG0667	Aldo Keto reductase
DPADHS01_RS22335	COG0242	peptide deformylase activity
DPADHS01_RS22345	COG2199	diguanylate cyclase activity
DPADHS01_RS22350	COG2885	chlorophyll binding
DPADHS01_RS22380	COG1132	(ABC) transporter
DPADHS01_RS22390	COG4628	conserved protein (DUF2132)
DPADHS01_RS22395	COG2133	pyrroloquinoline quinone binding
DPADHS01_RS22410	COG2207	Transcriptional regulator
DPADHS01_RS22415	COG0477	Major facilitator Superfamily
DPADHS01_RS22430	COG2882	bacterial-type flagellum organization
DPADHS01_RS22485	COG1516	flagellar protein fliS
DPADHS01_RS22490	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
DPADHS01_RS22500	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
DPADHS01_RS22505	COG1216	Glycosyl transferase, family 2
DPADHS01_RS22505	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS22510	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DPADHS01_RS22515	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DPADHS01_RS22525	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DPADHS01_RS22555	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS22580	COG1256	bacterial-type flagellum assembly
DPADHS01_RS22605	COG4787	bacterial-type flagellum-dependent cell motility
DPADHS01_RS22615	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DPADHS01_RS22625	COG1815	bacterial-type flagellum-dependent cell motility
DPADHS01_RS22670	COG0326	Molecular chaperone. Has ATPase activity
DPADHS01_RS22685	COG3189	MarR family transcriptional regulator
DPADHS01_RS22705	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DPADHS01_RS22720	COG2212	antiporter activity
DPADHS01_RS22725	COG1863	multisubunit Na H antiporter MnhE subunit
DPADHS01_RS22730	COG0651	ATP synthesis coupled electron transport
DPADHS01_RS22735	COG1006	Multisubunit Na H antiporter MnhC subunit
DPADHS01_RS22740	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DPADHS01_RS22740	COG2111	Na H antiporter
DPADHS01_RS22745	COG3133	Outer membrane lipoprotein
DPADHS01_RS22755	COG1929	Belongs to the glycerate kinase type-1 family
DPADHS01_RS22760	COG2610	gluconate transmembrane transporter activity
DPADHS01_RS22765	COG3835	regulator
DPADHS01_RS22775	COG2885	chlorophyll binding
DPADHS01_RS22790	COG1199	ATP-dependent helicase activity
DPADHS01_RS22830	COG2860	membrane
DPADHS01_RS22845	COG0653	protein targeting
DPADHS01_RS22850	COG0625	glutathione transferase activity
DPADHS01_RS22875	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS22880	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS22900	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS22905	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS22910	COG1024	Enoyl-CoA hydratase
DPADHS01_RS22915	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS22925	COG2814	Major facilitator Superfamily
DPADHS01_RS22930	COG2030	dehydratase
DPADHS01_RS22940	COG0183	Belongs to the thiolase family
DPADHS01_RS23035	COG3772	lysozyme
DPADHS01_RS23085	COG0305	Participates in initiation and elongation during chromosome replication
DPADHS01_RS23215	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
DPADHS01_RS23220	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DPADHS01_RS23235	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DPADHS01_RS23245	COG0425	Belongs to the sulfur carrier protein TusA family
DPADHS01_RS23270	COG2814	Major facilitator Superfamily
DPADHS01_RS23305	COG0501	Belongs to the peptidase M48B family
DPADHS01_RS23315	COG0583	DNA-binding transcription factor activity
DPADHS01_RS23380	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DPADHS01_RS23485	COG1074	ATP-dependent DNA helicase activity
DPADHS01_RS23540	COG2003	Belongs to the UPF0758 family
DPADHS01_RS23610	COG0582	viral genome integration into host DNA
DPADHS01_RS23645	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DPADHS01_RS23650	COG3188	usher protein
DPADHS01_RS23670	COG1051	belongs to the nudix hydrolase family
DPADHS01_RS23685	COG1192	Involved in chromosome partitioning
DPADHS01_RS23825	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DPADHS01_RS23830	COG1278	Cold shock
DPADHS01_RS23840	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DPADHS01_RS23850	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DPADHS01_RS23855	COG3657	addiction module killer protein
DPADHS01_RS23880	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DPADHS01_RS23975	COG2135	peptidase activity
DPADHS01_RS24045	COG1074	ATP-dependent DNA helicase activity
DPADHS01_RS24055	COG4644	lycopene metabolic process
DPADHS01_RS24075	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS24190	COG3609	addiction module antidote protein, CC2985 family
DPADHS01_RS24220	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DPADHS01_RS24235	COG0602	queuosine metabolic process
DPADHS01_RS24240	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DPADHS01_RS24270	COG0824	Thioesterase
DPADHS01_RS24300	COG0783	Belongs to the Dps family
DPADHS01_RS24345	COG3118	belongs to the thioredoxin family
DPADHS01_RS24380	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DPADHS01_RS24395	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DPADHS01_RS24435	COG3122	Protein conserved in bacteria
DPADHS01_RS24445	COG3956	TIGRFAM MazG family protein
DPADHS01_RS24450	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DPADHS01_RS24480	COG2205	protein histidine kinase activity
DPADHS01_RS24480	COG0784	Response regulator, receiver
DPADHS01_RS24480	COG5002	protein histidine kinase activity
DPADHS01_RS24485	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DPADHS01_RS24535	COG3038	cytochrome b561
DPADHS01_RS24550	COG4807	Protein conserved in bacteria
DPADHS01_RS24560	COG2239	Acts as a magnesium transporter
DPADHS01_RS24630	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DPADHS01_RS24725	COG2301	Belongs to the HpcH HpaI aldolase family
DPADHS01_RS24735	COG2079	MmgE PrpD family protein
DPADHS01_RS24745	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS24750	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
DPADHS01_RS24755	COG0583	DNA-binding transcription factor activity
DPADHS01_RS24760	COG0583	DNA-binding transcription factor activity
DPADHS01_RS24810	COG1113	amino acid transport
DPADHS01_RS24830	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS24830	COG0604	alcohol dehydrogenase
DPADHS01_RS24830	COG3321	synthase
DPADHS01_RS24860	COG0271	Belongs to the BolA IbaG family
DPADHS01_RS24900	COG0492	ferredoxin-NADP+ reductase activity
DPADHS01_RS24905	COG0450	alkyl hydroperoxide reductase
DPADHS01_RS24940	COG1307	EDD domain protein, DegV family
DPADHS01_RS24950	COG1309	transcriptional regulator
DPADHS01_RS24955	COG0386	Belongs to the glutathione peroxidase family
DPADHS01_RS24975	COG0204	Acyl-transferase
DPADHS01_RS24980	COG2885	chlorophyll binding
DPADHS01_RS24985	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DPADHS01_RS25000	COG2267	carboxylic ester hydrolase activity
DPADHS01_RS25050	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
DPADHS01_RS25085	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DPADHS01_RS25100	COG0546	phosphoglycolate phosphatase activity
DPADHS01_RS25115	COG3023	N-Acetylmuramoyl-L-alanine amidase
DPADHS01_RS25130	COG0656	L-ascorbic acid biosynthetic process
DPADHS01_RS25155	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DPADHS01_RS25165	COG1802	Transcriptional regulator
DPADHS01_RS25175	COG0372	Belongs to the citrate synthase family
DPADHS01_RS25190	COG2079	MmgE PrpD family protein
DPADHS01_RS25205	COG1113	amino acid transport
DPADHS01_RS25235	COG0583	DNA-binding transcription factor activity
DPADHS01_RS25240	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DPADHS01_RS25250	COG4206	TonB-dependent receptor
DPADHS01_RS25260	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DPADHS01_RS25325	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DPADHS01_RS25405	COG3180	Ammonia monooxygenase
DPADHS01_RS25415	COG2720	vancomycin resistance protein
DPADHS01_RS25430	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS25435	COG1024	Enoyl-CoA hydratase
DPADHS01_RS25455	COG2910	NAD(P)H-binding
DPADHS01_RS25460	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DPADHS01_RS25530	COG0582	viral genome integration into host DNA
DPADHS01_RS25580	COG0629	single-stranded DNA binding
DPADHS01_RS25585	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DPADHS01_RS25745	COG2003	Belongs to the UPF0758 family
DPADHS01_RS25855	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DPADHS01_RS25890	COG0789	Transcriptional regulator
DPADHS01_RS25900	COG2608	mercury ion transmembrane transporter activity
DPADHS01_RS25905	COG2608	mercury ion transmembrane transporter activity
DPADHS01_RS25910	COG0789	Transcriptional regulator
DPADHS01_RS25920	COG1120	ATPase activity
DPADHS01_RS25935	COG3586	endonuclease activity
DPADHS01_RS25945	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DPADHS01_RS25955	COG0583	DNA-binding transcription factor activity
DPADHS01_RS25965	COG0464	growth
DPADHS01_RS25985	COG4974	Belongs to the 'phage' integrase family
DPADHS01_RS25995	COG4128	Pfam Zonular occludens toxin
DPADHS01_RS26070	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DPADHS01_RS26105	COG0583	DNA-binding transcription factor activity
DPADHS01_RS26120	COG0463	Glycosyl transferase, family 2
DPADHS01_RS26125	COG0154	amidase activity
DPADHS01_RS26145	COG0583	DNA-binding transcription factor activity
DPADHS01_RS26155	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DPADHS01_RS26190	COG2831	hemolysin activation secretion protein
DPADHS01_RS26340	COG0420	3'-5' exonuclease activity
DPADHS01_RS26350	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DPADHS01_RS26355	COG1074	ATP-dependent DNA helicase activity
DPADHS01_RS26360	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DPADHS01_RS26365	COG0095	Lipoate-protein ligase
DPADHS01_RS26370	COG0697	spore germination
DPADHS01_RS26385	COG0840	transmembrane signaling receptor activity
DPADHS01_RS26395	COG0306	phosphate transporter
DPADHS01_RS26455	COG4964	Belongs to the GSP D family
DPADHS01_RS26475	COG0433	COG0433 Predicted ATPase
DPADHS01_RS26510	COG0788	formyltetrahydrofolate deformylase activity
DPADHS01_RS26520	COG2925	Exonuclease
DPADHS01_RS26550	COG0714	Associated with various cellular activities
DPADHS01_RS26580	COG0589	response to stress
DPADHS01_RS26590	COG1024	Enoyl-CoA hydratase
DPADHS01_RS26600	COG3706	GGDEF domain
DPADHS01_RS26620	COG0693	protein deglycase activity
DPADHS01_RS26635	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DPADHS01_RS26650	COG0154	amidase activity
DPADHS01_RS26660	COG1473	amidohydrolase
DPADHS01_RS26675	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DPADHS01_RS26680	COG0426	domain, Protein
DPADHS01_RS26680	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DPADHS01_RS26700	COG0589	response to stress
DPADHS01_RS26715	COG2814	Major facilitator Superfamily
DPADHS01_RS26720	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS26735	COG1918	ferrous iron import across plasma membrane
DPADHS01_RS26750	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DPADHS01_RS26790	COG1704	LemA family
DPADHS01_RS26815	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS26820	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS26835	COG3642	lipopolysaccharide core region biosynthetic process
DPADHS01_RS26845	COG2205	protein histidine kinase activity
DPADHS01_RS26850	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS26885	COG3030	protein affecting phage T7 exclusion by the F plasmid
DPADHS01_RS26895	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS26920	COG0668	transmembrane transport
DPADHS01_RS26930	COG0745	RESPONSE REGULATOR receiver
DPADHS01_RS26945	COG2096	Adenosyltransferase
DPADHS01_RS26950	COG0494	nUDIX hydrolase
DPADHS01_RS26970	COG0739	heme binding
DPADHS01_RS26970	COG1196	nuclear chromosome segregation
DPADHS01_RS26970	COG0741	lytic transglycosylase activity
DPADHS01_RS27015	COG0772	Belongs to the SEDS family
DPADHS01_RS27030	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DPADHS01_RS27070	COG3107	peptidoglycan biosynthetic process
DPADHS01_RS27085	COG2823	Periplasmic or secreted lipoprotein
DPADHS01_RS27090	COG2969	positive regulation of protein catabolic process
DPADHS01_RS27095	COG0625	glutathione transferase activity
DPADHS01_RS27100	COG2857	Cytochrome c1
DPADHS01_RS27105	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
DPADHS01_RS27110	COG0723	plastoquinol--plastocyanin reductase activity
DPADHS01_RS27125	COG0667	Aldo Keto reductase
DPADHS01_RS27130	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS27145	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DPADHS01_RS27155	COG2945	thiolester hydrolase activity
DPADHS01_RS27175	COG2951	lytic endotransglycosylase activity
DPADHS01_RS27185	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DPADHS01_RS27225	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DPADHS01_RS27230	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DPADHS01_RS27235	COG1127	ABC transporter
DPADHS01_RS27245	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DPADHS01_RS27260	COG1137	ATPase activity
DPADHS01_RS27315	COG0312	modulator of DNA gyrase
DPADHS01_RS27325	COG0312	modulator of DNA gyrase
DPADHS01_RS27330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DPADHS01_RS27340	COG1530	ribonuclease E activity
DPADHS01_RS27355	COG1792	Involved in formation and maintenance of cell shape
DPADHS01_RS27360	COG1077	Cell shape determining protein MreB Mrl
DPADHS01_RS27380	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DPADHS01_RS27385	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DPADHS01_RS27390	COG4676	Protein conserved in bacteria
DPADHS01_RS27395	COG5445	Predicted secreted protein (DUF2300)
DPADHS01_RS27410	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
DPADHS01_RS27415	COG4676	Protein conserved in bacteria
DPADHS01_RS27420	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
DPADHS01_RS27435	COG0747	negative chemotaxis
DPADHS01_RS27440	COG0747	negative chemotaxis
DPADHS01_RS27455	COG0747	negative chemotaxis
DPADHS01_RS27465	COG0747	negative chemotaxis
DPADHS01_RS27470	COG0601	transmembrane transport
DPADHS01_RS27475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DPADHS01_RS27480	COG0444	Belongs to the ABC transporter superfamily
DPADHS01_RS27485	COG4608	Belongs to the ABC transporter superfamily
DPADHS01_RS27500	COG1984	allophanate hydrolase subunit 2
DPADHS01_RS27520	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DPADHS01_RS27525	COG4774	siderophore transport
DPADHS01_RS27540	COG2194	sulfuric ester hydrolase activity
DPADHS01_RS27550	COG0019	diaminopimelate decarboxylase activity
DPADHS01_RS27655	COG1252	NADH dehydrogenase
DPADHS01_RS27660	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DPADHS01_RS27665	COG2831	hemolysin activation secretion protein
DPADHS01_RS27735	COG4969	Belongs to the N-Me-Phe pilin family
DPADHS01_RS27775	COG1047	Peptidyl-prolyl cis-trans
DPADHS01_RS27790	COG0196	riboflavin kinase activity
DPADHS01_RS27805	COG3045	CreA protein
DPADHS01_RS27830	COG0142	geranyltranstransferase activity
DPADHS01_RS27845	COG0545	Peptidyl-prolyl cis-trans isomerase
DPADHS01_RS27865	COG1067	ATP-dependent peptidase activity
DPADHS01_RS27890	COG4650	regulator
DPADHS01_RS27905	COG1690	Belongs to the RtcB family
DPADHS01_RS27910	COG3541	Predicted nucleotidyltransferase
DPADHS01_RS27930	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DPADHS01_RS27955	COG1136	(ABC) transporter
DPADHS01_RS27955	COG0577	efflux transmembrane transporter activity
DPADHS01_RS27960	COG1136	(ABC) transporter
DPADHS01_RS27960	COG0577	efflux transmembrane transporter activity
DPADHS01_RS27965	COG0488	(ABC) transporter
DPADHS01_RS27985	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DPADHS01_RS27990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS28015	COG0523	cobalamin synthesis protein
DPADHS01_RS28020	COG2879	small protein
DPADHS01_RS28025	COG1966	Carbon starvation protein
DPADHS01_RS28095	COG3608	succinylglutamate desuccinylase aspartoacylase
DPADHS01_RS28095	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
DPADHS01_RS28100	COG2010	Cytochrome c
DPADHS01_RS28135	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DPADHS01_RS28145	COG0833	amino acid
DPADHS01_RS28150	COG2119	membrane
DPADHS01_RS28165	COG0501	Belongs to the peptidase M48B family
DPADHS01_RS28170	COG0840	transmembrane signaling receptor activity
DPADHS01_RS28175	COG2135	peptidase activity
DPADHS01_RS28180	COG1285	pathogenesis
DPADHS01_RS28240	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
DPADHS01_RS28295	COG1090	epimerase
DPADHS01_RS28300	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
DPADHS01_RS28310	COG0789	Transcriptional regulator
DPADHS01_RS28330	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DPADHS01_RS28385	COG0012	GTP binding
DPADHS01_RS28405	COG0288	reversible hydration of carbon dioxide
DPADHS01_RS28415	COG0456	acetyltransferase
DPADHS01_RS28460	COG1840	ABC-type Fe3 transport system, periplasmic component
DPADHS01_RS28465	COG1178	ABC-type Fe3 transport system permease component
DPADHS01_RS28470	COG3008	intermembrane lipid transfer
DPADHS01_RS28475	COG2995	paraquat-inducible protein a
DPADHS01_RS28480	COG2995	paraquat-inducible protein a
DPADHS01_RS28520	COG1183	phosphatidylcholine synthase activity
DPADHS01_RS28535	COG0028	Belongs to the TPP enzyme family
DPADHS01_RS28545	COG3098	single-species biofilm formation
DPADHS01_RS28555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DPADHS01_RS28590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DPADHS01_RS28595	COG4558	Periplasmic binding protein
DPADHS01_RS28600	COG3720	iron ion transport
DPADHS01_RS28605	COG4771	TonB-dependent receptor
DPADHS01_RS28630	COG0436	Aminotransferase
DPADHS01_RS28640	COG2321	neutral zinc metallopeptidase
DPADHS01_RS28650	COG2252	PERMEase
DPADHS01_RS28665	COG0436	Aminotransferase
DPADHS01_RS28670	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DPADHS01_RS28685	COG4191	Histidine kinase
DPADHS01_RS28785	COG0195	Participates in both transcription termination and antitermination
DPADHS01_RS28820	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DPADHS01_RS28885	COG0497	DNA recombination
DPADHS01_RS28915	COG2186	Transcriptional regulator
DPADHS01_RS28920	COG1620	l-lactate permease
DPADHS01_RS28970	COG0697	spore germination
DPADHS01_RS28990	COG0697	spore germination
DPADHS01_RS28995	COG1522	sequence-specific DNA binding
DPADHS01_RS29005	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS29025	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DPADHS01_RS29055	COG0509	glycine decarboxylation via glycine cleavage system
DPADHS01_RS29095	COG0531	amino acid
DPADHS01_RS29110	COG3276	selenocysteine insertion sequence binding
DPADHS01_RS29125	COG2864	formate dehydrogenase
DPADHS01_RS29130	COG0437	4 iron, 4 sulfur cluster binding
DPADHS01_RS29135	COG3383	formate dehydrogenase (NAD+) activity
DPADHS01_RS29135	COG0243	molybdopterin cofactor binding
DPADHS01_RS29140	COG0243	molybdopterin cofactor binding
DPADHS01_RS29140	COG3383	formate dehydrogenase (NAD+) activity
DPADHS01_RS29145	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
DPADHS01_RS29150	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS29150	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS29175	COG0463	Glycosyl transferase, family 2
DPADHS01_RS29185	COG0534	Mate efflux family protein
DPADHS01_RS29195	COG1283	sodium-dependent phosphate transmembrane transporter activity
DPADHS01_RS29220	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DPADHS01_RS29245	COG4221	oxidoreductase activity
DPADHS01_RS29250	COG1272	protein, Hemolysin III
DPADHS01_RS29285	COG0023	Translation Initiation Factor
DPADHS01_RS29370	COG2095	MarC family integral membrane protein
DPADHS01_RS29375	COG0683	leucine binding
DPADHS01_RS29390	COG0411	ABC transporter
DPADHS01_RS29435	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DPADHS01_RS29450	COG0443	Heat shock 70 kDa protein
DPADHS01_RS29475	COG0789	Transcriptional regulator
DPADHS01_RS29480	COG2982	Protein involved in outer membrane biogenesis
DPADHS01_RS29485	COG2193	ferroxidase activity
DPADHS01_RS29495	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DPADHS01_RS29500	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
DPADHS01_RS29560	COG3712	iron ion homeostasis
DPADHS01_RS29565	COG1595	DNA-templated transcription, initiation
DPADHS01_RS29585	COG2814	Major facilitator Superfamily
DPADHS01_RS29595	COG0583	DNA-binding transcription factor activity
DPADHS01_RS29620	COG4221	oxidoreductase activity
DPADHS01_RS29625	COG2423	ornithine cyclodeaminase activity
DPADHS01_RS29655	COG0583	DNA-binding transcription factor activity
DPADHS01_RS29670	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DPADHS01_RS29710	COG0668	transmembrane transport
DPADHS01_RS29730	COG3300	MHYT domain
DPADHS01_RS29730	COG5001	Diguanylate cyclase
DPADHS01_RS29740	COG0305	Participates in initiation and elongation during chromosome replication
DPADHS01_RS29770	COG0557	exoribonuclease II activity
DPADHS01_RS29800	COG0330	HflC and HflK could
DPADHS01_RS29805	COG0330	HflC and HflK could
DPADHS01_RS29810	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DPADHS01_RS29830	COG0860	N-Acetylmuramoyl-L-alanine amidase
DPADHS01_RS29835	COG0802	atpase or kinase
DPADHS01_RS29840	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DPADHS01_RS29840	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DPADHS01_RS29890	COG5001	Diguanylate cyclase
DPADHS01_RS29890	COG3300	MHYT domain
DPADHS01_RS29895	COG0560	Phosphoserine phosphatase
DPADHS01_RS29895	COG3830	Belongs to the UPF0237 family
DPADHS01_RS29905	COG1988	membrane-bound metal-dependent
DPADHS01_RS29920	COG3577	Aspartyl protease
DPADHS01_RS29935	COG3150	esterase
DPADHS01_RS29940	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DPADHS01_RS29950	COG0494	nUDIX hydrolase
DPADHS01_RS29965	COG1538	Outer membrane efflux protein
DPADHS01_RS29970	COG2249	NAD(P)H dehydrogenase (quinone) activity
DPADHS01_RS29985	COG0045	succinate-CoA ligase (ADP-forming) activity
DPADHS01_RS29990	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS29995	COG1024	Enoyl-CoA hydratase
DPADHS01_RS30000	COG0833	amino acid
DPADHS01_RS30030	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS30030	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS30040	COG1519	Transferase
DPADHS01_RS30045	COG0583	DNA-binding transcription factor activity
DPADHS01_RS30060	COG0667	Aldo Keto reductase
DPADHS01_RS30070	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS30075	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS30080	COG0367	asparagine synthase
DPADHS01_RS30105	COG1215	transferase activity, transferring glycosyl groups
DPADHS01_RS30125	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS30130	COG2192	nodulation
DPADHS01_RS30155	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS30160	COG0859	PFAM glycosyl transferase family 9
DPADHS01_RS30165	COG0859	PFAM glycosyl transferase family 9
DPADHS01_RS30200	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DPADHS01_RS30205	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS30215	COG3264	Mechanosensitive ion channel
DPADHS01_RS30215	COG1196	nuclear chromosome segregation
DPADHS01_RS30225	COG0730	response to heat
DPADHS01_RS30230	COG2873	o-acetylhomoserine
DPADHS01_RS30245	COG1192	Involved in chromosome partitioning
DPADHS01_RS30250	COG0583	DNA-binding transcription factor activity
DPADHS01_RS30255	COG2814	Major facilitator Superfamily
DPADHS01_RS30280	COG0493	'glutamate synthase
DPADHS01_RS30285	COG0070	glutamate synthase
DPADHS01_RS30285	COG0069	glutamate synthase activity
DPADHS01_RS30285	COG0067	glutamate synthase
DPADHS01_RS30335	COG0281	malic enzyme
DPADHS01_RS30355	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DPADHS01_RS30465	COG0840	transmembrane signaling receptor activity
DPADHS01_RS30475	COG1126	abc transporter atp-binding protein
DPADHS01_RS30480	COG0765	amino acid transport
DPADHS01_RS30510	COG1051	belongs to the nudix hydrolase family
DPADHS01_RS30515	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DPADHS01_RS30520	COG0251	oxidation-reduction process
DPADHS01_RS30540	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DPADHS01_RS30560	COG2986	histidine ammonia-lyase
DPADHS01_RS30565	COG4175	Glycine betaine
DPADHS01_RS30570	COG4176	ABC-type proline glycine betaine transport system permease component
DPADHS01_RS30590	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DPADHS01_RS30625	COG0402	S-adenosylhomocysteine deaminase activity
DPADHS01_RS30675	COG0789	Transcriptional regulator
DPADHS01_RS30680	COG1217	gtp-binding protein TYPA
DPADHS01_RS30700	COG0668	transmembrane transport
DPADHS01_RS30715	COG3852	Histidine kinase
DPADHS01_RS30730	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DPADHS01_RS30760	COG4942	peptidase
DPADHS01_RS30765	COG0793	Belongs to the peptidase S41A family
DPADHS01_RS30770	COG2861	carbohydrate metabolic process
DPADHS01_RS30830	COG0579	oxidoreductase
DPADHS01_RS30840	COG1194	a g-specific adenine glycosylase
DPADHS01_RS30850	COG0673	inositol 2-dehydrogenase activity
DPADHS01_RS30885	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS30920	COG1846	Transcriptional regulator
DPADHS01_RS30930	COG1566	PFAM secretion protein HlyD family protein
DPADHS01_RS30935	COG2814	Major facilitator Superfamily
DPADHS01_RS30950	COG4695	Portal protein
DPADHS01_RS31155	COG1088	dTDP-glucose 4,6-dehydratase activity
DPADHS01_RS31160	COG1091	dTDP-4-dehydrorhamnose reductase activity
DPADHS01_RS31225	COG1218	3'(2'),5'-bisphosphate nucleotidase
DPADHS01_RS31230	COG0494	nUDIX hydrolase
DPADHS01_RS31235	COG1011	Hydrolase
DPADHS01_RS31240	COG1652	LysM domain
DPADHS01_RS31250	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
DPADHS01_RS31270	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DPADHS01_RS31280	COG0824	Thioesterase
DPADHS01_RS31285	COG1454	alcohol dehydrogenase
DPADHS01_RS31290	COG1960	acyl-CoA dehydrogenase activity
DPADHS01_RS31295	COG1024	Enoyl-CoA hydratase
DPADHS01_RS31295	COG1250	3-hydroxyacyl-CoA dehydrogenase
DPADHS01_RS31305	COG0778	Nitroreductase
DPADHS01_RS31330	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DPADHS01_RS31335	COG0189	ligase activity
DPADHS01_RS31335	COG4067	protein conserved in archaea
DPADHS01_RS31360	COG2183	response to ionizing radiation
DPADHS01_RS31390	COG0306	phosphate transporter
DPADHS01_RS31395	COG1392	Phosphate transport regulator
DPADHS01_RS31400	COG3025	triphosphatase activity
DPADHS01_RS31405	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DPADHS01_RS31435	COG1178	ABC-type Fe3 transport system permease component
DPADHS01_RS31445	COG0583	DNA-binding transcription factor activity
DPADHS01_RS31460	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DPADHS01_RS31470	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DPADHS01_RS31475	COG0006	proline dipeptidase activity
DPADHS01_RS31500	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DPADHS01_RS31510	COG0842	Transport permease protein
DPADHS01_RS31515	COG0842	Transport permease protein
DPADHS01_RS31515	COG1129	ABC transporter
DPADHS01_RS31520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DPADHS01_RS31535	COG2271	Major facilitator Superfamily
DPADHS01_RS31550	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DPADHS01_RS31550	COG2755	lipolytic protein G-D-S-L family
DPADHS01_RS31580	COG0586	Pfam SNARE associated Golgi protein
DPADHS01_RS31585	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DPADHS01_RS31590	COG2050	protein possibly involved in aromatic compounds catabolism
DPADHS01_RS31600	COG0672	)-iron permease
DPADHS01_RS31605	COG1280	lysine exporter protein (LysE YggA)
DPADHS01_RS31610	COG0861	Integral membrane protein TerC family
DPADHS01_RS31620	COG0488	(ABC) transporter
DPADHS01_RS31675	COG3275	phosphorelay sensor kinase activity
DPADHS01_RS31705	COG0598	Magnesium transport protein CorA
DPADHS01_RS31735	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DPADHS01_RS31795	COG0432	Pfam Uncharacterised protein family UPF0047
DPADHS01_RS31800	COG0004	ammonium transporteR
DPADHS01_RS31805	COG0347	Belongs to the P(II) protein family
DPADHS01_RS31815	COG0606	chelatase, subunit chli
DPADHS01_RS31820	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DPADHS01_RS31830	COG0583	DNA-binding transcription factor activity
DPADHS01_RS31845	COG0210	DNA helicase
DPADHS01_RS31850	COG0028	Belongs to the TPP enzyme family
DPADHS01_RS31860	COG0427	acetyl-CoA hydrolase
DPADHS01_RS31870	COG1917	Cupin 2, conserved barrel domain protein
DPADHS01_RS31870	COG1396	sequence-specific DNA binding
DPADHS01_RS31880	COG0251	oxidation-reduction process
DPADHS01_RS31910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DPADHS01_RS31915	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DPADHS01_RS31920	COG2814	Major facilitator Superfamily
DPADHS01_RS31925	COG1012	belongs to the aldehyde dehydrogenase family
DPADHS01_RS31930	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DPADHS01_RS31950	COG0747	negative chemotaxis
DPADHS01_RS31965	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DPADHS01_RS32005	COG3245	cytochrome
DPADHS01_RS32025	COG0708	Exodeoxyribonuclease III
DPADHS01_RS32040	COG1561	YicC-like family, N-terminal region
DPADHS01_RS32055	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DPADHS01_RS32085	COG0583	DNA-binding transcription factor activity
DPADHS01_RS32090	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DPADHS01_RS32125	COG3193	protein, possibly involved in utilization of glycolate and propanediol
DPADHS01_RS32130	COG0247	lactate metabolic process
DPADHS01_RS32135	COG0277	FAD linked oxidase domain protein
DPADHS01_RS32140	COG0277	FAD linked oxidase domain protein
DPADHS01_RS32145	COG2186	Transcriptional regulator
DPADHS01_RS32175	COG1253	flavin adenine dinucleotide binding
DPADHS01_RS32180	COG0739	heme binding
DPADHS01_RS32200	COG0573	inorganic phosphate transmembrane transporter activity
DPADHS01_RS32240	COG0477	Major facilitator Superfamily
DPADHS01_RS32245	COG1607	acyl-coa hydrolase
DPADHS01_RS32265	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DPADHS01_RS32270	COG4175	Glycine betaine
DPADHS01_RS32275	COG4176	ABC-type proline glycine betaine transport system permease component
DPADHS01_RS32285	COG1760	l-serine dehydratase
DPADHS01_RS32300	COG0583	DNA-binding transcription factor activity
DPADHS01_RS32310	COG0657	acetylesterase activity
DPADHS01_RS32325	COG3246	L-lysine catabolic process to acetate
DPADHS01_RS32380	COG0446	pyridine nucleotide-disulphide oxidoreductase
DPADHS01_RS32380	COG1902	pentaerythritol trinitrate reductase activity
DPADHS01_RS32385	COG0247	lactate metabolic process
DPADHS01_RS32385	COG2181	nitrate reductase activity
DPADHS01_RS32405	COG3655	Transcriptional regulator
DPADHS01_RS32445	COG1017	nitric oxide dioxygenase activity
DPADHS01_RS32445	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DPADHS01_RS32530	COG0583	DNA-binding transcription factor activity
DPADHS01_RS32540	COG2391	methyltransferase activity
DPADHS01_RS32565	COG0511	ligase activity, forming carbon-carbon bonds
DPADHS01_RS32565	COG5016	pyruvate
DPADHS01_RS32570	COG0439	Biotin carboxylase
DPADHS01_RS32575	COG0583	DNA-binding transcription factor activity
DPADHS01_RS32590	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DPADHS01_RS32595	COG0826	peptidase U32
DPADHS01_RS32615	COG0210	DNA helicase
DPADHS01_RS32625	COG0427	acetyl-CoA hydrolase
DPADHS01_RS32640	COG0438	transferase activity, transferring glycosyl groups
DPADHS01_RS32685	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DPADHS01_RS32690	COG2755	lipolytic protein G-D-S-L family
DPADHS01_RS32690	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DPADHS01_RS32730	COG0679	Auxin Efflux Carrier
DPADHS01_RS32740	COG2851	Citrate transporter
DPADHS01_RS32745	COG0861	Integral membrane protein TerC family
DPADHS01_RS32750	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DPADHS01_RS32755	COG1690	Belongs to the RtcB family
DPADHS01_RS32770	COG0612	Peptidase, M16
DPADHS01_RS32790	COG0700	Nucleoside recognition
DPADHS01_RS32795	COG1301	dicarboxylic acid transport
DPADHS01_RS32825	COG3023	N-Acetylmuramoyl-L-alanine amidase
DPADHS01_RS32830	COG2095	MarC family integral membrane protein
DPADHS01_RS32855	COG3245	cytochrome
DPADHS01_RS32890	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DPADHS01_RS32895	COG0735	belongs to the Fur family
DPADHS01_RS32905	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DPADHS01_RS32920	COG2011	ABC-type metal ion transport system permease component
DPADHS01_RS32950	COG0531	amino acid
DPADHS01_RS32960	COG4191	Histidine kinase
DPADHS01_RS32995	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DPADHS01_RS32995	COG4651	solute:proton antiporter activity
DPADHS01_RS33000	COG1607	acyl-coa hydrolase
DPADHS01_RS33010	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS33015	COG0174	glutamine synthetase
DPADHS01_RS33020	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
DPADHS01_RS33025	COG1028	Short-chain dehydrogenase reductase Sdr
DPADHS01_RS33050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DPADHS01_RS33050	COG4651	solute:proton antiporter activity
DPADHS01_RS33055	COG0477	Major facilitator Superfamily
DPADHS01_RS33065	COG0523	cobalamin synthesis protein
DPADHS01_RS33110	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DPADHS01_RS33130	COG2358	TRAP transporter, solute receptor (TAXI family
DPADHS01_RS33135	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DPADHS01_RS33155	COG1349	DNA-binding transcription factor activity
DPADHS01_RS33215	COG1475	DNA binding
DPADHS01_RS33220	COG1192	Involved in chromosome partitioning