PLES_RS00025	SM00382	ATPases associated with a variety of cellular activities
PLES_RS00025	SM00760	Bacterial dnaA protein helix-turn-helix domain
PLES_RS00030	SM00480	DNA polymerase III beta subunit
PLES_RS00040	SM00387	Histidine kinase-like ATPases
PLES_RS00040	SM00433	TopoisomeraseII
PLES_RS00045	SM00563	Phosphate acyltransferases
PLES_RS00060	SM00836	DALR anticodon binding domain
PLES_RS00095	SM00028	Tetratricopeptide repeats
PLES_RS00120	SM00257	Lysin motif
PLES_RS00135	SM00829	Enoylreductase
PLES_RS00195	SM00421	helix_turn_helix, Lux Regulon
PLES_RS00195	SM00448	cheY-homologous receiver domain
PLES_RS00230	SM00912	haemagglutination activity domain
PLES_RS00235	SM01321	PLES_RS00235
PLES_RS00270	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS00315	SM00849	Metallo-beta-lactamase superfamily
PLES_RS00375	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS00395	SM00382	ATPases associated with a variety of cellular activities
PLES_RS00400	SM00220	Serine/Threonine protein kinases, catalytic domain
PLES_RS00400	SM00327	von Willebrand factor (vWF) type A domain
PLES_RS00405	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS00405	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PLES_RS00435	SM00240	Forkhead associated domain
PLES_RS00480	SM00382	ATPases associated with a variety of cellular activities
PLES_RS00480	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS00540	SM00947	Carbonic anhydrase
PLES_RS00630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS00630	SM00895	PLES_RS00630
PLES_RS00635	SM00895	PLES_RS00635
PLES_RS00665	SM00769	Water Stress and Hypersensitive response
PLES_RS00710	SM00382	ATPases associated with a variety of cellular activities
PLES_RS00785	SM00965	Secretin and TonB N terminus short domain
PLES_RS00805	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS00845	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS00875	SM00267	diguanylate cyclase
PLES_RS00890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS00890	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS00895	SM00448	cheY-homologous receiver domain
PLES_RS00905	SM00138	Methyltransferase, chemotaxis proteins 
PLES_RS00910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS00915	SM00260	Two component signalling adaptor domain
PLES_RS00920	SM00073	Histidine Phosphotransfer domain
PLES_RS00920	SM00260	Two component signalling adaptor domain
PLES_RS00920	SM00387	Histidine kinase-like ATPases
PLES_RS00920	SM01231	PLES_RS00920
PLES_RS00925	SM00448	cheY-homologous receiver domain
PLES_RS00930	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS00940	SM00822	PLES_RS00940
PLES_RS00950	SM00382	ATPases associated with a variety of cellular activities
PLES_RS00980	SM00014	Acid phosphatase homologues
PLES_RS01005	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PLES_RS01005	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PLES_RS01075	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PLES_RS01125	SM01130	PLES_RS01125
PLES_RS01130	SM01007	Class II Aldolase and Adducin N-terminal domain
PLES_RS01135	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS01140	SM00882	Coenzyme A transferase
PLES_RS01145	SM00882	Coenzyme A transferase
PLES_RS01160	SM00998	Adenylosuccinate lyase C-terminus
PLES_RS01190	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS01250	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS01260	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS01275	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS01350	SM00448	cheY-homologous receiver domain
PLES_RS01355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS01390	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS01390	SM00419	helix_turn_helix, cAMP Regulatory protein
PLES_RS01410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS01415	SM00382	ATPases associated with a variety of cellular activities
PLES_RS01440	SM00052	Putative diguanylate phosphodiesterase
PLES_RS01440	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS01440	SM00091	PAS domain
PLES_RS01440	SM00267	diguanylate cyclase
PLES_RS01465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS01465	SM00091	PAS domain
PLES_RS01465	SM00267	diguanylate cyclase
PLES_RS01495	SM01230	PLES_RS01495
PLES_RS01505	SM01230	PLES_RS01505
PLES_RS01525	SM00382	ATPases associated with a variety of cellular activities
PLES_RS01545	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS01570	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
PLES_RS01590	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS01650	SM00382	ATPases associated with a variety of cellular activities
PLES_RS01660	SM00869	Autotransporter beta-domain
PLES_RS01715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS01720	SM00091	PAS domain
PLES_RS01720	SM00267	diguanylate cyclase
PLES_RS01815	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PLES_RS01815	SM01232	PLES_RS01815
PLES_RS01820	SM00563	Phosphate acyltransferases
PLES_RS01830	SM00671	Sel1-like repeats.
PLES_RS01845	SM00764	Citrate lyase ligase C-terminal domain
PLES_RS01900	SM00382	ATPases associated with a variety of cellular activities
PLES_RS01900	SM00962	SRP54-type protein, GTPase domain
PLES_RS01900	SM00963	SRP54-type protein, helical bundle domain
PLES_RS01905	SM00382	ATPases associated with a variety of cellular activities
PLES_RS01965	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS01995	SM01152	PLES_RS01995
PLES_RS02015	SM00382	ATPases associated with a variety of cellular activities
PLES_RS02035	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS02060	SM00732	Likely ribonuclease with RNase H fold.
PLES_RS02080	SM00448	cheY-homologous receiver domain
PLES_RS02085	SM00448	cheY-homologous receiver domain
PLES_RS02090	SM00260	Two component signalling adaptor domain
PLES_RS02095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS02100	SM00138	Methyltransferase, chemotaxis proteins 
PLES_RS02105	SM00073	Histidine Phosphotransfer domain
PLES_RS02105	SM00260	Two component signalling adaptor domain
PLES_RS02105	SM00387	Histidine kinase-like ATPases
PLES_RS02105	SM00448	cheY-homologous receiver domain
PLES_RS02105	SM01231	PLES_RS02105
PLES_RS02115	SM00260	Two component signalling adaptor domain
PLES_RS02120	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS02155	SM00867	YceI-like domain 
PLES_RS02160	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS02180	SM00487	DEAD-like helicases superfamily
PLES_RS02180	SM00490	helicase superfamily c-terminal domain
PLES_RS02200	SM00996	S-adenosyl-L-homocysteine hydrolase
PLES_RS02200	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PLES_RS02295	SM00244	prohibitin homologues
PLES_RS02300	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS02310	SM00487	DEAD-like helicases superfamily
PLES_RS02310	SM00490	helicase superfamily c-terminal domain
PLES_RS02315	SM00357	Cold shock protein domain
PLES_RS02335	SM00382	ATPases associated with a variety of cellular activities
PLES_RS02335	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS02345	SM00563	Phosphate acyltransferases
PLES_RS02355	SM00448	cheY-homologous receiver domain
PLES_RS02355	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS02360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS02360	SM00387	Histidine kinase-like ATPases
PLES_RS02360	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS02395	SM00965	Secretin and TonB N terminus short domain
PLES_RS02515	SM00878	Biotin carboxylase C-terminal domain
PLES_RS02520	SM00796	Allophanate hydrolase subunit 1
PLES_RS02525	SM00797	Allophanate hydrolase subunit 2
PLES_RS02545	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS02545	SM00876	Biotin and Thiamin Synthesis associated domain
PLES_RS02600	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS02620	SM00344	helix_turn_helix ASNC type
PLES_RS02670	SM00327	von Willebrand factor (vWF) type A domain
PLES_RS02680	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS02680	SM00419	helix_turn_helix, cAMP Regulatory protein
PLES_RS02715	SM00091	PAS domain
PLES_RS02715	SM00421	helix_turn_helix, Lux Regulon
PLES_RS02725	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS02785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS02790	SM00861	Transketolase, pyrimidine binding domain
PLES_RS02805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PLES_RS02865	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS02905	SM01276	PLES_RS02905
PLES_RS02930	SM00052	Putative diguanylate phosphodiesterase
PLES_RS02930	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS02930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS02930	SM00091	PAS domain
PLES_RS02930	SM00267	diguanylate cyclase
PLES_RS02940	SM00400	zinc finger
PLES_RS02940	SM00493	PLES_RS02940
PLES_RS02940	SM00766	DNA primase DnaG DnaB-binding
PLES_RS02960	SM01207	PLES_RS02960
PLES_RS02965	SM00905	Dihydroneopterin aldolase
PLES_RS02995	SM00763	PrkA AAA domain
PLES_RS03000	SM00450	Rhodanese Homology Domain
PLES_RS03015	SM00650	Ribosomal RNA adenine dimethylases
PLES_RS03045	SM00271	DnaJ molecular chaperone homology domain
PLES_RS03055	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS03055	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS03055	SM00091	PAS domain
PLES_RS03055	SM00387	Histidine kinase-like ATPases
PLES_RS03060	SM00421	helix_turn_helix, Lux Regulon
PLES_RS03060	SM00448	cheY-homologous receiver domain
PLES_RS03070	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03110	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS03230	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS03230	SM00419	helix_turn_helix, cAMP Regulatory protein
PLES_RS03255	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03260	SM00822	PLES_RS03260
PLES_RS03280	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PLES_RS03385	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PLES_RS03385	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PLES_RS03390	SM00649	Ribosomal protein L11/L12
PLES_RS03415	SM00663	RNA polymerase I subunit A N-terminus
PLES_RS03430	SM00838	Elongation factor G C-terminus
PLES_RS03430	SM00889	Elongation factor G, domain IV
PLES_RS03440	SM01403	PLES_RS03440
PLES_RS03460	SM01382	PLES_RS03460
PLES_RS03460	SM01383	PLES_RS03460
PLES_RS03475	SM00322	K homology RNA-binding domain
PLES_RS03495	SM01374	PLES_RS03495
PLES_RS03500	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PLES_RS03565	SM00363	S4 RNA-binding domain
PLES_RS03565	SM01390	PLES_RS03565
PLES_RS03570	SM00662	RNA polymerases D
PLES_RS03580	SM01060	PLES_RS03580
PLES_RS03610	SM00830	Chorismate mutase type II
PLES_RS03615	SM00824	Thioesterase
PLES_RS03625	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS03630	SM00823	Phosphopantetheine attachment site
PLES_RS03645	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03650	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03765	SM00849	Metallo-beta-lactamase superfamily
PLES_RS03780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS03780	SM00091	PAS domain
PLES_RS03780	SM00387	Histidine kinase-like ATPases
PLES_RS03780	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS03785	SM00421	helix_turn_helix, Lux Regulon
PLES_RS03785	SM00448	cheY-homologous receiver domain
PLES_RS03790	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS03805	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03825	SM01130	PLES_RS03825
PLES_RS03840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS03840	SM00895	PLES_RS03840
PLES_RS03845	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS03860	SM00873	B3/4 domain
PLES_RS03925	SM00965	Secretin and TonB N terminus short domain
PLES_RS03940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS03955	SM00822	PLES_RS03955
PLES_RS03975	SM00382	ATPases associated with a variety of cellular activities
PLES_RS03980	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS03995	SM00287	Bacterial SH3 domain homologues
PLES_RS04000	SM00829	Enoylreductase
PLES_RS04010	SM00861	Transketolase, pyrimidine binding domain
PLES_RS04025	SM00822	PLES_RS04025
PLES_RS04030	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04050	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04120	SM00421	helix_turn_helix, Lux Regulon
PLES_RS04125	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS04190	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04195	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04220	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS04400	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS04415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS04475	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS04490	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS04490	SM00387	Histidine kinase-like ATPases
PLES_RS04490	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS04515	SM00073	Histidine Phosphotransfer domain
PLES_RS04515	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS04515	SM00091	PAS domain
PLES_RS04515	SM00387	Histidine kinase-like ATPases
PLES_RS04515	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS04515	SM00448	cheY-homologous receiver domain
PLES_RS04515	SM01079	PLES_RS04515
PLES_RS04540	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS04570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS04570	SM00387	Histidine kinase-like ATPases
PLES_RS04570	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS04575	SM00448	cheY-homologous receiver domain
PLES_RS04575	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS04600	SM00829	Enoylreductase
PLES_RS04615	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS04635	SM00421	helix_turn_helix, Lux Regulon
PLES_RS04640	SM00903	Flavin reductase like domain
PLES_RS04655	SM00822	PLES_RS04655
PLES_RS04690	SM00912	haemagglutination activity domain
PLES_RS04700	SM00421	helix_turn_helix, Lux Regulon
PLES_RS04700	SM00448	cheY-homologous receiver domain
PLES_RS04710	SM00823	Phosphopantetheine attachment site
PLES_RS04715	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS04730	SM00421	helix_turn_helix, Lux Regulon
PLES_RS04750	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS04785	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04880	SM00861	Transketolase, pyrimidine binding domain
PLES_RS04895	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PLES_RS04915	SM00382	ATPases associated with a variety of cellular activities
PLES_RS04920	SM00091	PAS domain
PLES_RS04920	SM00387	Histidine kinase-like ATPases
PLES_RS04920	SM01080	PLES_RS04920
PLES_RS04940	SM00448	cheY-homologous receiver domain
PLES_RS04940	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS04995	SM00382	ATPases associated with a variety of cellular activities
PLES_RS05020	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
PLES_RS05040	SM00464	Found in ATP-dependent protease La (LON)
PLES_RS05045	SM00014	Acid phosphatase homologues
PLES_RS05105	SM00936	Penicillin-binding protein 5, C-terminal domain 
PLES_RS05120	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS05180	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS05180	SM01091	Transporter associated domain
PLES_RS05195	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS05205	SM00671	Sel1-like repeats.
PLES_RS05225	SM00387	Histidine kinase-like ATPases
PLES_RS05225	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS05225	SM00448	cheY-homologous receiver domain
PLES_RS05275	SM00344	helix_turn_helix ASNC type
PLES_RS05295	SM00487	DEAD-like helicases superfamily
PLES_RS05295	SM00490	helicase superfamily c-terminal domain
PLES_RS05295	SM00847	Helicase associated domain (HA2)  Add an annotation
PLES_RS05315	SM00822	PLES_RS05315
PLES_RS05350	SM00487	DEAD-like helicases superfamily
PLES_RS05350	SM00490	helicase superfamily c-terminal domain
PLES_RS05360	SM00421	helix_turn_helix, Lux Regulon
PLES_RS05360	SM00448	cheY-homologous receiver domain
PLES_RS05365	SM00052	Putative diguanylate phosphodiesterase
PLES_RS05365	SM00448	cheY-homologous receiver domain
PLES_RS05370	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS05370	SM00091	PAS domain
PLES_RS05370	SM00387	Histidine kinase-like ATPases
PLES_RS05370	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS05370	SM00448	cheY-homologous receiver domain
PLES_RS05400	SM00411	bacterial (prokaryotic) histone like domain
PLES_RS05410	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS05415	SM00382	ATPases associated with a variety of cellular activities
PLES_RS05440	SM00382	ATPases associated with a variety of cellular activities
PLES_RS05465	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS05495	SM00421	helix_turn_helix, Lux Regulon
PLES_RS05505	SM00670	Large family of predicted nucleotide-binding domains
PLES_RS05525	SM00852	Probable molybdopterin binding domain
PLES_RS05530	SM00852	Probable molybdopterin binding domain
PLES_RS05595	SM00965	Secretin and TonB N terminus short domain
PLES_RS05610	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS05650	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS05650	SM00382	ATPases associated with a variety of cellular activities
PLES_RS05715	SM00421	helix_turn_helix, Lux Regulon
PLES_RS05715	SM00448	cheY-homologous receiver domain
PLES_RS05720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS05720	SM00387	Histidine kinase-like ATPases
PLES_RS05735	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS05760	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS05765	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS05785	SM00487	DEAD-like helicases superfamily
PLES_RS05785	SM00490	helicase superfamily c-terminal domain
PLES_RS05800	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS05895	SM00382	ATPases associated with a variety of cellular activities
PLES_RS05935	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS05960	SM00052	Putative diguanylate phosphodiesterase
PLES_RS05980	SM01323	PLES_RS05980
PLES_RS06035	SM00271	DnaJ molecular chaperone homology domain
PLES_RS06055	SM00562	PLES_RS06055
PLES_RS06065	SM00028	Tetratricopeptide repeats
PLES_RS06070	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS06090	SM00564	beta-propeller repeat
PLES_RS06130	SM00917	LeuA allosteric (dimerisation) domain
PLES_RS06180	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS06245	SM00421	helix_turn_helix, Lux Regulon
PLES_RS06250	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS06250	SM01240	PLES_RS06250
PLES_RS06275	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS06280	SM00829	Enoylreductase
PLES_RS06305	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS06310	SM01211	PLES_RS06310
PLES_RS06340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS06340	SM00866	PLES_RS06340
PLES_RS06385	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS06385	SM01091	Transporter associated domain
PLES_RS06395	SM00382	ATPases associated with a variety of cellular activities
PLES_RS06395	SM00962	SRP54-type protein, GTPase domain
PLES_RS06395	SM00963	SRP54-type protein, helical bundle domain
PLES_RS06500	SM01322	PLES_RS06500
PLES_RS06560	SM00421	helix_turn_helix, Lux Regulon
PLES_RS06560	SM00448	cheY-homologous receiver domain
PLES_RS06590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS06590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS06595	SM00260	Two component signalling adaptor domain
PLES_RS06600	SM00138	Methyltransferase, chemotaxis proteins 
PLES_RS06605	SM00260	Two component signalling adaptor domain
PLES_RS06620	SM00267	diguanylate cyclase
PLES_RS06620	SM00448	cheY-homologous receiver domain
PLES_RS06625	SM00937	PLES_RS06625
PLES_RS06645	SM01154	PLES_RS06645
PLES_RS06665	SM00506	Appr-1"-p processing enzyme
PLES_RS06685	SM00422	helix_turn_helix, mercury resistance
PLES_RS06765	SM00563	Phosphate acyltransferases
PLES_RS06770	SM00382	ATPases associated with a variety of cellular activities
PLES_RS06880	SM00421	helix_turn_helix, Lux Regulon
PLES_RS07150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS07195	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PLES_RS07205	SM00935	Outer membrane protein (OmpH-like)
PLES_RS07240	SM00481	DNA polymerase alpha chain like domain
PLES_RS07250	SM00977	TilS substrate C-terminal domain
PLES_RS07265	SM01192	PLES_RS07265
PLES_RS07265	SM01193	PLES_RS07265
PLES_RS07295	SM00829	Enoylreductase
PLES_RS07325	SM00257	Lysin motif
PLES_RS07340	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PLES_RS07340	SM00534	ATPase domain of DNA mismatch repair MUTS family
PLES_RS07355	SM00382	ATPases associated with a variety of cellular activities
PLES_RS07370	SM00849	Metallo-beta-lactamase superfamily
PLES_RS07370	SM01027	Beta-Casp domain
PLES_RS07405	SM00382	ATPases associated with a variety of cellular activities
PLES_RS07410	SM01144	PLES_RS07410
PLES_RS07420	SM00421	helix_turn_helix, Lux Regulon
PLES_RS07420	SM00448	cheY-homologous receiver domain
PLES_RS07445	SM00421	helix_turn_helix, Lux Regulon
PLES_RS07460	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS07525	SM00420	helix_turn_helix, Deoxyribose operon repressor
PLES_RS07525	SM01134	PLES_RS07525
PLES_RS07595	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS07615	SM00829	Enoylreductase
PLES_RS07640	SM00354	helix_turn _helix lactose operon repressor
PLES_RS07660	SM00984	UDP binding domain
PLES_RS07730	SM00710	Parallel beta-helix repeats
PLES_RS07730	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
PLES_RS07740	SM00671	Sel1-like repeats.
PLES_RS07755	SM00984	UDP binding domain
PLES_RS07765	SM00382	ATPases associated with a variety of cellular activities
PLES_RS07780	SM00869	Autotransporter beta-domain
PLES_RS07785	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS07815	SM00479	PLES_RS07815
PLES_RS07860	SM01236	PLES_RS07860
PLES_RS07865	SM01236	PLES_RS07865
PLES_RS07870	SM00998	Adenylosuccinate lyase C-terminus
PLES_RS07875	SM00998	Adenylosuccinate lyase C-terminus
PLES_RS07890	SM00478	endonuclease III
PLES_RS07890	SM00525	PLES_RS07890
PLES_RS07900	SM00900	PLES_RS07900
PLES_RS07965	SM00421	helix_turn_helix, Lux Regulon
PLES_RS07975	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS07995	SM00919	Malic enzyme, NAD binding domain
PLES_RS07995	SM01274	PLES_RS07995
PLES_RS08020	SM00487	DEAD-like helicases superfamily
PLES_RS08020	SM00490	helicase superfamily c-terminal domain
PLES_RS08035	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS08295	SM00387	Histidine kinase-like ATPases
PLES_RS08295	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS08295	SM00448	cheY-homologous receiver domain
PLES_RS08315	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS08360	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS08380	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS08395	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08415	SM00905	Dihydroneopterin aldolase
PLES_RS08455	SM01007	Class II Aldolase and Adducin N-terminal domain
PLES_RS08470	SM00822	PLES_RS08470
PLES_RS08490	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS08505	SM00421	helix_turn_helix, Lux Regulon
PLES_RS08515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PLES_RS08525	SM00861	Transketolase, pyrimidine binding domain
PLES_RS08570	SM00965	Secretin and TonB N terminus short domain
PLES_RS08580	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08645	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08650	SM00710	Parallel beta-helix repeats
PLES_RS08650	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
PLES_RS08660	SM00900	PLES_RS08660
PLES_RS08695	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS08710	SM00866	PLES_RS08710
PLES_RS08735	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08740	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08750	SM00072	Guanylate kinase homologues.
PLES_RS08820	SM00382	ATPases associated with a variety of cellular activities
PLES_RS08820	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS08830	SM01012	PLES_RS08830
PLES_RS08865	SM01230	PLES_RS08865
PLES_RS08895	SM00858	PLES_RS08895
PLES_RS08900	SM00260	Two component signalling adaptor domain
PLES_RS08900	SM00448	cheY-homologous receiver domain
PLES_RS08905	SM00138	Methyltransferase, chemotaxis proteins 
PLES_RS08915	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS08915	SM00448	cheY-homologous receiver domain
PLES_RS08925	SM00341	Helicase and RNase D C-terminal
PLES_RS08925	SM00487	DEAD-like helicases superfamily
PLES_RS08925	SM00490	helicase superfamily c-terminal domain
PLES_RS08925	SM00956	PLES_RS08925
PLES_RS08930	SM00267	diguanylate cyclase
PLES_RS08940	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS09010	SM00823	Phosphopantetheine attachment site
PLES_RS09035	SM00422	helix_turn_helix, mercury resistance
PLES_RS09075	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09080	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS09090	SM00052	Putative diguanylate phosphodiesterase
PLES_RS09090	SM00267	diguanylate cyclase
PLES_RS09105	SM00487	DEAD-like helicases superfamily
PLES_RS09105	SM00490	helicase superfamily c-terminal domain
PLES_RS09170	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09170	SM00487	DEAD-like helicases superfamily
PLES_RS09170	SM00490	helicase superfamily c-terminal domain
PLES_RS09170	SM00847	Helicase associated domain (HA2)  Add an annotation
PLES_RS09175	SM00098	Alkaline phosphatase homologues
PLES_RS09220	SM00248	ankyrin repeats
PLES_RS09275	SM00822	PLES_RS09275
PLES_RS09300	SM00487	DEAD-like helicases superfamily
PLES_RS09300	SM00490	helicase superfamily c-terminal domain
PLES_RS09305	SM00387	Histidine kinase-like ATPases
PLES_RS09305	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS09305	SM00448	cheY-homologous receiver domain
PLES_RS09315	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS09325	SM00563	Phosphate acyltransferases
PLES_RS09330	SM00357	Cold shock protein domain
PLES_RS09375	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS09385	SM00671	Sel1-like repeats.
PLES_RS09390	SM00052	Putative diguanylate phosphodiesterase
PLES_RS09390	SM00267	diguanylate cyclase
PLES_RS09395	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PLES_RS09395	SM00245	tail specific protease
PLES_RS09400	SM00829	Enoylreductase
PLES_RS09410	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS09435	SM00866	PLES_RS09435
PLES_RS09515	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS09520	SM00479	PLES_RS09520
PLES_RS09540	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09580	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS09595	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
PLES_RS09605	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS09620	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS09650	SM00387	Histidine kinase-like ATPases
PLES_RS09650	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS09660	SM00448	cheY-homologous receiver domain
PLES_RS09660	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS09680	SM00481	DNA polymerase alpha chain like domain
PLES_RS09710	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PLES_RS09725	SM00448	cheY-homologous receiver domain
PLES_RS09725	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS09730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS09730	SM00387	Histidine kinase-like ATPases
PLES_RS09730	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS09750	SM00382	ATPases associated with a variety of cellular activities
PLES_RS09790	SM00363	S4 RNA-binding domain
PLES_RS09800	SM00267	diguanylate cyclase
PLES_RS09815	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS09845	SM00434	DNA Topoisomerase IV
PLES_RS09855	SM00830	Chorismate mutase type II
PLES_RS09875	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS09880	SM00411	bacterial (prokaryotic) histone like domain
PLES_RS09945	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PLES_RS09960	SM00487	DEAD-like helicases superfamily
PLES_RS09960	SM00490	helicase superfamily c-terminal domain
PLES_RS10080	SM01329	PLES_RS10080
PLES_RS10085	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PLES_RS10090	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PLES_RS10095	SM00257	Lysin motif
PLES_RS10215	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS10295	SM00387	Histidine kinase-like ATPases
PLES_RS10295	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS10300	SM00448	cheY-homologous receiver domain
PLES_RS10300	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS10315	SM00028	Tetratricopeptide repeats
PLES_RS10320	SM00327	von Willebrand factor (vWF) type A domain
PLES_RS10350	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS10405	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS10445	SM00981	PLES_RS10445
PLES_RS10460	SM00421	helix_turn_helix, Lux Regulon
PLES_RS10460	SM00448	cheY-homologous receiver domain
PLES_RS10465	SM00073	Histidine Phosphotransfer domain
PLES_RS10465	SM00387	Histidine kinase-like ATPases
PLES_RS10465	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS10465	SM00448	cheY-homologous receiver domain
PLES_RS10470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS10500	SM00849	Metallo-beta-lactamase superfamily
PLES_RS10545	SM00852	Probable molybdopterin binding domain
PLES_RS10550	SM00852	Probable molybdopterin binding domain
PLES_RS10555	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS10575	SM00046	Diacylglycerol kinase catalytic domain (presumed)
PLES_RS10595	SM00382	ATPases associated with a variety of cellular activities
PLES_RS10635	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PLES_RS10635	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PLES_RS10635	SM00493	PLES_RS10635
PLES_RS10680	SM00487	DEAD-like helicases superfamily
PLES_RS10680	SM00490	helicase superfamily c-terminal domain
PLES_RS10680	SM00982	PLES_RS10680
PLES_RS10680	SM01058	CarD-like/TRCF domain
PLES_RS10685	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PLES_RS10705	SM00900	PLES_RS10705
PLES_RS10760	SM00382	ATPases associated with a variety of cellular activities
PLES_RS10775	SM00849	Metallo-beta-lactamase superfamily
PLES_RS10805	SM00226	Low molecular weight phosphatase family
PLES_RS10815	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS10820	SM00363	S4 RNA-binding domain
PLES_RS10855	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PLES_RS10860	SM00822	PLES_RS10860
PLES_RS10865	SM00823	Phosphopantetheine attachment site
PLES_RS10870	SM00825	Beta-ketoacyl synthase
PLES_RS10915	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS10935	SM00893	Electron transfer flavoprotein domain
PLES_RS10940	SM00893	Electron transfer flavoprotein domain
PLES_RS10975	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PLES_RS10990	SM00382	ATPases associated with a variety of cellular activities
PLES_RS11075	SM00382	ATPases associated with a variety of cellular activities
PLES_RS11090	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS11105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS11105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS11115	SM00822	PLES_RS11115
PLES_RS11120	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS11130	SM00849	Metallo-beta-lactamase superfamily
PLES_RS11145	SM00382	ATPases associated with a variety of cellular activities
PLES_RS11195	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS11210	SM00421	helix_turn_helix, Lux Regulon
PLES_RS11210	SM00448	cheY-homologous receiver domain
PLES_RS11220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS11250	SM00878	Biotin carboxylase C-terminal domain
PLES_RS11270	SM00822	PLES_RS11270
PLES_RS11295	SM00387	Histidine kinase-like ATPases
PLES_RS11300	SM00448	cheY-homologous receiver domain
PLES_RS11325	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PLES_RS11340	SM00460	Transglutaminase/protease-like homologues
PLES_RS11345	SM00880	PLES_RS11345
PLES_RS11355	SM00267	diguanylate cyclase
PLES_RS11370	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS11370	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS11420	SM00382	ATPases associated with a variety of cellular activities
PLES_RS11455	SM00841	Elongation factor P, C-terminal
PLES_RS11455	SM01185	PLES_RS11455
PLES_RS11465	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS11510	SM00487	DEAD-like helicases superfamily
PLES_RS11510	SM00490	helicase superfamily c-terminal domain
PLES_RS11585	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS11590	SM00387	Histidine kinase-like ATPases
PLES_RS11590	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS11590	SM00448	cheY-homologous receiver domain
PLES_RS11675	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS11705	SM00382	ATPases associated with a variety of cellular activities
PLES_RS11715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS11715	SM00387	Histidine kinase-like ATPases
PLES_RS11715	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS11720	SM00448	cheY-homologous receiver domain
PLES_RS11720	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS11755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS11755	SM00866	PLES_RS11755
PLES_RS11775	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS11775	SM00448	cheY-homologous receiver domain
PLES_RS11805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS11805	SM00895	PLES_RS11805
PLES_RS11825	SM00710	Parallel beta-helix repeats
PLES_RS11840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS11880	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS11940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS11940	SM00267	diguanylate cyclase
PLES_RS12085	SM00318	Staphylococcal nuclease homologues
PLES_RS12130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PLES_RS12155	SM00873	B3/4 domain
PLES_RS12155	SM00874	tRNA synthetase B5 domain
PLES_RS12155	SM00896	Ferredoxin-fold anticodon binding domain
PLES_RS12160	SM00411	bacterial (prokaryotic) histone like domain
PLES_RS12165	SM00422	helix_turn_helix, mercury resistance
PLES_RS12275	SM00220	Serine/Threonine protein kinases, catalytic domain
PLES_RS12310	SM00232	JAB/MPN domain
PLES_RS12355	SM00220	Serine/Threonine protein kinases, catalytic domain
PLES_RS12365	SM00382	ATPases associated with a variety of cellular activities
PLES_RS12365	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS12400	SM00422	helix_turn_helix, mercury resistance
PLES_RS12420	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS12455	SM00382	ATPases associated with a variety of cellular activities
PLES_RS12470	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS12510	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS12555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS12555	SM00387	Histidine kinase-like ATPases
PLES_RS12555	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS12560	SM00448	cheY-homologous receiver domain
PLES_RS12560	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS12595	SM00829	Enoylreductase
PLES_RS12610	SM00382	ATPases associated with a variety of cellular activities
PLES_RS12670	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS12670	SM00382	ATPases associated with a variety of cellular activities
PLES_RS12715	SM00448	cheY-homologous receiver domain
PLES_RS12715	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS12720	SM00387	Histidine kinase-like ATPases
PLES_RS12730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS12730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS12740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS12740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS12740	SM01049	PLES_RS12740
PLES_RS12795	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS12795	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PLES_RS12800	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PLES_RS12855	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
PLES_RS12890	SM01329	PLES_RS12890
PLES_RS12895	SM00357	Cold shock protein domain
PLES_RS12905	SM00382	ATPases associated with a variety of cellular activities
PLES_RS12905	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS12910	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS12930	SM00843	PLES_RS12930
PLES_RS12940	SM00382	ATPases associated with a variety of cellular activities
PLES_RS13045	SM00421	helix_turn_helix, Lux Regulon
PLES_RS13075	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS13100	SM00974	PLES_RS13100
PLES_RS13190	SM00507	HNH nucleases
PLES_RS13340	SM00450	Rhodanese Homology Domain
PLES_RS13360	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS13375	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS13380	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS13385	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS13420	SM00822	PLES_RS13420
PLES_RS13420	SM00825	Beta-ketoacyl synthase
PLES_RS13420	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PLES_RS13440	SM00824	Thioesterase
PLES_RS13455	SM00382	ATPases associated with a variety of cellular activities
PLES_RS13490	SM00421	helix_turn_helix, Lux Regulon
PLES_RS13495	SM00965	Secretin and TonB N terminus short domain
PLES_RS13505	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS13515	SM00421	helix_turn_helix, Lux Regulon
PLES_RS13515	SM00448	cheY-homologous receiver domain
PLES_RS13520	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PLES_RS13520	SM00465	GIY-YIG type nucleases (URI domain)
PLES_RS13545	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS13580	SM00422	helix_turn_helix, mercury resistance
PLES_RS13590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS13640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS13675	SM00422	helix_turn_helix, mercury resistance
PLES_RS13710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS13710	SM00895	PLES_RS13710
PLES_RS13745	SM00953	PLES_RS13745
PLES_RS13845	SM00382	ATPases associated with a variety of cellular activities
PLES_RS13910	SM00487	DEAD-like helicases superfamily
PLES_RS13995	SM00422	helix_turn_helix, mercury resistance
PLES_RS14045	SM00422	helix_turn_helix, mercury resistance
PLES_RS14060	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PLES_RS14060	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PLES_RS14060	SM00493	PLES_RS14060
PLES_RS14120	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS14120	SM00387	Histidine kinase-like ATPases
PLES_RS14120	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS14120	SM00448	cheY-homologous receiver domain
PLES_RS14125	SM00945	ProQ/FINO family
PLES_RS14155	SM00344	helix_turn_helix ASNC type
PLES_RS14175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS14175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS14180	SM00448	cheY-homologous receiver domain
PLES_RS14185	SM00387	Histidine kinase-like ATPases
PLES_RS14210	SM00052	Putative diguanylate phosphodiesterase
PLES_RS14210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS14210	SM00267	diguanylate cyclase
PLES_RS14230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS14230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS14260	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS14270	SM00822	PLES_RS14270
PLES_RS14350	SM00195	Dual specificity phosphatase, catalytic domain
PLES_RS14360	SM00563	Phosphate acyltransferases
PLES_RS14430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS14430	SM00387	Histidine kinase-like ATPases
PLES_RS14430	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS14435	SM00448	cheY-homologous receiver domain
PLES_RS14435	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS14455	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS14495	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS14505	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PLES_RS14540	SM00364	Leucine-rich repeats, bacterial type
PLES_RS14540	SM00369	Leucine-rich repeats, typical (most populated) subfamily
PLES_RS14560	SM00248	ankyrin repeats
PLES_RS14595	SM00829	Enoylreductase
PLES_RS14605	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS14610	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS14645	SM00387	Histidine kinase-like ATPases
PLES_RS14645	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS14650	SM00448	cheY-homologous receiver domain
PLES_RS14650	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS14715	SM00965	Secretin and TonB N terminus short domain
PLES_RS14735	SM00912	haemagglutination activity domain
PLES_RS14790	SM00382	ATPases associated with a variety of cellular activities
PLES_RS14840	SM00244	prohibitin homologues
PLES_RS14845	SM00244	prohibitin homologues
PLES_RS14850	SM00244	prohibitin homologues
PLES_RS14920	SM00823	Phosphopantetheine attachment site
PLES_RS14930	SM01040	BRO family, N-terminal domain
PLES_RS14985	SM00923	MbtH-like protein
PLES_RS15005	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15040	SM00823	Phosphopantetheine attachment site
PLES_RS15045	SM00823	Phosphopantetheine attachment site
PLES_RS15050	SM00823	Phosphopantetheine attachment site
PLES_RS15050	SM00824	Thioesterase
PLES_RS15055	SM00965	Secretin and TonB N terminus short domain
PLES_RS15060	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15070	SM00965	Secretin and TonB N terminus short domain
PLES_RS15075	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15085	SM00965	Secretin and TonB N terminus short domain
PLES_RS15090	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15125	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15185	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PLES_RS15195	SM00421	helix_turn_helix, Lux Regulon
PLES_RS15195	SM00448	cheY-homologous receiver domain
PLES_RS15225	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15285	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15310	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15330	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15330	SM00930	PLES_RS15330
PLES_RS15375	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15395	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS15420	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS15435	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15480	SM00354	helix_turn _helix lactose operon repressor
PLES_RS15515	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS15535	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15565	SM00823	Phosphopantetheine attachment site
PLES_RS15565	SM00824	Thioesterase
PLES_RS15575	SM00060	Fibronectin type 3 domain
PLES_RS15575	SM00495	Chitin-binding domain type 3
PLES_RS15580	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS15580	SM00866	PLES_RS15580
PLES_RS15605	SM00382	ATPases associated with a variety of cellular activities
PLES_RS15610	SM00567	E-Z type HEAT repeats
PLES_RS15625	SM00564	beta-propeller repeat
PLES_RS15670	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS15680	SM00226	Low molecular weight phosphatase family
PLES_RS15690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS15695	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS15700	SM00829	Enoylreductase
PLES_RS15710	SM00422	helix_turn_helix, mercury resistance
PLES_RS15780	SM00354	helix_turn _helix lactose operon repressor
PLES_RS15810	SM00870	PLES_RS15810
PLES_RS15835	SM00861	Transketolase, pyrimidine binding domain
PLES_RS15845	SM00344	helix_turn_helix ASNC type
PLES_RS16080	SM00091	PAS domain
PLES_RS16080	SM00382	ATPases associated with a variety of cellular activities
PLES_RS16110	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PLES_RS16165	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS16165	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PLES_RS16185	SM00052	Putative diguanylate phosphodiesterase
PLES_RS16200	SM00829	Enoylreductase
PLES_RS16230	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS16250	SM00829	Enoylreductase
PLES_RS16290	SM01236	PLES_RS16290
PLES_RS16310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS16310	SM00091	PAS domain
PLES_RS16310	SM00387	Histidine kinase-like ATPases
PLES_RS16310	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS16310	SM00448	cheY-homologous receiver domain
PLES_RS16380	SM00642	Alpha-amylase domain
PLES_RS16390	SM00642	Alpha-amylase domain
PLES_RS16400	SM00642	Alpha-amylase domain
PLES_RS16405	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS16410	SM00829	Enoylreductase
PLES_RS16425	SM00155	Phospholipase D. Active site motifs.
PLES_RS16435	SM00642	Alpha-amylase domain
PLES_RS16440	SM00642	Alpha-amylase domain
PLES_RS16445	SM00642	Alpha-amylase domain
PLES_RS16450	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
PLES_RS16465	SM01060	PLES_RS16465
PLES_RS16495	SM00822	PLES_RS16495
PLES_RS16545	SM00052	Putative diguanylate phosphodiesterase
PLES_RS16585	SM00470	ParB-like nuclease domain
PLES_RS16620	SM00829	Enoylreductase
PLES_RS16630	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS16665	SM00796	Allophanate hydrolase subunit 1
PLES_RS16670	SM00797	Allophanate hydrolase subunit 2
PLES_RS16690	SM00822	PLES_RS16690
PLES_RS16705	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS16740	SM00965	Secretin and TonB N terminus short domain
PLES_RS16775	SM00344	helix_turn_helix ASNC type
PLES_RS16830	SM00052	Putative diguanylate phosphodiesterase
PLES_RS16830	SM00091	PAS domain
PLES_RS16830	SM00267	diguanylate cyclase
PLES_RS16835	SM00838	Elongation factor G C-terminus
PLES_RS16835	SM00889	Elongation factor G, domain IV
PLES_RS16885	SM00382	ATPases associated with a variety of cellular activities
PLES_RS16905	SM00965	Secretin and TonB N terminus short domain
PLES_RS16925	SM00947	Carbonic anhydrase
PLES_RS16930	SM01116	PLES_RS16930
PLES_RS16955	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS16965	SM01234	PLES_RS16965
PLES_RS16990	SM01230	PLES_RS16990
PLES_RS17030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS17050	SM00344	helix_turn_helix ASNC type
PLES_RS17080	SM00984	UDP binding domain
PLES_RS17115	SM00422	helix_turn_helix, mercury resistance
PLES_RS17135	SM00878	Biotin carboxylase C-terminal domain
PLES_RS17145	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS17170	SM00091	PAS domain
PLES_RS17170	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17195	SM00882	Coenzyme A transferase
PLES_RS17200	SM00882	Coenzyme A transferase
PLES_RS17235	SM00387	Histidine kinase-like ATPases
PLES_RS17235	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS17235	SM00448	cheY-homologous receiver domain
PLES_RS17250	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS17285	SM00564	beta-propeller repeat
PLES_RS17295	SM00421	helix_turn_helix, Lux Regulon
PLES_RS17295	SM00448	cheY-homologous receiver domain
PLES_RS17300	SM00387	Histidine kinase-like ATPases
PLES_RS17305	SM00421	helix_turn_helix, Lux Regulon
PLES_RS17305	SM00448	cheY-homologous receiver domain
PLES_RS17315	SM00091	PAS domain
PLES_RS17315	SM00387	Histidine kinase-like ATPases
PLES_RS17315	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS17315	SM00448	cheY-homologous receiver domain
PLES_RS17320	SM00897	FIST N domain
PLES_RS17320	SM01204	PLES_RS17320
PLES_RS17380	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17455	SM00354	helix_turn _helix lactose operon repressor
PLES_RS17465	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17475	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17530	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PLES_RS17535	SM01092	CO dehydrogenase flavoprotein C-terminal domain
PLES_RS17545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS17545	SM00091	PAS domain
PLES_RS17545	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS17650	SM00965	Secretin and TonB N terminus short domain
PLES_RS17715	SM00421	helix_turn_helix, Lux Regulon
PLES_RS17770	SM01130	PLES_RS17770
PLES_RS17775	SM00486	DNA polymerase type-B family
PLES_RS17785	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS17805	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PLES_RS17810	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS17825	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17860	SM00823	Phosphopantetheine attachment site
PLES_RS17880	SM00491	PLES_RS17880
PLES_RS17885	SM00990	PLES_RS17885
PLES_RS17905	SM00382	ATPases associated with a variety of cellular activities
PLES_RS17940	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS17955	SM00267	diguanylate cyclase
PLES_RS17960	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS17995	SM01018	B12 binding domain
PLES_RS18055	SM00829	Enoylreductase
PLES_RS18065	SM00855	Phosphoglycerate mutase family
PLES_RS18085	SM00822	PLES_RS18085
PLES_RS18140	SM00479	PLES_RS18140
PLES_RS18155	SM00849	Metallo-beta-lactamase superfamily
PLES_RS18160	SM00257	Lysin motif
PLES_RS18185	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18205	SM00411	bacterial (prokaryotic) histone like domain
PLES_RS18210	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18210	SM00464	Found in ATP-dependent protease La (LON)
PLES_RS18215	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18215	SM00994	ClpX C4-type zinc finger
PLES_RS18215	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS18230	SM00448	cheY-homologous receiver domain
PLES_RS18230	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS18235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS18235	SM00387	Histidine kinase-like ATPases
PLES_RS18235	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS18280	SM00840	PLES_RS18280
PLES_RS18330	SM00448	cheY-homologous receiver domain
PLES_RS18330	SM01012	PLES_RS18330
PLES_RS18345	SM00220	Serine/Threonine protein kinases, catalytic domain
PLES_RS18345	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS18345	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PLES_RS18360	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS18460	SM00421	helix_turn_helix, Lux Regulon
PLES_RS18465	SM00421	helix_turn_helix, Lux Regulon
PLES_RS18535	SM00506	Appr-1"-p processing enzyme
PLES_RS18605	SM00460	Transglutaminase/protease-like homologues
PLES_RS18630	SM00052	Putative diguanylate phosphodiesterase
PLES_RS18630	SM00267	diguanylate cyclase
PLES_RS18635	SM01217	PLES_RS18635
PLES_RS18700	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS18780	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18835	SM00478	endonuclease III
PLES_RS18835	SM01009	AlkA N-terminal domain
PLES_RS18855	SM01007	Class II Aldolase and Adducin N-terminal domain
PLES_RS18895	SM00463	Small MutS-related domain
PLES_RS18915	SM00220	Serine/Threonine protein kinases, catalytic domain
PLES_RS18920	SM00331	Sigma factor PP2C-like phosphatases
PLES_RS18920	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PLES_RS18955	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18960	SM00382	ATPases associated with a variety of cellular activities
PLES_RS18960	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS19005	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS19030	SM00829	Enoylreductase
PLES_RS19040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS19040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS19040	SM01358	PLES_RS19040
PLES_RS19050	SM00903	Flavin reductase like domain
PLES_RS19060	SM00450	Rhodanese Homology Domain
PLES_RS19090	SM00448	cheY-homologous receiver domain
PLES_RS19090	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS19095	SM00387	Histidine kinase-like ATPases
PLES_RS19095	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS19125	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS19140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS19140	SM00895	PLES_RS19140
PLES_RS19180	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS19195	SM00855	Phosphoglycerate mutase family
PLES_RS19220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS19220	SM00387	Histidine kinase-like ATPases
PLES_RS19220	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS19220	SM00448	cheY-homologous receiver domain
PLES_RS19230	SM00825	Beta-ketoacyl synthase
PLES_RS19235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS19235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS19260	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS19270	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PLES_RS19280	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS19295	SM00387	Histidine kinase-like ATPases
PLES_RS19330	SM00881	CoA binding domain
PLES_RS19350	SM00861	Transketolase, pyrimidine binding domain
PLES_RS19405	SM00479	PLES_RS19405
PLES_RS19450	SM01230	PLES_RS19450
PLES_RS19475	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS19555	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS19565	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS19565	SM00419	helix_turn_helix, cAMP Regulatory protein
PLES_RS19600	SM00822	PLES_RS19600
PLES_RS19615	SM00493	PLES_RS19615
PLES_RS19625	SM00382	ATPases associated with a variety of cellular activities
PLES_RS19640	SM00292	breast cancer carboxy-terminal domain
PLES_RS19640	SM00532	Ligase N family
PLES_RS19645	SM00771	ZipA, C-terminal domain (FtsZ-binding)
PLES_RS19650	SM00968	SMC proteins Flexible Hinge Domain
PLES_RS19655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS19665	SM01092	CO dehydrogenase flavoprotein C-terminal domain
PLES_RS19670	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PLES_RS19705	SM00825	Beta-ketoacyl synthase
PLES_RS19725	SM00965	Secretin and TonB N terminus short domain
PLES_RS19755	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS19815	SM00421	helix_turn_helix, Lux Regulon
PLES_RS19840	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS19855	SM00382	ATPases associated with a variety of cellular activities
PLES_RS19865	SM00870	PLES_RS19865
PLES_RS19870	SM00387	Histidine kinase-like ATPases
PLES_RS19870	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS19875	SM00382	ATPases associated with a variety of cellular activities
PLES_RS19875	SM00448	cheY-homologous receiver domain
PLES_RS19895	SM01091	Transporter associated domain
PLES_RS19900	SM00822	PLES_RS19900
PLES_RS19915	SM00477	DNA/RNA non-specific endonuclease
PLES_RS19915	SM00892	DNA/RNA non-specific endonuclease
PLES_RS20040	SM00965	Secretin and TonB N terminus short domain
PLES_RS20080	SM00341	Helicase and RNase D C-terminal
PLES_RS20080	SM00474	3'-5' exonuclease
PLES_RS20090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS20090	SM00895	PLES_RS20090
PLES_RS20165	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS20240	SM00420	helix_turn_helix, Deoxyribose operon repressor
PLES_RS20240	SM01134	PLES_RS20240
PLES_RS20270	SM00421	helix_turn_helix, Lux Regulon
PLES_RS20280	SM00028	Tetratricopeptide repeats
PLES_RS20320	SM00382	ATPases associated with a variety of cellular activities
PLES_RS20375	SM00260	Two component signalling adaptor domain
PLES_RS20380	SM00260	Two component signalling adaptor domain
PLES_RS20400	SM00448	cheY-homologous receiver domain
PLES_RS20405	SM00073	Histidine Phosphotransfer domain
PLES_RS20405	SM00260	Two component signalling adaptor domain
PLES_RS20405	SM00387	Histidine kinase-like ATPases
PLES_RS20405	SM01231	PLES_RS20405
PLES_RS20415	SM00448	cheY-homologous receiver domain
PLES_RS20430	SM00382	ATPases associated with a variety of cellular activities
PLES_RS20430	SM00962	SRP54-type protein, GTPase domain
PLES_RS20505	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS20505	SM00387	Histidine kinase-like ATPases
PLES_RS20505	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS20510	SM00448	cheY-homologous receiver domain
PLES_RS20510	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS20530	SM00052	Putative diguanylate phosphodiesterase
PLES_RS20530	SM00267	diguanylate cyclase
PLES_RS20530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS20545	SM00421	helix_turn_helix, Lux Regulon
PLES_RS20550	SM00831	Cation transporter/ATPase, N-terminus
PLES_RS20565	SM00382	ATPases associated with a variety of cellular activities
PLES_RS20575	SM01144	PLES_RS20575
PLES_RS20580	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS20580	SM00091	PAS domain
PLES_RS20580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS20620	SM00849	Metallo-beta-lactamase superfamily
PLES_RS20690	SM00878	Biotin carboxylase C-terminal domain
PLES_RS20705	SM00421	helix_turn_helix, Lux Regulon
PLES_RS20705	SM00448	cheY-homologous receiver domain
PLES_RS20710	SM00387	Histidine kinase-like ATPases
PLES_RS20710	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS20710	SM00448	cheY-homologous receiver domain
PLES_RS20725	SM00450	Rhodanese Homology Domain
PLES_RS20760	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS20785	SM00855	Phosphoglycerate mutase family
PLES_RS20840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS20840	SM00895	PLES_RS20840
PLES_RS20875	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS20885	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS20890	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS20910	SM00382	ATPases associated with a variety of cellular activities
PLES_RS20920	SM01130	PLES_RS20920
PLES_RS20935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS20935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS20945	SM00235	Zinc-dependent metalloprotease
PLES_RS20960	SM00382	ATPases associated with a variety of cellular activities
PLES_RS20975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS20975	SM00091	PAS domain
PLES_RS20975	SM00387	Histidine kinase-like ATPases
PLES_RS20975	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS20975	SM00448	cheY-homologous receiver domain
PLES_RS21000	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS21030	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS21065	SM00925	MltA specific insert domain
PLES_RS21135	SM00450	Rhodanese Homology Domain
PLES_RS21200	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21300	SM00271	DnaJ molecular chaperone homology domain
PLES_RS21310	SM00731	SprT homologues.
PLES_RS21345	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS21350	SM00052	Putative diguanylate phosphodiesterase
PLES_RS21350	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS21350	SM00091	PAS domain
PLES_RS21350	SM00267	diguanylate cyclase
PLES_RS21355	SM00387	Histidine kinase-like ATPases
PLES_RS21355	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS21360	SM00448	cheY-homologous receiver domain
PLES_RS21360	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS21385	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS21460	SM00357	Cold shock protein domain
PLES_RS21465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS21465	SM00387	Histidine kinase-like ATPases
PLES_RS21465	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS21470	SM00448	cheY-homologous receiver domain
PLES_RS21470	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS21485	SM01321	PLES_RS21485
PLES_RS21540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS21540	SM00866	PLES_RS21540
PLES_RS21565	SM00829	Enoylreductase
PLES_RS21570	SM00421	helix_turn_helix, Lux Regulon
PLES_RS21630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS21650	SM00267	diguanylate cyclase
PLES_RS21650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS21670	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS21685	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21710	SM00363	S4 RNA-binding domain
PLES_RS21715	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS21725	SM00267	diguanylate cyclase
PLES_RS21740	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21765	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21765	SM00448	cheY-homologous receiver domain
PLES_RS21770	SM00091	PAS domain
PLES_RS21770	SM00387	Histidine kinase-like ATPases
PLES_RS21770	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS21775	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21835	SM00047	Lysozyme subfamily 2
PLES_RS21905	SM00382	ATPases associated with a variety of cellular activities
PLES_RS21910	SM00382	ATPases associated with a variety of cellular activities
PLES_RS22040	SM00491	PLES_RS22040
PLES_RS22090	SM00769	Water Stress and Hypersensitive response
PLES_RS22115	SM00953	PLES_RS22115
PLES_RS22150	SM00822	PLES_RS22150
PLES_RS22185	SM00881	CoA binding domain
PLES_RS22200	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS22220	SM00849	Metallo-beta-lactamase superfamily
PLES_RS22230	SM01130	PLES_RS22230
PLES_RS22280	SM00849	Metallo-beta-lactamase superfamily
PLES_RS22395	SM00382	ATPases associated with a variety of cellular activities
PLES_RS22400	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PLES_RS22425	SM00357	Cold shock protein domain
PLES_RS22525	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS22570	SM00954	Region found in RelA / SpoT proteins
PLES_RS22590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS22590	SM00387	Histidine kinase-like ATPases
PLES_RS22590	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS22595	SM00448	cheY-homologous receiver domain
PLES_RS22595	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS22600	SM00073	Histidine Phosphotransfer domain
PLES_RS22600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS22600	SM00387	Histidine kinase-like ATPases
PLES_RS22600	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS22600	SM00448	cheY-homologous receiver domain
PLES_RS22665	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS22680	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS22680	SM00924	MgtE intracellular N domain
PLES_RS22715	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS22745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PLES_RS22795	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS22800	SM00382	ATPases associated with a variety of cellular activities
PLES_RS22820	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS22895	SM00091	PAS domain
PLES_RS22895	SM00382	ATPases associated with a variety of cellular activities
PLES_RS22940	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS22950	SM00829	Enoylreductase
PLES_RS22960	SM00052	Putative diguanylate phosphodiesterase
PLES_RS22960	SM00091	PAS domain
PLES_RS22960	SM00267	diguanylate cyclase
PLES_RS22965	SM00382	ATPases associated with a variety of cellular activities
PLES_RS22975	SM00450	Rhodanese Homology Domain
PLES_RS23030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS23030	SM00091	PAS domain
PLES_RS23030	SM00267	diguanylate cyclase
PLES_RS23030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS23095	SM00563	Phosphate acyltransferases
PLES_RS23105	SM00849	Metallo-beta-lactamase superfamily
PLES_RS23200	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS23240	SM00990	PLES_RS23240
PLES_RS23320	SM00644	PLES_RS23320
PLES_RS23360	SM00487	DEAD-like helicases superfamily
PLES_RS23360	SM00490	helicase superfamily c-terminal domain
PLES_RS23370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS23370	SM00895	PLES_RS23370
PLES_RS23400	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS23460	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS23465	SM00382	ATPases associated with a variety of cellular activities
PLES_RS23465	SM00464	Found in ATP-dependent protease La (LON)
PLES_RS23510	SM00358	Double-stranded RNA binding motif
PLES_RS23510	SM00535	Ribonuclease III family
PLES_RS23530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PLES_RS23580	SM00387	Histidine kinase-like ATPases
PLES_RS23580	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS23585	SM00448	cheY-homologous receiver domain
PLES_RS23585	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS23615	SM00986	Uracil DNA glycosylase superfamily
PLES_RS23615	SM00987	UreE urease accessory protein, C-terminal domain 
PLES_RS23625	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS23665	SM00849	Metallo-beta-lactamase superfamily
PLES_RS23710	SM00363	S4 RNA-binding domain
PLES_RS23800	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS23845	SM00560	LamG-like jellyroll fold domain
PLES_RS23860	SM00912	haemagglutination activity domain
PLES_RS23880	SM00382	ATPases associated with a variety of cellular activities
PLES_RS23940	SM00965	Secretin and TonB N terminus short domain
PLES_RS23965	SM00481	DNA polymerase alpha chain like domain
PLES_RS24030	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS24040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS24055	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS24055	SM00091	PAS domain
PLES_RS24055	SM00387	Histidine kinase-like ATPases
PLES_RS24055	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS24070	SM00421	helix_turn_helix, Lux Regulon
PLES_RS24070	SM00448	cheY-homologous receiver domain
PLES_RS24115	SM00858	PLES_RS24115
PLES_RS24125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS24125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS24160	SM00479	PLES_RS24160
PLES_RS24190	SM00382	ATPases associated with a variety of cellular activities
PLES_RS24240	SM00267	diguanylate cyclase
PLES_RS24275	SM00155	Phospholipase D. Active site motifs.
PLES_RS24280	SM00867	YceI-like domain 
PLES_RS24285	SM00346	helix_turn_helix isocitrate lyase regulation
PLES_RS24305	SM00867	YceI-like domain 
PLES_RS24320	SM00849	Metallo-beta-lactamase superfamily
PLES_RS24335	SM00563	Phosphate acyltransferases
PLES_RS24350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PLES_RS24375	SM00899	PLES_RS24375
PLES_RS24420	SM00052	Putative diguanylate phosphodiesterase
PLES_RS24420	SM00267	diguanylate cyclase
PLES_RS24485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS24485	SM00387	Histidine kinase-like ATPases
PLES_RS24485	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS24490	SM00448	cheY-homologous receiver domain
PLES_RS24490	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS24520	SM00883	Chaperonin 10 Kd subunit
PLES_RS24535	SM00822	PLES_RS24535
PLES_RS24570	SM00267	diguanylate cyclase
PLES_RS24570	SM00448	cheY-homologous receiver domain
PLES_RS24580	SM00091	PAS domain
PLES_RS24580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS24580	SM00387	Histidine kinase-like ATPases
PLES_RS24580	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS24605	SM00957	SecA DEAD-like domain
PLES_RS24605	SM00958	SecA preprotein cross-linking domain
PLES_RS24625	SM00864	Tubulin/FtsZ family, GTPase domain
PLES_RS24625	SM00865	Tubulin/FtsZ family, C-terminal domain
PLES_RS24630	SM00842	Cell division protein FtsA
PLES_RS24720	SM00749	bacterial OsmY and nodulation domain
PLES_RS24770	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS24820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PLES_RS24870	SM00382	ATPases associated with a variety of cellular activities
PLES_RS24875	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS24895	SM00382	ATPases associated with a variety of cellular activities
PLES_RS24975	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS25010	SM00845	GatB domain
PLES_RS25035	SM01359	PLES_RS25035
PLES_RS25035	SM01360	PLES_RS25035
PLES_RS25055	SM00448	cheY-homologous receiver domain
PLES_RS25060	SM00387	Histidine kinase-like ATPases
PLES_RS25060	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS25085	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS25115	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25120	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25130	SM00344	helix_turn_helix ASNC type
PLES_RS25135	SM00797	Allophanate hydrolase subunit 2
PLES_RS25140	SM00796	Allophanate hydrolase subunit 1
PLES_RS25165	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
PLES_RS25170	SM00671	Sel1-like repeats.
PLES_RS25190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS25190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS25200	SM00644	PLES_RS25200
PLES_RS25305	SM00912	haemagglutination activity domain
PLES_RS25325	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25325	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS25350	SM00091	PAS domain
PLES_RS25350	SM00387	Histidine kinase-like ATPases
PLES_RS25350	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS25355	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25355	SM00448	cheY-homologous receiver domain
PLES_RS25425	SM00904	Riboflavin kinase
PLES_RS25445	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PLES_RS25525	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25535	SM00244	prohibitin homologues
PLES_RS25565	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PLES_RS25595	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25600	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25635	SM00052	Putative diguanylate phosphodiesterase
PLES_RS25635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS25635	SM00091	PAS domain
PLES_RS25635	SM00267	diguanylate cyclase
PLES_RS25650	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PLES_RS25675	SM00382	ATPases associated with a variety of cellular activities
PLES_RS25690	SM00248	ankyrin repeats
PLES_RS25695	SM01060	PLES_RS25695
PLES_RS25765	SM00912	haemagglutination activity domain
PLES_RS25805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS25805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS25890	SM00972	Spore Coat Protein U domain
PLES_RS25895	SM00972	Spore Coat Protein U domain
PLES_RS25900	SM00972	Spore Coat Protein U domain
PLES_RS25915	SM00972	Spore Coat Protein U domain
PLES_RS25945	SM00422	helix_turn_helix, mercury resistance
PLES_RS25975	SM00937	PLES_RS25975
PLES_RS25985	SM00028	Tetratricopeptide repeats
PLES_RS26005	SM01400	PLES_RS26005
PLES_RS26030	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS26040	SM00947	Carbonic anhydrase
PLES_RS26205	SM00100	Cyclic nucleotide-monophosphate binding domain
PLES_RS26215	SM00382	ATPases associated with a variety of cellular activities
PLES_RS26315	SM00091	PAS domain
PLES_RS26315	SM00387	Histidine kinase-like ATPases
PLES_RS26315	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS26320	SM00382	ATPases associated with a variety of cellular activities
PLES_RS26320	SM00448	cheY-homologous receiver domain
PLES_RS26385	SM00749	bacterial OsmY and nodulation domain
PLES_RS26390	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS26390	SM00322	K homology RNA-binding domain
PLES_RS26395	SM01387	PLES_RS26395
PLES_RS26415	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS26455	SM00382	ATPases associated with a variety of cellular activities
PLES_RS26465	SM01103	PLES_RS26465
PLES_RS26480	SM00851	MGS-like domain
PLES_RS26480	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PLES_RS26490	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PLES_RS26500	SM00271	DnaJ molecular chaperone homology domain
PLES_RS26545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS26545	SM00895	PLES_RS26545
PLES_RS26580	SM00448	cheY-homologous receiver domain
PLES_RS26580	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS26585	SM00387	Histidine kinase-like ATPases
PLES_RS26585	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS26590	SM00422	helix_turn_helix, mercury resistance
PLES_RS26605	SM00090	RIO-like kinase
PLES_RS26610	SM00448	cheY-homologous receiver domain
PLES_RS26610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS26625	SM00344	helix_turn_helix ASNC type
PLES_RS26640	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS26735	SM00421	helix_turn_helix, Lux Regulon
PLES_RS26770	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PLES_RS26840	SM00831	Cation transporter/ATPase, N-terminus
PLES_RS26875	SM00822	PLES_RS26875
PLES_RS26930	SM00267	diguanylate cyclase
PLES_RS26930	SM00448	cheY-homologous receiver domain
PLES_RS26935	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS26955	SM00878	Biotin carboxylase C-terminal domain
PLES_RS26985	SM00798	AICARFT/IMPCHase bienzyme
PLES_RS26985	SM00851	MGS-like domain
PLES_RS26990	SM01209	PLES_RS26990
PLES_RS26990	SM01210	PLES_RS26990
PLES_RS26995	SM00387	Histidine kinase-like ATPases
PLES_RS26995	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS26995	SM00448	cheY-homologous receiver domain
PLES_RS27025	SM00382	ATPases associated with a variety of cellular activities
PLES_RS27105	SM00422	helix_turn_helix, mercury resistance
PLES_RS27105	SM00871	Bacterial transcription activator, effector binding domain
PLES_RS27140	SM00448	cheY-homologous receiver domain
PLES_RS27140	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS27145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS27145	SM00387	Histidine kinase-like ATPases
PLES_RS27145	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS27170	SM00988	UreE urease accessory protein, N-terminal domain
PLES_RS27180	SM00382	ATPases associated with a variety of cellular activities
PLES_RS27200	SM00965	Secretin and TonB N terminus short domain
PLES_RS27245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS27245	SM00895	PLES_RS27245
PLES_RS27250	SM00822	PLES_RS27250
PLES_RS27260	SM00382	ATPases associated with a variety of cellular activities
PLES_RS27265	SM00382	ATPases associated with a variety of cellular activities
PLES_RS27290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS27290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS27335	SM00257	Lysin motif
PLES_RS27345	SM00460	Transglutaminase/protease-like homologues
PLES_RS27355	SM00729	Elongator protein 3, MiaB family, Radical SAM
PLES_RS27360	SM00267	diguanylate cyclase
PLES_RS27365	SM01005	Alanine racemase, C-terminal domain
PLES_RS27395	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PLES_RS27400	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS27400	SM00357	Cold shock protein domain
PLES_RS27400	SM00955	PLES_RS27400
PLES_RS27415	SM00788	Adenylosuccinate synthetase
PLES_RS27430	SM00244	prohibitin homologues
PLES_RS27435	SM00244	prohibitin homologues
PLES_RS27455	SM00853	MutL C terminal dimerisation domain
PLES_RS27455	SM01340	PLES_RS27455
PLES_RS27460	SM00257	Lysin motif
PLES_RS27460	SM00646	PLES_RS27460
PLES_RS27480	SM00479	PLES_RS27480
PLES_RS27505	SM00450	Rhodanese Homology Domain
PLES_RS27520	SM00052	Putative diguanylate phosphodiesterase
PLES_RS27520	SM00267	diguanylate cyclase
PLES_RS27545	SM00434	DNA Topoisomerase IV
PLES_RS27560	SM00387	Histidine kinase-like ATPases
PLES_RS27560	SM00433	TopoisomeraseII
PLES_RS27615	SM00881	CoA binding domain
PLES_RS27635	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS27635	SM00387	Histidine kinase-like ATPases
PLES_RS27635	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS27635	SM00448	cheY-homologous receiver domain
PLES_RS27640	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS27645	SM00448	cheY-homologous receiver domain
PLES_RS27645	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS27665	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS27720	SM00382	ATPases associated with a variety of cellular activities
PLES_RS27820	SM00052	Putative diguanylate phosphodiesterase
PLES_RS27820	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PLES_RS27820	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS27820	SM00091	PAS domain
PLES_RS27820	SM00267	diguanylate cyclase
PLES_RS27840	SM01091	Transporter associated domain
PLES_RS27895	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS27935	SM00965	Secretin and TonB N terminus short domain
PLES_RS27955	SM00842	Cell division protein FtsA
PLES_RS27965	SM00919	Malic enzyme, NAD binding domain
PLES_RS27965	SM01274	PLES_RS27965
PLES_RS27975	SM00318	Staphylococcal nuclease homologues
PLES_RS27985	SM00487	DEAD-like helicases superfamily
PLES_RS27985	SM00490	helicase superfamily c-terminal domain
PLES_RS27990	SM00836	DALR anticodon binding domain
PLES_RS27990	SM01016	Arginyl tRNA synthetase N terminal dom
PLES_RS28005	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28005	SM01086	C-terminal, D2-small domain, of ClpB protein
PLES_RS28095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PLES_RS28095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS28095	SM01358	PLES_RS28095
PLES_RS28105	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28115	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS28115	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PLES_RS28145	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS28165	SM00671	Sel1-like repeats.
PLES_RS28170	SM00671	Sel1-like repeats.
PLES_RS28175	SM00155	Phospholipase D. Active site motifs.
PLES_RS28200	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS28255	SM00866	PLES_RS28255
PLES_RS28290	SM00869	Autotransporter beta-domain
PLES_RS28310	SM00422	helix_turn_helix, mercury resistance
PLES_RS28320	SM00981	PLES_RS28320
PLES_RS28325	SM01230	PLES_RS28325
PLES_RS28350	SM00091	PAS domain
PLES_RS28350	SM00387	Histidine kinase-like ATPases
PLES_RS28350	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS28355	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28355	SM00448	cheY-homologous receiver domain
PLES_RS28380	SM00450	Rhodanese Homology Domain
PLES_RS28405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PLES_RS28405	SM00245	tail specific protease
PLES_RS28420	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS28480	SM00478	endonuclease III
PLES_RS28510	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28515	SM00062	Bacterial periplasmic substrate-binding proteins
PLES_RS28535	SM00347	helix_turn_helix multiple antibiotic resistance protein
PLES_RS28580	SM00387	Histidine kinase-like ATPases
PLES_RS28580	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS28585	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28585	SM00448	cheY-homologous receiver domain
PLES_RS28625	SM00825	Beta-ketoacyl synthase
PLES_RS28645	SM00257	Lysin motif
PLES_RS28680	SM00830	Chorismate mutase type II
PLES_RS28735	SM00363	S4 RNA-binding domain
PLES_RS28755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS28755	SM00387	Histidine kinase-like ATPases
PLES_RS28755	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS28760	SM00448	cheY-homologous receiver domain
PLES_RS28760	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS28765	SM00316	Ribosomal protein S1-like RNA-binding domain
PLES_RS28765	SM00732	Likely ribonuclease with RNase H fold.
PLES_RS28805	SM01118	PLES_RS28805
PLES_RS28810	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28880	SM01011	Aminopeptidase P, N-terminal domain
PLES_RS28915	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28930	SM00829	Enoylreductase
PLES_RS28955	SM00357	Cold shock protein domain
PLES_RS28955	SM00382	ATPases associated with a variety of cellular activities
PLES_RS28955	SM00959	Rho termination factor, N-terminal domain
PLES_RS28975	SM01004	Delta-aminolevulinic acid dehydratase
PLES_RS29020	SM00382	ATPases associated with a variety of cellular activities
PLES_RS29070	SM00448	cheY-homologous receiver domain
PLES_RS29070	SM00850	LytTr DNA-binding domain
PLES_RS29140	SM01219	PLES_RS29140
PLES_RS29180	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS29205	SM00938	Nitrogen regulatory protein P-II
PLES_RS29215	SM00382	ATPases associated with a variety of cellular activities
PLES_RS29240	SM00052	Putative diguanylate phosphodiesterase
PLES_RS29240	SM00267	diguanylate cyclase
PLES_RS29270	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS29275	SM01005	Alanine racemase, C-terminal domain
PLES_RS29305	SM00344	helix_turn_helix ASNC type
PLES_RS29315	SM00155	Phospholipase D. Active site motifs.
PLES_RS29385	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS29445	SM00072	Guanylate kinase homologues.
PLES_RS29450	SM01409	PLES_RS29450
PLES_RS29455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PLES_RS29455	SM00954	Region found in RelA / SpoT proteins
PLES_RS29475	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS29490	SM00487	DEAD-like helicases superfamily
PLES_RS29490	SM00490	helicase superfamily c-terminal domain
PLES_RS29505	SM00411	bacterial (prokaryotic) histone like domain
PLES_RS29545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS29545	SM00895	PLES_RS29545
PLES_RS29565	SM00448	cheY-homologous receiver domain
PLES_RS29565	SM00862	Transcriptional regulatory protein, C terminal
PLES_RS29570	SM00091	PAS domain
PLES_RS29570	SM00387	Histidine kinase-like ATPases
PLES_RS29570	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS29575	SM00116	Domain in cystathionine beta-synthase and other proteins.
PLES_RS29575	SM01091	Transporter associated domain
PLES_RS29585	SM00448	cheY-homologous receiver domain
PLES_RS29595	SM00382	ATPases associated with a variety of cellular activities
PLES_RS29670	SM00382	ATPases associated with a variety of cellular activities
PLES_RS29690	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS29735	SM00342	helix_turn_helix, arabinose operon control protein
PLES_RS29760	SM00155	Phospholipase D. Active site motifs.
PLES_RS29775	SM00989	PLES_RS29775
PLES_RS29790	SM00893	Electron transfer flavoprotein domain
PLES_RS29795	SM00893	Electron transfer flavoprotein domain
PLES_RS29805	SM00530	Helix-turn-helix XRE-family like proteins 
PLES_RS29920	SM01001	AIR carboxylase
PLES_RS29925	SM00829	Enoylreductase
PLES_RS29945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS29970	SM00878	Biotin carboxylase C-terminal domain
PLES_RS30010	SM00052	Putative diguanylate phosphodiesterase
PLES_RS30010	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PLES_RS30010	SM00091	PAS domain
PLES_RS30010	SM00267	diguanylate cyclase
PLES_RS30050	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30215	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30215	SM00448	cheY-homologous receiver domain
PLES_RS30220	SM00091	PAS domain
PLES_RS30220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PLES_RS30220	SM00387	Histidine kinase-like ATPases
PLES_RS30220	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS30225	SM00644	PLES_RS30225
PLES_RS30235	SM00267	diguanylate cyclase
PLES_RS30265	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PLES_RS30265	SM00474	3'-5' exonuclease
PLES_RS30265	SM00475	5'-3' exonuclease
PLES_RS30265	SM00482	DNA polymerase A domain
PLES_RS30300	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30315	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30315	SM00930	PLES_RS30315
PLES_RS30340	SM01230	PLES_RS30340
PLES_RS30355	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30355	SM00448	cheY-homologous receiver domain
PLES_RS30360	SM00387	Histidine kinase-like ATPases
PLES_RS30360	SM00388	His Kinase A (phosphoacceptor) domain
PLES_RS30410	SM00822	PLES_RS30410
PLES_RS30415	SM01230	PLES_RS30415
PLES_RS30425	SM00822	PLES_RS30425
PLES_RS30430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PLES_RS30430	SM00895	PLES_RS30430
PLES_RS30440	SM00860	SMI1 / KNR4 family
PLES_RS30445	SM00978	PLES_RS30445
PLES_RS30465	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PLES_RS30480	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PLES_RS30495	SM00646	PLES_RS30495
PLES_RS30535	SM00828	Methyltransferase  in polyketide synthase (PKS) enzymes.
PLES_RS30555	SM00420	helix_turn_helix, Deoxyribose operon repressor
PLES_RS30555	SM01134	PLES_RS30555
PLES_RS30575	SM00382	ATPases associated with a variety of cellular activities
PLES_RS30615	SM00470	ParB-like nuclease domain
PLES_RS30630	SM01228	PLES_RS30630
